Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAACACTCCTTCAATTCCCAATCCCAACCCCTAACTTCCCGCCGCGTCGCAGTGATTGGCGCCGGCGCCGGTGGCCTCGTCGCCGCACGTGAGCTCGGCCGCGAGGGCCACCGTGTGGTCGTATTCGAACGGAGCGGTCAAATCGGAGGGACCTGGGTCTATTCGCCAGAAATTGAATCCGACCCGCTTGGACTCGACCCGGATCGGACCCGAATCCATAGCAGCCTCTACGAATCTCTACGCACCAATCTCCCCAGAGAAATCATGGGGTTTCGCGATTACCCGTTTGTGCCCCGAGAAGGGCCAGGTCGGGATCCGAGGCGATTTCCGGGTCATCGAGAGGTTTTGAAGTATTTGGAAGATTTTGCGAATGAATTTGGGATTTGTGAATTGGTGAGGTTTCGAACTGAGGTGGTGTTTGCTGGCTTGGGGGAGCTTGGGAAATGGAGGGTTCGATTTAGATGTGAAAGTGGGGCTGTTGATGATGAGATTTTTGATGCTGTGGTTGTTTGTGTTGGGATTCATTCACAGCCTCGAGTTGCAGAGATTCCTGGTAAAAGAAAAAAATTCTTCAGTTCAATCCAATTGTTTACTGTTTGTGTTTGTTTGTGTTTGGTTAGTTATTTGTTGA
mRNA sequence
ATGCAACACTCCTTCAATTCCCAATCCCAACCCCTAACTTCCCGCCGCGTCGCAGTGATTGGCGCCGGCGCCGGTGGCCTCGTCGCCGCACGTGAGCTCGGCCGCGAGGGCCACCGTGTGGTCGTATTCGAACGGAGCGGTCAAATCGGAGGGACCTGGGTCTATTCGCCAGAAATTGAATCCGACCCGCTTGGACTCGACCCGGATCGGACCCGAATCCATAGCAGCCTCTACGAATCTCTACGCACCAATCTCCCCAGAGAAATCATGGGGTTTCGCGATTACCCGTTTGTGCCCCGAGAAGGGCCAGGTCGGGATCCGAGGCGATTTCCGGGTCATCGAGAGGTTTTGAAGTATTTGGAAGATTTTGCGAATGAATTTGGGATTTGTGAATTGGTGAGGTTTCGAACTGAGGTGGTGTTTGCTGGCTTGGGGGAGCTTGGGAAATGGAGGGTTCGATTTAGATGTGAAAGTGGGGCTGTTGATGATGAGATTTTTGATGCTGTGGTTGTTTGTGTTGGGATTCATTCACAGCCTCGAGTTGCAGAGATTCCTGTTATTTGTTGA
Coding sequence (CDS)
ATGCAACACTCCTTCAATTCCCAATCCCAACCCCTAACTTCCCGCCGCGTCGCAGTGATTGGCGCCGGCGCCGGTGGCCTCGTCGCCGCACGTGAGCTCGGCCGCGAGGGCCACCGTGTGGTCGTATTCGAACGGAGCGGTCAAATCGGAGGGACCTGGGTCTATTCGCCAGAAATTGAATCCGACCCGCTTGGACTCGACCCGGATCGGACCCGAATCCATAGCAGCCTCTACGAATCTCTACGCACCAATCTCCCCAGAGAAATCATGGGGTTTCGCGATTACCCGTTTGTGCCCCGAGAAGGGCCAGGTCGGGATCCGAGGCGATTTCCGGGTCATCGAGAGGTTTTGAAGTATTTGGAAGATTTTGCGAATGAATTTGGGATTTGTGAATTGGTGAGGTTTCGAACTGAGGTGGTGTTTGCTGGCTTGGGGGAGCTTGGGAAATGGAGGGTTCGATTTAGATGTGAAAGTGGGGCTGTTGATGATGAGATTTTTGATGCTGTGGTTGTTTGTGTTGGGATTCATTCACAGCCTCGAGTTGCAGAGATTCCTGTTATTTGTTGA
Protein sequence
MQHSFNSQSQPLTSRRVAVIGAGAGGLVAARELGREGHRVVVFERSGQIGGTWVYSPEIESDPLGLDPDRTRIHSSLYESLRTNLPREIMGFRDYPFVPREGPGRDPRRFPGHREVLKYLEDFANEFGICELVRFRTEVVFAGLGELGKWRVRFRCESGAVDDEIFDAVVVCVGIHSQPRVAEIPVIC
Homology
BLAST of Lag0017543 vs. NCBI nr
Match:
KAG6596846.1 (Flavin-containing monooxygenase FMO GS-OX-like 3, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 340.5 bits (872), Expect = 9.2e-90
Identity = 166/187 (88.77%), Postives = 174/187 (93.05%), Query Frame = 0
Query: 1 MQHSFNSQSQPLTSRRVAVIGAGAGGLVAARELGREGHRVVVFERSGQIGGTWVYSPEIE 60
MQHS NSQSQPLTSRRVAVIGAGAGGLV+ARELGREGH VVVFERS QIGGTWVYSPEIE
Sbjct: 18 MQHSSNSQSQPLTSRRVAVIGAGAGGLVSARELGREGHSVVVFERSSQIGGTWVYSPEIE 77
Query: 61 SDPLGLDPDRTRIHSSLYESLRTNLPREIMGFRDYPFVPREGPGRDPRRFPGHREVLKYL 120
SDPLG+DP+RTRIHSSLY+SLRTNLPRE+MG RDYPFVPREG GRDPRRFP H EVLKYL
Sbjct: 78 SDPLGVDPNRTRIHSSLYKSLRTNLPRELMGVRDYPFVPREGEGRDPRRFPSHLEVLKYL 137
Query: 121 EDFANEFGICELVRFRTEVVFAGLGELGKWRVRFRCESGAVDDEIFDAVVVCVGIHSQPR 180
EDFANEFGICELVRF TEVV AGL E+GKWRVRFRCESG VDDE+FDAVVVCVG +SQPR
Sbjct: 138 EDFANEFGICELVRFGTEVVSAGLVEIGKWRVRFRCESGDVDDEMFDAVVVCVGNYSQPR 197
Query: 181 VAEIPVI 188
VAEIP I
Sbjct: 198 VAEIPGI 204
BLAST of Lag0017543 vs. NCBI nr
Match:
KAG7028376.1 (Flavin-containing monooxygenase FMO GS-OX-like 3, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 340.5 bits (872), Expect = 9.2e-90
Identity = 166/187 (88.77%), Postives = 174/187 (93.05%), Query Frame = 0
Query: 1 MQHSFNSQSQPLTSRRVAVIGAGAGGLVAARELGREGHRVVVFERSGQIGGTWVYSPEIE 60
MQHS NSQSQPLTSRRVAVIGAGAGGLV+ARELGREGH VVVFERS QIGGTWVYSPEIE
Sbjct: 1 MQHSSNSQSQPLTSRRVAVIGAGAGGLVSARELGREGHSVVVFERSSQIGGTWVYSPEIE 60
Query: 61 SDPLGLDPDRTRIHSSLYESLRTNLPREIMGFRDYPFVPREGPGRDPRRFPGHREVLKYL 120
SDPLG+DP+RTRIHSSLY+SLRTNLPRE+MG RDYPFVPREG GRDPRRFP H EVLKYL
Sbjct: 61 SDPLGVDPNRTRIHSSLYKSLRTNLPRELMGVRDYPFVPREGEGRDPRRFPSHLEVLKYL 120
Query: 121 EDFANEFGICELVRFRTEVVFAGLGELGKWRVRFRCESGAVDDEIFDAVVVCVGIHSQPR 180
EDFANEFGICELVRF TEVV AGL E+GKWRVRFRCESG VDDE+FDAVVVCVG +SQPR
Sbjct: 121 EDFANEFGICELVRFGTEVVSAGLVEIGKWRVRFRCESGDVDDEMFDAVVVCVGNYSQPR 180
Query: 181 VAEIPVI 188
VAEIP I
Sbjct: 181 VAEIPGI 187
BLAST of Lag0017543 vs. NCBI nr
Match:
XP_022942921.1 (flavin-containing monooxygenase FMO GS-OX-like 3 [Cucurbita moschata] >XP_022942929.1 flavin-containing monooxygenase FMO GS-OX-like 3 [Cucurbita moschata])
HSP 1 Score: 340.1 bits (871), Expect = 1.2e-89
Identity = 166/187 (88.77%), Postives = 174/187 (93.05%), Query Frame = 0
Query: 1 MQHSFNSQSQPLTSRRVAVIGAGAGGLVAARELGREGHRVVVFERSGQIGGTWVYSPEIE 60
MQHS NSQSQPLTSRRVAVIGAGAGGLV+ARELGREGH VVVFERS QIGGTWVYSPEIE
Sbjct: 18 MQHSSNSQSQPLTSRRVAVIGAGAGGLVSARELGREGHSVVVFERSSQIGGTWVYSPEIE 77
Query: 61 SDPLGLDPDRTRIHSSLYESLRTNLPREIMGFRDYPFVPREGPGRDPRRFPGHREVLKYL 120
SDPLG+DP+RTRIHSSLY+SLRTNLPRE+MG RDYPFVPREG GRDPRRFP H EVLKYL
Sbjct: 78 SDPLGVDPNRTRIHSSLYKSLRTNLPRELMGVRDYPFVPREGEGRDPRRFPSHLEVLKYL 137
Query: 121 EDFANEFGICELVRFRTEVVFAGLGELGKWRVRFRCESGAVDDEIFDAVVVCVGIHSQPR 180
EDFANEFGICELVRF TEVV AGL E+GKWRVRFRCESG VDDE+FDAVVVCVG +SQPR
Sbjct: 138 EDFANEFGICELVRFGTEVVSAGLVEVGKWRVRFRCESGDVDDEMFDAVVVCVGNYSQPR 197
Query: 181 VAEIPVI 188
VAEIP I
Sbjct: 198 VAEIPGI 204
BLAST of Lag0017543 vs. NCBI nr
Match:
XP_023005391.1 (flavin-containing monooxygenase FMO GS-OX-like 3 [Cucurbita maxima])
HSP 1 Score: 337.4 bits (864), Expect = 7.8e-89
Identity = 165/187 (88.24%), Postives = 173/187 (92.51%), Query Frame = 0
Query: 1 MQHSFNSQSQPLTSRRVAVIGAGAGGLVAARELGREGHRVVVFERSGQIGGTWVYSPEIE 60
MQHS NSQSQPLTSRRVAVIGAGAGGLV+ARELGREGH VVVFERS QIGGTWVY PEIE
Sbjct: 18 MQHSSNSQSQPLTSRRVAVIGAGAGGLVSARELGREGHSVVVFERSSQIGGTWVYLPEIE 77
Query: 61 SDPLGLDPDRTRIHSSLYESLRTNLPREIMGFRDYPFVPREGPGRDPRRFPGHREVLKYL 120
SDPLG+DP+RTRIHSSLY+SLRTNLPRE+MG RDYPFVPREG GRDPRRFP H EVLKYL
Sbjct: 78 SDPLGVDPNRTRIHSSLYKSLRTNLPRELMGVRDYPFVPREGEGRDPRRFPSHPEVLKYL 137
Query: 121 EDFANEFGICELVRFRTEVVFAGLGELGKWRVRFRCESGAVDDEIFDAVVVCVGIHSQPR 180
EDFANEFGIC+LVRF TEVV AGL E+GKWRVRFRCESG VDDEIFDAVVVCVG +SQPR
Sbjct: 138 EDFANEFGICKLVRFGTEVVSAGLVEVGKWRVRFRCESGDVDDEIFDAVVVCVGNYSQPR 197
Query: 181 VAEIPVI 188
VAEIP I
Sbjct: 198 VAEIPGI 204
BLAST of Lag0017543 vs. NCBI nr
Match:
XP_023539206.1 (flavin-containing monooxygenase FMO GS-OX-like 3 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 337.4 bits (864), Expect = 7.8e-89
Identity = 164/187 (87.70%), Postives = 173/187 (92.51%), Query Frame = 0
Query: 1 MQHSFNSQSQPLTSRRVAVIGAGAGGLVAARELGREGHRVVVFERSGQIGGTWVYSPEIE 60
MQH+ NSQSQPLTSRRVAVIGAGAGGLV+ARELGREGH VVVFERS QIGGTWVYSPEIE
Sbjct: 18 MQHASNSQSQPLTSRRVAVIGAGAGGLVSARELGREGHSVVVFERSSQIGGTWVYSPEIE 77
Query: 61 SDPLGLDPDRTRIHSSLYESLRTNLPREIMGFRDYPFVPREGPGRDPRRFPGHREVLKYL 120
SDPLG+DP+RTRIHSSLY+SLRTNLPRE+MG RDYPFVPREG GRDPRRFP H EVLKYL
Sbjct: 78 SDPLGVDPNRTRIHSSLYKSLRTNLPRELMGVRDYPFVPREGEGRDPRRFPSHLEVLKYL 137
Query: 121 EDFANEFGICELVRFRTEVVFAGLGELGKWRVRFRCESGAVDDEIFDAVVVCVGIHSQPR 180
EDFANEFGICELVRF TEVV AGL E+GKWRVRFRCE G VDDE+FDAVVVCVG +SQPR
Sbjct: 138 EDFANEFGICELVRFGTEVVSAGLVEVGKWRVRFRCEGGDVDDEMFDAVVVCVGNYSQPR 197
Query: 181 VAEIPVI 188
VAEIP I
Sbjct: 198 VAEIPGI 204
BLAST of Lag0017543 vs. ExPASy Swiss-Prot
Match:
Q93Y23 (Flavin-containing monooxygenase FMO GS-OX4 OS=Arabidopsis thaliana OX=3702 GN=FMOGS-OX4 PE=1 SV=1)
HSP 1 Score: 223.0 bits (567), Expect = 2.8e-57
Identity = 109/178 (61.24%), Postives = 135/178 (75.84%), Query Frame = 0
Query: 11 PLTSRRVAVIGAGAGGLVAARELGREGHRVVVFERSGQIGGTWVYSPEIESDPLGLDPDR 70
P+ S+ VAVIGAGA GLVAAREL REGH VVV +R Q+GG WVY+PE ESD LGLDP R
Sbjct: 7 PINSQHVAVIGAGAAGLVAARELRREGHTVVVLDREKQVGGLWVYTPETESDELGLDPTR 66
Query: 71 TRIHSSLYESLRTNLPREIMGFRDYPFVPR-EGPGRDPRRFPGHREVLKYLEDFANEFGI 130
+HSS+Y+SLRTNLPRE MG++D+PFVPR + P RD RR+P HREVL YL+DFA EF I
Sbjct: 67 PIVHSSVYKSLRTNLPRECMGYKDFPFVPRGDDPSRDSRRYPSHREVLAYLQDFATEFNI 126
Query: 131 CELVRFRTEVVFAGLGELGKWRVRFRCESGAVDDEIFDAVVVCVGIHSQPRVAEIPVI 188
E++RF TEV+ GKWRV+ + G +DEI+DAVV+C G ++P +A+IP I
Sbjct: 127 EEMIRFETEVLRVEPVN-GKWRVQSKTGGGFSNDEIYDAVVMCCGHFAEPNIAQIPGI 183
BLAST of Lag0017543 vs. ExPASy Swiss-Prot
Match:
A8MRX0 (Flavin-containing monooxygenase FMO GS-OX5 OS=Arabidopsis thaliana OX=3702 GN=FMOGS-OX5 PE=1 SV=2)
HSP 1 Score: 223.0 bits (567), Expect = 2.8e-57
Identity = 112/178 (62.92%), Postives = 133/178 (74.72%), Query Frame = 0
Query: 12 LTSRRVAVIGAGAGGLVAARELGREGHRVVVFERSGQIGGTWVYSPEIESDPLGLDPDRT 71
+ S VAVIGAGA GLVAAREL RE H VVVFER ++GG WVY+P E DPL LDP+RT
Sbjct: 8 VNSLNVAVIGAGAAGLVAARELRRENHTVVVFERDSKVGGLWVYTPNSEPDPLSLDPNRT 67
Query: 72 RIHSSLYESLRTNLPREIMGFRDYPFVPR--EGPGRDPRRFPGHREVLKYLEDFANEFGI 131
+HSS+Y+SLRTNLPRE MG+RD+PFVPR + RD RR+P HREVL YLEDFA EF +
Sbjct: 68 IVHSSVYDSLRTNLPRECMGYRDFPFVPRPEDDESRDSRRYPSHREVLAYLEDFAREFKL 127
Query: 132 CELVRFRTEVVFAGLGELGKWRVRFRCESGAVDDEIFDAVVVCVGIHSQPRVAEIPVI 188
E+VRF+TEVV E KWRV+ + G DEIFDAVVVC G +++PRVA +P I
Sbjct: 128 VEMVRFKTEVVLVE-PEDKKWRVQSKNSDGISKDEIFDAVVVCNGHYTEPRVAHVPGI 184
BLAST of Lag0017543 vs. ExPASy Swiss-Prot
Match:
Q9SXE1 (Flavin-containing monooxygenase FMO GS-OX3 OS=Arabidopsis thaliana OX=3702 GN=FMOGS-OX3 PE=1 SV=1)
HSP 1 Score: 221.1 bits (562), Expect = 1.1e-56
Identity = 104/177 (58.76%), Postives = 135/177 (76.27%), Query Frame = 0
Query: 12 LTSRRVAVIGAGAGGLVAARELGREGHRVVVFERSGQIGGTWVYSPEIESDPLGLDPDRT 71
+TS+ VAVIGAG GL+ +REL REGH VVVFER Q+GG WVY+P+ +SDPL LDP R+
Sbjct: 8 ITSKHVAVIGAGPAGLITSRELRREGHSVVVFEREKQVGGLWVYTPKSDSDPLSLDPTRS 67
Query: 72 RIHSSLYESLRTNLPREIMGFRDYPFVPR-EGPGRDPRRFPGHREVLKYLEDFANEFGIC 131
++HSS+YESLRTN+PRE MG RD+PF+PR + RD RR+P HREVL Y++DFA EF I
Sbjct: 68 KVHSSIYESLRTNVPRESMGVRDFPFLPRFDDESRDARRYPNHREVLAYIQDFAREFKIE 127
Query: 132 ELVRFRTEVVFAGLGELGKWRVRFRCESGAVDDEIFDAVVVCVGIHSQPRVAEIPVI 188
E++RF TEVV + G WRV+ + G ++DEI+DAVVVC G +++P +A IP I
Sbjct: 128 EMIRFETEVVRVEPVDNGNWRVQSKNSGGFLEDEIYDAVVVCNGHYTEPNIAHIPGI 184
BLAST of Lag0017543 vs. ExPASy Swiss-Prot
Match:
Q94K43 (Flavin-containing monooxygenase FMO GS-OX2 OS=Arabidopsis thaliana OX=3702 GN=FMOGS-OX2 PE=1 SV=1)
HSP 1 Score: 219.9 bits (559), Expect = 2.4e-56
Identity = 110/178 (61.80%), Postives = 130/178 (73.03%), Query Frame = 0
Query: 11 PLTSRRVAVIGAGAGGLVAARELGREGHRVVVFERSGQIGGTWVYSPEIESDPLGLDPDR 70
P++S+ V VIGAGA GLVAAREL REGH VVV ER ++GG W+YSP+ ESDPL LDP R
Sbjct: 7 PISSQHVVVIGAGAAGLVAARELSREGHTVVVLEREKEVGGLWIYSPKAESDPLSLDPTR 66
Query: 71 TRIHSSLYESLRTNLPREIMGFRDYPFVPR-EGPGRDPRRFPGHREVLKYLEDFANEFGI 130
+ +HSS+YESLRTNLPRE MGF D+PFVPR + RD RR+P H EVL YL+DFA EF +
Sbjct: 67 SIVHSSVYESLRTNLPRECMGFTDFPFVPRFDDESRDSRRYPSHMEVLAYLQDFAREFNL 126
Query: 131 CELVRFRTEVVFAGLGELGKWRVRFRCESGAVDDEIFDAVVVCVGIHSQPRVAEIPVI 188
E+VRF EVV GKWRV + G DEIFDAVVVC G +++P VA IP I
Sbjct: 127 EEMVRFEIEVVRVEPVN-GKWRVWSKTSGGVSHDEIFDAVVVCSGHYTEPNVAHIPGI 183
BLAST of Lag0017543 vs. ExPASy Swiss-Prot
Match:
Q9FWW3 (Flavin-containing monooxygenase FMO GS-OX-like 6 OS=Arabidopsis thaliana OX=3702 GN=At1g12130 PE=2 SV=1)
HSP 1 Score: 216.9 bits (551), Expect = 2.0e-55
Identity = 107/179 (59.78%), Postives = 133/179 (74.30%), Query Frame = 0
Query: 12 LTSRRVAVIGAGAGGLVAARELGREGHRVVVFERSGQIGGTWVYSPEIESDPLGLDPDRT 71
++SR VAVIGAGA GLVAAREL REGH V +FER Q+GG WV +P +E D L +DPDRT
Sbjct: 8 ISSRNVAVIGAGAAGLVAARELRREGHTVTIFERQKQVGGLWVCTPNVEPDLLSIDPDRT 67
Query: 72 RIHSSLYESLRTNLPREIMGFRDYPFVPR-EGPGRDPRRFPGHREVLKYLEDFANEFGIC 131
+HSS+Y+SLRTNLPRE MG+ D+PFV R + RDPRR+P HREV++YL+DFA EF I
Sbjct: 68 VVHSSVYQSLRTNLPRECMGYSDFPFVTRPDDESRDPRRYPDHREVMRYLQDFAKEFKIE 127
Query: 132 ELVRFRTEV--VFAGLGELGKWRVRFRCESGAVDDEIFDAVVVCVGIHSQPRVAEIPVI 188
E++RF TEV V KWRV+FR SG ++IFDAVV+C G ++PR+A IP I
Sbjct: 128 EMIRFETEVFRVEPTAENSCKWRVQFRSSSGVSGEDIFDAVVICNGHFTEPRLAHIPGI 186
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6596846.1 | 9.2e-90 | 88.77 | Flavin-containing monooxygenase FMO GS-OX-like 3, partial [Cucurbita argyrosperm... | [more] |
KAG7028376.1 | 9.2e-90 | 88.77 | Flavin-containing monooxygenase FMO GS-OX-like 3, partial [Cucurbita argyrosperm... | [more] |
XP_022942921.1 | 1.2e-89 | 88.77 | flavin-containing monooxygenase FMO GS-OX-like 3 [Cucurbita moschata] >XP_022942... | [more] |
XP_023005391.1 | 7.8e-89 | 88.24 | flavin-containing monooxygenase FMO GS-OX-like 3 [Cucurbita maxima] | [more] |
XP_023539206.1 | 7.8e-89 | 87.70 | flavin-containing monooxygenase FMO GS-OX-like 3 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Q93Y23 | 2.8e-57 | 61.24 | Flavin-containing monooxygenase FMO GS-OX4 OS=Arabidopsis thaliana OX=3702 GN=FM... | [more] |
A8MRX0 | 2.8e-57 | 62.92 | Flavin-containing monooxygenase FMO GS-OX5 OS=Arabidopsis thaliana OX=3702 GN=FM... | [more] |
Q9SXE1 | 1.1e-56 | 58.76 | Flavin-containing monooxygenase FMO GS-OX3 OS=Arabidopsis thaliana OX=3702 GN=FM... | [more] |
Q94K43 | 2.4e-56 | 61.80 | Flavin-containing monooxygenase FMO GS-OX2 OS=Arabidopsis thaliana OX=3702 GN=FM... | [more] |
Q9FWW3 | 2.0e-55 | 59.78 | Flavin-containing monooxygenase FMO GS-OX-like 6 OS=Arabidopsis thaliana OX=3702... | [more] |