Lag0017523 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0017523
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Locationchr5: 4816530 .. 4816973 (-)
RNA-Seq ExpressionLag0017523
SyntenyLag0017523
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTTCCACCAAAACCACTTCCTCACTTGCTCTCTTCTTCTGTGTCAACATTCTCTTCTCCTCCCTAGTCACTGCAGCTCGTAGCCCGCCAGTACCAGAGCCAACCCCGCCGCCAACCGCTAGCCCTAGCCCTCCACCGCCGCTAACCGCTGGCCCTCCGAGTCCGACTACCGGAAATGCTACTTGCCCTAGAAGTGGCCTCAGTATACAGTTATGTACAAATGTGCTCAACATTGTCAATATAAGTATTGGCAATCCACCTGTAGATGATTGTTGTAGCTTGATTACAGGGCTAGTGGACCTTGAGGCTGCTGTTTGTCTTTGCACTGCGCTCAAAGCGAGTCTTCTGGGCCTTATCAACCTAGACCTTCCCCTTTATCTCCGCTTACTGCTTAACGACTGTGGTAGCAATGTTCCTGAAGACTTCGAGTGTGCCTAA

mRNA sequence

ATGGCTTCTTCCACCAAAACCACTTCCTCACTTGCTCTCTTCTTCTGTGTCAACATTCTCTTCTCCTCCCTAGTCACTGCAGCTCGTAGCCCGCCAGTACCAGAGCCAACCCCGCCGCCAACCGCTAGCCCTAGCCCTCCACCGCCGCTAACCGCTGGCCCTCCGAGTCCGACTACCGGAAATGCTACTTGCCCTAGAAGTGGCCTCAGTATACAGTTATGTACAAATGTGCTCAACATTGTCAATATAAGTATTGGCAATCCACCTGTAGATGATTGTTGTAGCTTGATTACAGGGCTAGTGGACCTTGAGGCTGCTGTTTGTCTTTGCACTGCGCTCAAAGCGAGTCTTCTGGGCCTTATCAACCTAGACCTTCCCCTTTATCTCCGCTTACTGCTTAACGACTGTGGTAGCAATGTTCCTGAAGACTTCGAGTGTGCCTAA

Coding sequence (CDS)

ATGGCTTCTTCCACCAAAACCACTTCCTCACTTGCTCTCTTCTTCTGTGTCAACATTCTCTTCTCCTCCCTAGTCACTGCAGCTCGTAGCCCGCCAGTACCAGAGCCAACCCCGCCGCCAACCGCTAGCCCTAGCCCTCCACCGCCGCTAACCGCTGGCCCTCCGAGTCCGACTACCGGAAATGCTACTTGCCCTAGAAGTGGCCTCAGTATACAGTTATGTACAAATGTGCTCAACATTGTCAATATAAGTATTGGCAATCCACCTGTAGATGATTGTTGTAGCTTGATTACAGGGCTAGTGGACCTTGAGGCTGCTGTTTGTCTTTGCACTGCGCTCAAAGCGAGTCTTCTGGGCCTTATCAACCTAGACCTTCCCCTTTATCTCCGCTTACTGCTTAACGACTGTGGTAGCAATGTTCCTGAAGACTTCGAGTGTGCCTAA

Protein sequence

MASSTKTTSSLALFFCVNILFSSLVTAARSPPVPEPTPPPTASPSPPPPLTAGPPSPTTGNATCPRSGLSIQLCTNVLNIVNISIGNPPVDDCCSLITGLVDLEAAVCLCTALKASLLGLINLDLPLYLRLLLNDCGSNVPEDFECA
Homology
BLAST of Lag0017523 vs. NCBI nr
Match: XP_022759926.1 (14 kDa proline-rich protein DC2.15-like isoform X1 [Durio zibethinus])

HSP 1 Score: 140.6 bits (353), Expect = 1.1e-29
Identity = 79/144 (54.86%), Postives = 101/144 (70.14%), Query Frame = 0

Query: 4   STKTTSSLALFFCVNILFSSLVTAARSPPVPEPTPPPTASPSPPPPLTAGPPSPTTGNAT 63
           ++K ++SLALFF +NILF SLV+A  S P P+P P PT SPSP            +G   
Sbjct: 2   ASKKSASLALFFALNILFFSLVSARASCPSPKPKPNPTPSPSP------------SGGGK 61

Query: 64  CPRSGLSIQLCTNVLNIVNISIGNPPVDDCCSLITGLVDLEAAVCLCTALKASLLGLINL 123
           CPR  L + +C +VL +VN++IG+PPV  CCSLI GL DLEAAVCLCTA+KA++LG INL
Sbjct: 62  CPRDALKLGVCADVLGLVNVTIGSPPVQPCCSLIQGLADLEAAVCLCTAIKANILG-INL 121

Query: 124 DLPLYLRLLLNDCGSNVPEDFECA 148
           ++P+ L LLLN C  NVP  F+CA
Sbjct: 122 NIPVSLSLLLNVCSKNVPSGFQCA 132

BLAST of Lag0017523 vs. NCBI nr
Match: XP_009333597.1 (PREDICTED: 14 kDa proline-rich protein DC2.15-like [Pyrus x bretschneideri])

HSP 1 Score: 140.2 bits (352), Expect = 1.4e-29
Identity = 83/146 (56.85%), Postives = 109/146 (74.66%), Query Frame = 0

Query: 4   STKTTSSLALFFCVNILFSSLVTAARSPPVPEPTPPPTASPSP-PPPLTAGPPSPTTGNA 63
           ++KTTSSLALF  +N+ F +LV++  + P P P P PT +P+P P P     PSP+TG  
Sbjct: 2   ASKTTSSLALFLALNLFFFALVSSCGTCPNPNPRPRPTPNPTPNPTPNPTPNPSPSTG-T 61

Query: 64  TCPRSGLSIQLCTNVLN-IVNISIGNPPVDDCCSLITGLVDLEAAVCLCTALKASLLGLI 123
            CPR  L + +C NVLN ++NI++GNPPV  CCSLI GLVDLEAAVCLCTA++A++LG I
Sbjct: 62  RCPRDTLKLGVCANVLNGLLNITVGNPPVQPCCSLIQGLVDLEAAVCLCTAIRANILG-I 121

Query: 124 NLDLPLYLRLLLNDCGSNVPEDFECA 148
           NL++PL L LLLN CG+ VP+ F+CA
Sbjct: 122 NLNIPLSLSLLLNVCGNKVPKGFQCA 145

BLAST of Lag0017523 vs. NCBI nr
Match: XP_018497890.1 (PREDICTED: 14 kDa proline-rich protein DC2.15-like isoform X3 [Pyrus x bretschneideri])

HSP 1 Score: 138.3 bits (347), Expect = 5.4e-29
Identity = 81/145 (55.86%), Postives = 106/145 (73.10%), Query Frame = 0

Query: 4   STKTTSSLALFFCVNILFSSLVTAARSPPVPEPTPPPTASPSPPPPLTAGPPSPTTGNAT 63
           ++KTTSSLALF  +N+ F +LV++  + P P P P PT +P+P        PSP+TG   
Sbjct: 2   ASKTTSSLALFLALNLFFFALVSSCGTCPNPNPRPRPTPNPTP-------NPSPSTG-TR 61

Query: 64  CPRSGLSIQLCTNVLN-IVNISIGNPPVDDCCSLITGLVDLEAAVCLCTALKASLLGLIN 123
           CPR  L + +C NVLN ++NI++GNPPV  CCSLI GLVDLEAAVCLCTA++A++LG IN
Sbjct: 62  CPRDTLKLGVCANVLNGLLNITVGNPPVQPCCSLIQGLVDLEAAVCLCTAIRANILG-IN 121

Query: 124 LDLPLYLRLLLNDCGSNVPEDFECA 148
           L++PL L LLLN CG+ VP  F+CA
Sbjct: 122 LNIPLSLSLLLNVCGNKVPRGFQCA 137

BLAST of Lag0017523 vs. NCBI nr
Match: XP_007209745.1 (14 kDa proline-rich protein DC2.15 [Prunus persica] >ONI06655.1 hypothetical protein PRUPE_5G073200 [Prunus persica])

HSP 1 Score: 137.5 bits (345), Expect = 9.3e-29
Identity = 79/145 (54.48%), Postives = 107/145 (73.79%), Query Frame = 0

Query: 4   STKTTSSLALFFCVNILFSSLVTAARSPPVPEPTPPPTASPSPPPPLTAGPPSPTTGNAT 63
           ++KTT+SL+LF  +N+LF +LV++  + P P P P P   PSP P   + P +P+TG   
Sbjct: 2   ASKTTASLSLFLALNLLFFALVSSCGTCPGPNPRPRPNPRPSPTPSTPSTPSTPSTG-TR 61

Query: 64  CPRSGLSIQLCTNVLN-IVNISIGNPPVDDCCSLITGLVDLEAAVCLCTALKASLLGLIN 123
           CPR  L + +C NVLN ++NI+IG PPV  CCSLI GL D+EAAVCLCTA+KA++LG IN
Sbjct: 62  CPRDTLKLGVCANVLNGLLNITIGKPPVAPCCSLIQGLADVEAAVCLCTAIKANILG-IN 121

Query: 124 LDLPLYLRLLLNDCGSNVPEDFECA 148
           L++P+ L LLLN CG+ VP+DF+CA
Sbjct: 122 LNIPISLSLLLNVCGNKVPKDFQCA 144

BLAST of Lag0017523 vs. NCBI nr
Match: XP_008389722.1 (14 kDa proline-rich protein DC2.15-like [Malus domestica])

HSP 1 Score: 137.1 bits (344), Expect = 1.2e-28
Identity = 81/145 (55.86%), Postives = 106/145 (73.10%), Query Frame = 0

Query: 4   STKTTSSLALFFCVNILFSSLVTAARSPPVPEPTPPPTASPSPPPPLTAGPPSPTTGNAT 63
           ++KTTSSLALF  +N+ F +LV++  + P P+P P P   P P P      PSP+TG  +
Sbjct: 2   ASKTTSSLALFLALNLFFFALVSSCGTCPGPKPKPKPKPKPKPTP-----KPSPSTG-TS 61

Query: 64  CPRSGLSIQLCTNVLN-IVNISIGNPPVDDCCSLITGLVDLEAAVCLCTALKASLLGLIN 123
           CPR  L + +C NVLN ++NIS+G PPV+ CCSLI GL DLEAAVCLCTALKA++LG IN
Sbjct: 62  CPRDTLKLGVCANVLNGLLNISVGKPPVEPCCSLIQGLADLEAAVCLCTALKANILG-IN 121

Query: 124 LDLPLYLRLLLNDCGSNVPEDFECA 148
           L++P+ L LLLN CG+ VP+ F+CA
Sbjct: 122 LNIPVSLSLLLNVCGNKVPKGFQCA 139

BLAST of Lag0017523 vs. ExPASy Swiss-Prot
Match: P14009 (14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 4.5e-26
Identity = 73/144 (50.69%), Postives = 99/144 (68.75%), Query Frame = 0

Query: 5   TKTTSSLALFFCVNILFSSLVTAARSPPVP-EPTPPPTASPSPPPPLTAGPPSPTTGNAT 64
           +K ++S+ALFF +NILF +LV++    P P +P P PT  P+P P  +AG          
Sbjct: 3   SKNSASVALFFTLNILFFALVSSTEKCPDPYKPKPKPTPKPTPTPYPSAG---------K 62

Query: 65  CPRSGLSIQLCTNVLNIV-NISIGNPPVDDCCSLITGLVDLEAAVCLCTALKASLLGLIN 124
           CPR  L + +C +VLN+V N+ IG+PP   CCSL+ GLV+LEAAVCLCTA+KA++LG  N
Sbjct: 63  CPRDALKLGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILGK-N 122

Query: 125 LDLPLYLRLLLNDCGSNVPEDFEC 147
           L+LP+ L L+LN+CG  VP  FEC
Sbjct: 123 LNLPIALSLVLNNCGKQVPNGFEC 136

BLAST of Lag0017523 vs. ExPASy Swiss-Prot
Match: Q9S7I2 (Putative lipid-binding protein AIR1 OS=Arabidopsis thaliana OX=3702 GN=AIR1 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.9e-25
Identity = 54/92 (58.70%), Postives = 72/92 (78.26%), Query Frame = 0

Query: 56  SPTTGNATCPRSGLSIQLCTNVLNIVNISIGNPPVDDCCSLITGLVDLEAAVCLCTALKA 115
           S TTG  TCP++ + I  C  VLN+V++++GNPPV  CCSLI GL DLEAAVCLCTA+KA
Sbjct: 22  SATTG--TCPKNSIEIGTCVTVLNLVDLTLGNPPVKPCCSLIQGLADLEAAVCLCTAVKA 81

Query: 116 SLLGLINLDLPLYLRLLLNDCGSNVPEDFECA 148
           S+LG++N++LP+ L +LLN C  N P+ F+CA
Sbjct: 82  SILGIVNINLPINLSVLLNVCSRNAPKSFQCA 111

BLAST of Lag0017523 vs. ExPASy Swiss-Prot
Match: Q9ZSP6 (Putative lipid-binding protein AIR1B OS=Arabidopsis thaliana OX=3702 GN=AIR1B PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.2e-23
Identity = 55/92 (59.78%), Postives = 70/92 (76.09%), Query Frame = 0

Query: 56  SPTTGNATCPRSGLSIQLCTNVLNIVNISIGNPPVDDCCSLITGLVDLEAAVCLCTALKA 115
           S TTG  TCP   + I  C NVLN+V++++GNPPV  CCSLI GL DLEAA CLCTALKA
Sbjct: 22  SATTG--TCP---IQISTCANVLNLVDLTLGNPPVKPCCSLIQGLADLEAAACLCTALKA 81

Query: 116 SLLGLINLDLPLYLRLLLNDCGSNVPEDFECA 148
           S+LG++N++LP+ L +LLN C  N P+ F+CA
Sbjct: 82  SILGIVNINLPINLSVLLNVCSRNAPKGFQCA 108

BLAST of Lag0017523 vs. ExPASy Swiss-Prot
Match: Q9SU35 (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.5e-23
Identity = 73/162 (45.06%), Postives = 99/162 (61.11%), Query Frame = 0

Query: 4   STKTTSSLALFFCVNILFSSLVTAA--------RSPPVPEPTPPPTASPSPPPPLTAGP- 63
           ++K ++SLALFF +NILF +L  A         +  PVP P P P   P PP P    P 
Sbjct: 2   ASKNSASLALFFALNILFFTLTVATNCNCKPSPKPKPVPSPKPKPVQCPPPPRPSVPSPN 61

Query: 64  PSPTT--------GNATCPRSGLSIQLCTNVL-NIVNISIGNPPVDDCCSLITGLVDLEA 123
           P P T        GN +CP   L + +C NVL +++NI +G P    CCSLI GLVD++A
Sbjct: 62  PRPVTPPRTPGSSGN-SCPIDALKLGVCANVLSSLLNIQLGQPSSQQCCSLIQGLVDVDA 121

Query: 124 AVCLCTALKASLLGLINLDLPLYLRLLLNDCGSNVPEDFECA 148
           A+CLCTAL+A++LG INL++P+ L +LLN C   +P  F+CA
Sbjct: 122 AICLCTALRANVLG-INLNVPISLSVLLNVCNRKLPSGFQCA 161

BLAST of Lag0017523 vs. ExPASy Swiss-Prot
Match: Q39176 (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.0e-23
Identity = 72/168 (42.86%), Postives = 98/168 (58.33%), Query Frame = 0

Query: 4   STKTTSSLALFFCVNILFSSLVTAA----------------RSPPVPEPTPPPTASPSPP 63
           ++K ++S+ALFF +NI+F +L  A                 +  PVP P P P  SPS P
Sbjct: 2   ASKNSASIALFFALNIIFFTLTAATDCGCNPSPKHKPVPSPKPKPVPSPKPKPVPSPSVP 61

Query: 64  PPLTAGP-PSPTT------GNATCPRSGLSIQLCTNVL-NIVNISIGNPPVDDCCSLITG 123
            P    P P P T       +  CP   L + +C NVL +++NI +G P    CCSLI G
Sbjct: 62  SPSVPSPNPRPVTPPRTPGSSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQG 121

Query: 124 LVDLEAAVCLCTALKASLLGLINLDLPLYLRLLLNDCGSNVPEDFECA 148
           LVDL+AA+CLCTAL+A++LG INL++P+ L +LLN C   VP  F+CA
Sbjct: 122 LVDLDAAICLCTALRANVLG-INLNVPISLSVLLNVCNRKVPSGFQCA 168

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022759926.11.1e-2954.8614 kDa proline-rich protein DC2.15-like isoform X1 [Durio zibethinus][more]
XP_009333597.11.4e-2956.85PREDICTED: 14 kDa proline-rich protein DC2.15-like [Pyrus x bretschneideri][more]
XP_018497890.15.4e-2955.86PREDICTED: 14 kDa proline-rich protein DC2.15-like isoform X3 [Pyrus x bretschne... [more]
XP_007209745.19.3e-2954.4814 kDa proline-rich protein DC2.15 [Prunus persica] >ONI06655.1 hypothetical pro... [more]
XP_008389722.11.2e-2855.8614 kDa proline-rich protein DC2.15-like [Malus domestica][more]
Match NameE-valueIdentityDescription
P140094.5e-2650.6914 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1[more]
Q9S7I24.9e-2558.70Putative lipid-binding protein AIR1 OS=Arabidopsis thaliana OX=3702 GN=AIR1 PE=2... [more]
Q9ZSP61.2e-2359.78Putative lipid-binding protein AIR1B OS=Arabidopsis thaliana OX=3702 GN=AIR1B PE... [more]
Q9SU353.5e-2345.06pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE... [more]
Q391766.0e-2342.86Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027923Hydrophobic seed protein domainPFAMPF14547Hydrophob_seedcoord: 63..147
e-value: 2.9E-23
score: 81.9
IPR027923Hydrophobic seed protein domainCDDcd01958HPS_likecoord: 61..146
e-value: 5.6142E-19
score: 74.2872
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilyGENE3D1.10.110.10coord: 61..147
e-value: 8.4E-24
score: 85.2
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilySUPERFAMILY47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 69..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..55
NoneNo IPR availablePANTHERPTHR31731:SF82HYPRP2coord: 6..146
NoneNo IPR availablePANTHERPTHR31731FAMILY NOT NAMEDcoord: 6..146

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0017523.1Lag0017523.1mRNA