Lag0017348 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATATAATCAACAAACTTTCAGAGCTCAAGCTTTCACAGAAAGAATCTAGCGGAATAAACACTTCGGAGTTGGGCTTACACGAAAATCAGGCTAAGCTCCAAAATTGTCTGGTAGGAAAGGTTGTTTCTCAACGAACTATCAACATTGACGCGTTCAGGAAAACTATGACAAAAGTATGGTATTTTTGTCGTGGGATAACCATCGATAATATTGGGGAAAATCTCTTTCTTATCAATCCACAATCCGTTCTAGGAAGGGACAGAATTGTGGAGGAGAGCCCATGGTGTTTCGACGGTAATTTGATTCTACTCAAAACCCCAACAACGTTCGATCAGCCAGAAGATATGATTTTCGATGATCCACAGTTCTGGGTTCAAATTCACCATTTACCTCTTGGATTACGAAATGGCAAAGTGGCACAAACGCTTGGGAACATAATAGGGATAGTACAAAGAGTAGATACAAATGAAGTGGATGAATGTTGGGGTCCTTTTCTCCGAGTACGGGTCAAGATGAAGATCAACGAGCCTTTATGTCGGGGGTTAACTCTAAATGACGGACCATCTGGAAAAATCTTGGCAGCGATTAAGTACGAGAGATTGCCTGATTTTTGTTATTACTGTGGAATGATCGATCACAATGATGGCTCATGCCCACTTCTAAAAACCCAGGCGAAACCAGAAAAACAATTCGGATCATGGATGCGAGCGGCTAGTCCTCCAAGAAAATACCATTCTAACGCAAGCGGCCGAGGATTTGAAGGAACCCGAGGAGGAAGAGGTCGATTTGGAAACCGACAAGGGGGAAAGCATTCGTGGCGATCTGAATCAATGGAGGAGGGGGAACACGATAACGATGAAGAACCGATTACAACTAATTCTCAACTCTCGAACGACGGCAATGGCGAACAACAGACAGGAACTGACCGCCGGACGTTTTCTGCGATCGCCTCCGACGATCCTCCACCGCAATCAAAGCTCCCAGCGGCAAAGACGGGTATTAAATGTTCGATTTCCTTAGATAACGCTAATATTATGGATCCGTTCCCTATAATTGCAGATGCCGATAATTTAGGAAAGGAGGGAGATGGGTTTAATGGCTGCAACGGCCAGAAATCCCTAAAAATCAGCAACATAACTAATGGAGAAGGGAAAGGAAACGACGCTGATGAAAGCTTAGGGCATATGGAAACTAATGGGCTTGAAAATTATGATGGGCCCATTCCTTCTGGCAAAATTATTACAACCCAAATCAACATAAAACCAAATCAAATAATGGTGTATCAGCAACCCAATACGGAAGGGGTTGAAACCAATCACAACCCACTTGAAGGTAACAATATTGTAAGCCCAGGCCTTTTCCATGAAGCAACTATGATGGAAGCAGATCATTACTATGTCAAGCCCAAATCGACGGTGCAGGTCAAAGAGAATCAGAAGAATAAACAGCCCATATCTGCAGACTCTGAAAGTGGAAAAAAGGATCGTTGGGAGCAGGGAAATATTTCTCTTGATAAGCTAAGGCTGTTAAAAGGCTGGAAGAGGATTAACAGACAGGGAGATCACACTAAGGTCGATCAATCCACAGAACTCATGCAATTTGCTTCAAGGAAGAGGGTTGCAGAAAATGATAAATTGGAAGGTAGCTCAGACAAGAAACTCAAATCACTAGTTCCACAAAAGGATGGAATTATATCGGCGGAGCCTGATCAGCAGGCCCGCCGAGAGCCATGA ATGGATATAATCAACAAACTTTCAGAGCTCAAGCTTTCACAGAAAGAATCTAGCGGAATAAACACTTCGGAGTTGGGCTTACACGAAAATCAGGCTAAGCTCCAAAATTGTCTGGTAGGAAAGGTTGTTTCTCAACGAACTATCAACATTGACGCGTTCAGGAAAACTATGACAAAAGTATGGTATTTTTGTCGTGGGATAACCATCGATAATATTGGGGAAAATCTCTTTCTTATCAATCCACAATCCGTTCTAGGAAGGGACAGAATTGTGGAGGAGAGCCCATGGTGTTTCGACGGTAATTTGATTCTACTCAAAACCCCAACAACGTTCGATCAGCCAGAAGATATGATTTTCGATGATCCACAGTTCTGGGTTCAAATTCACCATTTACCTCTTGGATTACGAAATGGCAAAGTGGCACAAACGCTTGGGAACATAATAGGGATAGTACAAAGAGTAGATACAAATGAAGTGGATGAATGTTGGGGTCCTTTTCTCCGAGTACGGGTCAAGATGAAGATCAACGAGCCTTTATGTCGGGGGTTAACTCTAAATGACGGACCATCTGGAAAAATCTTGGCAGCGATTAAGTACGAGAGATTGCCTGATTTTTGTTATTACTGTGGAATGATCGATCACAATGATGGCTCATGCCCACTTCTAAAAACCCAGGCGAAACCAGAAAAACAATTCGGATCATGGATGCGAGCGGCTAGTCCTCCAAGAAAATACCATTCTAACGCAAGCGGCCGAGGATTTGAAGGAACCCGAGGAGGAAGAGGTCGATTTGGAAACCGACAAGGGGGAAAGCATTCGTGGCGATCTGAATCAATGGAGGAGGGGGAACACGATAACGATGAAGAACCGATTACAACTAATTCTCAACTCTCGAACGACGGCAATGGCGAACAACAGACAGGAACTGACCGCCGGACGTTTTCTGCGATCGCCTCCGACGATCCTCCACCGCAATCAAAGCTCCCAGCGGCAAAGACGGGTATTAAATGTTCGATTTCCTTAGATAACGCTAATATTATGGATCCGTTCCCTATAATTGCAGATGCCGATAATTTAGGAAAGGAGGGAGATGGGTTTAATGGCTGCAACGGCCAGAAATCCCTAAAAATCAGCAACATAACTAATGGAGAAGGGAAAGGAAACGACGCTGATGAAAGCTTAGGGCATATGGAAACTAATGGGCTTGAAAATTATGATGGGCCCATTCCTTCTGGCAAAATTATTACAACCCAAATCAACATAAAACCAAATCAAATAATGGTGTATCAGCAACCCAATACGGAAGGGGTTGAAACCAATCACAACCCACTTGAAGGTAACAATATTGTAAGCCCAGGCCTTTTCCATGAAGCAACTATGATGGAAGCAGATCATTACTATGTCAAGCCCAAATCGACGGTGCAGGTCAAAGAGAATCAGAAGAATAAACAGCCCATATCTGCAGACTCTGAAAGTGGAAAAAAGGATCGTTGGGAGCAGGGAAATATTTCTCTTGATAAGCTAAGGCTGTTAAAAGGCTGGAAGAGGATTAACAGACAGGGAGATCACACTAAGGTCGATCAATCCACAGAACTCATGCAATTTGCTTCAAGGAAGAGGGTTGCAGAAAATGATAAATTGGAAGGTAGCTCAGACAAGAAACTCAAATCACTAGTTCCACAAAAGGATGGAATTATATCGGCGGAGCCTGATCAGCAGGCCCGCCGAGAGCCATGA ATGGATATAATCAACAAACTTTCAGAGCTCAAGCTTTCACAGAAAGAATCTAGCGGAATAAACACTTCGGAGTTGGGCTTACACGAAAATCAGGCTAAGCTCCAAAATTGTCTGGTAGGAAAGGTTGTTTCTCAACGAACTATCAACATTGACGCGTTCAGGAAAACTATGACAAAAGTATGGTATTTTTGTCGTGGGATAACCATCGATAATATTGGGGAAAATCTCTTTCTTATCAATCCACAATCCGTTCTAGGAAGGGACAGAATTGTGGAGGAGAGCCCATGGTGTTTCGACGGTAATTTGATTCTACTCAAAACCCCAACAACGTTCGATCAGCCAGAAGATATGATTTTCGATGATCCACAGTTCTGGGTTCAAATTCACCATTTACCTCTTGGATTACGAAATGGCAAAGTGGCACAAACGCTTGGGAACATAATAGGGATAGTACAAAGAGTAGATACAAATGAAGTGGATGAATGTTGGGGTCCTTTTCTCCGAGTACGGGTCAAGATGAAGATCAACGAGCCTTTATGTCGGGGGTTAACTCTAAATGACGGACCATCTGGAAAAATCTTGGCAGCGATTAAGTACGAGAGATTGCCTGATTTTTGTTATTACTGTGGAATGATCGATCACAATGATGGCTCATGCCCACTTCTAAAAACCCAGGCGAAACCAGAAAAACAATTCGGATCATGGATGCGAGCGGCTAGTCCTCCAAGAAAATACCATTCTAACGCAAGCGGCCGAGGATTTGAAGGAACCCGAGGAGGAAGAGGTCGATTTGGAAACCGACAAGGGGGAAAGCATTCGTGGCGATCTGAATCAATGGAGGAGGGGGAACACGATAACGATGAAGAACCGATTACAACTAATTCTCAACTCTCGAACGACGGCAATGGCGAACAACAGACAGGAACTGACCGCCGGACGTTTTCTGCGATCGCCTCCGACGATCCTCCACCGCAATCAAAGCTCCCAGCGGCAAAGACGGGTATTAAATGTTCGATTTCCTTAGATAACGCTAATATTATGGATCCGTTCCCTATAATTGCAGATGCCGATAATTTAGGAAAGGAGGGAGATGGGTTTAATGGCTGCAACGGCCAGAAATCCCTAAAAATCAGCAACATAACTAATGGAGAAGGGAAAGGAAACGACGCTGATGAAAGCTTAGGGCATATGGAAACTAATGGGCTTGAAAATTATGATGGGCCCATTCCTTCTGGCAAAATTATTACAACCCAAATCAACATAAAACCAAATCAAATAATGGTGTATCAGCAACCCAATACGGAAGGGGTTGAAACCAATCACAACCCACTTGAAGGTAACAATATTGTAAGCCCAGGCCTTTTCCATGAAGCAACTATGATGGAAGCAGATCATTACTATGTCAAGCCCAAATCGACGGTGCAGGTCAAAGAGAATCAGAAGAATAAACAGCCCATATCTGCAGACTCTGAAAGTGGAAAAAAGGATCGTTGGGAGCAGGGAAATATTTCTCTTGATAAGCTAAGGCTGTTAAAAGGCTGGAAGAGGATTAACAGACAGGGAGATCACACTAAGGTCGATCAATCCACAGAACTCATGCAATTTGCTTCAAGGAAGAGGGTTGCAGAAAATGATAAATTGGAAGGTAGCTCAGACAAGAAACTCAAATCACTAGTTCCACAAAAGGATGGAATTATATCGGCGGAGCCTGATCAGCAGGCCCGCCGAGAGCCATGA MDIINKLSELKLSQKESSGINTSELGLHENQAKLQNCLVGKVVSQRTINIDAFRKTMTKVWYFCRGITIDNIGENLFLINPQSVLGRDRIVEESPWCFDGNLILLKTPTTFDQPEDMIFDDPQFWVQIHHLPLGLRNGKVAQTLGNIIGIVQRVDTNEVDECWGPFLRVRVKMKINEPLCRGLTLNDGPSGKILAAIKYERLPDFCYYCGMIDHNDGSCPLLKTQAKPEKQFGSWMRAASPPRKYHSNASGRGFEGTRGGRGRFGNRQGGKHSWRSESMEEGEHDNDEEPITTNSQLSNDGNGEQQTGTDRRTFSAIASDDPPPQSKLPAAKTGIKCSISLDNANIMDPFPIIADADNLGKEGDGFNGCNGQKSLKISNITNGEGKGNDADESLGHMETNGLENYDGPIPSGKIITTQINIKPNQIMVYQQPNTEGVETNHNPLEGNNIVSPGLFHEATMMEADHYYVKPKSTVQVKENQKNKQPISADSESGKKDRWEQGNISLDKLRLLKGWKRINRQGDHTKVDQSTELMQFASRKRVAENDKLEGSSDKKLKSLVPQKDGIISAEPDQQARREP Homology
BLAST of Lag0017348 vs. NCBI nr
Match: OMO61345.1 (reverse transcriptase [Corchorus capsularis]) HSP 1 Score: 191.0 bits (484), Expect = 2.8e-44 Identity = 91/254 (35.83%), Postives = 142/254 (55.91%), Query Frame = 0
BLAST of Lag0017348 vs. NCBI nr
Match: OMP03234.1 (hypothetical protein COLO4_10561 [Corchorus olitorius]) HSP 1 Score: 182.6 bits (462), Expect = 9.9e-42 Identity = 86/254 (33.86%), Postives = 143/254 (56.30%), Query Frame = 0
BLAST of Lag0017348 vs. NCBI nr
Match: TXG60826.1 (hypothetical protein EZV62_012189 [Acer yangbiense]) HSP 1 Score: 172.6 bits (436), Expect = 1.0e-38 Identity = 87/238 (36.55%), Postives = 139/238 (58.40%), Query Frame = 0
BLAST of Lag0017348 vs. NCBI nr
Match: XP_042980067.1 (uncharacterized protein LOC122310252 [Carya illinoinensis]) HSP 1 Score: 172.6 bits (436), Expect = 1.0e-38 Identity = 83/238 (34.87%), Postives = 131/238 (55.04%), Query Frame = 0
BLAST of Lag0017348 vs. NCBI nr
Match: TXG60685.1 (hypothetical protein EZV62_015258 [Acer yangbiense]) HSP 1 Score: 170.6 bits (431), Expect = 3.9e-38 Identity = 88/226 (38.94%), Postives = 132/226 (58.41%), Query Frame = 0
BLAST of Lag0017348 vs. ExPASy TrEMBL
Match: A0A1R3GTB5 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_23588 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 1.3e-44 Identity = 91/254 (35.83%), Postives = 142/254 (55.91%), Query Frame = 0
BLAST of Lag0017348 vs. ExPASy TrEMBL
Match: A0A1R3K847 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_10561 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 4.8e-42 Identity = 86/254 (33.86%), Postives = 143/254 (56.30%), Query Frame = 0
BLAST of Lag0017348 vs. ExPASy TrEMBL
Match: A0A2N9F689 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10176 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 7.6e-40 Identity = 86/246 (34.96%), Postives = 135/246 (54.88%), Query Frame = 0
BLAST of Lag0017348 vs. ExPASy TrEMBL
Match: A0A5C7HWW6 (Glucan endo-1,3-beta-D-glucosidase OS=Acer yangbiense OX=1000413 GN=EZV62_012189 PE=3 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 4.9e-39 Identity = 87/238 (36.55%), Postives = 139/238 (58.40%), Query Frame = 0
BLAST of Lag0017348 vs. ExPASy TrEMBL
Match: A0A5C7HUW5 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_015258 PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 1.9e-38 Identity = 88/226 (38.94%), Postives = 132/226 (58.41%), Query Frame = 0
BLAST of Lag0017348 vs. TAIR 10
Match: AT3G31430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 76.6 bits (187), Expect = 7.1e-14 Identity = 61/223 (27.35%), Postives = 93/223 (41.70%), Query Frame = 0
BLAST of Lag0017348 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding ) HSP 1 Score: 49.7 bits (117), Expect = 9.3e-06 Identity = 28/131 (21.37%), Postives = 51/131 (38.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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