Lag0017349 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0017349
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr5: 2576244 .. 2579339 (-)
RNA-Seq ExpressionLag0017349
SyntenyLag0017349
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCTCACGCAGCTTTGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTCCGTTGCAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCGCTGCAGTTCCTTCTCCCAAATTTGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTACGAAGGTTCTCCACTACTGCAGTTCATTCTTCAAAGTTCGAAGGTTCTCAAGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTGCTTCGCTGCAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCGCTGCAATTCCTTCTCCCAAATTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCAAAATTCGAAGGTTCTCACGTGTTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCTCACAATTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCCAAGTTTGAAGGGTCTCACGCGCTTCGTGCAGTTCCTTCCTCAAAATTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCCCCAAATTTGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGCACTTCGCTGCAGTTCCTTCCTCACAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCACTCCAAGTTTGAAGGTTCTCACATTGCTTTGCTGCGATCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCCAAGTTTGAAGGGTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGCACTTCGCTGCAGTTCCTTCCTCCAAGTTCAAAGGTTCTCACGCGCTTCGCTGCACTCCAGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCTCATGCTACGCTCGGCTACATTGCTGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCCTGCACTCATGCTGAAAAGGGCATGGCGGCGACACAAGTCCAAGGACATGTCCCAAAGCCAGGAACATGTCCCTGTACTCATGCTGAAAAGGGCGTGGCGGCGACATAAGTCCAAGGAACATGTCCTTGCACTCGTGTTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGAAAGGCGTGGCGGCGGCACAAGTCCAAGAAACATGTCCCAACTCAAGGAACACGTCCTTGCAACTCGTGCTGAAAGGCGTGGCAGTGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGTCTCAACTCAAGGAACATGTCCGTGCACTCGTGCTGAAAGGCGCGACGGCGACACAAGTCTAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGAAAGGCGTGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTACATCTCGTGCTGAAAGGCGTGGCGGCGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCAACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGAAAGGCGTGACGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCTTGCACTCGTGATGAAAGGCGTGGCGACGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGAAAGGCGGGACGGCGACACAAGTCTAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGAAAGGCGTGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTACAACTCGTGCTGAAAGGCGTGGCGGCGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCAACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGAAAGGCGTGACGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCTTGCACTCGTGCTGAAAGGCGTGGCGACGACACAAGTCTAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGAAAGGCGTGACGGCGATACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCTTACACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTTCGTGCACTCGTGCTAAAAGGCGTGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGACCGTGCACTCGTGCTGAAAGGCGTGGCGGCGACATAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGGAAGGCGCGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCACTCGTGCTGAAAGGTGTGGCGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACAAGTCCTTGCACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCACTCGTGCTGAAATTCGTGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCACTCATGGTGA

mRNA sequence

ATGGTTCTCACGCAGCTTTGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTCCGTTGCAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCGCTGCAGTTCCTTCTCCCAAATTTGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTACGAAGGTTCTCCACTACTGCAGTTCATTCTTCAAAGTTCGAAGGTTCTCAAGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTGCTTCGCTGCAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCGCTGCAATTCCTTCTCCCAAATTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCAAAATTCGAAGGTTCTCACGTGTTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCTCACAATTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCCAAGTTTGAAGGGTCTCACGCGCTTCGTGCAGTTCCTTCCTCAAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGCACTTCGCTGCAGTTCCTTCCTCACAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCACTCCAAGTTTGAAGGTTCTCACATTGCTTTGCTGCGATCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCCAAGTTTGAAGGGTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGCACTTCGCTGCAGTTCCTTCCTCCAAGTTCAAAGGTTCTCACGCGCTTCGCTGCACTCCAGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCTCATGCTACGCTCGGCTACATTGCTGCGCTACTTCCTAAAGCGTGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGAAAGGCGTGGCGGCGGCACAAGTCCAAGAAACATGTCCCAACTCAAGGAACACGTCCTTGCAACTCGTGCTGAAAGGCGTGGCAGTGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGTCTCAACTCAAGGAACATGCGTGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTACATCTCGTGCTGAAAGGCGTGGCGGCGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCAACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGCGTGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTACAACTCGTGCTGAAAGGCGTGGCGGCGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCAACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCGCGTGGCGACGACACAAGTCTAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGAAAGGCGTGACGGCGATACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCTTACACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTTCGCGTGGCGGCGACATAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGGAAGGCGCGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCACTCGTGCTGAAAGGTGTGGCGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACAAGTCCTTGCACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCACTCGTGCTGAAATTCGTGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCACTCATGGTGA

Coding sequence (CDS)

ATGGTTCTCACGCAGCTTTGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTCCGTTGCAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCGCTGCAGTTCCTTCTCCCAAATTTGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTACGAAGGTTCTCCACTACTGCAGTTCATTCTTCAAAGTTCGAAGGTTCTCAAGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTGCTTCGCTGCAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCGCTGCAATTCCTTCTCCCAAATTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCAAAATTCGAAGGTTCTCACGTGTTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCTCACAATTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCCAAGTTTGAAGGGTCTCACGCGCTTCGTGCAGTTCCTTCCTCAAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGCACTTCGCTGCAGTTCCTTCCTCACAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCACTCCAAGTTTGAAGGTTCTCACATTGCTTTGCTGCGATCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCCAAGTTTGAAGGGTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGCACTTCGCTGCAGTTCCTTCCTCCAAGTTCAAAGGTTCTCACGCGCTTCGCTGCACTCCAGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCTCATGCTACGCTCGGCTACATTGCTGCGCTACTTCCTAAAGCGTGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGAAAGGCGTGGCGGCGGCACAAGTCCAAGAAACATGTCCCAACTCAAGGAACACGTCCTTGCAACTCGTGCTGAAAGGCGTGGCAGTGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGTCTCAACTCAAGGAACATGCGTGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTACATCTCGTGCTGAAAGGCGTGGCGGCGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCAACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGCGTGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTACAACTCGTGCTGAAAGGCGTGGCGGCGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCAACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCGCGTGGCGACGACACAAGTCTAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGAAAGGCGTGACGGCGATACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCTTACACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTTCGCGTGGCGGCGACATAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGGAAGGCGCGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCACTCGTGCTGAAAGGTGTGGCGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACAAGTCCTTGCACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCACTCGTGCTGAAATTCGTGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCACTCATGGTGA

Protein sequence

MVLTQLCWSFFSPSSKVLTRSVAVPSLQGRRFSRAALQFFLPKFEGSRTSLQFLLPNLKVLTRFAAVPSSKYEGSPLLQFILQSSKVLKSLRCSSFLQVRRFSRASLQFLLSKVEGSHALRCSSFSPSSKVHALRCNSFSQIRRFSRASLCNSFPQVRRFSRASCSSFLKIRRFSRVSLQFLPPSLKVLTRFVAVPSSQFEGSHALRSAIPSPKFEGSHALRAVPSSKFEGSHALRCSSFPPSSKVLTHFAAVPSSQFEGSHALRCSSFTPSLKVLTLLCCDPSSKFEGSHALRSAIPSPKFEGSHALRAVPSSKFEGSHALRCSSFPPNSKVLTRFAAVPSPQVRRFSRTSLQFLPPSSKVLTRFAALQRYFLKSKDVNCPHATLGYIAALLPKAWRRHKSKEHVPTQGTCPCTRAERRGGGTSPRNMSQLKEHVLATRAERRGSDTSPRNMSQLKEHVRALVLKGVAATQVQGTCLNSRNMRGGGTSPRNMSQLKEHVLTSRAERRGGAQVQGTCPNSRNTSLQLVLKGVAATQVQGTCPNSRNMRGGGTSPRNMSQLKEHVLTTRAERRGGAQVQGTCPNSRNTSLQLVLKGVAATQVQGTCPNSRNMSAWRRHKSKEHVPTQGTCPCTRAERRDGDTSPRNMSQLKEHVLTLVLKGVAATQVQGTCPNSRNMFAWRRHKSKEHVPTQGTCPCTRAGRRGGGTSPRNMSQLKEHVLALVLKGVARHKSKEHVPTQGTSPCTRAERRGGDTSPRNMSQLKEHVLALVLKFVAATQVQGTCPNSRNTSLHSW
Homology
[Close]
BLAST of Lag0017349 vs. NCBI nr
Match: KAG9328199.1 (hypothetical protein JZ751_015864, partial [Albula glossodonta])

HSP 1 Score: 64.3 bits (155), Expect = 5.4e-06
Identity = 78/261 (29.89%), Postives = 117/261 (44.83%), Query Frame = 0 

Query: 194  AVPSSQ-FEGSHALRSAIPS-PKFEGSHALR-AVPS-SKFEGSHALRCS--SFPPSSKVL 253
            A+PS+  F G+HA RSA+PS P F  +H+ R A+PS   F  +H+ R +  S P      
Sbjct: 906  ALPSAPLFPGTHAYRSALPSAPLFPSTHSYRSALPSVPLFPSTHSYRSALPSVPLFPGTH 965

Query: 254  THFAAVPSSQ-FEGSHALRCSSFTPSLKVLTLLCCDPSSKFEGSHALRSAIPS-PKFEGS 313
            ++ +A+PS+  F G+H+ R  S  PS+ +           F G+H+ RSA+PS P F G+
Sbjct: 966  SYRSALPSAPLFPGTHSYR--SALPSVPL-----------FPGTHSYRSALPSAPLFPGT 1025

Query: 314  HALR-AVPSSK-FEGSHALRCS----------SFPPNSKVLTRFAAVPSPQVRRFSRTSL 373
            H+ R A+PS+  F  +H+ R +          S  P+S       A+PS Q      T L
Sbjct: 1026 HSYRSALPSAPLFPSTHSYRSALPSHTPTALPSLQPHSSQAHTPTALPSLQPHSSQHTLL 1085

Query: 374  QFLPPSSKVLTRFAALQRYFLKSKDVNCP--------HATLGYIAALLPKAWRRHKSKEH 427
               PP S  L +   L           CP        H  L      +P     H  +  
Sbjct: 1086 PLCPPFSPTLPKHTLLPL---------CPPFSPTLPKHTLLPLCPPFIPLFPSTHSYRSA 1144

The following BLAST results are available for this feature:
BLAST of Lag0017349 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG9328199.15.4e-0629.89hypothetical protein JZ751_015864, partial [Albula glossodonta][more]
BLAST of Lag0017349 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0017349 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0017349 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 682..710
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 729..756
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 609..645
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 404..432

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0017349.1Lag0017349.1mRNA