Lag0017376 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0017376
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	WAT1-related protein
Location	chr5: 2941665 .. 2944510 (+)
RNA-Seq Expression	Lag0017376
Synteny	Lag0017376

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCAAAGTTGCCTTACCTTGCTTCACTACTAGTACAACTTACTCTGGCTGGATTGAATCTTATGTCCAAAGTTGCTTTGGTTTCCGGCATGAGTAACTATGTCTTTATCTTCTATCGCCAAGCTCTTGGAACCATCATTTTGGCTCTCATGACAATATGTTTTAAACGGTAACTTACTTAAACTTTGTTTTGTTTGGTTTTTTGTTTTCAAATTTATAACTTACTTTTTTTTTTCATTTAGGTGTCGAAGGAATGAGAACATGCCGTTGTCTTTGATAAATCTATGCAAGATTTTTGGAATAGCACTCATAGGGTTCGTATTTGATTGATTTCAAATAATTATTTGTAATGTGGAAATTACATATCAATTGCTTCTTCTTTTTCCCTCGTAAATATATATCATTCTTAGGACGACTGTTTCGGAGACGTATGTTGTGGCTATTGATTACACATCAGCAATCTTTGGCGCTGCATCCGCTAACTGCATTCCCATTACAACTTTCTTGTTCGCAGTTTCGTTAAGGTATTCTTCTTTAATTCATTTAATTCACCACTAAGTTGACAAACGAGCAATTCTTGATTGCATATAGAAATCTTCCTATATACTCCATTAAAATCTTGATAACTAAAAAAAATTATAGAAAACGATTTTTTTTTTCTCTCTTCATTGTCAACATTTTAATAGTGGTACATATTTACCTTTTACTAGTAATTGATAGACAGTGCCTTTTGTTTTTAGATATTGTTTTTAGAAATTTAAAAGGTGAAGAGAGATGTTAAAACAAAAAGGAAAGAGACAATAATAGGAGAGGGGTGAAAACCAAATGTAATACAGTAAAAACCAAGAGACAGCACAGTGAATTAAATACATAAAAAAAATAATTTTGAATAAAATATAAATAATAGATTAACGACCGAGAGGTCTAATAGTTCAAATCCTCTATTTTTCACACGTTGCCAAAAAAAATAATTAACTACTAATAATATAATTTATAATTTTATAAATAAATAATTAATTTCATTTATATAAGTTATCTCATATATTTTTTTTCATATTTTATATTAACATACCATATTATTTTGTTATTTGCAAATCAGATGTATATTTTATAATTTTATTTATTAGGTTTATAATAAGTTATATTTTAGAGTTAAAAACTATTTATTAAAGTTATCATTAAAATAAAGGTTATTATATTGGAAGTTACAAAATTTTATTGTAGTTTGTTAAAAAAATCTAATGAACTTACCATTTAGAATTTAGAAAGAAAAAAAAATGTATGCATCTAAATAATTTGTATCTAATATTCTTACTTATATATGAGTTATGGCAAGAAAAAAGAAAAATTTTAGAGGGAGAATTGTTTTCAATATTAGAGAGAATTTGACGGTGAGAAATTAAGAAAATTAGATATAACTAAAAATAAATAAACAAAAATGGAGCTCATAATGTTGGTGGAAGATTTTTTTAAAAAAAAAATAGTAGTAAAAATGGTAGAGAAATCCTTTGAAATTTTGAACGTTAGAAATTCTATAATTCATTATTTTTAACTTTTTAGATTTCACATATTTGTTAGGGTTCTTTTAATAGTATATATTTATTATGATCAATAATCTTATTGATAACTATTCTAACCATTAACCATGTATATTTAAGTTAGAGATAGACTTTATGGAGGTAATGAGAGAGATTTTTAGGGAGGTGGTGAGATGAGAGTGAAAATTTTATTAGAATTATTTTAATGGTTTTGTGGTTATGGTTTCCTTTCTTTTCTTTCTTCTTTTTTATTATTTTTTTGAGGAAAAACAAATATTGGTTACAAATGACGATGAAATAAAATTATTTTTTTTTAGTAAACCACCAAGGAAATATAATAACACATGGTGAAGACACTCATCTTCCACATGAGTAGAAAAAGTAAAGTTAATGTTAGGAAAATGTTTCTTTTGAAAATAATTCATATTTATTTAAGTTTAAATATCACATTTGGCCAATTTTCATAATTAATCTGTTTATATTAAAATAATTAATTATATAAAAACAAAACATTTCAATAATGAGAGAAAATTTGCACTTATTAAAATTCATTCATTATTATTGTTGATGACATGCTTGTAAACTTAGAAATAAAAGTAGGAACAAAGTAGTTCAAAAATGTTTTCCAAACCTCATTCATTTTTAATAAAAAAATATATATATTTAGTGAAAAAACATTCTAACAAAATTTAGAATTACTTTATCAAAAATTAAATATGATTAGATAAAAATATTAAGTTTAAAATTACTTTATCTACATGCAAACTTTTTACATTATAACTTTTCACATTCTACTCATTTAATCTCTATGAGGTGCATTTAAATTGCATTATCTCATGCCACTTTTTTAATGAACTTTTTAGGTTACATTTTAATTGTTTATAATATATCAATTAAAAAATATTGTCGATGGTCAAATTTGGTCGGGAAGAACTTACCCGATCTTCACATGCCACCAACGTTAAATTTGTAGATGAGATGAAGATGTGGTCTGCAAAACGGTAAACCTGCACACGGGTGTGGTGCTAGTCACACTGTCTGTGATGTTTAAGTCAAAAAACTAGAGAGCAAGAGGAGAAGTTGAGAATAGAGTTTGGGATCCCATCTTCAGTGATGAAGATTGGTTCAAATACCTGCTCATGCTCCTAGGGTTTTTAGGAATTCGGAGGCGTTTCAAGCCGAACCAGGTAGAACCGGGGCGGCCAGAGGCAGCGGGGACTGAACTAAGGCGGACGGACTCGGGCCACGCAAGTGGGCCGAGTGGTCGACCTCAACCTCGGGTCGAGACTGACCATATGGGTTAG

mRNA sequence

ATGGAATCAAAGTTGCCTTACCTTGCTTCACTACTAGTACAACTTACTCTGGCTGGATTGAATCTTATGTCCAAAGTTGCTTTGGTTTCCGGCATGAGTAACTATGTCTTTATCTTCTATCGCCAAGCTCTTGGAACCATCATTTTGGCTCTCATGACAATATGTTTTAAACGGAATGAGAACATGCCGTTGTCTTTGATAAATCTATGCAAGATTTTTGGAATAGCACTCATAGGGACGACTGTTTCGGAGACGTATGTTGTGGCTATTGATTACACATCAGCAATCTTTGGCGCTGCATCCGCTAACTGCATTCCCATTACAACTTTCTTGTTCGCAGTTTCGTTAAGTGATGAAGATTGGTTCAAATACCTGCTCATGCTCCTAGGGTTTTTAGGAATTCGGAGGCGTTTCAAGCCGAACCAGGTAGAACCGGGGCGGCCAGAGGCAGCGGGGACTGAACTAAGGCGGACGGACTCGGGCCACGCAAGTGGGCCGAGTGGTCGACCTCAACCTCGGGTCGAGACTGACCATATGGGTTAG

Coding sequence (CDS)

ATGGAATCAAAGTTGCCTTACCTTGCTTCACTACTAGTACAACTTACTCTGGCTGGATTGAATCTTATGTCCAAAGTTGCTTTGGTTTCCGGCATGAGTAACTATGTCTTTATCTTCTATCGCCAAGCTCTTGGAACCATCATTTTGGCTCTCATGACAATATGTTTTAAACGGAATGAGAACATGCCGTTGTCTTTGATAAATCTATGCAAGATTTTTGGAATAGCACTCATAGGGACGACTGTTTCGGAGACGTATGTTGTGGCTATTGATTACACATCAGCAATCTTTGGCGCTGCATCCGCTAACTGCATTCCCATTACAACTTTCTTGTTCGCAGTTTCGTTAAGTGATGAAGATTGGTTCAAATACCTGCTCATGCTCCTAGGGTTTTTAGGAATTCGGAGGCGTTTCAAGCCGAACCAGGTAGAACCGGGGCGGCCAGAGGCAGCGGGGACTGAACTAAGGCGGACGGACTCGGGCCACGCAAGTGGGCCGAGTGGTCGACCTCAACCTCGGGTCGAGACTGACCATATGGGTTAG

Protein sequence

MESKLPYLASLLVQLTLAGLNLMSKVALVSGMSNYVFIFYRQALGTIILALMTICFKRNENMPLSLINLCKIFGIALIGTTVSETYVVAIDYTSAIFGAASANCIPITTFLFAVSLSDEDWFKYLLMLLGFLGIRRRFKPNQVEPGRPEAAGTELRRTDSGHASGPSGRPQPRVETDHMG

Homology

[Close]

BLAST of Lag0017376 vs. NCBI nr
Match: XP_022133040.1 (WAT1-related protein At5g64700-like [Momordica charantia])

HSP 1 Score: 126.7 bits (317), Expect = 2.0e-25
Identity = 67/120 (55.83%), Postives = 89/120 (74.17%), Query Frame = 0


Query: 1   MESKLPYLASLLVQLTLAGLNLMSKVALVSGMSNYVFIFYRQALGTIILALMTICFKRNE 60
           M SK PY+A+  +Q+T AG++LMSK A  +GMS YVF+FYRQA GT++L  +T+  K  E
Sbjct: 9   MGSKKPYIAAFFIQITFAGMSLMSKAAFATGMSTYVFLFYRQAAGTLVLVPLTMILKGKE 68

Query: 61  NMPLSLINLCKIFGIALIGTTVS-ETYVVAIDYTSAIFGAASANCIPITTFLFAVSLSDE 120
             PLSL NLC+IF I+LIG T++ + Y VAI+YTSA  GAA+ NC+P+TTF FA+ L  E
Sbjct: 69  KRPLSLKNLCQIFVISLIGITLALDAYGVAINYTSATLGAAAFNCVPVTTFFFAILLRME 128

[Close]

BLAST of Lag0017376 vs. NCBI nr
Match: XP_022132856.1 (WAT1-related protein At5g64700-like [Momordica charantia])

HSP 1 Score: 120.6 bits (301), Expect = 1.4e-23
Identity = 66/120 (55.00%), Postives = 88/120 (73.33%), Query Frame = 0


Query: 1   MESKLPYLASLLVQLTLAGLNLMSKVALVSGMSNYVFIFYRQALGTIILALMTICFKRNE 60
           M+SK P +A+++VQ+T AG++++SK A  SGM+NY+FIFYRQA G + L   TI FKR E
Sbjct: 1   MDSKKPLIAAIIVQITYAGMSMLSKAAFASGMNNYIFIFYRQAFGILFLLPPTIFFKRKE 60

Query: 61  NMPLSLINLCKIFGIALIG-TTVSETYVVAIDYTSAIFGAASANCIPITTFLFAVSLSDE 120
              LSL  +CKIF +ALIG T V   Y + ++YT+AI GAA+ NC+P+TTFLFAV L  E
Sbjct: 61  VARLSLGEICKIFMLALIGRTLVLIAYALGVNYTTAILGAAAFNCLPVTTFLFAVLLRME 120

[Close]

BLAST of Lag0017376 vs. NCBI nr
Match: XP_022949631.1 (WAT1-related protein At5g64700-like [Cucurbita moschata])

HSP 1 Score: 120.2 bits (300), Expect = 1.9e-23
Identity = 63/120 (52.50%), Postives = 87/120 (72.50%), Query Frame = 0


Query: 1   MESKLPYLASLLVQLTLAGLNLMSKVALVSGMSNYVFIFYRQALGTIILALMTICFKRNE 60
           M S  PY+ +  +Q+T AG++LMSK A  SGM+ Y+F+FYRQA GT++L  +T+  K  E
Sbjct: 1   MASNNPYIVAFFIQITYAGMSLMSKAAFASGMNTYIFLFYRQAAGTLVLVPLTLLLKGKE 60

Query: 61  NMPLSLINLCKIFGIALIGTTVS-ETYVVAIDYTSAIFGAASANCIPITTFLFAVSLSDE 120
             PLSL +LC+IF I+LIG T++ + Y VAI+YTSA  GAA+ NC+P+TTF FA+ L  E
Sbjct: 61  KRPLSLKHLCQIFVISLIGITLALDAYGVAINYTSATLGAAAFNCVPVTTFFFALILRME 120

[Close]

BLAST of Lag0017376 vs. NCBI nr
Match: XP_022979012.1 (WAT1-related protein At5g64700-like [Cucurbita maxima])

HSP 1 Score: 120.2 bits (300), Expect = 1.9e-23
Identity = 63/120 (52.50%), Postives = 87/120 (72.50%), Query Frame = 0


Query: 1   MESKLPYLASLLVQLTLAGLNLMSKVALVSGMSNYVFIFYRQALGTIILALMTICFKRNE 60
           M S  PY+ +  +Q+T AG++LMSK A  SGM+ Y+F+FYRQA GT++L  +T+  K  E
Sbjct: 1   MASNNPYIVAFFIQITYAGMSLMSKAAFASGMNTYIFLFYRQAAGTLVLVPLTLLLKGKE 60

Query: 61  NMPLSLINLCKIFGIALIGTTVS-ETYVVAIDYTSAIFGAASANCIPITTFLFAVSLSDE 120
             PLSL +LC+IF I+LIG T++ + Y VAI+YTSA  GAA+ NC+P+TTF FA+ L  E
Sbjct: 61  KRPLSLKHLCQIFVISLIGITLALDAYGVAINYTSATLGAAAFNCVPVTTFFFALILRME 120

[Close]

BLAST of Lag0017376 vs. NCBI nr
Match: KAG6604267.1 (WAT1-related protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 120.2 bits (300), Expect = 1.9e-23
Identity = 63/120 (52.50%), Postives = 87/120 (72.50%), Query Frame = 0


Query: 1   MESKLPYLASLLVQLTLAGLNLMSKVALVSGMSNYVFIFYRQALGTIILALMTICFKRNE 60
           M S  PY+ +  +Q+T AG++LMSK A  SGM+ Y+F+FYRQA GT++L  +T+  K  E
Sbjct: 1   MASNNPYIVAFFIQITYAGMSLMSKAAFASGMNTYIFLFYRQAAGTLVLVPLTLLLKGKE 60

Query: 61  NMPLSLINLCKIFGIALIGTTVS-ETYVVAIDYTSAIFGAASANCIPITTFLFAVSLSDE 120
             PLSL +LC+IF I+LIG T++ + Y VAI+YTSA  GAA+ NC+P+TTF FA+ L  E
Sbjct: 61  KRPLSLKHLCQIFVISLIGITLALDAYGVAINYTSATLGAAAFNCVPVTTFFFALILRME 120

[Close]

BLAST of Lag0017376 vs. ExPASy Swiss-Prot
Match: Q9FGG3 (WAT1-related protein At5g64700 OS=Arabidopsis thaliana OX=3702 GN=At5g64700 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.1e-13
Identity = 47/115 (40.87%), Postives = 67/115 (58.26%), Query Frame = 0


Query: 1   MESKLPYLASLLVQLTLAGLNLMSKVALVSGMSNYVFIFYRQALGTIILALMTICFKRNE 60
           MESK PYL   ++Q+    + L+SK     GM+ +VF+FYRQA  TI LA +   F+R  
Sbjct: 3   MESKKPYLMVTIIQVIYTIMFLISKAVFNGGMNTFVFVFYRQAFATIFLAPLAFFFERKS 62

Query: 61  NMPLSLINLCKIFGIALIGTTVS-ETYVVAIDYTSAIFGAASANCIPITTFLFAV 115
             PLS +   KIF ++L G T+S +   +A+ YTSA   AA+   +P  TF  A+
Sbjct: 63  APPLSFVTFIKIFMLSLFGVTLSLDLNGIALSYTSATLAAATTASLPAITFFLAL 117

[Close]

BLAST of Lag0017376 vs. ExPASy Swiss-Prot
Match: Q6NMB7 (WAT1-related protein At1g43650 OS=Arabidopsis thaliana OX=3702 GN=At1g43650 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.4e-13
Identity = 47/108 (43.52%), Postives = 69/108 (63.89%), Query Frame = 0


Query: 8   LASLLVQLTLAGLNLMSKVALVSGMSNYVFIFYRQALGTIILALMTICFKRNENMPLSLI 67
           +A + VQ+  AG+ L+SKVA+  G + +VF+FYRQA   + L+      + +++ PLS I
Sbjct: 9   MAMVFVQIVYAGMPLLSKVAISQGTNPFVFVFYRQAFAALALSPFAFFLESSKSSPLSFI 68

Query: 68  NLCKIFGIALIGTTVS-ETYVVAIDYTSAIFGAASANCIPITTFLFAV 115
            L KIF I+L G T+S   Y VAI+ T+A F AA+ N IP  TF+ A+
Sbjct: 69  LLLKIFFISLCGLTLSLNLYYVAIENTTATFAAATTNAIPSITFVLAL 116

[Close]

BLAST of Lag0017376 vs. ExPASy Swiss-Prot
Match: Q9FL41 (WAT1-related protein At5g07050 OS=Arabidopsis thaliana OX=3702 GN=At5g07050 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.5e-11
Identity = 37/115 (32.17%), Postives = 66/115 (57.39%), Query Frame = 0


Query: 1   MESKLPYLASLLVQLTLAGLNLMSKVALVSGMSNYVFIFYRQALGTIILALMTICFKRNE 60
           + S  PY A + +Q   AG+N+++K++L +GMS+YV + YR A+ T ++A     F+R  
Sbjct: 13  LTSSKPYFAMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERKA 72

Query: 61  NMPLSLINLCKIFGIALIGTTVSET-YVVAIDYTSAIFGAASANCIPITTFLFAV 115
              ++     ++F + L+G  + +  Y + + YTS  F  A +N +P  TF+ AV
Sbjct: 73  QPKITFSIFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAV 127

[Close]

BLAST of Lag0017376 vs. ExPASy Swiss-Prot
Match: Q9ZUS1 (WAT1-related protein At2g37460 OS=Arabidopsis thaliana OX=3702 GN=At2g37460 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.2e-10
Identity = 38/114 (33.33%), Postives = 66/114 (57.89%), Query Frame = 0


Query: 1   MESKLPYLASLLVQLTLAGLNLMSKVALVSGMSNYVFIFYRQALGTIILALMTICFKRNE 60
           ME   P+++ +++Q+ LAG++++SK  L  GMSNYV + YR A+ TI++A     F +  
Sbjct: 10  MEKARPFISMVVLQVGLAGMDILSKAVLNKGMSNYVLVVYRHAVATIVMAPFAFYFDKKV 69

Query: 61  NMPLSLINLCKIFGIALIGTTVSET-YVVAIDYTSAIFGAASANCIPITTFLFA 114
              ++L+   KI  + L+   + +  Y + + YT+A F  A  N +P  TF+ A
Sbjct: 70  RPKMTLMIFFKISLLGLLEPVIDQNLYYLGMKYTTATFATAMYNVLPAITFVLA 123

[Close]

BLAST of Lag0017376 vs. ExPASy Swiss-Prot
Match: Q9LXX8 (WAT1-related protein At3g56620 OS=Arabidopsis thaliana OX=3702 GN=At3g56620 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 7.9e-09
Identity = 38/114 (33.33%), Postives = 60/114 (52.63%), Query Frame = 0


Query: 2   ESKLPYLASLLVQLTLAGLNLMSKVALVSGMSNYVFIFYRQALGTIILALMTICFKRNEN 61
           ES  PY A + +Q   AG+NL++KV L  GMS+YV + YR A  T  +A   +  +R   
Sbjct: 7   ESAKPYFAMVCLQFGYAGMNLVTKVVLDRGMSHYVLVAYRNAFATAAIAPFALLSERKVR 66

Query: 62  MPLSLINLCKIFGIALIGTTVSET-YVVAIDYTSAIFGAASANCIPITTFLFAV 115
             ++     +IF +AL+G  + +  Y   +  TS  F  A  N +P  TF+ ++
Sbjct: 67  PKMTFPIFMQIFVLALLGPLIDQNLYYAGLKLTSPTFAGAVTNIVPALTFIISI 120

The following BLAST results are available for this feature:

BLAST of Lag0017376 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133040.1	2.0e-25	55.83	WAT1-related protein At5g64700-like [Momordica charantia]	[more]
XP_022132856.1	1.4e-23	55.00	WAT1-related protein At5g64700-like [Momordica charantia]	[more]
XP_022949631.1	1.9e-23	52.50	WAT1-related protein At5g64700-like [Cucurbita moschata]	[more]
XP_022979012.1	1.9e-23	52.50	WAT1-related protein At5g64700-like [Cucurbita maxima]	[more]
KAG6604267.1	1.9e-23	52.50	WAT1-related protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lag0017376 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGG3	1.1e-13	40.87	WAT1-related protein At5g64700 OS=Arabidopsis thaliana OX=3702 GN=At5g64700 PE=2...	[more]
Q6NMB7	2.4e-13	43.52	WAT1-related protein At1g43650 OS=Arabidopsis thaliana OX=3702 GN=At1g43650 PE=2...	[more]
Q9FL41	6.5e-11	32.17	WAT1-related protein At5g07050 OS=Arabidopsis thaliana OX=3702 GN=At5g07050 PE=2...	[more]
Q9ZUS1	3.2e-10	33.33	WAT1-related protein At2g37460 OS=Arabidopsis thaliana OX=3702 GN=At2g37460 PE=2...	[more]
Q9LXX8	7.9e-09	33.33	WAT1-related protein At3g56620 OS=Arabidopsis thaliana OX=3702 GN=At3g56620 PE=2...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..180
None	No IPR available	PANTHER	PTHR31218:SF166	WAT1-RELATED PROTEIN	coord: 5..119
IPR030184	WAT1-related protein	PANTHER	PTHR31218	WAT1-RELATED PROTEIN	coord: 5..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0017376.1	Lag0017376.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0022857	transmembrane transporter activity