Lag0017472 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0017472
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Reverse transcriptase domain-containing protein
Location	chr5: 4081343 .. 4082719 (+)
RNA-Seq Expression	Lag0017472
Synteny	Lag0017472

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCAAAGAGAATTTAACTACATTAAGAAGTGTGCAAGTACTTCCCTCCTAAAAGCTCCCAAGTCTATCATCAAGGCTATGGAAAAAGTGACCAGAGATTTTGTCTGGGGTGAGGGTAGCTACAAGCCCGGTGCAGATTTGGTTAAATGGGAGTGGTCTGCTTTGCCCATTAACCATGGCGGGCTCGGGGTGGGATCCTTGGAGCAAAGAAATACTTCTCTGATGATTAAATGGTTGTGGCGATTCTCTCAAGAGAGAGATTCTTTGTGGAGAAGAGTCATTAGTAGTATCTACGACATTTCTTACCTTGGGTGGAAACCCGACTTGCTGAGAGGGAGAAAAGGCAACAGACTGTGGGTGGACATTGCGTCTGACTTCCCCCCATTTGAGCAGTTCACGACTTTCACAGCTGATTGTGGAAGAAACATTAGGTTTTGGGAGGATAGATGGTGTGATGCTCAGCCCCTTAAAGATCTCTTCTCCAACTTGTATTTGATTTCTCAAAAGAAGAATGCTCCCATCGCGAGTGCTGGAATGGAGAGCAGCAGTCGTGGAACCTCTCCTTTAGAAGGGCAACAGACTGTGGGTGGACATTGCGCCTGACTTCCCCCCATTTGAGCAGTTCACGACTTTCACAGCTGATTGTGGAAGAAACATTAGGTTTTGGGAGGATAGATGGTGTGATGCTCAGCCCCTTAAAGATCTCTTCTCCAACTTGTATTTGATTTCTCAAAAGAAGAATGCTCCCATCGCGAGTGCTGGAATGGAGAGCAGCAGTCGTGGAACCTCTCCTTTAGAAGGGCAACAGACTGTGGGTGGACATTGCGCCTGACTTCCCCCCATTTGAGTAGTTCACGACTTTCACAGCTGATTGTGGAAGAAACATTAGGTTTTGGGAGGATAGATGGTGTGATGCTCAGCCCCTTAAAGATCTCTTCTCCAACTTGTATTTGATTTCTCAAAAGAAGAATGCTCCCATCGCTGAGTGCTGGAATGGAGAGCAGCAGTCGTGGAACCTCTCCTTTAGAAGGGGCCTTTTTGATAGAGAATTAGGCAGTTGGGTGGCTTTGGTGGAGAAGATTAACCTTGTGAGACTGGGGGATGGCCAAGATAGCATAAGATGGTCCCTCGATAGTTCTGGTAAATACTCGACTAAGTCCTTGTTTCAATATATGACTAAATCTCCATAAAAAATATCCCCCTCTTTGGCCAATATGATATGGAAGCATAGAAGCCCGAAAAAAGTCAAAGTCTTCCTTTGGTCCCTTGCATATCGAAGCCTAAATACTGATGATAAACTTCAAAGGAAGTTCAGCCGGTGGTCTCTTTCTCCCTCAGCCTGCAGGTTATGTCTTAAGTCCGAGGAAGCTTTAG

mRNA sequence

ATGACTCAAAGAGAATTTAACTACATTAAGAAGTGTGCAAGTACTTCCCTCCTAAAAGCTCCCAAGTCTATCATCAAGGCTATGGAAAAAGTGACCAGAGATTTTGTCTGGGGTGAGGGTAGCTACAAGCCCGGTGCAGATTTGGTTAAATGGGAGTGGTCTGCTTTGCCCATTAACCATGGCGGGCTCGGGGTGGGATCCTTGGAGCAAAGAAATACTTCTCTGATGATTAAATGGTTGTGGCGATTCTCTCAAGAGAGAGATTCTTTGTGGAGAAGAGTCATTAGTAGTATCTACGACATTTCTTACCTTGGGTGGAAACCCGACTTGCTGAGAGGGAGAAAAGGCAACAGACTGTGGGTGGACATTGCGTCTGACTTCCCCCCATTTGAGCAGTTCACGACTTTCACAGCTGATTGTGGAAGAAACATTAGGTTTTGGGAGGATAGATGGTGTGATGCTCAGCCCCTTAAAGATCTCTTCTCCAACTTGTATTTGATTTCTCAAAAGAAGAATGCTCCCATCGCGAGTGCTGGAATGGAGAGCAGCAGTCGTGGAACCTCTCCTTTAGAAGGGCAACAGACTCCCCTTAAAGATCTCTTCTCCAACTTGTATTTGATTTCTCAAAAGAAGAATGCTCCCATCGCGAGTGCTGGAATGGAGAGCAGCAGTCGTGGAACCTCTCCTTTAGAAGGGCAACAGACTCCCCTTAAAGATCTCTTCTCCAACTTGTATTTGATTTCTCAAAAGAAGAATGCTCCCATCGCTGAGTGCTGGAATGGAGAGCAGCAGTCGTGGAACCTCTCCTTTAGAAGGGGCCTTTTTGATAGAGAATTAGGCAGTTGGGTGGCTTTGGTGGAGAAGATTAACCTTGTGAGACTGGGGGATGGCCAAGATAGCATAAGATGGTCCCTCGATAGTTCTGGAAGTTCAGCCGGTGGTCTCTTTCTCCCTCAGCCTGCAGGTTATGTCTTAAGTCCGAGGAAGCTTTAG

Coding sequence (CDS)

ATGACTCAAAGAGAATTTAACTACATTAAGAAGTGTGCAAGTACTTCCCTCCTAAAAGCTCCCAAGTCTATCATCAAGGCTATGGAAAAAGTGACCAGAGATTTTGTCTGGGGTGAGGGTAGCTACAAGCCCGGTGCAGATTTGGTTAAATGGGAGTGGTCTGCTTTGCCCATTAACCATGGCGGGCTCGGGGTGGGATCCTTGGAGCAAAGAAATACTTCTCTGATGATTAAATGGTTGTGGCGATTCTCTCAAGAGAGAGATTCTTTGTGGAGAAGAGTCATTAGTAGTATCTACGACATTTCTTACCTTGGGTGGAAACCCGACTTGCTGAGAGGGAGAAAAGGCAACAGACTGTGGGTGGACATTGCGTCTGACTTCCCCCCATTTGAGCAGTTCACGACTTTCACAGCTGATTGTGGAAGAAACATTAGGTTTTGGGAGGATAGATGGTGTGATGCTCAGCCCCTTAAAGATCTCTTCTCCAACTTGTATTTGATTTCTCAAAAGAAGAATGCTCCCATCGCGAGTGCTGGAATGGAGAGCAGCAGTCGTGGAACCTCTCCTTTAGAAGGGCAACAGACTCCCCTTAAAGATCTCTTCTCCAACTTGTATTTGATTTCTCAAAAGAAGAATGCTCCCATCGCGAGTGCTGGAATGGAGAGCAGCAGTCGTGGAACCTCTCCTTTAGAAGGGCAACAGACTCCCCTTAAAGATCTCTTCTCCAACTTGTATTTGATTTCTCAAAAGAAGAATGCTCCCATCGCTGAGTGCTGGAATGGAGAGCAGCAGTCGTGGAACCTCTCCTTTAGAAGGGGCCTTTTTGATAGAGAATTAGGCAGTTGGGTGGCTTTGGTGGAGAAGATTAACCTTGTGAGACTGGGGGATGGCCAAGATAGCATAAGATGGTCCCTCGATAGTTCTGGAAGTTCAGCCGGTGGTCTCTTTCTCCCTCAGCCTGCAGGTTATGTCTTAAGTCCGAGGAAGCTTTAG

Protein sequence

MTQREFNYIKKCASTSLLKAPKSIIKAMEKVTRDFVWGEGSYKPGADLVKWEWSALPINHGGLGVGSLEQRNTSLMIKWLWRFSQERDSLWRRVISSIYDISYLGWKPDLLRGRKGNRLWVDIASDFPPFEQFTTFTADCGRNIRFWEDRWCDAQPLKDLFSNLYLISQKKNAPIASAGMESSSRGTSPLEGQQTPLKDLFSNLYLISQKKNAPIASAGMESSSRGTSPLEGQQTPLKDLFSNLYLISQKKNAPIAECWNGEQQSWNLSFRRGLFDRELGSWVALVEKINLVRLGDGQDSIRWSLDSSGSSAGGLFLPQPAGYVLSPRKL

Homology

[Close]

BLAST of Lag0017472 vs. NCBI nr
Match: XP_022158566.1 (uncharacterized protein LOC111025019 [Momordica charantia])

HSP 1 Score: 151.0 bits (380), Expect = 1.8e-32
Identity = 65/165 (39.39%), Postives = 98/165 (59.39%), Query Frame = 0


Query: 19  KAPKSIIKAMEKVTRDFVWGEGSYKPGADLVKWEWSALPINHGGLGVGSLEQRNTSLMIK 78
           KAP SI K M K+ RD  W   +     +LVKW+ S+LP+  GGLG+G+   +N +L++K
Sbjct: 188 KAPVSITKEMNKIVRDLFWSGATSHGCKNLVKWDISSLPMKLGGLGIGAFPPKNNALLMK 247

Query: 79  WLWRFSQERDSLWRRVISSIYDISYLGWKPDLLRGRKGNRLWVDIASDFPPFEQFTTFTA 138
           WLW F++E ++LWRRVI+SIY +   GW     +G+   R W DIA +   F++   F A
Sbjct: 248 WLWHFTREENALWRRVIASIYGVDKYGWLTKAPKGKAKGRPWFDIAKNLSAFQEMVVFKA 307

Query: 139 DCGRNIRFWEDRWCDAQPLKDLFSNLYLISQKKNAPIASAGMESS 184
           + G  + FW D+W    PL D F +++ +S K+NA +     E +
Sbjct: 308 NQGDRLSFWMDKWAGNLPLLDEFPDMFALSLKQNAYVKDCWNEEN 352

[Close]

BLAST of Lag0017472 vs. NCBI nr
Match: RVW65502.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 137.5 bits (345), Expect = 2.1e-28
Identity = 64/158 (40.51%), Postives = 88/158 (55.70%), Query Frame = 0


Query: 16   SLLKAPKSIIKAMEKVTRDFVWGEGSYKPGADLVKWEWSALPINHGGLGVGSLEQRNTSL 75
            SL   P+ +   +EK+ RDF+WG G+      LV+W    L    GGLGV +L   N +L
Sbjct: 920  SLFHLPRKVRMRLEKIQRDFLWGGGTLTHKPHLVRWNLICLEKRKGGLGVRNLSLMNNAL 979

Query: 76   MIKWLWRFSQERDSLWRRVISSIYDISYLGWKPDLLRGRKGNRLWVDIASDFPPFEQFTT 135
            + KW WRF+ ERD+LWR VIS  YD+   GW    + GR G  LW  I   +  F+    
Sbjct: 980  LCKWNWRFANERDALWRSVISLKYDVEEGGWCTRDVLGRNGVGLWKAIRKKWGLFDGRVA 1039

Query: 136  FTADCGRNIRFWEDRWCDAQPLKDLFSNLYLISQKKNA 174
            F    G+ ++FW+D+WC   PL + F +L+ IS  KNA
Sbjct: 1040 FHLGNGQRVKFWKDKWCGDGPLCESFPSLFSISMSKNA 1077

[Close]

BLAST of Lag0017472 vs. NCBI nr
Match: RVW13558.1 (putative ribonuclease H protein [Vitis vinifera])

HSP 1 Score: 136.3 bits (342), Expect = 4.6e-28
Identity = 64/172 (37.21%), Postives = 95/172 (55.23%), Query Frame = 0


Query: 16  SLLKAPKSIIKAMEKVTRDFVWGEGSYKPGADLVKWEWSALPINHGGLGVGSLEQRNTSL 75
           SL   PK +   +EK+ RDF+WG G+ +    LV+W+        GGLG+ +L   N +L
Sbjct: 19  SLFVIPKRVCARLEKIQRDFLWGGGALENKPHLVRWKVICAAKKDGGLGIRNLAIFNKAL 78

Query: 76  MIKWLWRFSQERDSLWRRVISSIYDISYLGWKPDLLRGRKGNRLWVDIASDFPPFEQFTT 135
           + KWLWRF+ E DSLW+++ISS YD+   GW     R R G  +W  I + +  F   + 
Sbjct: 79  LGKWLWRFANENDSLWKQIISSKYDLQDGGWCSKGGRDRYGVGVWKAIRNGWEDFRSHSR 138

Query: 136 FTADCGRNIRFWEDRWCDAQPLKDLFSNLYLISQKKNAPIASAGMESSSRGT 188
           F    G  ++FW+D WCD Q L++ F  L+ +S  K   +A A  E  + G+
Sbjct: 139 FLVGDGTRVKFWKDLWCDNQSLEEAFPILFNLSVNKEGLVAEAWEEDGAGGS 190

[Close]

BLAST of Lag0017472 vs. NCBI nr
Match: RVW71569.1 (putative ribonuclease H protein [Vitis vinifera])

HSP 1 Score: 136.0 bits (341), Expect = 6.0e-28
Identity = 65/182 (35.71%), Postives = 99/182 (54.40%), Query Frame = 0


Query: 16  SLLKAPKSIIKAMEKVTRDFVWGEGSYKPGADLVKWEWSALPINHGGLGVGSLEQRNTSL 75
           SL   PK +   +EK+ RDF+WG G+ +    LV W+        GGLG+ +L   N +L
Sbjct: 160 SLFVIPKRVCARLEKIQRDFLWGGGALENKPHLVCWKVICAAKKDGGLGIRNLAIFNKAL 219

Query: 76  MIKWLWRFSQERDSLWRRVISSIYDISYLGWKPDLLRGRKGNRLWVDIASDFPPFEQFTT 135
           + KWLWRF+ E +SLW+++ISS YD+   GW    +R R G  +W  I + +  F   + 
Sbjct: 220 LGKWLWRFANENESLWKQIISSKYDLQDGGWCSKGVRDRYGVGVWKAIRNGWENFRSHSR 279

Query: 136 FTADCGRNIRFWEDRWCDAQPLKDLFSNLYLISQKKNAPIASAGMESSSRGTSPLEGQQT 195
           F    G  ++FW+D WC+ Q L++ F  L+ +S  K   +A A  E  +RG+  L    T
Sbjct: 280 FLVGDGTRVKFWKDLWCENQSLEEAFPILFNLSVNKEGLVAEAWEEDGARGSWGLVSTDT 339

Query: 196 PL 198
            +
Sbjct: 340 SM 341

[Close]

BLAST of Lag0017472 vs. NCBI nr
Match: RVW13061.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 136.0 bits (341), Expect = 6.0e-28
Identity = 63/158 (39.87%), Postives = 88/158 (55.70%), Query Frame = 0


Query: 16   SLLKAPKSIIKAMEKVTRDFVWGEGSYKPGADLVKWEWSALPINHGGLGVGSLEQRNTSL 75
            SL   P+ +   +EK+ RDF+WG G+      LV+W    L    GGLGV +L   N +L
Sbjct: 975  SLFHLPRKVRLRLEKIQRDFLWGGGTLAHKPHLVRWNLVCLEKRKGGLGVRNLSLMNNAL 1034

Query: 76   MIKWLWRFSQERDSLWRRVISSIYDISYLGWKPDLLRGRKGNRLWVDIASDFPPFEQFTT 135
            + KW WRF+ ERD+LWR VIS  Y +   GW    + GR G  LW  I   +  F+    
Sbjct: 1035 LCKWNWRFANERDALWRSVISLKYGVEEGGWCTRDVLGRNGVGLWKAIRKKWGLFDGRVA 1094

Query: 136  FTADCGRNIRFWEDRWCDAQPLKDLFSNLYLISQKKNA 174
            F    G+ ++FW+D+WC  +PL + F +L+ IS  KNA
Sbjct: 1095 FHLGNGQRVKFWKDKWCGDEPLCESFPSLFSISMSKNA 1132

[Close]

BLAST of Lag0017472 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 6.5e-17
Identity = 47/148 (31.76%), Postives = 72/148 (48.65%), Query Frame = 0


Query: 14  STSLLKAPKSIIKAMEKVTRDFVWGEGSYKPGADLVKWEWSALPINHGGLGVGSLEQRNT 73
           S S +  P+SI+  +++++R F+WG  + K    LVKW     P   GGLGV + +  N 
Sbjct: 52  SMSTILLPQSILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNR 111

Query: 74  SLMIKWLWRFSQERDSLWRRVISSIYDISYLGWKPDLLRGRKGNRLWVDIASDF-PPFEQ 133
           +L+ K  WR  QE++SLW  V+   Y +  +     L+     +  W  IA         
Sbjct: 112 ALISKVGWRLLQEKNSLWTLVLQKKYHVGEIRDSRWLIPKGSWSSTWRSIAIGLRDVVSH 171

Query: 134 FTTFTADCGRNIRFWEDRWCDAQPLKDL 161
              +    G+ IRFW DRW   +PL +L
Sbjct: 172 GVGWIPGDGQQIRFWTDRWVSGKPLLEL 199

[Close]

BLAST of Lag0017472 vs. ExPASy TrEMBL
Match: A0A803P465 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 4.7e-34
Identity = 102/300 (34.00%), Postives = 133/300 (44.33%), Query Frame = 0


Query: 16   SLLKAPKSIIKAMEKVTRDFVWGEGSYKPGADLVKWEWSALPINHGGLGVGSLEQRNTSL 75
            SL KAP+S+ KA+EK+ RDF+W       G  LV W+    P + GGLG+G LE RN SL
Sbjct: 1510 SLFKAPRSVTKALEKMMRDFLWEGSESSGGEHLVAWDEVCRPRHEGGLGIGRLELRNKSL 1569

Query: 76   MIKWLWRFSQERDSLWRRVISSIYDISYLGWKPDLLRGRKGNRL-----WVDIASDFPPF 135
            ++KWLWRF  E++SLW RV+ S Y     G   +L   +KG+RL     W DI+  +  F
Sbjct: 1570 LMKWLWRFPLEQNSLWHRVVVSRY-----GRADNLWDSKKGSRLSPKGPWRDISDLYDEF 1629

Query: 136  EQFTTFTADCGRNIRFWEDRWCDAQPLKDLFSNLYLISQKKNAPIASAGMESSSRGTSPL 195
                 F    G  IRFWED W D  PL   F +L +IS                      
Sbjct: 1630 LGLVHFKLGRGDRIRFWEDVWIDDYPLVSAFPDLAVIS---------------------- 1689

Query: 196  EGQQTPLKDLFSNLYLISQKKNAPIASAGMESSSRGTSPLEGQQTPLKDLFSNLYLISQK 255
            EG+ TP+K+L              I   G+                              
Sbjct: 1690 EGRNTPIKEL--------------IVDEGLP----------------------------- 1730

Query: 256  KNAPIAECWNGEQQSWNLSFRRGLFDRELGSWVALVEKINLVR-LGDGQDSIRWSLDSSG 310
                      G  +SWN  FRR L DREL S ++L++K+  VR L   +DS  W  D SG
Sbjct: 1750 ---------GGWVESWNFKFRRNLMDRELPSLISLMQKVEHVRVLSISEDSRIWKPDPSG 1730

[Close]

BLAST of Lag0017472 vs. ExPASy TrEMBL
Match: A0A6J1E196 (uncharacterized protein LOC111025019 OS=Momordica charantia OX=3673 GN=LOC111025019 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 8.8e-33
Identity = 65/165 (39.39%), Postives = 98/165 (59.39%), Query Frame = 0


Query: 19  KAPKSIIKAMEKVTRDFVWGEGSYKPGADLVKWEWSALPINHGGLGVGSLEQRNTSLMIK 78
           KAP SI K M K+ RD  W   +     +LVKW+ S+LP+  GGLG+G+   +N +L++K
Sbjct: 188 KAPVSITKEMNKIVRDLFWSGATSHGCKNLVKWDISSLPMKLGGLGIGAFPPKNNALLMK 247

Query: 79  WLWRFSQERDSLWRRVISSIYDISYLGWKPDLLRGRKGNRLWVDIASDFPPFEQFTTFTA 138
           WLW F++E ++LWRRVI+SIY +   GW     +G+   R W DIA +   F++   F A
Sbjct: 248 WLWHFTREENALWRRVIASIYGVDKYGWLTKAPKGKAKGRPWFDIAKNLSAFQEMVVFKA 307

Query: 139 DCGRNIRFWEDRWCDAQPLKDLFSNLYLISQKKNAPIASAGMESS 184
           + G  + FW D+W    PL D F +++ +S K+NA +     E +
Sbjct: 308 NQGDRLSFWMDKWAGNLPLLDEFPDMFALSLKQNAYVKDCWNEEN 352

[Close]

BLAST of Lag0017472 vs. ExPASy TrEMBL
Match: A0A2N9I472 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46746 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.7e-31
Identity = 67/169 (39.64%), Postives = 96/169 (56.80%), Query Frame = 0


Query: 16   SLLKAPKSIIKAMEKVTRDFVWGEGSYKPGADLVKWEWSALPINHGGLGVGSLEQRNTSL 75
            SL   P S+   +EK+ R+F+WG         LV W+    PI +GGLGV  +   N +L
Sbjct: 1072 SLFTIPVSVANRIEKIQRNFLWGGQGEVVNPHLVNWDTVCSPITYGGLGVRKIVPFNKAL 1131

Query: 76   MIKWLWRFSQERDSLWRRVISSIYDISYLGWKPDLLRGRKGNRLWVDIASDFPPFEQFTT 135
            + KWLWRF  E   LWRR I++ Y ++  GW    +RG  G  LW  I+S +  F  F  
Sbjct: 1132 LGKWLWRFGVEETRLWRRAIATKYGVNEGGWSTRKIRGAHGCGLWRSISSIWADFVSFVD 1191

Query: 136  FTADCGRNIRFWEDRWCDAQPLKDLFSNLYLISQKKNAPIASAGMESSS 185
            +    G  IRFW DRWC  +PLKD+F +L++ +  +NA +AS  ++S+S
Sbjct: 1192 YEVGVGDRIRFWFDRWCGDRPLKDVFPDLFVCATNRNATVASLFLQSAS 1240

[Close]

BLAST of Lag0017472 vs. ExPASy TrEMBL
Match: A0A2N9J9V5 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61267 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.7e-31
Identity = 67/169 (39.64%), Postives = 96/169 (56.80%), Query Frame = 0


Query: 16   SLLKAPKSIIKAMEKVTRDFVWGEGSYKPGADLVKWEWSALPINHGGLGVGSLEQRNTSL 75
            SL   P S+   +EK+ R+F+WG         LV W+    PI +GGLGV  +   N +L
Sbjct: 1235 SLFTIPVSVANRIEKIQRNFLWGGQGEVVNPHLVNWDTVCSPITYGGLGVRKIVPFNKAL 1294

Query: 76   MIKWLWRFSQERDSLWRRVISSIYDISYLGWKPDLLRGRKGNRLWVDIASDFPPFEQFTT 135
            + KWLWRF  E   LWRR I++ Y ++  GW    +RG  G  LW  I+S +  F  F  
Sbjct: 1295 LGKWLWRFGVEETRLWRRAIATKYGVNEGGWSTRKIRGAHGCGLWRSISSIWADFVSFVD 1354

Query: 136  FTADCGRNIRFWEDRWCDAQPLKDLFSNLYLISQKKNAPIASAGMESSS 185
            +    G  IRFW DRWC  +PLKD+F +L++ +  +NA +AS  ++S+S
Sbjct: 1355 YEVGVGDRIRFWFDRWCGDRPLKDVFPDLFVCATNRNATVASLFLQSAS 1403

[Close]

BLAST of Lag0017472 vs. ExPASy TrEMBL
Match: A0A2N9EGL0 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1765 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.2e-31
Identity = 68/169 (40.24%), Postives = 92/169 (54.44%), Query Frame = 0


Query: 16   SLLKAPKSIIKAMEKVTRDFVWGEGSYKPGADLVKWEWSALPINHGGLGVGSLEQRNTSL 75
            SL   P S+   +E++ R+F+WG    +    LV W+    PINHGGLGV  +   N +L
Sbjct: 1338 SLFTIPISVANRLERIQRNFLWGSYGDEVTTHLVNWDIVCSPINHGGLGVRKIAVFNKAL 1397

Query: 76   MIKWLWRFSQERDSLWRRVISSIYDISYLGWKPDLLRGRKGNRLWVDIASDFPPFEQFTT 135
            + KWLWRF  E   LWRR I+S Y ++  GW    +RG  G  LW  I S +  F  +  
Sbjct: 1398 LGKWLWRFGLEESRLWRRGIASKYGVNSGGWTTKSIRGSHGCGLWRSINSGWSDFAPYVD 1457

Query: 136  FTADCGRNIRFWEDRWCDAQPLKDLFSNLYLISQKKNAPIASAGMESSS 185
            F    G  + FW DRWC  +PLKD+F +LY  +  + A IAS    S+S
Sbjct: 1458 FVVGTGDRVLFWSDRWCGDRPLKDVFPDLYACASNRQATIASTLTRSAS 1506

The following BLAST results are available for this feature:

BLAST of Lag0017472 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158566.1	1.8e-32	39.39	uncharacterized protein LOC111025019 [Momordica charantia]	[more]
RVW65502.1	2.1e-28	40.51	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]
RVW13558.1	4.6e-28	37.21	putative ribonuclease H protein [Vitis vinifera]	[more]
RVW71569.1	6.0e-28	35.71	putative ribonuclease H protein [Vitis vinifera]	[more]
RVW13061.1	6.0e-28	39.87	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]

BLAST of Lag0017472 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C2F6	6.5e-17	31.76	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of Lag0017472 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A803P465	4.7e-34	34.00	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A6J1E196	8.8e-33	39.39	uncharacterized protein LOC111025019 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A2N9I472	1.7e-31	39.64	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46746 PE=4 SV=1	[more]
A0A2N9J9V5	1.7e-31	39.64	Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F...	[more]
A0A2N9EGL0	2.2e-31	40.24	Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F...	[more]

BLAST of Lag0017472 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36617	PROTEIN, PUTATIVE-RELATED	coord: 135..179 coord: 235..310

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0017472.1	Lag0017472.1	mRNA