Lag0017565 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0017565
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Protein TIC 214
Location	chr5: 5426005 .. 5430559 (-)
RNA-Seq Expression	Lag0017565
Synteny	Lag0017565

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAATTAACGATACTTCTTTATCTTTTGAGTTGTTCTGCCGGATCGGTCGTTCAAGACCTTTGGTCTCTACCCGGACCCGATGAAAAAAATGGGATCACTTCTTATGGACTCGTTGAGAATGATTCTGATCTAGTTCATGGCCTATTAGAAGTAGAAGGCGCTCTGTTGGGATCCTCACGGACAGAAAAAGATTGCAGTCGATTTGATAATGATCGAGTGACATTGCTTCTTCGGCCCGAACCCAGGAATCCCTTAGATATGATACAAAATGGATCTTGTTCTATCGTTGATCAGAGATTTCTCTATGAACAATACGAATCGGAGTTTGAAGAAGGGGAAGGAGAAGGAGTCCTCGACCCGCAACAGATAGAGGAGGATTTATTCAATCACATAGTTTGGGCTCCTAGAATATGGCGCCCTTGGGGCTTTCTATTTGATTGTATCGAAAGGCCCAATTCATTGGGATTTCCCTATTGGGCTAGGTCATTTCGGGGCAAGCGGATCATTTATGATGAGAATTATTAATTGGCTAGTTGTAAATAGACCCAGACTGTGGAACAAAGGATTATCCCGGACCTACACCGAGGTATTGACGGTGATTCTCAAATATCGCAGAACAGAATTTGATACGATGAGATAGAATGCAATAGAAACAAAGACACAGGGAACGGGTTACCTACTCTTAACGGTGAAAGCGAACCCTTTCATTCCGAATTAAAGAATTCGGAATGAATCAAATCTCCCCAAGTAGGATTCGAACCTACGACCAATCGGTTAACAGCCGACCGCTCTACCACTGAGCTACTGAGGAACAACGGTAAATTAGGTCTCATAGAATTCAATTCCCGTTCTCAACCCATGACCAATATGAGCTCGAGGTTTCCTTCGTAACTCCCGGAACTTCTTCGTAGTGGCTCCGTTCCATGCCTCATTTCATAGAGAACCTCAAAGTGGCTCTATTTCATTATATTCCATCCATATCCCAATTCCATTCATTTAATATCCCTGTGGTGTCATTGAGATAAGAGATGTCGTTTCTAGTCTATCTGTTTCTATTTCTATATATATGGAAAGTTAAAAAATCATCATATAATAATCCAGAAATTGCAATAGAAAAGAAAAAGGGAGGTTTGTGATGATTTTAAAATCTTTTATACTAGGTAATCTAGTATCCTTATGCATGAAGATAATCAATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACATTCTCCATAGGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCGTATCTTTTGTTTCATTTCTTCTGGAACAATCACAAACACTTTTTTGATTATGGATCTACTACCAGAAACTCAATGCGTAATCTTAGCATTCAATGTGTATTCCTGAATAATCTCATTTTTCAATTATTCAACCATTTCATTTTACCAAGTTCAATGTTAGTCAGATTAGTCAACATTTCTATGTTTCGATGCAACAACAAGATGTTATTTGTAACAAGTAGTTTTGTTGGTTGGTTAATTGGTCACATTTTATTCATGAAATGGGTTGGATTGATATTAGTCTGGATACAGCAAAATAATTCTATTAGATCTAATGTACTTATTAGATCTAATAAGTACCTTGTGTCAGAATTGAGAAATTCTATGGCTCGAATCTTTAGTATTCTCTTATTTATTACCTGTGTCTACTATTTAGGCAGAATACCGTCACCCATTGTTACTAAGAAACTGAAAGAAACCTCAGAAACGGAGGAAAGGGGGGAAAGGGGGGAAAGCGAGGAAGAAACAGATGTAGAAATAGAAACCACTTCCGAAACGAAGGGGACTAAACAGGAACAAGAGGGATCCACCGAAGAAGATACTTCTCCTTCCCTTTTTTCGGAAGAAAAGGAGGATCCGGACAAAATCGATGAAACGGAAGAGATCCGAGTGAATGGAAAGGAAAAAACAAAGGATGAATTCCACTTTAAAAGGACACGCTATCAAAATATAAAAAGACCAGTTTATGAAACCTCTTACCCTCCGGATGGAAATAAAGAAAATTCGAAGTTAGAAATAGATAAAAAAGAAAAATCTCTCTTCTGGTTTGAAAAACCTCTTGTGACTATTCTTTTCGACTATAAACGATGGAATCGTCCATTTCGATATATAAAAAATGATAAATTTGAAAATGCTGTTAGAGTTAGAACTGAAATGTCACAATATTTTTTTGCGACATGTAAAAGTGACGGAAAAGACAGAATAGTTTTTACACATCCACCTAGTGTATCAACTTTTTTTGAAATGATACAAAAAAAGATATCGTTGTTCACAACAGAAAAACTTTCTTATGATGAATTGGATAATCCTTGGAATTATCTCAATGAACAAAAAAAAATAAATTTAAACAAAAAATTGATAAAAGAATTCAAGTTCTGGATAAGGGATCCCTTACTCGAGCTCGGGATGTACTGGAAAAAAGGACTCAATTATGTAATGATAAAACTAAAAAATACTATTTACCAAAAACATATGATCCTTTATTGAGCGGACCTTACCGCAGACGAATCCATTTTTTTTTTTCATTCTCAATGATAAATGAAACTTCTATAAAAAATGATAGTGAGAACGTTTGGACAAATAAGATTCATGCTATCTTTCTTAATACTAATTACCCACAAATTGAAGATAAAATTGAGATTGAGTCAGAAGATCGAATAAAATCGTTAAAATTTTTATTCGATGCAGTTATAACTCCTTACAACGCTAAAGGAAGTCGTCAAAACTCGATTGGACTAAGAGAAATCAGTAAAAAAGTTCCTCGATGGTCATACAAATTAATCGACGATTTAGAACAACAGGAAGGAGAAAACGACGAAAGTATGGCGGAAGATCATGAAATTCGTTCAAGAAAAGCCAAACGTGTCGTAATTTTTACTGATAATCTAGAAACTAGCGATACTTATACCTTAGATACTAATAATCCTGATCAAACAGACGAAGTTGCTTTGATACGGTATTCCCAACAATCGGATTTTCATCGAGACATAATCAAAGGCTCTATGCGTGCTCAAAGACGTAAAACAGTTACTTGGAAACTGTTTCAAGGAAATGCCCATTCTTATCTTTTTTTTGAGAGACTAGACAAATCTTTTTTTTTTTCTTTTGATATTCCCCGACTAATGAAAACGCTTTTTAGACCTTGGATATGGAAAAACCCAGAATTGACTATTTCGGATAATACACAGGAAAAGACAGGCGAAAATAAGAAAGATCAGCCTTTGTCTCTGTGTTTCACATCGAGAATTCTTTGCAGATGAAGAGATGTCAAAGGGCTGCTTACTTCCCAAACAGATCTTCCTACATCTATATATAAACGCTGTTTATCAAGAATACGCAAGAAAAGCACTTCGGGTTGTTGATTCATCGCCAGAGATGGCTTAGAACCAATATTCATTATCTAATGATTTTCCGTTCTAATACTCCATCCGAGAGTTATCAGTATTTATCAAATCTGTTCTATCTAACGGAACGCTATTGGATCAAATGACAAAGACATTGTTGAGAAAAGATGGCTTTCCCGGATAAATGAAAATTGGATTCATGTAACAAGAGAAAGGTTCCCATTCCTTAGCCGGAAAAATATGTGCCATGAAATAGGGATTAAGTGAACAGAATTGACTGGGTGGTAGAGTCGTGAAAACACCAGTTTCTTCCATATTTGGACCTTAGCTCCATGGAACAATATACTACTGCTGAAACATGAAGAATTGAAATCTTAGATCAAAACATTATGTATGGATGGTAGACTATTCATCAGTGATAGTAATCCATCATTGATAGATTACATACATTGTAATTAAAGTTTATTAGTGATAGATATCTATCATTGATAGATTTGTCATATTTAAAAAAAAAATAATAAAAGTTGCTATATTTACAAATACCAAGCCTTAATTACCATCCATCACAAAAATCTTAATTTTTTTTTGAAAAATAATCCTAATAATTTTTAAAATTAAGTGGAGTTTTACATTAAAATATATATATATATATATATATATATATATACTGTTATAGGTAATTTTGGACCGTCATGATATGTAAGGAGCTGACAAGGACAACCAGGCAGGGGTAGGACCAGTGAGCATCCCAGAGGAAGACCAACCAACGGGCCAGGCTAAAATGGCTCGACCCATATGGTCGGCCTCGGCCGAGTCAAGGTCGAGGCCGACCACTTGGCCCACTTGCGCGGGCCGAGTTCGTTTACCTCCGCTCGGTCCCTACTGCCTCCAACCGCCCCAGTCCAGCCTGGTTCGTCCCGAAATGCCTCCAAATCCTACGAGCACGAGCATGTATTTATACCCCTCTTCACCACTGAAGAAGGGATCCCGAACTCTATTCTCGACTCTCTCTCTTGCTCTCTAA

mRNA sequence

ATGAAGAAATTAACGATACTTCTTTATCTTTTGAGTTGTTCTGCCGGATCGGTCGTTCAAGACCTTTGGTCTCTACCCGGACCCGATGAAAAAAATGGGATCACTTCTTATGGACTCGTTGAGAATGATTCTGATCTAGTTCATGGCCTATTAGAAGTAGAAGGCGCTCTGTTGGGATCCTCACGGACAGAAAAAGATTGCAGTCGATTTGATAATGATCGAGTGACATTGCTTCTTCGGCCCGAACCCAGGAATCCCTTAGATATGATACAAAATGGATCTTGTTCTATCGTTGATCAGAGATTTCTCTATGAACAATACGAATCGGAGTTTGAAGAAGGGGAAGGAGAAGGAGTCCTCGACCCGCAACAGATAGAGGAGGATTTATTCAATCACATAGTTTGGGCTCCTAGAATATGGCGCCCTTGGGGCTTTCTATTTGATTGTATCGAAAGGCCCAATTCATTGGGATTTCCCTATTGGGCTAGGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAGCATTGGAATACCGTCACCCATTGTTACTAAGAAACTGAAAGAAACCTCAGAAACGGAGGAAAGGGGGGAAAGGGGGGAAAGCGAGGAAGAAACAGATGTAGAAATAGAAACCACTTCCGAAACGAAGGGGACTAAACAGGAACAAGAGGGATCCACCGAAGAAGATACTTCTCCTTCCCTTTTTTCGGAAGAAAAGGAGGATCCGGACAAAATCGATGAAACGGAAGAGATCCGAGTGAATGGAAAGGAAAAAACAAAGGATGAATTCCACTTTAAAAGGACACGCTATCAAAATATAAAAAGACCAGTTTATGAAACCTCTTACCCTCCGGATGGAAATAAAGAAAATTCGAAGTTAGAAATAGATAAAAAAGAAAAATCTCTCTTCTGGTTTGAAAAACCTCTTGTGACTATTCTTTTCGACTATAAACGATGGAATCTTATAACTCCTTACAACGCTAAAGGAAGTCGTCAAAACTCGATTGGACTAAGAGAAATCAGTAAAAAAGTTCCTCGATGGTCATACAAATTAATCGACGATTTAGAACAACAGGAAGGAGAAAACGACGAAAGTATGGCGGAAGATCATGAAATTCGTTCAAGAAAAGCCAAACGTGTCGTAATTTTTACTGATAATCTAGAAACTAGCGATACTTATACCTTAGATACTAATAATCCTGATCAAACAGACGAAGTTGCTTTGATACGGTATTCCCAACAATCGGATTTTCATCGAGACATAATCAAAGGCTCTATGCGTGCTCAAAGACGAGCTGACAAGGACAACCAGGCAGGGGTAGGACCAGTGAGCATCCCAGAGGAAGACCAACCAACGGGCCAGGCTAAAATGGCTCGACCCATATGGTCGGCCTCGGCCGAGTCAAGGTCGAGGCCGACCACTTGGCCCACTTGCGCGGGCCGAGTTCGTTTACCTCCGCTCGGTCCCTACTGCCTCCAACCGCCCCAGTCCAGCCTGGTTCGTCCCGAAATGCCTCCAAATCCTACGAGCACGAGCATGTATTTATACCCCTCTTCACCACTGAAGAAGGGATCCCGAACTCTATTCTCGACTCTCTCTCTTGCTCTCTAA

Coding sequence (CDS)

ATGAAGAAATTAACGATACTTCTTTATCTTTTGAGTTGTTCTGCCGGATCGGTCGTTCAAGACCTTTGGTCTCTACCCGGACCCGATGAAAAAAATGGGATCACTTCTTATGGACTCGTTGAGAATGATTCTGATCTAGTTCATGGCCTATTAGAAGTAGAAGGCGCTCTGTTGGGATCCTCACGGACAGAAAAAGATTGCAGTCGATTTGATAATGATCGAGTGACATTGCTTCTTCGGCCCGAACCCAGGAATCCCTTAGATATGATACAAAATGGATCTTGTTCTATCGTTGATCAGAGATTTCTCTATGAACAATACGAATCGGAGTTTGAAGAAGGGGAAGGAGAAGGAGTCCTCGACCCGCAACAGATAGAGGAGGATTTATTCAATCACATAGTTTGGGCTCCTAGAATATGGCGCCCTTGGGGCTTTCTATTTGATTGTATCGAAAGGCCCAATTCATTGGGATTTCCCTATTGGGCTAGGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAGCATTGGAATACCGTCACCCATTGTTACTAAGAAACTGAAAGAAACCTCAGAAACGGAGGAAAGGGGGGAAAGGGGGGAAAGCGAGGAAGAAACAGATGTAGAAATAGAAACCACTTCCGAAACGAAGGGGACTAAACAGGAACAAGAGGGATCCACCGAAGAAGATACTTCTCCTTCCCTTTTTTCGGAAGAAAAGGAGGATCCGGACAAAATCGATGAAACGGAAGAGATCCGAGTGAATGGAAAGGAAAAAACAAAGGATGAATTCCACTTTAAAAGGACACGCTATCAAAATATAAAAAGACCAGTTTATGAAACCTCTTACCCTCCGGATGGAAATAAAGAAAATTCGAAGTTAGAAATAGATAAAAAAGAAAAATCTCTCTTCTGGTTTGAAAAACCTCTTGTGACTATTCTTTTCGACTATAAACGATGGAATCTTATAACTCCTTACAACGCTAAAGGAAGTCGTCAAAACTCGATTGGACTAAGAGAAATCAGTAAAAAAGTTCCTCGATGGTCATACAAATTAATCGACGATTTAGAACAACAGGAAGGAGAAAACGACGAAAGTATGGCGGAAGATCATGAAATTCGTTCAAGAAAAGCCAAACGTGTCGTAATTTTTACTGATAATCTAGAAACTAGCGATACTTATACCTTAGATACTAATAATCCTGATCAAACAGACGAAGTTGCTTTGATACGGTATTCCCAACAATCGGATTTTCATCGAGACATAATCAAAGGCTCTATGCGTGCTCAAAGACGAGCTGACAAGGACAACCAGGCAGGGGTAGGACCAGTGAGCATCCCAGAGGAAGACCAACCAACGGGCCAGGCTAAAATGGCTCGACCCATATGGTCGGCCTCGGCCGAGTCAAGGTCGAGGCCGACCACTTGGCCCACTTGCGCGGGCCGAGTTCGTTTACCTCCGCTCGGTCCCTACTGCCTCCAACCGCCCCAGTCCAGCCTGGTTCGTCCCGAAATGCCTCCAAATCCTACGAGCACGAGCATGTATTTATACCCCTCTTCACCACTGAAGAAGGGATCCCGAACTCTATTCTCGACTCTCTCTCTTGCTCTCTAA

Protein sequence

MKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLRPEPRNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGEGVLDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNSLGFPYWARALLSLPSPSSGYGRRNREESISNNRFYYGTAHDVHIDLLCASASSIGIPSPIVTKKLKETSETEERGERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFSEEKEDPDKIDETEEIRVNGKEKTKDEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEIDKKEKSLFWFEKPLVTILFDYKRWNLITPYNAKGSRQNSIGLREISKKVPRWSYKLIDDLEQQEGENDESMAEDHEIRSRKAKRVVIFTDNLETSDTYTLDTNNPDQTDEVALIRYSQQSDFHRDIIKGSMRAQRRADKDNQAGVGPVSIPEEDQPTGQAKMARPIWSASAESRSRPTTWPTCAGRVRLPPLGPYCLQPPQSSLVRPEMPPNPTSTSMYLYPSSPLKKGSRTLFSTLSLAL

Homology

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BLAST of Lag0017565 vs. NCBI nr
Match: QKX48533.1 (hypothetical chloroplast RF19 [Luffa acutangula])

HSP 1 Score: 401.7 bits (1031), Expect = 1.0e-107
Identity = 253/453 (55.85%), Postives = 254/453 (56.07%), Query Frame = 0


Query: 211 IPSPIVTKKLKETSETEERGERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS 270
           IPSPIVTKKLKETSETEERGERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS
Sbjct: 237 IPSPIVTKKLKETSETEERGERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS 296

Query: 271 EEKEDPDKIDETEEIRVNGKEKTKDEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEID 330
           EEKEDPDKIDETEEIRVNGKEKTKDEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEID
Sbjct: 297 EEKEDPDKIDETEEIRVNGKEKTKDEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEID 356

Query: 331 KKEKSLFWFEKPLVTILFDYKRWN------------------------------------ 390
           KKEKSLFWFEKPLVTILFDYKRWN                                    
Sbjct: 357 KKEKSLFWFEKPLVTILFDYKRWNRPFRYIKNDKFENAVRVRTEMSQYFFATCKSDGKDR 416

Query: 391 ------------------------------------------------------------ 450
                                                                       
Sbjct: 417 IVFTHPPSVSTFFEMIQKKISLFTTEKLSYDELDNPWNYLNEQKKINLNKKLINRIQVLD 476

Query: 451 ------------------------------------------------------------ 466
                                                                       
Sbjct: 477 KGSLTRARDVLEKRTQLCNDKTKKYYLPKTYDPLLSGPYRRRIHFFFSFSMINETSIKND 536

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BLAST of Lag0017565 vs. NCBI nr
Match: QIT04107.1 (Ycf1 protein [Luffa aegyptiaca] >QKX48619.1 hypothetical chloroplast RF19 [Luffa aegyptiaca])

HSP 1 Score: 391.7 bits (1005), Expect = 1.1e-104
Identity = 250/451 (55.43%), Postives = 251/451 (55.65%), Query Frame = 0


Query: 211 IPSPIVTKKLKETSETEERGERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS 270
           IPSPIVTKKLKETSETE   ERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS
Sbjct: 237 IPSPIVTKKLKETSETE---ERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS 296

Query: 271 EEKEDPDKIDETEEIRVNGKEKTKDEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEID 330
           EEKEDPDKIDETEEIRVNGKEKTKDEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEID
Sbjct: 297 EEKEDPDKIDETEEIRVNGKEKTKDEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEID 356

Query: 331 KKEKSLFWFEKPLVTILFDYKRWN------------------------------------ 390
           KKEKSLFWFEKPLVTILFDYKRWN                                    
Sbjct: 357 KKEKSLFWFEKPLVTILFDYKRWNRPFRYIKNEKFENAVRTEMSQYFFATCKSDGKDRIV 416

Query: 391 ------------------------------------------------------------ 450
                                                                       
Sbjct: 417 FTHPPSVSTFFEMIQKKISLFTTEKLSYDELDNPWNYLNEQKKINLNKKLINRIQVLDKG 476

Query: 451 ------------------------------------------------------------ 466
                                                                       
Sbjct: 477 SLTLARDVLEKRTQLCNDKTKKYYLPKTYDPLLSGPYRRRIHFFFSFSMINETSIKNDSE 536

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BLAST of Lag0017565 vs. NCBI nr
Match: AXR94585.1 (hypothetical protein RF1 [Hodgsonia macrocarpa])

HSP 1 Score: 384.4 bits (986), Expect = 1.7e-102
Identity = 241/411 (58.64%), Postives = 244/411 (59.37%), Query Frame = 0


Query: 211 IPSPIVTKKLKETSETEERGERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS 270
           IPSPIVTKKLKETSETE   ERGESE+ETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS
Sbjct: 237 IPSPIVTKKLKETSETE---ERGESEQETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS 296

Query: 271 EEKEDPDKIDETEEIRVNGKEKTKDEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEID 330
           EEKEDPDKIDETEEIRV GKEKTKDEFHFKRTRY NIKRPVYETSYPPDGNKEN K EID
Sbjct: 297 EEKEDPDKIDETEEIRVIGKEKTKDEFHFKRTRYPNIKRPVYETSYPPDGNKENLKFEID 356

Query: 331 KKEKSLFWFEKPLVTILFDYKRWN------------------------------------ 390
           KKEKSLFWFEKPLVTILFDYKRWN                                    
Sbjct: 357 KKEKSLFWFEKPLVTILFDYKRWNRPFRXFFEMIQKKISLFTTEKLSYDEFDNPWNYLNE 416

Query: 391 ------------------------------------------------------------ 450
                                                                       
Sbjct: 417 QKKRNLNKKFINRIQVLDKGSLTLVRDVLEKRTQLCNDKTKKYYLPKTYDPLLSGPYRKQ 476

Query: 451 ----------------------------------------------------------LI 466
                                                                     +I
Sbjct: 477 IHFFFSFSMINEISITNDSENVWTNKIHAIFLNTNYPQIAEKIESEDRIKSLKFLFDAVI 536

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BLAST of Lag0017565 vs. NCBI nr
Match: QJD26354.1 (Ycf1 [Trichosanthes kirilowii] >QJD26441.1 Ycf1 [Trichosanthes kirilowii])

HSP 1 Score: 383.3 bits (983), Expect = 3.8e-102
Identity = 248/451 (54.99%), Postives = 249/451 (55.21%), Query Frame = 0


Query: 211 IPSPIVTKKLKETSETEERGERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS 270
           IPSPIVTKKLKETSETE   ERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS
Sbjct: 237 IPSPIVTKKLKETSETE---ERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS 296

Query: 271 EEKEDPDKIDETEEIRVNGKEKTKDEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEID 330
           EEKEDPDKIDETEEIRVNGKEKTKDEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEID
Sbjct: 297 EEKEDPDKIDETEEIRVNGKEKTKDEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEID 356

Query: 331 KKEKSLFWFEKPLVTILFDYKRWN------------------------------------ 390
           KKEKSLFWFEKPLVTILFDYKRWN                                    
Sbjct: 357 KKEKSLFWFEKPLVTILFDYKRWNRPFRYIKNDKFENAVRTEMSQYFFSTCKSDGKDRIV 416

Query: 391 ------------------------------------------------------------ 450
                                                                       
Sbjct: 417 FTHPPSVSTFFEMIKKKISLFTTEKLSYDELDNPWNYLNEQKKINLNKKVINRIQVLDKG 476

Query: 451 ------------------------------------------------------------ 466
                                                                       
Sbjct: 477 SLTLARDVLEKRTQLCNDKTKKYYLPKTYDPLLSGPYRKQIHFFFSFSRINETSIKNDSE 536

[Close]

BLAST of Lag0017565 vs. NCBI nr
Match: QJD26703.1 (Ycf1 [Trichosanthes rosthornii])

HSP 1 Score: 383.3 bits (983), Expect = 3.8e-102
Identity = 248/451 (54.99%), Postives = 249/451 (55.21%), Query Frame = 0


Query: 211 IPSPIVTKKLKETSETEERGERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS 270
           IPSPIVTKKLKETSETE   ERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS
Sbjct: 237 IPSPIVTKKLKETSETE---ERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS 296

Query: 271 EEKEDPDKIDETEEIRVNGKEKTKDEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEID 330
           EEKEDPDKIDETEEIRVNGKEKTKDEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEID
Sbjct: 297 EEKEDPDKIDETEEIRVNGKEKTKDEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEID 356

Query: 331 KKEKSLFWFEKPLVTILFDYKRWN------------------------------------ 390
           KKEKSLFWFEKPLVTILFDYKRWN                                    
Sbjct: 357 KKEKSLFWFEKPLVTILFDYKRWNRPFRYIKNDKFENAVRTEMSQYFFSTCKSDGKDRIV 416

Query: 391 ------------------------------------------------------------ 450
                                                                       
Sbjct: 417 FTHPPSVSTFFEMIQKKISLFTTEKLSYDELDNPWNYLNEQKKINLNKKVLNRIQVLDKG 476

Query: 451 ------------------------------------------------------------ 466
                                                                       
Sbjct: 477 SLTLARDVLEKRTQLCNDKTKKYYLPKTYDPLLSGPYRKQIHFFFSFSRINETSIKNDSE 536

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BLAST of Lag0017565 vs. ExPASy Swiss-Prot
Match: Q0ZIV6 (Protein Ycf2 OS=Vitis vinifera OX=29760 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.3e-89
Identity = 154/164 (93.90%), Postives = 159/164 (96.95%), Query Frame = 0


Query: 1    MKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 60
            MKKLTILLYLLSCSAGSV QDLWSLPGPDEKNGITSYGLVENDSDLVHGLLEVEGAL+GS
Sbjct: 1962 MKKLTILLYLLSCSAGSVAQDLWSLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALVGS 2021

Query: 61   SRTEKDCSRFDNDRVTLLLRPEPRNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGEGVL 120
            SRTEKDCS+FDNDRVTLLLRPEPRNPLDM+QNGSCSIVDQRFLYE+YESEFEEG GEG L
Sbjct: 2022 SRTEKDCSQFDNDRVTLLLRPEPRNPLDMMQNGSCSIVDQRFLYEKYESEFEEGAGEGAL 2081

Query: 121  DPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNSLGFPYWARA 165
            DPQQIEEDLFNHIVWAPRIWRPWGFLFDCIER N LGFPYWAR+
Sbjct: 2082 DPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERTNELGFPYWARS 2125

[Close]

BLAST of Lag0017565 vs. ExPASy Swiss-Prot
Match: Q49KT6 (Protein Ycf2 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.2e-89
Identity = 154/164 (93.90%), Postives = 161/164 (98.17%), Query Frame = 0


Query: 1    MKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 60
            MKKLTILLYLLSCSAGS+ QDLWSLPGPDEKN ITSYGLVENDSDLVHGLLEVEGAL+GS
Sbjct: 1942 MKKLTILLYLLSCSAGSIAQDLWSLPGPDEKNEITSYGLVENDSDLVHGLLEVEGALVGS 2001

Query: 61   SRTEKDCSRFDNDRVTLLLRPEPRNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGEGVL 120
            SRTEKD S+FDNDRVTLLLRP+PRNPLDM+QNGSCSIVDQRFLYE+YESEFEEGEGEGVL
Sbjct: 2002 SRTEKDYSQFDNDRVTLLLRPKPRNPLDMMQNGSCSIVDQRFLYEKYESEFEEGEGEGVL 2061

Query: 121  DPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNSLGFPYWARA 165
            DPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNSLGFPYWAR+
Sbjct: 2062 DPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNSLGFPYWARS 2105

[Close]

BLAST of Lag0017565 vs. ExPASy Swiss-Prot
Match: B1A978 (Protein Ycf2 OS=Carica papaya OX=3649 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 2.9e-89
Identity = 154/164 (93.90%), Postives = 159/164 (96.95%), Query Frame = 0


Query: 1    MKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 60
            MKKLTILLYLLSCSAGSV QDLWSLPGPDEKNGITSYG VENDSDLVHGLLEVEGAL+GS
Sbjct: 1960 MKKLTILLYLLSCSAGSVAQDLWSLPGPDEKNGITSYGFVENDSDLVHGLLEVEGALVGS 2019

Query: 61   SRTEKDCSRFDNDRVTLLLRPEPRNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGEGVL 120
            SRTEKDCS+FDNDRVTLLLR EPRNPL M+QNGSCSIVDQRFLYE+YESEFEEGEGEGVL
Sbjct: 2020 SRTEKDCSQFDNDRVTLLLRSEPRNPLYMMQNGSCSIVDQRFLYEKYESEFEEGEGEGVL 2079

Query: 121  DPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNSLGFPYWARA 165
            DPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPN LGFPYWAR+
Sbjct: 2080 DPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYWARS 2123

[Close]

BLAST of Lag0017565 vs. ExPASy Swiss-Prot
Match: Q68RU4 (Protein Ycf2 OS=Panax ginseng OX=4054 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.4e-88
Identity = 152/164 (92.68%), Postives = 159/164 (96.95%), Query Frame = 0


Query: 1    MKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 60
            MKKLTILLYLLSCSAGSV QDLWSLP PDEKNGITSYGLVENDSDLVHGLLEVEGAL+GS
Sbjct: 1756 MKKLTILLYLLSCSAGSVAQDLWSLPRPDEKNGITSYGLVENDSDLVHGLLEVEGALVGS 1815

Query: 61   SRTEKDCSRFDNDRVTLLLRPEPRNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGEGVL 120
            SRTEKDCS+FDNDRVTLLLRPEPRNPLDM+QNGSCSI+DQRFLYE+ ESEFEEGEGEG L
Sbjct: 1816 SRTEKDCSQFDNDRVTLLLRPEPRNPLDMMQNGSCSILDQRFLYEKNESEFEEGEGEGAL 1875

Query: 121  DPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNSLGFPYWARA 165
            DPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPN LGFPYW+R+
Sbjct: 1876 DPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYWSRS 1919

[Close]

BLAST of Lag0017565 vs. ExPASy Swiss-Prot
Match: Q14F97 (Protein Ycf2 OS=Populus alba OX=43335 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.4e-88
Identity = 151/164 (92.07%), Postives = 160/164 (97.56%), Query Frame = 0


Query: 1    MKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 60
            MKKLTILLYLLSCSAGS+ QDLWSLPGPDEKNGIT YGLVENDSDLVHGLLEVEGAL+GS
Sbjct: 1944 MKKLTILLYLLSCSAGSIAQDLWSLPGPDEKNGITYYGLVENDSDLVHGLLEVEGALVGS 2003

Query: 61   SRTEKDCSRFDNDRVTLLLRPEPRNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGEGVL 120
            SRTEKDCS+FDNDRVTLLLRPEPR+PLDM+QNGSCSI+DQRFLYE+YESEFEEGE EG+L
Sbjct: 2004 SRTEKDCSQFDNDRVTLLLRPEPRSPLDMMQNGSCSILDQRFLYEKYESEFEEGEVEGIL 2063

Query: 121  DPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNSLGFPYWARA 165
            DPQQIEEDLFNHIVWAPRIW PWGFLFDCIERPNSLGFPYWAR+
Sbjct: 2064 DPQQIEEDLFNHIVWAPRIWSPWGFLFDCIERPNSLGFPYWARS 2107

[Close]

BLAST of Lag0017565 vs. ExPASy TrEMBL
Match: A0A7D5C1X1 (Protein TIC 214 OS=Luffa acutangula OX=56866 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 4.9e-108
Identity = 253/453 (55.85%), Postives = 254/453 (56.07%), Query Frame = 0


Query: 211 IPSPIVTKKLKETSETEERGERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS 270
           IPSPIVTKKLKETSETEERGERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS
Sbjct: 237 IPSPIVTKKLKETSETEERGERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS 296

Query: 271 EEKEDPDKIDETEEIRVNGKEKTKDEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEID 330
           EEKEDPDKIDETEEIRVNGKEKTKDEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEID
Sbjct: 297 EEKEDPDKIDETEEIRVNGKEKTKDEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEID 356

Query: 331 KKEKSLFWFEKPLVTILFDYKRWN------------------------------------ 390
           KKEKSLFWFEKPLVTILFDYKRWN                                    
Sbjct: 357 KKEKSLFWFEKPLVTILFDYKRWNRPFRYIKNDKFENAVRVRTEMSQYFFATCKSDGKDR 416

Query: 391 ------------------------------------------------------------ 450
                                                                       
Sbjct: 417 IVFTHPPSVSTFFEMIQKKISLFTTEKLSYDELDNPWNYLNEQKKINLNKKLINRIQVLD 476

Query: 451 ------------------------------------------------------------ 466
                                                                       
Sbjct: 477 KGSLTRARDVLEKRTQLCNDKTKKYYLPKTYDPLLSGPYRRRIHFFFSFSMINETSIKND 536

[Close]

BLAST of Lag0017565 vs. ExPASy TrEMBL
Match: A0A6H0EQS3 (Protein TIC 214 OS=Luffa aegyptiaca OX=3670 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 5.1e-105
Identity = 250/451 (55.43%), Postives = 251/451 (55.65%), Query Frame = 0


Query: 211 IPSPIVTKKLKETSETEERGERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS 270
           IPSPIVTKKLKETSETE   ERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS
Sbjct: 237 IPSPIVTKKLKETSETE---ERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS 296

Query: 271 EEKEDPDKIDETEEIRVNGKEKTKDEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEID 330
           EEKEDPDKIDETEEIRVNGKEKTKDEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEID
Sbjct: 297 EEKEDPDKIDETEEIRVNGKEKTKDEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEID 356

Query: 331 KKEKSLFWFEKPLVTILFDYKRWN------------------------------------ 390
           KKEKSLFWFEKPLVTILFDYKRWN                                    
Sbjct: 357 KKEKSLFWFEKPLVTILFDYKRWNRPFRYIKNEKFENAVRTEMSQYFFATCKSDGKDRIV 416

Query: 391 ------------------------------------------------------------ 450
                                                                       
Sbjct: 417 FTHPPSVSTFFEMIQKKISLFTTEKLSYDELDNPWNYLNEQKKINLNKKLINRIQVLDKG 476

Query: 451 ------------------------------------------------------------ 466
                                                                       
Sbjct: 477 SLTLARDVLEKRTQLCNDKTKKYYLPKTYDPLLSGPYRRRIHFFFSFSMINETSIKNDSE 536

[Close]

BLAST of Lag0017565 vs. ExPASy TrEMBL
Match: A0A346QNA0 (Protein TIC 214 OS=Hodgsonia macrocarpa OX=2184935 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 8.2e-103
Identity = 241/411 (58.64%), Postives = 244/411 (59.37%), Query Frame = 0


Query: 211 IPSPIVTKKLKETSETEERGERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS 270
           IPSPIVTKKLKETSETE   ERGESE+ETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS
Sbjct: 237 IPSPIVTKKLKETSETE---ERGESEQETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS 296

Query: 271 EEKEDPDKIDETEEIRVNGKEKTKDEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEID 330
           EEKEDPDKIDETEEIRV GKEKTKDEFHFKRTRY NIKRPVYETSYPPDGNKEN K EID
Sbjct: 297 EEKEDPDKIDETEEIRVIGKEKTKDEFHFKRTRYPNIKRPVYETSYPPDGNKENLKFEID 356

Query: 331 KKEKSLFWFEKPLVTILFDYKRWN------------------------------------ 390
           KKEKSLFWFEKPLVTILFDYKRWN                                    
Sbjct: 357 KKEKSLFWFEKPLVTILFDYKRWNRPFRXFFEMIQKKISLFTTEKLSYDEFDNPWNYLNE 416

Query: 391 ------------------------------------------------------------ 450
                                                                       
Sbjct: 417 QKKRNLNKKFINRIQVLDKGSLTLVRDVLEKRTQLCNDKTKKYYLPKTYDPLLSGPYRKQ 476

Query: 451 ----------------------------------------------------------LI 466
                                                                     +I
Sbjct: 477 IHFFFSFSMINEISITNDSENVWTNKIHAIFLNTNYPQIAEKIESEDRIKSLKFLFDAVI 536

[Close]

BLAST of Lag0017565 vs. ExPASy TrEMBL
Match: A0A6M3S424 (Protein TIC 214 OS=Trichosanthes kirilowii OX=3677 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 1.8e-102
Identity = 248/451 (54.99%), Postives = 249/451 (55.21%), Query Frame = 0


Query: 211 IPSPIVTKKLKETSETEERGERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS 270
           IPSPIVTKKLKETSETE   ERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS
Sbjct: 237 IPSPIVTKKLKETSETE---ERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS 296

Query: 271 EEKEDPDKIDETEEIRVNGKEKTKDEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEID 330
           EEKEDPDKIDETEEIRVNGKEKTKDEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEID
Sbjct: 297 EEKEDPDKIDETEEIRVNGKEKTKDEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEID 356

Query: 331 KKEKSLFWFEKPLVTILFDYKRWN------------------------------------ 390
           KKEKSLFWFEKPLVTILFDYKRWN                                    
Sbjct: 357 KKEKSLFWFEKPLVTILFDYKRWNRPFRYIKNDKFENAVRTEMSQYFFSTCKSDGKDRIV 416

Query: 391 ------------------------------------------------------------ 450
                                                                       
Sbjct: 417 FTHPPSVSTFFEMIKKKISLFTTEKLSYDELDNPWNYLNEQKKINLNKKVINRIQVLDKG 476

Query: 451 ------------------------------------------------------------ 466
                                                                       
Sbjct: 477 SLTLARDVLEKRTQLCNDKTKKYYLPKTYDPLLSGPYRKQIHFFFSFSRINETSIKNDSE 536

[Close]

BLAST of Lag0017565 vs. ExPASy TrEMBL
Match: A0A6M3RUB7 (Protein TIC 214 OS=Trichosanthes rosthornii OX=676073 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 1.8e-102
Identity = 248/451 (54.99%), Postives = 249/451 (55.21%), Query Frame = 0


Query: 211 IPSPIVTKKLKETSETEERGERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS 270
           IPSPIVTKKLKETSETE   ERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS
Sbjct: 237 IPSPIVTKKLKETSETE---ERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS 296

Query: 271 EEKEDPDKIDETEEIRVNGKEKTKDEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEID 330
           EEKEDPDKIDETEEIRVNGKEKTKDEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEID
Sbjct: 297 EEKEDPDKIDETEEIRVNGKEKTKDEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEID 356

Query: 331 KKEKSLFWFEKPLVTILFDYKRWN------------------------------------ 390
           KKEKSLFWFEKPLVTILFDYKRWN                                    
Sbjct: 357 KKEKSLFWFEKPLVTILFDYKRWNRPFRYIKNDKFENAVRTEMSQYFFSTCKSDGKDRIV 416

Query: 391 ------------------------------------------------------------ 450
                                                                       
Sbjct: 417 FTHPPSVSTFFEMIQKKISLFTTEKLSYDELDNPWNYLNEQKKINLNKKVLNRIQVLDKG 476

Query: 451 ------------------------------------------------------------ 466
                                                                       
Sbjct: 477 SLTLARDVLEKRTQLCNDKTKKYYLPKTYDPLLSGPYRKQIHFFFSFSRINETSIKNDSE 536

[Close]

BLAST of Lag0017565 vs. TAIR 10
Match: ATCG00860.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 303.1 bits (775), Expect = 4.6e-82
Identity = 144/162 (88.89%), Postives = 151/162 (93.21%), Query Frame = 0


Query: 1    MKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 60
            MKK TILLYLLSCSAGSV QDLWSLP PDEKN ITSYG VENDSDLVHGLLEV+GAL+GS
Sbjct: 1956 MKKFTILLYLLSCSAGSVAQDLWSLPVPDEKNRITSYGFVENDSDLVHGLLEVQGALVGS 2015

Query: 61   SRTEKDCSRFDNDRVTLLLRPEPRNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGEGVL 120
            SRTEKDCS+FDNDRVTLL R EPR+PL M+Q+GSCSIVDQRFLYE+YESEFEEGEGEGVL
Sbjct: 2016 SRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEGVL 2075

Query: 121  DPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNSLGFPYWA 163
            DPQQIEEDLFNHIVWAPRIWRP GFLFDCIERPN LGFPY A
Sbjct: 2076 DPQQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYSA 2117

[Close]

BLAST of Lag0017565 vs. TAIR 10
Match: ATCG01280.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 303.1 bits (775), Expect = 4.6e-82
Identity = 144/162 (88.89%), Postives = 151/162 (93.21%), Query Frame = 0


Query: 1    MKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 60
            MKK TILLYLLSCSAGSV QDLWSLP PDEKN ITSYG VENDSDLVHGLLEV+GAL+GS
Sbjct: 1956 MKKFTILLYLLSCSAGSVAQDLWSLPVPDEKNRITSYGFVENDSDLVHGLLEVQGALVGS 2015

Query: 61   SRTEKDCSRFDNDRVTLLLRPEPRNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGEGVL 120
            SRTEKDCS+FDNDRVTLL R EPR+PL M+Q+GSCSIVDQRFLYE+YESEFEEGEGEGVL
Sbjct: 2016 SRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEGVL 2075

Query: 121  DPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNSLGFPYWA 163
            DPQQIEEDLFNHIVWAPRIWRP GFLFDCIERPN LGFPY A
Sbjct: 2076 DPQQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYSA 2117

[Close]

BLAST of Lag0017565 vs. TAIR 10
Match: ATCG01130.1 (Ycf1 protein )

HSP 1 Score: 141.0 bits (354), Expect = 3.0e-33
Identity = 152/480 (31.67%), Postives = 172/480 (35.83%), Query Frame = 0


Query: 211 IPSPIVTKKLKETSETEERGERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS 270
           IPSPI TKKLK                        TSET GTKQ+QE STEE   PSLFS
Sbjct: 243 IPSPIFTKKLK-----------------------GTSETGGTKQDQEVSTEEAPFPSLFS 302

Query: 271 EEKEDPDKIDETEEIRVNGKEKTK--DEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLE 330
           EE ED DKIDE EEIRVNGK+K    DEFH +   Y N K  V E  Y   GNKENS LE
Sbjct: 303 EEGEDLDKIDEMEEIRVNGKDKINKDDEFHVR--TYYNYK-TVSENLY---GNKENSNLE 362

Query: 331 ---IDKKEKSLFWFEKPLVTILFDYKRWNLITPY-------------------------- 390
              I KKE    WFEKP VT++FDYKRWN    Y                          
Sbjct: 363 FFKIKKKEDHFLWFEKPFVTLVFDYKRWNRPNRYIKNDKIENIVRNEMSQYFFYTCQSDG 422

Query: 391 -------------------------------------------------NAKGS------ 450
                                                            N K        
Sbjct: 423 KERISFTYPPNLSTFFEMIQKRIPSFTKEKKTFDQVSTYWSLIHEEKRENLKKEFLNRIE 482

Query: 451 ---------------------------------------------------------RQN 466
                                                                    R+N
Sbjct: 483 ALDKEWSVENILEKTTRFCYNEAKKEYLPKIYDPFLHGISRGRIKKLPPFQIITETYRKN 542

[Close]

BLAST of Lag0017565 vs. TAIR 10
Match: ATCG01000.1 (Ycf1 protein )

HSP 1 Score: 78.2 bits (191), Expect = 2.4e-14
Identity = 67/126 (53.17%), Postives = 71/126 (56.35%), Query Frame = 0


Query: 211 IPSPIVTKKLKETSETEERGERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFS 270
           IPSPI TKKLK                        TSET GTKQ+QE STEE   PSLFS
Sbjct: 243 IPSPIFTKKLK-----------------------GTSETGGTKQDQEVSTEEAPFPSLFS 302

Query: 271 EEKEDPDKIDETEEIRVNGKEKTK--DEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLE 330
           EE ED DKIDE EEIRVNGK+K    DEFH +   Y N K  V E  Y   GNKENS LE
Sbjct: 303 EEGEDLDKIDEMEEIRVNGKDKINKDDEFHVR--TYYNYK-TVSENLY---GNKENSNLE 339

Query: 331 IDKKEK 335
             K +K
Sbjct: 363 FFKIKK 339

The following BLAST results are available for this feature:

BLAST of Lag0017565 vs. NCBI nr


Match Name	E-value	Identity	Description
QKX48533.1	1.0e-107	55.85	hypothetical chloroplast RF19 [Luffa acutangula]	[more]
QIT04107.1	1.1e-104	55.43	Ycf1 protein [Luffa aegyptiaca] >QKX48619.1 hypothetical chloroplast RF19 [Luffa...	[more]
AXR94585.1	1.7e-102	58.64	hypothetical protein RF1 [Hodgsonia macrocarpa]	[more]
QJD26354.1	3.8e-102	54.99	Ycf1 [Trichosanthes kirilowii] >QJD26441.1 Ycf1 [Trichosanthes kirilowii]	[more]
QJD26703.1	3.8e-102	54.99	Ycf1 [Trichosanthes rosthornii]	[more]

BLAST of Lag0017565 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0ZIV6	1.3e-89	93.90	Protein Ycf2 OS=Vitis vinifera OX=29760 GN=ycf2-A PE=3 SV=1	[more]
Q49KT6	2.2e-89	93.90	Protein Ycf2 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ycf2-A PE=3 SV=1	[more]
B1A978	2.9e-89	93.90	Protein Ycf2 OS=Carica papaya OX=3649 GN=ycf2-A PE=3 SV=1	[more]
Q68RU4	1.4e-88	92.68	Protein Ycf2 OS=Panax ginseng OX=4054 GN=ycf2-A PE=3 SV=1	[more]
Q14F97	1.4e-88	92.07	Protein Ycf2 OS=Populus alba OX=43335 GN=ycf2-A PE=3 SV=1	[more]

BLAST of Lag0017565 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7D5C1X1	4.9e-108	55.85	Protein TIC 214 OS=Luffa acutangula OX=56866 GN=ycf1 PE=3 SV=1	[more]
A0A6H0EQS3	5.1e-105	55.43	Protein TIC 214 OS=Luffa aegyptiaca OX=3670 GN=ycf1 PE=3 SV=1	[more]
A0A346QNA0	8.2e-103	58.64	Protein TIC 214 OS=Hodgsonia macrocarpa OX=2184935 GN=ycf1 PE=3 SV=1	[more]
A0A6M3S424	1.8e-102	54.99	Protein TIC 214 OS=Trichosanthes kirilowii OX=3677 GN=ycf1 PE=3 SV=1	[more]
A0A6M3RUB7	1.8e-102	54.99	Protein TIC 214 OS=Trichosanthes rosthornii OX=676073 GN=ycf1 PE=3 SV=1	[more]

BLAST of Lag0017565 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00860.1	4.6e-82	88.89	Chloroplast Ycf2;ATPase, AAA type, core	[more]
ATCG01280.1	4.6e-82	88.89	Chloroplast Ycf2;ATPase, AAA type, core	[more]
ATCG01130.1	3.0e-33	31.67	Ycf1 protein	[more]
ATCG01000.1	2.4e-14	53.17	Ycf1 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008896	Protein TIC214	PFAM	PF05758	Ycf1	coord: 211..355 e-value: 1.9E-55 score: 188.3 coord: 356..465 e-value: 1.1E-45 score: 156.0
IPR008896	Protein TIC214	PANTHER	PTHR33163	PROTEIN TIC 214-RELATED	coord: 211..354
IPR008896	Protein TIC214	PANTHER	PTHR33163	PROTEIN TIC 214-RELATED	coord: 358..465
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..288
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 244..288
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 460..489
None	No IPR available	PANTHER	PTHR33163:SF13	PROTEIN TIC 214-RELATED	coord: 211..354
None	No IPR available	PANTHER	PTHR33163:SF13	PROTEIN TIC 214-RELATED	coord: 358..465

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0017565.1	Lag0017565.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0015267	channel activity