Lag0017554 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0017554
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr5: 5330112 .. 5334677 (+)
RNA-Seq Expression	Lag0017554
Synteny	Lag0017554

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCTCTGTCGACGCCGTCTAGGCGCGTCGGCAAAGGTCACTTCTGCCGACGCCGATCAGAAGTCTTGCTTCTCTCGACGCAAATATAAACGGCATCGAGAGAGAAGGCCTTTGCCGACGCGGTCTTCACGACGTCGGCAGAGATGGTTTGCGCGTCGGCAAAAGGTTCTTCTCCCGACGCAGTTAACGGCGTCGAGAGAAAACGCGTCGGCAAAAACAATTTTTCTTGTAGTGTTAGTTTGTAATTAGGGCTGAAAAGATGATAAATATGATAGTTTTCTACTGTATTTACTTTGTTTCTTCCTTGACTAACATGAACTAATCCTAGGATTAGGGTGCTTGTACTTGAATTAAATGTTTTGTTGATTGTGAACTCAGTGATTTTCATTTTAAAGTAAAGTGTGGTTCATTTTAATGCTAGATCTTCGTTTGGCCAACCATTCAGTGGCGGATCCAGAACTTTATGTGAGGGGGGGCTATATAGAAAATTTTAGTTTGTGCTTAAAATTGGTCCTTACCGTAAATTTAAGTTAATTTTCATCAAAAGTTGTTAAATAAAAATTTTCATACAATAAAAAACACGATGTGAACATATTTCTAAACTTTATAGAAAACATATTAATAAGACCAATTTTTTCAGAAAAAATTAACAATAAACTCACCATAGAGACCAATTTTAAACTTTATTTAAAGTACAGACTAAAATTGGACATTTCAAAGTACAATAACTAAAATGAAACAAAAGTCAAAGTACAACAACCAAAATGACGATATTTTGAACACATTGATATATGTTAATATCAATTCGTATATTTTGATATTCAATTTGTTAAATTATAAATTTAGTTATTAAGTTTTCAAGATTATGCTCAATGAATCACTAACTTTAAAAGTTTCTACTAAGTCCCTAAACTTTCACTTTTCTATCTAATAAGTTTTTGAATTTTTAAATTTTATCTAACAGAATTTTGAACTAAAAAAAAAATACATGGATTATTAGTTTATTAGATCATAGATTTATTAGACATTAAATTGAAACTTGGAAGTCTAGATACACAATTGAAAGTTTAAAATACAATAGCACTTGAAAAAAAAATCAAAACCTATTACTAAAATTAAAAAATATTTGTATTATTCCATCTTTATTTGACTCAAAAATGATAAAGAAAATTTAAAAATAAAGTTGAAAAAATAATTATAATGACTTATGTTTGCTATTATTTTATATTTATAAATAGAAAAATTAAATTTTAACTTAAACTATTTTAAACATATGAAAAAAAAAACTGAGAAAAAAGAGAAAGAAAAAACAAAAATATGAAGAGAAAAAATGAAAAAGAGTACGGAAAAAAAAAAGCAAGAAAAAAGAAACGGAGAAAAATAAAACGAAAAAGAAAAACACAAAAACAAAGACAAGCGAAAAAACAAACGGAAAAAAAATTCCAGAACTGCAGGCATGGGGCTCGAACACGGGAGTTAAAGATTACTAGGAGGGGCTTAAACCACCAGAGCACTTCAATAACATTGTTTTAAATACCGATTTTACTATATAAATAGAATATATATAGAAGTTGAGGGGGGCTCGAGCCCCCCCTGGGCCCAAGCTACCTCCGCCTCTGCAACCATTATCTAGTAGTGTTGTCATGAATTTGGGAAAAAGAGTGATAACTGATTGCTTTATTTTACATTAGCTTGATTCAAAGTAGAGGTTGCTAGTGGTAGTTTAGAAATAAACACTGACCTAATTCACAAGTCACTAGAACTTCAAAAGAGGTGGTTAAATGAGAGTTTAATCACTAAATCGAAGGAGAATTGAAATATTTCCGTAGAAAAATGCTGAGTAATCTAGAAATCACATGAGATTTGCTACAACAAAACATCTAGTGATAGTATACAACCCCTAGAGTCACTGGTTACCTTGAATTTCATTAAAAATAGGCTTATAAGTGGTAATTTTCATTGCATCAACAAGTGTGTTTGTGAGTTATTATTGCATATTTTAGAATCATTTTGCATAAGGCAACAGGAGCCCATGTTTTTTTTTATATGGACTTTTTTGTCGGCCCAATTGTTGTGTTGCTTCCTAGGAAAATTCTCAGGAGGTCACCCAACATAGAACTTCTCCAAGCTAAACACGCTTAACTTCAAAGTTCCTATGATTGAGTAACCGAAAAGGAAGGGGCACCTTGTTGGTATAGGTGATATCTATCATTTTTTTACCAACAAGGTGCATCTTCCTTTTCGGTGACTCAATCATTTCTTTTAAGCTTATCTTGACAATGTTTTAATGTCTTCAGGATCCCTCTCATTCGGATGTGATCTCAGTTCATTCATGTATCCCTGCTAACCTTCGACGTCACATGCTTAGCAGGCTAGAGAGTTGAGATTATATGAGACTTGGATTCATTCTATCCCTAGATGGATCTTTTTGTTGGTCGATTTTGACCCTTTAATTTTTTTAGTTCTACCCTTGTGGCGTAATAAAATTCTTCTAAAAAAAAATATTATACTTAAGAATGCCAAAGTGAGCATAGTTTAATGGCAATTGACAAGTATCCTCAACCAAGAGATCAGAGTTTCAAATCCCTCACTCCCAATGTTGTTTAACTCAAAAAAATATTATTGTTAAGGATTGAGATTTTTTTTTCAAAATTTGTATATAATTTTTTTGAAAGAAAAATGTGTATACAATTTTAGCTACCATTAACTTCTACCAAATAGAATTAAATGAACATGGTTGGGTATATAAACACGTGAAAACAAAAAACAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAACATTTCAATTATGTTTCTCACATGGGATGTTCTCTTGAAGTTTAGAAAGTTGATGATGCTATGTTTCTTACTTTGAAAGAAAAGTTCAAATTAAATATTTAAAAAAAAAAAACCCACATCATATATACATAATTATACAATGTTCTCTCCTTATGTGAAAGCACATTAAATTAAAATACTTCCTGTCCCATTCTTGAGAAATTAAAAAATATTACTTTATAATATTTTGGTTTATATTTTTATTTGTAATCATGAATGTTGATGCCAAAATTTGGCCAAGCAATCCACATGCCCTTCACGTGACACCAACAATGAATTTGTAGAAGCTGGGGAAGACGTGACCTGCAAGACCGGCAAGAATCGCTGGACACCGGTGTGGTGTAGGCCACACCGCCTCCGATGCCTAAGTTAGGAAACTGAGCAGCTAGAAAATAGAGAAAGAAGTCAAGAATCGAGTTTTCGGCCCCCTTCTTCGATGGCCAAGAGGGGTATAAATACCTGCTCGGACTCCTAGGGTTTGGAGGCGTTCTGGGACGAAGCAGGCTGGACCGAGGCAGCTGGAAGCGGTAGGGGCCGAGCGGGGCAAACGGACTCGGCCCGTGCAAACGGGCCGAGTGGTCGGCCTCGGCCCAAGGCCGAGGCCGACCGTACGGGTCGGGCCACGTTGGCCCGGCCCATCGGTATGGTCTGCCTCTGGGTCCCTTTCCTGGTCCTATCTCCTCCCGGTTGTCCTGTCAGCTCCTCGTATGCTGTGGTGGTCCAAAATTACCTATAACAATGAACTTTACCAATTAAGTCGTTGAGTTGAAATTTACGATTAAAAAGAAAAGAAAAAGAAAAAAAAATGAACATCTTATAGATATGAAATATGCGAAAATGAACTTACATGTAAATCTTTTGCTTAGTGAAATTTTGGTTAATTAATTATAAATAATTGATTCGTTAATTTTTATTTTTGACAAATTATTTTATTATATTTTCACTATTTAATTAAAATCATAATAATTCAATTTATCGTTTCTTTAAAAAAAAACAATTTATCGTAAATTAGGCCTCATGTTCACCAAGGGAACTATGGGAATAATGGAAGGGAAAAAAAAAGTTTTAAATATGTCTCAATATAAACCCAAAGCTCATTAGACACATTAGAGACACACATTATCATATTGGATTTTCTCAATGTTACTTTAGGAAAATTTCCAATACTACTTCCATTGATTAACAACCACGTTGACATCGTTTAAAATCTAAACACTTTTTTTATAGGTAATTTTGGACCATCTCGATATACAAGGAGCTGAGGAGGACAGTGCAATATCAGTCCAAGGAGATAACCAGGAAACGGGCCCCAGACGAAGAACAGGCCAGAGGGTCGGGCCAAGATCGGAAGGATCGGGCCTTGGCCCAACCCATATGGTCAGCCTAGGCCTTGGGCCAAGGCCGAGTCCTTCCGCCTCCGTTCGGTCCCTGGTGCCCTTGGTCGCCCCGATTTCACTTGGTTCAGCCTTGGATCACCTCCGAACGCCTAGAAACCCTAGAGCAGGAACAGGTATTTAAACCCTTCTTCAATGTGAAGAAGGGATACCGAACTCTATTCTCTGAACACTATTCCTTCTCTTGCTCTCTTCCTTCAGCTTTTGACTTAAGCATCGGAGGCGGTGTGACAAGCACCACACCGGTGTGCAGGTTTTACTGTCTTGCAGATCACGTCTTCCCCTCTCTCATACAAATTTACTGTCGGTGGCACGTGAAGGTCAGGTGA

mRNA sequence

ATGACTCTCTGTCGACGCCGTCTAGGCGCGTCGGCAAAGGTCACTTCTGCCGACGCCGATCAGAAGTCTTGCTTCTCTCGACGCAAATATAAACGGCATCGAGAGAGAAGGCCTTTGCCGACGCGGTCTTCACGACGTCGGCAGAGATGGTTTGCGCGTCGGCAAAAGGATCCCTCTCATTCGGATGTGATCTCAGTTCATTCATGTATCCCTGCTAACCTTCGACGTCACATGCTTAGCAGGCTAGAGAAAGCTGGGGAAGACGTGACCTGCAAGACCGGCAAGAATCGCTGGACACCGGGTTTGGAGGCGTTCTGGGACGAAGCAGGCTGGACCGAGGCAGCTGGAAGCGGTAGGGGCCGAGCGGGGCAAACGGACTCGGCCCGTGCAAACGGGCCGAGTGGTCGGCCTCGGCCCAAGGCCGAGGCCGACCGTACGGGTCGGGCCACGTTGGCCCGGCCCATCGGTATGGTCTGCCTCTGGGTCCCTTTCCTGGTCCTATCTCCTCCCGGTTGTCCTGTCAGCTCCTCGTATGCTGTGGTGGTAATTTTGGACCATCTCGATATACAAGGAGCTGAGGAGGACAGTGCAATATCAGTCCAAGGAGATAACCAGGAAACGGGCCCCAGACGAAGAACAGGCCAGAGGGTCGGGCCAAGATCGGAAGGATCGGGCCTTGGCCCAACCCATATGGTCAGCCTAGGCCTTGGGCCAAGGCCGAGTCCTTCCGCCTCCGTTCGGTCCCTGGTGCCCTTGGTCGCCCCGATTTCACTTGGTTCAGCCTTGGATCACCTCCGAACGCCTAGAAACCCTAGAGCAGGAACAGCTTTTGACTTAAGCATCGGAGGCGGTGTGACAAGCACCACACCGGTGTGCAGGTTTTACTGTCTTGCAGATCACGTCTTCCCCTCTCTCATACAAATTTACTGTCGGTGGCACGTGAAGGTCAGGTGA

Coding sequence (CDS)

ATGACTCTCTGTCGACGCCGTCTAGGCGCGTCGGCAAAGGTCACTTCTGCCGACGCCGATCAGAAGTCTTGCTTCTCTCGACGCAAATATAAACGGCATCGAGAGAGAAGGCCTTTGCCGACGCGGTCTTCACGACGTCGGCAGAGATGGTTTGCGCGTCGGCAAAAGGATCCCTCTCATTCGGATGTGATCTCAGTTCATTCATGTATCCCTGCTAACCTTCGACGTCACATGCTTAGCAGGCTAGAGAAAGCTGGGGAAGACGTGACCTGCAAGACCGGCAAGAATCGCTGGACACCGGGTTTGGAGGCGTTCTGGGACGAAGCAGGCTGGACCGAGGCAGCTGGAAGCGGTAGGGGCCGAGCGGGGCAAACGGACTCGGCCCGTGCAAACGGGCCGAGTGGTCGGCCTCGGCCCAAGGCCGAGGCCGACCGTACGGGTCGGGCCACGTTGGCCCGGCCCATCGGTATGGTCTGCCTCTGGGTCCCTTTCCTGGTCCTATCTCCTCCCGGTTGTCCTGTCAGCTCCTCGTATGCTGTGGTGGTAATTTTGGACCATCTCGATATACAAGGAGCTGAGGAGGACAGTGCAATATCAGTCCAAGGAGATAACCAGGAAACGGGCCCCAGACGAAGAACAGGCCAGAGGGTCGGGCCAAGATCGGAAGGATCGGGCCTTGGCCCAACCCATATGGTCAGCCTAGGCCTTGGGCCAAGGCCGAGTCCTTCCGCCTCCGTTCGGTCCCTGGTGCCCTTGGTCGCCCCGATTTCACTTGGTTCAGCCTTGGATCACCTCCGAACGCCTAGAAACCCTAGAGCAGGAACAGCTTTTGACTTAAGCATCGGAGGCGGTGTGACAAGCACCACACCGGTGTGCAGGTTTTACTGTCTTGCAGATCACGTCTTCCCCTCTCTCATACAAATTTACTGTCGGTGGCACGTGAAGGTCAGGTGA

Protein sequence

MTLCRRRLGASAKVTSADADQKSCFSRRKYKRHRERRPLPTRSSRRRQRWFARRQKDPSHSDVISVHSCIPANLRRHMLSRLEKAGEDVTCKTGKNRWTPGLEAFWDEAGWTEAAGSGRGRAGQTDSARANGPSGRPRPKAEADRTGRATLARPIGMVCLWVPFLVLSPPGCPVSSSYAVVVILDHLDIQGAEEDSAISVQGDNQETGPRRRTGQRVGPRSEGSGLGPTHMVSLGLGPRPSPSASVRSLVPLVAPISLGSALDHLRTPRNPRAGTAFDLSIGGGVTSTTPVCRFYCLADHVFPSLIQIYCRWHVKVR

Homology

The following BLAST results are available for this feature:

BLAST of Lag0017554 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0017554 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0017554 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0017554 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0017554.1	Lag0017554.1	mRNA