Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCAAAGTCTCCTCAGCCACTGCCCTCCTCCTCTTCCTCAACCTCCTCTTCTTCGTCACGGTCAGCTCGACCTACGTCCCTTGCCCTCCGCCGCCGCCGAAGTACCACAAGCCCGCCCCCTCGAAGCAGCCGCCTCCACTGCCCCGGTGCCCAAAGGACACCCTTAAGCTCGGCGTTTGCGCCGACTTGCTCGACGGTCTAGTGCACGTGGTGATCGGCACACCGCCGAAAACCCCATGCTGCACCCTGATCCAAGGTCTGGCTGATCTTGAAGCTGCTGTCTGTCTTTGTACTGCGGTCAAGGCTAAAGCCTTGGGGCTCAACATTGACCTCTCAGTTTCCCTCAGCTTGCTGTTGAACTACTGTGGAAAGAAGGTTCCATATGGCTTCAAATGCCCAGCTTGA
mRNA sequence
ATGGCTTCCAAAGTCTCCTCAGCCACTGCCCTCCTCCTCTTCCTCAACCTCCTCTTCTTCGTCACGGTCAGCTCGACCTACGTCCCTTGCCCTCCGCCGCCGCCGAAGTACCACAAGCCCGCCCCCTCGAAGCAGCCGCCTCCACTGCCCCGGTGCCCAAAGGACACCCTTAAGCTCGGCGTTTGCGCCGACTTGCTCGACGGTCTAGTGCACGTGGTGATCGGCACACCGCCGAAAACCCCATGCTGCACCCTGATCCAAGGTCTGGCTGATCTTGAAGCTGCTGTCTGTCTTTGTACTGCGGTCAAGGCTAAAGCCTTGGGGCTCAACATTGACCTCTCAGTTTCCCTCAGCTTGCTGTTGAACTACTGTGGAAAGAAGGTTCCATATGGCTTCAAATGCCCAGCTTGA
Coding sequence (CDS)
ATGGCTTCCAAAGTCTCCTCAGCCACTGCCCTCCTCCTCTTCCTCAACCTCCTCTTCTTCGTCACGGTCAGCTCGACCTACGTCCCTTGCCCTCCGCCGCCGCCGAAGTACCACAAGCCCGCCCCCTCGAAGCAGCCGCCTCCACTGCCCCGGTGCCCAAAGGACACCCTTAAGCTCGGCGTTTGCGCCGACTTGCTCGACGGTCTAGTGCACGTGGTGATCGGCACACCGCCGAAAACCCCATGCTGCACCCTGATCCAAGGTCTGGCTGATCTTGAAGCTGCTGTCTGTCTTTGTACTGCGGTCAAGGCTAAAGCCTTGGGGCTCAACATTGACCTCTCAGTTTCCCTCAGCTTGCTGTTGAACTACTGTGGAAAGAAGGTTCCATATGGCTTCAAATGCCCAGCTTGA
Protein sequence
MASKVSSATALLLFLNLLFFVTVSSTYVPCPPPPPKYHKPAPSKQPPPLPRCPKDTLKLGVCADLLDGLVHVVIGTPPKTPCCTLIQGLADLEAAVCLCTAVKAKALGLNIDLSVSLSLLLNYCGKKVPYGFKCPA
Homology
BLAST of Lag0017516 vs. NCBI nr
Match:
XP_022944278.1 (14 kDa proline-rich protein DC2.15-like [Cucurbita moschata])
HSP 1 Score: 241.1 bits (614), Expect = 5.5e-60
Identity = 118/136 (86.76%), Postives = 128/136 (94.12%), Query Frame = 0
Query: 1 MASKVSSATALLLFLNLLFFVTVSSTYVPCPPPPPKYHKPAPSKQPPPLPRCPKDTLKLG 60
MASK+SS TALLL LNLLFF VSSTYVPCPPPPP++HKP PS+QPP LP+CP+DTLKLG
Sbjct: 1 MASKLSSPTALLLLLNLLFFTMVSSTYVPCPPPPPRHHKPTPSRQPPSLPKCPRDTLKLG 60
Query: 61 VCADLLDGLVHVVIGTPPKTPCCTLIQGLADLEAAVCLCTAVKAKALGLNIDLSVSLSLL 120
VCADLLDGLVHVVIG+PPK+PCCTLIQGL DLEAAVCLCTAVKA+ALGLNIDLSVSLSLL
Sbjct: 61 VCADLLDGLVHVVIGSPPKSPCCTLIQGLVDLEAAVCLCTAVKARALGLNIDLSVSLSLL 120
Query: 121 LNYCGKKVPYGFKCPA 137
LNYCGKKVP GF+CPA
Sbjct: 121 LNYCGKKVPSGFQCPA 136
BLAST of Lag0017516 vs. NCBI nr
Match:
XP_022944335.1 (14 kDa proline-rich protein DC2.15-like [Cucurbita moschata])
HSP 1 Score: 240.4 bits (612), Expect = 9.4e-60
Identity = 117/136 (86.03%), Postives = 128/136 (94.12%), Query Frame = 0
Query: 1 MASKVSSATALLLFLNLLFFVTVSSTYVPCPPPPPKYHKPAPSKQPPPLPRCPKDTLKLG 60
M SK+SS+TALLL LNLLFF VSSTYVPCPPPPP++HKP PS+QPP LP+CP+DTLKLG
Sbjct: 1 MTSKLSSSTALLLLLNLLFFTMVSSTYVPCPPPPPRHHKPTPSRQPPSLPKCPRDTLKLG 60
Query: 61 VCADLLDGLVHVVIGTPPKTPCCTLIQGLADLEAAVCLCTAVKAKALGLNIDLSVSLSLL 120
VCADLLDGLVHVVIG+PPK+PCCTLIQGL DLEAAVCLCTAVKA+ALGLNIDLSVSLSLL
Sbjct: 61 VCADLLDGLVHVVIGSPPKSPCCTLIQGLVDLEAAVCLCTAVKARALGLNIDLSVSLSLL 120
Query: 121 LNYCGKKVPYGFKCPA 137
LNYCGKKVP GF+CPA
Sbjct: 121 LNYCGKKVPSGFQCPA 136
BLAST of Lag0017516 vs. NCBI nr
Match:
XP_038905266.1 (14 kDa proline-rich protein DC2.15-like [Benincasa hispida])
HSP 1 Score: 235.3 bits (599), Expect = 3.0e-58
Identity = 116/136 (85.29%), Postives = 124/136 (91.18%), Query Frame = 0
Query: 1 MASKVSSATALLLFLNLLFFVTVSSTYVPCPPPPPKYHKPAPSKQPPPLPRCPKDTLKLG 60
MASK+SSAT+LLL NLLFF V+STYVPCPPPPPK+ K PSKQP P PRCPKDTLKLG
Sbjct: 1 MASKISSATSLLLLFNLLFFTMVTSTYVPCPPPPPKHPKGVPSKQPAPQPRCPKDTLKLG 60
Query: 61 VCADLLDGLVHVVIGTPPKTPCCTLIQGLADLEAAVCLCTAVKAKALGLNIDLSVSLSLL 120
VCADLLDGLVH+VIG PPKTPCCTLIQ +ADLEAAVCLCT +KAKALGLNIDLSVSLSLL
Sbjct: 61 VCADLLDGLVHLVIGKPPKTPCCTLIQDIADLEAAVCLCTVIKAKALGLNIDLSVSLSLL 120
Query: 121 LNYCGKKVPYGFKCPA 137
LNYCGKKVPYGF+CPA
Sbjct: 121 LNYCGKKVPYGFQCPA 136
BLAST of Lag0017516 vs. NCBI nr
Match:
XP_023540294.1 (14 kDa proline-rich protein DC2.15-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 232.6 bits (592), Expect = 2.0e-57
Identity = 115/136 (84.56%), Postives = 125/136 (91.91%), Query Frame = 0
Query: 1 MASKVSSATALLLFLNLLFFVTVSSTYVPCPPPPPKYHKPAPSKQPPPLPRCPKDTLKLG 60
MASK SS ALLL LNLLFF VSSTYVPCPPPPPK+ KP PS+QPP LP+CP+DTLKLG
Sbjct: 1 MASKHSSPIALLLLLNLLFFTMVSSTYVPCPPPPPKHLKPTPSRQPPSLPKCPRDTLKLG 60
Query: 61 VCADLLDGLVHVVIGTPPKTPCCTLIQGLADLEAAVCLCTAVKAKALGLNIDLSVSLSLL 120
VCADLLDGLVHVVIG+PPK+PCCTLIQGL DLEAAVCLCTAVKA+ALGLN+DLSVSL+LL
Sbjct: 61 VCADLLDGLVHVVIGSPPKSPCCTLIQGLVDLEAAVCLCTAVKARALGLNVDLSVSLTLL 120
Query: 121 LNYCGKKVPYGFKCPA 137
LNYCGKKVP GF+CPA
Sbjct: 121 LNYCGKKVPSGFQCPA 136
BLAST of Lag0017516 vs. NCBI nr
Match:
XP_023005597.1 (14 kDa proline-rich protein DC2.15-like [Cucurbita maxima])
HSP 1 Score: 232.3 bits (591), Expect = 2.6e-57
Identity = 114/136 (83.82%), Postives = 124/136 (91.18%), Query Frame = 0
Query: 1 MASKVSSATALLLFLNLLFFVTVSSTYVPCPPPPPKYHKPAPSKQPPPLPRCPKDTLKLG 60
MASK+SS ALLL LNLLFF SSTYVPCPP PP++HKP PS+QPP LP+CP+DTLKLG
Sbjct: 1 MASKLSSPAALLLLLNLLFFTMASSTYVPCPPSPPRHHKPTPSRQPPSLPKCPRDTLKLG 60
Query: 61 VCADLLDGLVHVVIGTPPKTPCCTLIQGLADLEAAVCLCTAVKAKALGLNIDLSVSLSLL 120
VCADLLDGLVHVVIG+PPK+PCCTLIQGL DLEAAVCLCTAVKA+ALGL IDLSVSLSLL
Sbjct: 61 VCADLLDGLVHVVIGSPPKSPCCTLIQGLVDLEAAVCLCTAVKARALGLKIDLSVSLSLL 120
Query: 121 LNYCGKKVPYGFKCPA 137
LNYCGKKVP GF+CPA
Sbjct: 121 LNYCGKKVPSGFQCPA 136
BLAST of Lag0017516 vs. ExPASy Swiss-Prot
Match:
P14009 (14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1)
HSP 1 Score: 143.3 bits (360), Expect = 2.0e-33
Identity = 77/137 (56.20%), Postives = 99/137 (72.26%), Query Frame = 0
Query: 1 MASKVSSATALLLFLNLLFFVTVSSTYVPCPPPPPKYHKPAPSKQPPPLP---RCPKDTL 60
M SK S++ AL LN+LFF VSST CP P KP P P P P +CP+D L
Sbjct: 1 MGSKNSASVALFFTLNILFFALVSST-EKCPDPYKPKPKPTPKPTPTPYPSAGKCPRDAL 60
Query: 61 KLGVCADLLDGLVHVVIGTPPKTPCCTLIQGLADLEAAVCLCTAVKAKALGLNIDLSVSL 120
KLGVCAD+L+ + +VVIG+PP PCC+L++GL +LEAAVCLCTA+KA LG N++L ++L
Sbjct: 61 KLGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILGKNLNLPIAL 120
Query: 121 SLLLNYCGKKVPYGFKC 135
SL+LN CGK+VP GF+C
Sbjct: 121 SLVLNNCGKQVPNGFEC 136
BLAST of Lag0017516 vs. ExPASy Swiss-Prot
Match:
Q39176 (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV=1)
HSP 1 Score: 125.9 bits (315), Expect = 3.4e-28
Identity = 70/169 (41.42%), Postives = 98/169 (57.99%), Query Frame = 0
Query: 1 MASKVSSATALLLFLNLLFFVTVSSTYVPCPPPPPKYHKPAPSKQPPPLP---------- 60
MASK S++ AL LN++FF ++T C P P HKP PS +P P+P
Sbjct: 1 MASKNSASIALFFALNIIFFTLTAATDCGCNPSPK--HKPVPSPKPKPVPSPKPKPVPSP 60
Query: 61 -------------------------RCPKDTLKLGVCADLLDGLVHVVIGTPPKTPCCTL 120
CP D L+LGVCA++L L+++ +G P PCC+L
Sbjct: 61 SVPSPSVPSPNPRPVTPPRTPGSSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSL 120
Query: 121 IQGLADLEAAVCLCTAVKAKALGLNIDLSVSLSLLLNYCGKKVPYGFKC 135
IQGL DL+AA+CLCTA++A LG+N+++ +SLS+LLN C +KVP GF+C
Sbjct: 121 IQGLVDLDAAICLCTALRANVLGINLNVPISLSVLLNVCNRKVPSGFQC 167
BLAST of Lag0017516 vs. ExPASy Swiss-Prot
Match:
Q9SU35 (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE=1 SV=1)
HSP 1 Score: 122.9 bits (307), Expect = 2.9e-27
Identity = 70/160 (43.75%), Postives = 99/160 (61.88%), Query Frame = 0
Query: 1 MASKVSSATALLLFLNLLFFVTVSSTY-----------VPCP-------PPPPKYHKPAP 60
MASK S++ AL LN+LFF +T VP P PPPP+ P+P
Sbjct: 1 MASKNSASLALFFALNILFFTLTVATNCNCKPSPKPKPVPSPKPKPVQCPPPPRPSVPSP 60
Query: 61 SKQPPPLPR--------CPKDTLKLGVCADLLDGLVHVVIGTPPKTPCCTLIQGLADLEA 120
+ +P PR CP D LKLGVCA++L L+++ +G P CC+LIQGL D++A
Sbjct: 61 NPRPVTPPRTPGSSGNSCPIDALKLGVCANVLSSLLNIQLGQPSSQQCCSLIQGLVDVDA 120
Query: 121 AVCLCTAVKAKALGLNIDLSVSLSLLLNYCGKKVPYGFKC 135
A+CLCTA++A LG+N+++ +SLS+LLN C +K+P GF+C
Sbjct: 121 AICLCTALRANVLGINLNVPISLSVLLNVCNRKLPSGFQC 160
BLAST of Lag0017516 vs. ExPASy Swiss-Prot
Match:
Q8RW93 (Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana OX=3702 GN=At4g00165 PE=2 SV=1)
HSP 1 Score: 119.4 bits (298), Expect = 3.2e-26
Identity = 71/136 (52.21%), Postives = 85/136 (62.50%), Query Frame = 0
Query: 3 SKVSSATALLLFLNLLFF---VTVSSTYVPCPPPPPKYHKPAPSKQPPPLPRCPKDTLKL 62
SK + +LL LN+ FF VT +T PCPPPP K +CP+DTLK
Sbjct: 4 SKALRSLLILLLLNITFFFGHVTPGATVKPCPPPPAK----------QATTKCPRDTLKF 63
Query: 63 GVCADLLDGLVHVVIGTPPKTPCCTLIQGLADLEAAVCLCTAVKAKALGL-NIDLSVSLS 122
GVC L GLV VIGTPP CC+LI+GLAD EAAVCLCTA+K LG+ + + V+L+
Sbjct: 64 GVCGSWL-GLVSEVIGTPPSQECCSLIKGLADFEAAVCLCTALKTSILGVAPVKIPVALT 123
Query: 123 LLLNYCGKKVPYGFKC 135
LLLN CGK VP GF C
Sbjct: 124 LLLNSCGKNVPQGFVC 128
BLAST of Lag0017516 vs. ExPASy Swiss-Prot
Match:
Q9SU33 (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g12500 PE=2 SV=1)
HSP 1 Score: 115.9 bits (289), Expect = 3.5e-25
Identity = 73/176 (41.48%), Postives = 101/176 (57.39%), Query Frame = 0
Query: 1 MASKVSSATALLLFLNLLFFVTVSST-----------YVPCPP-PPPKYHKPA------- 60
MASK S++ AL LN+LFF ++T VP P P PKY P+
Sbjct: 1 MASKNSTSLALFFALNILFFTLTTATDCRCNLSPKPRTVPSPKVPSPKYPSPSIPSPSVP 60
Query: 61 --------------PSKQPPPL--PR-------CPKDTLKLGVCADLLDGLVHVVIGTPP 120
PS P P+ PR CP D L+LGVCA++L GL++V +G P
Sbjct: 61 TPSVPTPSVPTPSVPSPNPTPVTPPRTPGSSGNCPIDALRLGVCANVLSGLLNVQLGQPS 120
Query: 121 KTPCCTLIQGLADLEAAVCLCTAVKAKALGLNIDLSVSLSLLLNYCGKKVPYGFKC 135
PCC+LIQGL DL+AA+CLCTA++A LG+N+++ +SLS+LLN C +++P F+C
Sbjct: 121 AQPCCSLIQGLVDLDAAICLCTALRANVLGINLNVPISLSVLLNVCNRRLPSDFQC 176
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022944278.1 | 5.5e-60 | 86.76 | 14 kDa proline-rich protein DC2.15-like [Cucurbita moschata] | [more] |
XP_022944335.1 | 9.4e-60 | 86.03 | 14 kDa proline-rich protein DC2.15-like [Cucurbita moschata] | [more] |
XP_038905266.1 | 3.0e-58 | 85.29 | 14 kDa proline-rich protein DC2.15-like [Benincasa hispida] | [more] |
XP_023540294.1 | 2.0e-57 | 84.56 | 14 kDa proline-rich protein DC2.15-like [Cucurbita pepo subsp. pepo] | [more] |
XP_023005597.1 | 2.6e-57 | 83.82 | 14 kDa proline-rich protein DC2.15-like [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
P14009 | 2.0e-33 | 56.20 | 14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1 | [more] |
Q39176 | 3.4e-28 | 41.42 | Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV... | [more] |
Q9SU35 | 2.9e-27 | 43.75 | pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE... | [more] |
Q8RW93 | 3.2e-26 | 52.21 | Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana OX=3702 GN=At4g... | [more] |
Q9SU33 | 3.5e-25 | 41.48 | pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g125... | [more] |