Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTTAGCAGTCTACACAATGAATTGTTTCAAATTGCCAGTATCGATATGCAAGGAGATTGATAGGAAACTTGCAACCTTCTGGTGGCAGACGGAAAATGGGAAAAGGGGCATCCATTGGGGTGCCTGGAAGGCGTTGACTGACCATAAACACAAGGGCAGATTGAACTTCAAGGAGATCCATAACTTCAACCTTGCACTGCTTGTTAAACAGGGTTGACGAGTATTGACTGAGCCTGAGAGCCTTTTGGCAAGAATGTATAGAGCAAAATACCTCTGAAGATATTCGTTCTGGGATGTGGAGGTGGCAAGTGGTGCATCATGGGGATGGCGAAGTATTTTGGCAGGAAGGACTGTCCTCAAGCATGGATTTCGCTGGCAGATTGGAAGCAATTCGAAAATAAACATCTGGGAAGATCCATGGTTGCCGAGACTGACCACATATAAGCCATGAAGATTCCTAGACAGTTCTTGGAGGGGAGTACATGAGCTGATTGACCAGAGTGAGCAGAGGTGGCTAGAAGAAAGAGTGAGGAAATGTTTCTGTCATGACGACGCTGAGTTAGTATTGGCAATCCCGCTAAATAGCAAACAGGTCCAGGATCGAGCAGTATGACACTATACGAATTCAGGAGTGTATACTGTGAAATCCGGATATCAAACAACCTTACAACTCAAGGCTGGTGGGGAAGCTAGTGAGGGAAATCCGGTGCAGCCCTTGTGGAAAGAATTATGGTGATTGCCTTGCCCGCAGAAAGTGAAGTGCTTTGTATGGAGAACATGTAAAAATTATCTTGCAGTGAATGACAATCTGAAGCACAGTAATTTACGTGAGGAGGGATGCTAAAGTCTGCGGGGAGGTTGAATTTGTCAACCATGTCCTCTTGGAGTGTAGCCCTGCACGTGCATTCTGGTTTGGATCACATTTGCAACTTGATACCATGGGTTTTAGAGGCCAGTCTTTTCTGGATAGTTGGAATAGAATTACCAGCCAGTTGGCGGGTGTGGATCAGGCAGAGGAAAATGTCAGCTTTCTTGCATTTGGGCTGTGGAGACTGTGGAAGGCACACAATGAGAATACCTTCGTAAATAAGGTGTTGGATGTTCAACTCTGCATTAAACTGATAGAAGCTGATGTCCGTGAGTTTAAACAGGCCTTGGTAGATGAAAGGCAGCCTGAGGTGTTACAAGGTGATCTGGCAGGACCGATGTTGGCTTTGGATGATGAAAAGCCAGTGTTGTGGGTTGATGTCGCCTGGAATAAAGATTCCTTTGCTACTGGTTTTGGATGGGTACTGTGGAATTCTGTGCTAAAAGCTTTTGAGGAAGGTGAGCAAAGAGGTGGTAATAGCCTGAACAGTCTGCATGCAGAAGGTAAGACTTTGAAATGGGGCCTGGAGTGCGTTTGGATCAGAGGTCTTAGAGAGATATGA
mRNA sequence
ATGGCTTTAGCAGTCTACACAATGAATTGTTTCAAATTGCCAGTATCGATATGCAAGGAGATTGATAGGAAACTTGCAACCTTCTGGTGGCAGACGGAAAATGGGAAAAGGGGCATCCATTGGGGTGCCTGGAAGGCGTTGACTGACCATAAACACAAGGGCAGATTGAACTTCAAGGAGATCCATAACTTCAACCTTGCACTGCTTGTTAAACAGGGTGGCAAGTGGTGCATCATGGGGATGGCGAAGTATTTTGGCAGGAAGGACTGTCCTCAAGCATGGATTTCGCTGGCAGATTGGAAGCAATTCGAAAATAAACATCTGGGAAGATCCATGAGTGAGCAGAGGTGGCTAGAAGAAAGAGTGAGGAAATGTTTCTGTCATGACGACGCTGAGTTAGTATTGGCAATCCCGCTAAATAGCAAACAGGCTGGTGGGGAAGCTAGTGAGGGAAATCCGGTGCAGCCCTTGTGGAAAGAATTATGCACAGTAATTTACGTGAGGAGGGATGCTAAAGTCTGCGGGGAGGTTGAATTTGTCAACCATGTCCTCTTGGAGTGTAGCCCTGCACGTGCATTCTGGTTTGGATCACATTTGCAACTTGATACCATGGGTTTTAGAGGCCAGTCTTTTCTGGATAGTTGGAATAGAATTACCAGCCAGTTGGCGGGTGTGGATCAGGCAGAGGAAAATGTCAGCTTTCTTGCATTTGGGCTGTGGAGACTGTGGAAGGCACACAATGAGAATACCTTCGTAAATAAGGTGTTGGATGTTCAACTCTGCATTAAACTGATAGAAGCTGATGTCCGTGAGTTTAAACAGGCCTTGGTAGATGAAAGGCAGCCTGAGGTGTTACAAGGTGATCTGGCAGGACCGATGTTGGCTTTGGATGATGAAAAGCCAGTGTTGTGGGTTGATGTCGCCTGGAATAAAGATTCCTTTGCTACTGGTTTTGGATGGGTACTGTGGAATTCTGTGCTAAAAGCTTTTGAGGAAGGTGAGCAAAGAGGTGGTAATAGCCTGAACAGTCTGCATGCAGAAGGTAAGACTTTGAAATGGGGCCTGGAGTGCGTTTGGATCAGAGGTCTTAGAGAGATATGA
Coding sequence (CDS)
ATGGCTTTAGCAGTCTACACAATGAATTGTTTCAAATTGCCAGTATCGATATGCAAGGAGATTGATAGGAAACTTGCAACCTTCTGGTGGCAGACGGAAAATGGGAAAAGGGGCATCCATTGGGGTGCCTGGAAGGCGTTGACTGACCATAAACACAAGGGCAGATTGAACTTCAAGGAGATCCATAACTTCAACCTTGCACTGCTTGTTAAACAGGGTGGCAAGTGGTGCATCATGGGGATGGCGAAGTATTTTGGCAGGAAGGACTGTCCTCAAGCATGGATTTCGCTGGCAGATTGGAAGCAATTCGAAAATAAACATCTGGGAAGATCCATGAGTGAGCAGAGGTGGCTAGAAGAAAGAGTGAGGAAATGTTTCTGTCATGACGACGCTGAGTTAGTATTGGCAATCCCGCTAAATAGCAAACAGGCTGGTGGGGAAGCTAGTGAGGGAAATCCGGTGCAGCCCTTGTGGAAAGAATTATGCACAGTAATTTACGTGAGGAGGGATGCTAAAGTCTGCGGGGAGGTTGAATTTGTCAACCATGTCCTCTTGGAGTGTAGCCCTGCACGTGCATTCTGGTTTGGATCACATTTGCAACTTGATACCATGGGTTTTAGAGGCCAGTCTTTTCTGGATAGTTGGAATAGAATTACCAGCCAGTTGGCGGGTGTGGATCAGGCAGAGGAAAATGTCAGCTTTCTTGCATTTGGGCTGTGGAGACTGTGGAAGGCACACAATGAGAATACCTTCGTAAATAAGGTGTTGGATGTTCAACTCTGCATTAAACTGATAGAAGCTGATGTCCGTGAGTTTAAACAGGCCTTGGTAGATGAAAGGCAGCCTGAGGTGTTACAAGGTGATCTGGCAGGACCGATGTTGGCTTTGGATGATGAAAAGCCAGTGTTGTGGGTTGATGTCGCCTGGAATAAAGATTCCTTTGCTACTGGTTTTGGATGGGTACTGTGGAATTCTGTGCTAAAAGCTTTTGAGGAAGGTGAGCAAAGAGGTGGTAATAGCCTGAACAGTCTGCATGCAGAAGGTAAGACTTTGAAATGGGGCCTGGAGTGCGTTTGGATCAGAGGTCTTAGAGAGATATGA
Protein sequence
MALAVYTMNCFKLPVSICKEIDRKLATFWWQTENGKRGIHWGAWKALTDHKHKGRLNFKEIHNFNLALLVKQGGKWCIMGMAKYFGRKDCPQAWISLADWKQFENKHLGRSMSEQRWLEERVRKCFCHDDAELVLAIPLNSKQAGGEASEGNPVQPLWKELCTVIYVRRDAKVCGEVEFVNHVLLECSPARAFWFGSHLQLDTMGFRGQSFLDSWNRITSQLAGVDQAEENVSFLAFGLWRLWKAHNENTFVNKVLDVQLCIKLIEADVREFKQALVDERQPEVLQGDLAGPMLALDDEKPVLWVDVAWNKDSFATGFGWVLWNSVLKAFEEGEQRGGNSLNSLHAEGKTLKWGLECVWIRGLREI
Homology
BLAST of Lag0017459 vs. NCBI nr
Match:
CAB4274760.1 (unnamed protein product [Prunus armeniaca])
HSP 1 Score: 163.7 bits (413), Expect = 3.0e-36
Identity = 128/474 (27.00%), Postives = 191/474 (40.30%), Query Frame = 0
Query: 1 MALAVYTMNCFKLPVSICKEIDRKLATFWWQTENGKRGIHWGAWKALTDHKHKGRLNFKE 60
MA+ YTM+CFKLPV++CKEI+ +A FWW++ + K GIHW +W L+ K G L F++
Sbjct: 709 MAMPCYTMSCFKLPVTLCKEIEAAMARFWWKSHSDKNGIHWASWTKLSQLKKAGGLGFRD 768
Query: 61 IHNFNLALLVKQGGKWCIMGMA----------KYF---------GRKDCPQAWISLAD-- 120
+ FN+ALL K G W I+ KYF +K W +
Sbjct: 769 LQCFNMALLAKIG--WRILHNPSSLLACLLHDKYFVGASFLTATSQKSSSWGWKGILQGR 828
Query: 121 --------WK-------QFEN------KHLGRSMSE----------------QRWLEERV 180
W+ Q N + R++S + W ++ V
Sbjct: 829 RLLESGLRWRIGDGTTVQVRNDPWLPTPYTFRTLSRHPDLPYMVHELIDPLLKTWKKDVV 888
Query: 181 RKCFCHDDAELVLAIPLN------------------------------------SKQAGG 240
+CF ++A +L+IP++ ++ G
Sbjct: 889 NRCFVPEEATHILSIPISRWGCPDKLIWHFNMHGRYTVRSGYELALHLQRNGELGRKGAG 948
Query: 241 EASEGNPVQPLWKEL----------------CTVIYV------RRDAKVCGEVEFVN--- 300
EAS + +WK + C+ I RR GE F
Sbjct: 949 EASSSSSQSSVWKSVWHVDAPPKLKAFIWCGCSNILAVRHNLHRRRVPCTGECGFCGFQD 1008
Query: 301 ----HVLLECSPARAFWFGSHLQLDTMGFRGQSFLDSWNRITSQLAGVDQAEENVSFLAF 342
H+ EC ARAFWF S LQLD G+ F+ +W + + L + A E + + F
Sbjct: 1009 ETQAHIFFECDFARAFWFASPLQLDVSKLAGEDFISTWQHMMTTLNSSEHAAEAIQWFVF 1068
BLAST of Lag0017459 vs. NCBI nr
Match:
CAB4303756.1 (unnamed protein product [Prunus armeniaca])
HSP 1 Score: 155.2 bits (391), Expect = 1.1e-33
Identity = 122/470 (25.96%), Postives = 185/470 (39.36%), Query Frame = 0
Query: 1 MALAVYTMNCFKLPVSICKEIDRKLATFWWQTENGKRGIHWGAWKALTDHKHKGRLNFKE 60
MA+ YTM+ FKLPV++CKEI+ +A FWW++ K IHW +W L+ K G L F++
Sbjct: 381 MAMPCYTMSSFKLPVTLCKEIEAAMARFWWKSHTDKNDIHWASWTKLSQLKKVGGLGFRD 440
Query: 61 IHNFNLALLVKQGGKWCIMGMA----------KYF---------GRKDCPQAWISLAD-- 120
+ FN+ LL K G W I+ KYF +K W +
Sbjct: 441 LQCFNMTLLAKIG--WRILHNPSSLLACLLHDKYFVGASFLTATSQKSSSWGWKGILQGR 500
Query: 121 --------WK-------QFEN------KHLGRSMSE----------------QRWLEERV 180
W+ Q N + R++S + W ++ +
Sbjct: 501 RLLESGLRWRIGDGTTVQVRNDPWLPTPYTFRTLSRHPDLPSMVHELIDPLLKTWKKDVI 560
Query: 181 RKCFCHDDAELVLAIPLN------------------------------------SKQAGG 240
+CF ++A +L+IP++ ++ G
Sbjct: 561 NRCFVPEEASHILSIPISRWGCPDKLIWHFSMHGRYTVRSGYELALHLQRNGELGRKGAG 620
Query: 241 EASEGNPVQPLWKEL----------------CTVIYV------RRDAKVCGEVEFVN--- 300
EAS + +WK + C+ I RR GE F
Sbjct: 621 EASSSSSQSSVWKSVWHVDAPPKLKAFIWRGCSNILAVRHNLRRRRVPYTGECGFCGFQD 680
Query: 301 ----HVLLECSPARAFWFGSHLQLDTMGFRGQSFLDSWNRITSQLAGVDQAEENVSFLAF 342
H+ EC ARAFWF S LQLD G+ F+ +W + + L + A E + + F
Sbjct: 681 ETQAHIFFECDFARAFWFASPLQLDVSKLAGEDFISTWQHMMTTLNSSEHAAEAIQWFVF 740
BLAST of Lag0017459 vs. NCBI nr
Match:
XP_028948114.1 (uncharacterized protein LOC114820933 [Malus domestica])
HSP 1 Score: 138.3 bits (347), Expect = 1.4e-28
Identity = 119/504 (23.61%), Postives = 191/504 (37.90%), Query Frame = 0
Query: 1 MALAVYTMNCFKLPVSICKEIDRKLATFWWQTENGKRGIHWGAWKALTDHKHKGRLNFKE 60
MAL Y M+CFKLP+ +C++++R + +WW+ + K+G+HW +W L HK G L FK+
Sbjct: 770 MALPNYAMSCFKLPIGVCRDVERAIRNYWWRGNDQKKGVHWISWDRLMRHKKLGGLGFKD 829
Query: 61 IHNFNLALLVKQGGKWCIMG----------MAKYFGRKDCPQA---------WISLAD-- 120
I FNLA L K G W I+ KYF K +A W + +
Sbjct: 830 IQCFNLAFLAKIG--WRIIQNPSSLLAFVLREKYFPEKTFREAGKGKNTSWGWKGIFEAR 889
Query: 121 --------WKQFENKHLG-----------------------------RSMSEQRWLEERV 180
W+ + + + + W E +
Sbjct: 890 RVLQHGIRWRVGDGTKINIRDDPWFPKPTTFLVKPRDCLQETMVSDLIEPNSRSWKSEVI 949
Query: 181 RKCFCHDDAELVLAIPLN------------------------------------SKQAGG 240
+ F +D + +L+IPL+ K+ G
Sbjct: 950 MQGFNSEDTKHILSIPLSKFGCCDRLVWHHTVDGSYSVKTGYGVAVSLLENGVLGKKGRG 1009
Query: 241 EASEGNPVQPLWKELCTV-----------------IYVRRDAK--------VCGEVEFV- 300
S + +WK + + VR + K VCG V
Sbjct: 1010 VPSMHHNTNQVWKGIWNLQVPNKIKFFIWRCCNNAFAVRHNLKRRYMRIDNVCGVCNLVD 1069
Query: 301 ---NHVLLECSPARAFWFGSHLQLDTMGFRGQSFLDSWNRITSQLAGVDQAEENVSFLAF 360
NH+ C + WF S L L+ + G FLDSWN + + + AE + AF
Sbjct: 1070 ESENHLFFRCDLSHRLWFCSPLHLNCIELIGADFLDSWNIFCTSIKDREDAEAIMQEFAF 1129
Query: 361 GLWRLWKAHNENTFVNKVLDVQLCIKLIEADVREFKQAL----VDERQPEVLQGDLAGPM 367
GLWR+WK N+ F + + ++ E+++A+ +DE L+ + PM
Sbjct: 1130 GLWRIWKNRNDVVFKGSHCQPNEILTVWRKNIGEYREAMNHGSLDEGAVRPLK---SHPM 1189
BLAST of Lag0017459 vs. NCBI nr
Match:
XP_027169605.1 (uncharacterized protein LOC113769345 [Coffea eugenioides])
HSP 1 Score: 136.3 bits (342), Expect = 5.1e-28
Identity = 114/430 (26.51%), Postives = 175/430 (40.70%), Query Frame = 0
Query: 1 MALAVYTMNCFKLPVSICKEIDRKLATFWWQTENGKRGIHWGAWKALTDHKHKGRLNFKE 60
MA+ YTM+CFKL +CK+I L+ FWW ++ K IHW AW+ LT K G L FK+
Sbjct: 145 MAIPTYTMSCFKLRCRLCKDICSLLSKFWWGEQDNKGKIHWVAWEKLTKEKKNGGLGFKD 204
Query: 61 IHNFNLALLVKQGGKWCIMGMAKYFGRKDCPQAWISLADWKQFENKHLGRSMSEQR---W 120
+ +FN ALL KQ W I+ K + K F N + S + + W
Sbjct: 205 LQSFNRALLAKQ--IWRIIRNPNLLSSK--------VLKAKYFPNSCIQESKAPKNASWW 264
Query: 121 LEERVRKCFCHDDAELVLAIPLN----------SKQAGGE------------------AS 180
+ K FC +DA +L IP++ ++ GE
Sbjct: 265 NRPLIFKTFCKEDAHNILKIPISITGRYDNTFWTRNINGEYTVQCGYKMEMEKKEEVIRK 324
Query: 181 EGNPVQP-------------------------LWKELCTVIYVRR-----------DAKV 240
EG V+ +WK L + V+ V
Sbjct: 325 EGEGVETSFNSVSQQVWKVLWSLNISYKVKMFIWKCLSDAVPVKELIWRRIKRGDPICSV 384
Query: 241 CG-EVEFVNHVLLECSPARAFWFGSHLQLDTMGFRGQSFLDSWNRITSQLAGVDQAEENV 300
CG EVE + H+LL+CS + W + + D + +R F D W ++ + Q ++++
Sbjct: 385 CGEEVETLEHMLLKCSKVQDIWKLAPIHWDGIAYRADKFKDWWAGVSEARYRI-QGKDHI 444
Query: 301 SFLAFGLWRLWKAHNENTFVNKVLDVQLCIKLIEADVREFKQALVDERQPEVLQGDLAGP 352
A+ LW++WK+ N N F NK D I EF+ A R + +A
Sbjct: 445 GLTAYILWQIWKSRNNNVFNNKDRDPAAIINKACRAWGEFENATGKARHWRDGKIAVAQQ 504
BLAST of Lag0017459 vs. NCBI nr
Match:
CAB4269469.1 (unnamed protein product [Prunus armeniaca])
HSP 1 Score: 134.4 bits (337), Expect = 2.0e-27
Identity = 96/375 (25.60%), Postives = 145/375 (38.67%), Query Frame = 0
Query: 1 MALAVYTMNCFKLPVSICKEIDRKLATFWWQTENGKRGIHWGAWKALTDHKHKGRLNFKE 60
MA+ Y M+CF+LP+++CKEI+R++ +WW+ +GIHW W+ L+ K G + F++
Sbjct: 222 MAMPNYAMSCFQLPINLCKEIEREIIRYWWKGHKEHKGIHWVGWQRLSMLKEAGGIGFRD 281
Query: 61 IHNFNLALLVKQGGKWCIMG----------MAKYFGRKDCPQAWISLA---DWKQF--EN 120
+ FNLA+L K G W I+ KYF D A WK
Sbjct: 282 LRCFNLAMLAKIG--WRIIKNPDSLLATTYRDKYFRSSDFMSAGGGRGTSWGWKGILQGR 341
Query: 121 KHLGRSMSEQR--------------------------WLEERVRKCFCHDDAELVLAIPL 180
K L SM +R W + + +CF +A+ +L +PL
Sbjct: 342 KILEASMRWRRQWTSSSYLHPEIPVLVQGLIDDQTKMWNRDLILRCFNSAEAQTILPLPL 401
Query: 181 N--------------------------------SKQAG----GEASEGNPVQPLWKELCT 240
+ S + G GE S GN + WK +
Sbjct: 402 SRWGCDDRLVWHFTTHGGYSVRTGYELALTLRKSGELGGKTEGECSYGNDREKFWKSIWR 461
Query: 241 V----------------------------IYVRRDAKVCG-EVEFVNHVLLECSPARAFW 270
+ + V +CG E E H+ C AR FW
Sbjct: 462 LQVPPKLRAFVWRSCRNTLAVKGNLRRRSVDVDNTCVLCGYEGESQVHIFFRCEHARVFW 521
BLAST of Lag0017459 vs. ExPASy TrEMBL
Match:
A0A6J5UE59 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS23353 PE=4 SV=1)
HSP 1 Score: 163.7 bits (413), Expect = 1.5e-36
Identity = 128/474 (27.00%), Postives = 191/474 (40.30%), Query Frame = 0
Query: 1 MALAVYTMNCFKLPVSICKEIDRKLATFWWQTENGKRGIHWGAWKALTDHKHKGRLNFKE 60
MA+ YTM+CFKLPV++CKEI+ +A FWW++ + K GIHW +W L+ K G L F++
Sbjct: 709 MAMPCYTMSCFKLPVTLCKEIEAAMARFWWKSHSDKNGIHWASWTKLSQLKKAGGLGFRD 768
Query: 61 IHNFNLALLVKQGGKWCIMGMA----------KYF---------GRKDCPQAWISLAD-- 120
+ FN+ALL K G W I+ KYF +K W +
Sbjct: 769 LQCFNMALLAKIG--WRILHNPSSLLACLLHDKYFVGASFLTATSQKSSSWGWKGILQGR 828
Query: 121 --------WK-------QFEN------KHLGRSMSE----------------QRWLEERV 180
W+ Q N + R++S + W ++ V
Sbjct: 829 RLLESGLRWRIGDGTTVQVRNDPWLPTPYTFRTLSRHPDLPYMVHELIDPLLKTWKKDVV 888
Query: 181 RKCFCHDDAELVLAIPLN------------------------------------SKQAGG 240
+CF ++A +L+IP++ ++ G
Sbjct: 889 NRCFVPEEATHILSIPISRWGCPDKLIWHFNMHGRYTVRSGYELALHLQRNGELGRKGAG 948
Query: 241 EASEGNPVQPLWKEL----------------CTVIYV------RRDAKVCGEVEFVN--- 300
EAS + +WK + C+ I RR GE F
Sbjct: 949 EASSSSSQSSVWKSVWHVDAPPKLKAFIWCGCSNILAVRHNLHRRRVPCTGECGFCGFQD 1008
Query: 301 ----HVLLECSPARAFWFGSHLQLDTMGFRGQSFLDSWNRITSQLAGVDQAEENVSFLAF 342
H+ EC ARAFWF S LQLD G+ F+ +W + + L + A E + + F
Sbjct: 1009 ETQAHIFFECDFARAFWFASPLQLDVSKLAGEDFISTWQHMMTTLNSSEHAAEAIQWFVF 1068
BLAST of Lag0017459 vs. ExPASy TrEMBL
Match:
A0A6J5WPU6 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS20372 PE=4 SV=1)
HSP 1 Score: 155.2 bits (391), Expect = 5.2e-34
Identity = 122/470 (25.96%), Postives = 185/470 (39.36%), Query Frame = 0
Query: 1 MALAVYTMNCFKLPVSICKEIDRKLATFWWQTENGKRGIHWGAWKALTDHKHKGRLNFKE 60
MA+ YTM+ FKLPV++CKEI+ +A FWW++ K IHW +W L+ K G L F++
Sbjct: 381 MAMPCYTMSSFKLPVTLCKEIEAAMARFWWKSHTDKNDIHWASWTKLSQLKKVGGLGFRD 440
Query: 61 IHNFNLALLVKQGGKWCIMGMA----------KYF---------GRKDCPQAWISLAD-- 120
+ FN+ LL K G W I+ KYF +K W +
Sbjct: 441 LQCFNMTLLAKIG--WRILHNPSSLLACLLHDKYFVGASFLTATSQKSSSWGWKGILQGR 500
Query: 121 --------WK-------QFEN------KHLGRSMSE----------------QRWLEERV 180
W+ Q N + R++S + W ++ +
Sbjct: 501 RLLESGLRWRIGDGTTVQVRNDPWLPTPYTFRTLSRHPDLPSMVHELIDPLLKTWKKDVI 560
Query: 181 RKCFCHDDAELVLAIPLN------------------------------------SKQAGG 240
+CF ++A +L+IP++ ++ G
Sbjct: 561 NRCFVPEEASHILSIPISRWGCPDKLIWHFSMHGRYTVRSGYELALHLQRNGELGRKGAG 620
Query: 241 EASEGNPVQPLWKEL----------------CTVIYV------RRDAKVCGEVEFVN--- 300
EAS + +WK + C+ I RR GE F
Sbjct: 621 EASSSSSQSSVWKSVWHVDAPPKLKAFIWRGCSNILAVRHNLRRRRVPYTGECGFCGFQD 680
Query: 301 ----HVLLECSPARAFWFGSHLQLDTMGFRGQSFLDSWNRITSQLAGVDQAEENVSFLAF 342
H+ EC ARAFWF S LQLD G+ F+ +W + + L + A E + + F
Sbjct: 681 ETQAHIFFECDFARAFWFASPLQLDVSKLAGEDFISTWQHMMTTLNSSEHAAEAIQWFVF 740
BLAST of Lag0017459 vs. ExPASy TrEMBL
Match:
A0A6J5U034 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS15037 PE=4 SV=1)
HSP 1 Score: 134.4 bits (337), Expect = 9.5e-28
Identity = 96/375 (25.60%), Postives = 145/375 (38.67%), Query Frame = 0
Query: 1 MALAVYTMNCFKLPVSICKEIDRKLATFWWQTENGKRGIHWGAWKALTDHKHKGRLNFKE 60
MA+ Y M+CF+LP+++CKEI+R++ +WW+ +GIHW W+ L+ K G + F++
Sbjct: 222 MAMPNYAMSCFQLPINLCKEIEREIIRYWWKGHKEHKGIHWVGWQRLSMLKEAGGIGFRD 281
Query: 61 IHNFNLALLVKQGGKWCIMG----------MAKYFGRKDCPQAWISLA---DWKQF--EN 120
+ FNLA+L K G W I+ KYF D A WK
Sbjct: 282 LRCFNLAMLAKIG--WRIIKNPDSLLATTYRDKYFRSSDFMSAGGGRGTSWGWKGILQGR 341
Query: 121 KHLGRSMSEQR--------------------------WLEERVRKCFCHDDAELVLAIPL 180
K L SM +R W + + +CF +A+ +L +PL
Sbjct: 342 KILEASMRWRRQWTSSSYLHPEIPVLVQGLIDDQTKMWNRDLILRCFNSAEAQTILPLPL 401
Query: 181 N--------------------------------SKQAG----GEASEGNPVQPLWKELCT 240
+ S + G GE S GN + WK +
Sbjct: 402 SRWGCDDRLVWHFTTHGGYSVRTGYELALTLRKSGELGGKTEGECSYGNDREKFWKSIWR 461
Query: 241 V----------------------------IYVRRDAKVCG-EVEFVNHVLLECSPARAFW 270
+ + V +CG E E H+ C AR FW
Sbjct: 462 LQVPPKLRAFVWRSCRNTLAVKGNLRRRSVDVDNTCVLCGYEGESQVHIFFRCEHARVFW 521
BLAST of Lag0017459 vs. ExPASy TrEMBL
Match:
A0A6J5VSP2 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51717 PE=4 SV=1)
HSP 1 Score: 129.4 bits (324), Expect = 3.0e-26
Identity = 101/361 (27.98%), Postives = 147/361 (40.72%), Query Frame = 0
Query: 25 LATFWWQTENGKRGIHWGAWKALTDHKHKGRLNFKEIHNFNLALLVKQGGKWCIMGMA-- 84
+A FWW++ K IHW +W L+ K G L F+++ FN+ALL K G W I+
Sbjct: 1 MARFWWKSHTDKNDIHWASWTKLSQLKKAGGLGFRDLQCFNMALLAKIG--WRILHNPSS 60
Query: 85 --------KYF---------GRKDCPQAWISLADWKQFENKHLGRSMSEQRWLEER---- 144
KYF +K W + ++ L + + ++ R
Sbjct: 61 LLACSLHDKYFVGASFLTATSQKSSSWGWKGILQGRRLLESGLHWRIGDDTTVQVRSGLA 120
Query: 145 ---VRKCFCHDDAELVLAIPLNSKQAGGEASEGNPVQPLWKELCTVIYV-----RRDAKV 204
V K H DA P K +W+ ++ V RR
Sbjct: 121 QSSVWKSVWHVDA------PPKLKAF------------IWRGCSNILAVRHNSHRRSVPC 180
Query: 205 CGEVEFVN-------HVLLECSPARAFWFGSHLQLDTMGFRGQSFLDSWNRITSQLAGVD 264
GE F H+ EC ARAFWF S LQLD G+ F+ +W + + L +
Sbjct: 181 TGECGFCGFQDETQAHIFFECDFARAFWFASPLQLDVSKLAGEDFISTWQHMMTTLNSSE 240
Query: 265 QAEENVSFLAFGLWRLWKAHNENTFVNKVLDVQLCIKLIEADVREFKQALVDERQPEVLQ 324
A E + + FGLWR+WKA N F D + L+ V EF+ A D QP+ LQ
Sbjct: 241 HAAEAIQWFVFGLWRIWKARNLAVFDGVQADPTEAVLLLLKQVSEFRTAKQD-LQPQPLQ 300
Query: 325 GDLAGPMLALDDEKPVLW---VDVAWNKDSFATGFGWVLWNS---VLKAFEEGEQRGGNS 342
+ L+ P L D AW+ G GWV+ +S +L A +G+ G ++
Sbjct: 301 PVSSPAPLSWCKPPPGLLKVNSDAAWSAQRMGGGVGWVIRDSFGLLLCAGGQGDLHGSSA 340
BLAST of Lag0017459 vs. ExPASy TrEMBL
Match:
A0A6J5WZ67 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS25303 PE=4 SV=1)
HSP 1 Score: 125.6 bits (314), Expect = 4.4e-25
Identity = 82/317 (25.87%), Postives = 141/317 (44.48%), Query Frame = 0
Query: 1 MALAVYTMNCFKLPVSICKEIDRKLATFWWQTENGKRGIHWGAWKALTDHKHKGRLNFKE 60
MA+ Y M+CF+LP+++CKEI+R++ +WW+ +GIHW W+ L+ K G + F++
Sbjct: 605 MAMPNYAMSCFQLPINLCKEIEREIIRYWWKGHKEHKGIHWVGWQRLSMLKEAGGMGFRD 664
Query: 61 IHNFNLALLVKQGGKWCIMG----------MAKYF---------GRKDCPQAWISLADWK 120
+ FNLA+L K G W I+ KYF G + W + +
Sbjct: 665 LRCFNLAMLAKIG--WRIIKHPDSLLATTYRDKYFRSSNFMSASGGRGTSWGWKGILQCR 724
Query: 121 ---------QFENKHLGRSMSEQR-WLEERVRKCFCHDDAELVLAIPLNSKQAGGE---- 180
+ N H G + + W + + +CF +A+ +L++PL+
Sbjct: 725 KILEAGMRWRIGNGHQGLIDDQTKMWNRDLILRCFNSAEAQTILSLPLSRWGCDDRLVWH 784
Query: 181 --ASEGNPVQPLWKELCTVIYVRRDAKVCGEVEFVNHVLLECSPA-------RAFWFGSH 240
G V+ ++ T +R+ ++ G+ E ECS ++ W
Sbjct: 785 FTTHGGYSVRTNYELALT---LRKSGELGGKAEG------ECSYGNDRKKCWKSIW---R 844
Query: 241 LQLDTMGFRGQSFLDSWNRITSQLAGVDQAEENVSFLAFGLWRLWKAHNENTFVNKVLDV 276
LQLD G+ F W+ + + ++E + + FGLWRLWK N F V+D
Sbjct: 845 LQLDASQLIGEEFSKCWDNLLQKYEKHQNSQEILQVVVFGLWRLWKTRNSAVFEGSVMDP 904
BLAST of Lag0017459 vs. TAIR 10
Match:
AT4G29090.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 84.0 bits (206), Expect = 2.8e-16
Identity = 37/72 (51.39%), Postives = 49/72 (68.06%), Query Frame = 0
Query: 1 MALAVYTMNCFKLPVSICKEIDRKLATFWWQTENGKRGIHWGAWKALTDHKHKGRLNFKE 60
MAL YTM CF LP ++CK+I LA FWW+ + +G+HW AW L+ +K +G + FK+
Sbjct: 1 MALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKD 60
Query: 61 IHNFNLALLVKQ 73
I FNLALL KQ
Sbjct: 61 IEAFNLALLGKQ 72
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J5UE59 | 1.5e-36 | 27.00 | Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=... | [more] |
A0A6J5WPU6 | 5.2e-34 | 25.96 | Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=... | [more] |
A0A6J5U034 | 9.5e-28 | 25.60 | Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=... | [more] |
A0A6J5VSP2 | 3.0e-26 | 27.98 | Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51717 PE=4 S... | [more] |
A0A6J5WZ67 | 4.4e-25 | 25.87 | Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=... | [more] |
Match Name | E-value | Identity | Description | |
AT4G29090.1 | 2.8e-16 | 51.39 | Ribonuclease H-like superfamily protein | [more] |