Lag0017311 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0017311
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	CCHC-type domain-containing protein
Location	chr5: 2033312 .. 2034706 (+)
RNA-Seq Expression	Lag0017311
Synteny	Lag0017311

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCAGAATTTGGGGCATAGAGGGAGCGGTCAGAGTTGAAAGTGCAGGGAGAAATACCTTTATATGCAAGTTTAGAAAGCAAAGGGACAAAATCAGAATAACCAAAGGAGGACCGTGGAGCTATGATGATGCTATAATTATATTTGATGAACCAAAAGCTAACAGCTGCGTGGAAGACCTCGAATTCAAGTCAGTATCTTTTTGGATTCACTTTTACAAATTACCGCGTGTTTGTTTTTGCAGGAAGTACGCCTTAGCTTTGGGCAACTCGATTGGAGAATTTGAAGCGGCAGAAACTGATGGAAATGACAAAATGAAGGGTGTGTCGCTTAGAGTTAAGGTGAAGATAAATGTTAAAGAACCTCTCAAAAGGGGAACCAACGTCAAAATTGGATCGATGGCCGGGAAAACTTGGATTCCGATAACTTACGAAAAACTACCCGATTTCTGTTACTACTGCGGCAGACTCGGCCATGTAGAACAGGACTGTGTAGAAGATGGGTTGAATGAAAGCTCAGAAAGAAGTTATGGAGTTAGTCTAAGAGAAACAAATGCTAGTAAAGGTTTCTATAAAAACTGGTGGAATGGACCAACGAACTCTGATATGAGAGGAAGAGGCAGAGGTAGATTCGGAAGAGGATGGCGAGGTGGAGGCAAAAAAGATTGGCGAAATACAGAACAAAAGACAGAGGCAAGGTGTGCTGAAAATCAGGCTGGTGAAGAAAGTATAGGCAAGCACGGTGAGTCCAAGAAGAAACGGTGGCCGGAAGCATACCAGACACCGGAAAAGGAAGACCGGAACAGGGAAAAGGAAGAAACGGTGGCCAAACGCTGCAGTTCAGAACGATGTGACAACTATACTGACAATTCTGAATCTGGGAATTTTCAGGGGTCAGAGAATACAGCAGGAAAAATGGATTGTAACAGAGGAAAAGAGCCGTTGAAGGAAAAAGACAAAGATAATAATAAATTGACAGGCTTGGGCCCATTTCAAAATAATACCTTGGAAGGTCCGACAAAAAGGACTCCAAGCCCACCTATTCATCAAACGGAAGGCAGGGAAGAAAAGGGTAAAGAAATAGCCAGAGGTACCAAAGAAAGTAAAAAAGAAGGTCAGATTAAGATGGGCGGAAAAGGAAACAATGAAAAATCAACTTTAAGCCCAGGGAAAGGAAAAAAGGATGACAGAATGAAATGGAAAAGAATGGCTAGAGAAAAGGATATACAGATAATGGAAATTCAGAGTATAAAATCAGATACCGGAAAAAGGAAAGCTGAAGACACTCTTGATGAGGAGATAACCAAAAGGAACAAAAAAGACCACGAAAGTTACTTCAATGCGTTTGAAGGGATATCGGCGGAGGCTGGTTTCCAGCCCCGCCGGACGCCATGA

mRNA sequence

ATGCCCAGAATTTGGGGCATAGAGGGAGCGGTCAGAGTTGAAAGTGCAGGGAGAAATACCTTTATATGCAAGTTTAGAAAGCAAAGGGACAAAATCAGAATAACCAAAGGAGGACCGTGGAGCTATGATGATGCTATAATTATATTTGATGAACCAAAAGCTAACAGCTGCGTGGAAGACCTCGAATTCAAGTCAGTATCTTTTTGGATTCACTTTTACAAATTACCGCGTGTTTGTTTTTGCAGGAAGTACGCCTTAGCTTTGGGCAACTCGATTGGAGAATTTGAAGCGGCAGAAACTGATGGAAATGACAAAATGAAGGGTGTGTCGCTTAGAGTTAAGGTGAAGATAAATGTTAAAGAACCTCTCAAAAGGGGAACCAACGTCAAAATTGGATCGATGGCCGGGAAAACTTGGATTCCGATAACTTACGAAAAACTACCCGATTTCTGTTACTACTGCGGCAGACTCGGCCATGTAGAACAGGACTGTGTAGAAGATGGGTTGAATGAAAGCTCAGAAAGAAGTTATGGAGTTAGTCTAAGAGAAACAAATGCTAGTAAAGGTTTCTATAAAAACTGGTGGAATGGACCAACGAACTCTGATATGAGAGGAAGAGGCAGAGGTAGATTCGGAAGAGGATGGCGAGGTGGAGGCAAAAAAGATTGGCGAAATACAGAACAAAAGACAGAGGCAAGGTGTGCTGAAAATCAGGCTGGTGAAGAAAGTATAGGCAAGCACGGTGAGTCCAAGAAGAAACGGTGGCCGGAAGCATACCAGACACCGGAAAAGGAAGACCGGAACAGGGAAAAGGAAGAAACGGTGGCCAAACGCTGCAGTTCAGAACGATGTGACAACTATACTGACAATTCTGAATCTGGGAATTTTCAGGGGTCAGAGAATACAGCAGGAAAAATGGATTGTAACAGAGGAAAAGAGCCGTTGAAGGAAAAAGACAAAGATAATAATAAATTGACAGGCTTGGGCCCATTTCAAAATAATACCTTGGAAGGTCCGACAAAAAGGACTCCAAGCCCACCTATTCATCAAACGGAAGGCAGGGAAGAAAAGGGTAAAGAAATAGCCAGAGGTACCAAAGAAAGTAAAAAAGAAGGTCAGATTAAGATGGGCGGAAAAGGAAACAATGAAAAATCAACTTTAAGCCCAGGGAAAGGAAAAAAGGATGACAGAATGAAATGGAAAAGAATGGCTAGAGAAAAGGATATACAGATAATGGAAATTCAGAGTATAAAATCAGATACCGGAAAAAGGAAAGCTGAAGACACTCTTGATGAGGAGATAACCAAAAGGAACAAAAAAGACCACGAAAGTTACTTCAATGCGTTTGAAGGGATATCGGCGGAGGCTGGTTTCCAGCCCCGCCGGACGCCATGA

Coding sequence (CDS)

ATGCCCAGAATTTGGGGCATAGAGGGAGCGGTCAGAGTTGAAAGTGCAGGGAGAAATACCTTTATATGCAAGTTTAGAAAGCAAAGGGACAAAATCAGAATAACCAAAGGAGGACCGTGGAGCTATGATGATGCTATAATTATATTTGATGAACCAAAAGCTAACAGCTGCGTGGAAGACCTCGAATTCAAGTCAGTATCTTTTTGGATTCACTTTTACAAATTACCGCGTGTTTGTTTTTGCAGGAAGTACGCCTTAGCTTTGGGCAACTCGATTGGAGAATTTGAAGCGGCAGAAACTGATGGAAATGACAAAATGAAGGGTGTGTCGCTTAGAGTTAAGGTGAAGATAAATGTTAAAGAACCTCTCAAAAGGGGAACCAACGTCAAAATTGGATCGATGGCCGGGAAAACTTGGATTCCGATAACTTACGAAAAACTACCCGATTTCTGTTACTACTGCGGCAGACTCGGCCATGTAGAACAGGACTGTGTAGAAGATGGGTTGAATGAAAGCTCAGAAAGAAGTTATGGAGTTAGTCTAAGAGAAACAAATGCTAGTAAAGGTTTCTATAAAAACTGGTGGAATGGACCAACGAACTCTGATATGAGAGGAAGAGGCAGAGGTAGATTCGGAAGAGGATGGCGAGGTGGAGGCAAAAAAGATTGGCGAAATACAGAACAAAAGACAGAGGCAAGGTGTGCTGAAAATCAGGCTGGTGAAGAAAGTATAGGCAAGCACGGTGAGTCCAAGAAGAAACGGTGGCCGGAAGCATACCAGACACCGGAAAAGGAAGACCGGAACAGGGAAAAGGAAGAAACGGTGGCCAAACGCTGCAGTTCAGAACGATGTGACAACTATACTGACAATTCTGAATCTGGGAATTTTCAGGGGTCAGAGAATACAGCAGGAAAAATGGATTGTAACAGAGGAAAAGAGCCGTTGAAGGAAAAAGACAAAGATAATAATAAATTGACAGGCTTGGGCCCATTTCAAAATAATACCTTGGAAGGTCCGACAAAAAGGACTCCAAGCCCACCTATTCATCAAACGGAAGGCAGGGAAGAAAAGGGTAAAGAAATAGCCAGAGGTACCAAAGAAAGTAAAAAAGAAGGTCAGATTAAGATGGGCGGAAAAGGAAACAATGAAAAATCAACTTTAAGCCCAGGGAAAGGAAAAAAGGATGACAGAATGAAATGGAAAAGAATGGCTAGAGAAAAGGATATACAGATAATGGAAATTCAGAGTATAAAATCAGATACCGGAAAAAGGAAAGCTGAAGACACTCTTGATGAGGAGATAACCAAAAGGAACAAAAAAGACCACGAAAGTTACTTCAATGCGTTTGAAGGGATATCGGCGGAGGCTGGTTTCCAGCCCCGCCGGACGCCATGA

Protein sequence

MPRIWGIEGAVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAETDGNDKMKGVSLRVKVKINVKEPLKRGTNVKIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDCVEDGLNESSERSYGVSLRETNASKGFYKNWWNGPTNSDMRGRGRGRFGRGWRGGGKKDWRNTEQKTEARCAENQAGEESIGKHGESKKKRWPEAYQTPEKEDRNREKEETVAKRCSSERCDNYTDNSESGNFQGSENTAGKMDCNRGKEPLKEKDKDNNKLTGLGPFQNNTLEGPTKRTPSPPIHQTEGREEKGKEIARGTKESKKEGQIKMGGKGNNEKSTLSPGKGKKDDRMKWKRMAREKDIQIMEIQSIKSDTGKRKAEDTLDEEITKRNKKDHESYFNAFEGISAEAGFQPRRTP

Homology

[Close]

BLAST of Lag0017311 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 158.3 bits (399), Expect = 1.6e-34
Identity = 75/194 (38.66%), Postives = 110/194 (56.70%), Query Frame = 0


Query: 5   WGIEGAVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFK 64
           W +E  + VES G+N F+  F ++ D  R+ K GPW +D A+I+  +P ++  + +LEF 
Sbjct: 65  WKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEFN 124

Query: 65  SVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAETDGNDKMKGVSLRVKVKINVKEPLK 124
            V+FWIH + LP     +  A+ LGN+IG F   + +      G SLR++V I++ +PL+
Sbjct: 125 RVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPLR 184

Query: 125 RGTNVKIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDC------VEDGLNESSERSYG 184
           RG  + I    G  WIPI YE+LPDFCY+CG +GH   DC       +D    +SE  YG
Sbjct: 185 RGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE--YG 244

Query: 185 VSLRETNASKGFYK 193
             LR   +  G  K
Sbjct: 245 PWLRFVGSKAGAQK 256

[Close]

BLAST of Lag0017311 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 150.6 bits (379), Expect = 3.3e-32
Identity = 71/174 (40.80%), Postives = 106/174 (60.92%), Query Frame = 0


Query: 10  AVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFKSVSFW 69
           A  V+  G N F+  F +  D+ RI + GPW++D A+II D P + +   D++F++VS W
Sbjct: 71  AFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMDFRNVSLW 130

Query: 70  IHFYKLPRVCFCRKYALALGNSIGEFEAAETDGNDKMKGVSLRVKVKINVKEPLKRGTNV 129
           +HF+ L   C  +  A  LGN+IG FE  E++ N+   G  LRV+V+ +V +PL RG  +
Sbjct: 131 VHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDVMKPLHRGIKL 190

Query: 130 KIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDCVEDGLNESSER-SYGVSLR 183
            +    G  WIPI YE+LPDF Y+CGRL H+ +DC +  ++  S+   YG  LR
Sbjct: 191 NLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNLQYGPWLR 244

[Close]

BLAST of Lag0017311 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 149.8 bits (377), Expect = 5.7e-32
Identity = 80/235 (34.04%), Postives = 125/235 (53.19%), Query Frame = 0


Query: 1   MPRIWGIEGAVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVED 60
           M  +W +  + R E  G N ++  F+   +K R+   GPW+++ ++++   P A +   D
Sbjct: 58  MKSVWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLD 117

Query: 61  LEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAETDGNDKMKGVSLRVKVKINVK 120
           + F   +FWI  + +P  C   + A  LG  +G+ E  E DG D   G  +RV+VKI+V 
Sbjct: 118 MNFNFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVS 177

Query: 121 EPLKRGTNVKIGSMAGK-TWIPITYEKLPDFCYYCGRLGHVEQDCVEDG--LNESSERSY 180
           +PL+RG  +K+ +  GK  W P+ YEKLPDFCY CG++GH  ++C +    +  +S   Y
Sbjct: 178 KPLRRG--IKLKNSDGKDIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPEQY 237

Query: 181 GVSLRETNASKGFYKNWWNGPTNSDMRGRGRGRFGRGWR----GGGKKDWRNTEQ 229
           G  LR T   K             ++  RG GRFGRG +     GG+ DWR  ++
Sbjct: 238 GDWLRATLLKKSV------SHPEEEVFWRG-GRFGRGHQVNGGRGGRGDWRRRDE 283

[Close]

BLAST of Lag0017311 vs. NCBI nr
Match: TXG48431.1 (hypothetical protein EZV62_027725 [Acer yangbiense])

HSP 1 Score: 146.4 bits (368), Expect = 6.3e-31
Identity = 81/247 (32.79%), Postives = 126/247 (51.01%), Query Frame = 0


Query: 3   RIWGIEGAVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLE 62
           RIW ++G V +E    N +   F+   D+ R+  GGPWS+D A+I+ +EP+    +  L 
Sbjct: 50  RIWKVQGGVEIEVISTNIYAFPFQSFDDRKRVFMGGPWSFDGALIVLEEPEGKGAINSLL 109

Query: 63  FKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAETDGNDKMKGVSLRVKVKINVKEP 122
           F SV FW+H   +P +   +     LG+ IGE    +   +    G  +RV+V + V +P
Sbjct: 110 FNSVDFWVHITNVPMIYMTKDIGKFLGSIIGEVREVDVGPSSDCLGKFMRVRVAVEVDKP 169

Query: 123 LKRGTNVKIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDCV---EDGLNESSERSYGV 182
           L+R   V +     +T +PI YE+LP FC+ CG +GH+  +C    EDGL E S   YG 
Sbjct: 170 LRRFLRVDVLGDGEETVMPIQYERLPSFCFLCGLVGHLVHECTSYGEDGLREGSGMVYGA 229

Query: 183 SLRETNASKGFYKNWWNGPTNSDMRGRGRGRFGRG-WRGGGKKDWRNTEQKTEARCAENQ 242
            LR T     + +  W G  + DMR +G  R         G+ + R+  +   AR  E  
Sbjct: 230 WLRATAPLVQYGRGNWGG--HVDMRNQGAFRQDPNVGHHTGEFNQRSWVKSGNARVPEGS 289

Query: 243 AGEESIG 246
           +G+++ G
Sbjct: 290 SGKKTSG 294

[Close]

BLAST of Lag0017311 vs. NCBI nr
Match: TXG64850.1 (hypothetical protein EZV62_011844 [Acer yangbiense])

HSP 1 Score: 142.5 bits (358), Expect = 9.1e-30
Identity = 69/192 (35.94%), Postives = 103/192 (53.65%), Query Frame = 0


Query: 1   MPRIWGIEGAVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVED 60
           M +IW + G V +E    N F   F    D++R+ +GGPWS+D AIIIFDEP     + +
Sbjct: 60  MSKIWRVSGGVDIEPIKGNIFAFYFTNDEDRMRVLRGGPWSFDRAIIIFDEPTGTRDISN 119

Query: 61  LEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAETDGNDKMKGVSLRVKVKINVK 120
           L F  V FW+  + LP +C   +  + LG+ IGE    ++       G  +RV+V I V 
Sbjct: 120 LRFNYVDFWVQIHNLPLLCMNEEIGITLGSLIGEVRDYDSGITSDASGRYIRVRVTIPVD 179

Query: 121 EPLKRGTNVKIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDCVED----GLNESSERS 180
           +PL+R   V +      + + + YE+L D+C+ CGRLGH+  +CVE      L+  + R 
Sbjct: 180 KPLQRSLRVDLLGDEKISTMLLRYERLLDYCFKCGRLGHLLDECVEKVNVRDLSSDASRK 239

Query: 181 YGVSLRETNASK 189
            GV LR  +  K
Sbjct: 240 LGVWLRAVSPPK 251

[Close]

BLAST of Lag0017311 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 7.7e-35
Identity = 75/194 (38.66%), Postives = 110/194 (56.70%), Query Frame = 0


Query: 5   WGIEGAVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFK 64
           W +E  + VES G+N F+  F ++ D  R+ K GPW +D A+I+  +P ++  + +LEF 
Sbjct: 65  WKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEFN 124

Query: 65  SVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAETDGNDKMKGVSLRVKVKINVKEPLK 124
            V+FWIH + LP     +  A+ LGN+IG F   + +      G SLR++V I++ +PL+
Sbjct: 125 RVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPLR 184

Query: 125 RGTNVKIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDC------VEDGLNESSERSYG 184
           RG  + I    G  WIPI YE+LPDFCY+CG +GH   DC       +D    +SE  YG
Sbjct: 185 RGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE--YG 244

Query: 185 VSLRETNASKGFYK 193
             LR   +  G  K
Sbjct: 245 PWLRFVGSKAGAQK 256

[Close]

BLAST of Lag0017311 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.6e-32
Identity = 71/174 (40.80%), Postives = 106/174 (60.92%), Query Frame = 0


Query: 10  AVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFKSVSFW 69
           A  V+  G N F+  F +  D+ RI + GPW++D A+II D P + +   D++F++VS W
Sbjct: 71  AFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMDFRNVSLW 130

Query: 70  IHFYKLPRVCFCRKYALALGNSIGEFEAAETDGNDKMKGVSLRVKVKINVKEPLKRGTNV 129
           +HF+ L   C  +  A  LGN+IG FE  E++ N+   G  LRV+V+ +V +PL RG  +
Sbjct: 131 VHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDVMKPLHRGIKL 190

Query: 130 KIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDCVEDGLNESSER-SYGVSLR 183
            +    G  WIPI YE+LPDF Y+CGRL H+ +DC +  ++  S+   YG  LR
Sbjct: 191 NLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNLQYGPWLR 244

[Close]

BLAST of Lag0017311 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.8e-32
Identity = 80/235 (34.04%), Postives = 125/235 (53.19%), Query Frame = 0


Query: 1   MPRIWGIEGAVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVED 60
           M  +W +  + R E  G N ++  F+   +K R+   GPW+++ ++++   P A +   D
Sbjct: 58  MKSVWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLD 117

Query: 61  LEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAETDGNDKMKGVSLRVKVKINVK 120
           + F   +FWI  + +P  C   + A  LG  +G+ E  E DG D   G  +RV+VKI+V 
Sbjct: 118 MNFNFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVS 177

Query: 121 EPLKRGTNVKIGSMAGK-TWIPITYEKLPDFCYYCGRLGHVEQDCVEDG--LNESSERSY 180
           +PL+RG  +K+ +  GK  W P+ YEKLPDFCY CG++GH  ++C +    +  +S   Y
Sbjct: 178 KPLRRG--IKLKNSDGKDIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPEQY 237

Query: 181 GVSLRETNASKGFYKNWWNGPTNSDMRGRGRGRFGRGWR----GGGKKDWRNTEQ 229
           G  LR T   K             ++  RG GRFGRG +     GG+ DWR  ++
Sbjct: 238 GDWLRATLLKKSV------SHPEEEVFWRG-GRFGRGHQVNGGRGGRGDWRRRDE 283

[Close]

BLAST of Lag0017311 vs. ExPASy TrEMBL
Match: A0A5C7GUN1 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027725 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.0e-31
Identity = 81/247 (32.79%), Postives = 126/247 (51.01%), Query Frame = 0


Query: 3   RIWGIEGAVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLE 62
           RIW ++G V +E    N +   F+   D+ R+  GGPWS+D A+I+ +EP+    +  L 
Sbjct: 50  RIWKVQGGVEIEVISTNIYAFPFQSFDDRKRVFMGGPWSFDGALIVLEEPEGKGAINSLL 109

Query: 63  FKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAETDGNDKMKGVSLRVKVKINVKEP 122
           F SV FW+H   +P +   +     LG+ IGE    +   +    G  +RV+V + V +P
Sbjct: 110 FNSVDFWVHITNVPMIYMTKDIGKFLGSIIGEVREVDVGPSSDCLGKFMRVRVAVEVDKP 169

Query: 123 LKRGTNVKIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDCV---EDGLNESSERSYGV 182
           L+R   V +     +T +PI YE+LP FC+ CG +GH+  +C    EDGL E S   YG 
Sbjct: 170 LRRFLRVDVLGDGEETVMPIQYERLPSFCFLCGLVGHLVHECTSYGEDGLREGSGMVYGA 229

Query: 183 SLRETNASKGFYKNWWNGPTNSDMRGRGRGRFGRG-WRGGGKKDWRNTEQKTEARCAENQ 242
            LR T     + +  W G  + DMR +G  R         G+ + R+  +   AR  E  
Sbjct: 230 WLRATAPLVQYGRGNWGG--HVDMRNQGAFRQDPNVGHHTGEFNQRSWVKSGNARVPEGS 289

Query: 243 AGEESIG 246
           +G+++ G
Sbjct: 290 SGKKTSG 294

[Close]

BLAST of Lag0017311 vs. ExPASy TrEMBL
Match: A0A5C7I6E5 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_011844 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 4.4e-30
Identity = 69/192 (35.94%), Postives = 103/192 (53.65%), Query Frame = 0


Query: 1   MPRIWGIEGAVRVESAGRNTFICKFRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVED 60
           M +IW + G V +E    N F   F    D++R+ +GGPWS+D AIIIFDEP     + +
Sbjct: 60  MSKIWRVSGGVDIEPIKGNIFAFYFTNDEDRMRVLRGGPWSFDRAIIIFDEPTGTRDISN 119

Query: 61  LEFKSVSFWIHFYKLPRVCFCRKYALALGNSIGEFEAAETDGNDKMKGVSLRVKVKINVK 120
           L F  V FW+  + LP +C   +  + LG+ IGE    ++       G  +RV+V I V 
Sbjct: 120 LRFNYVDFWVQIHNLPLLCMNEEIGITLGSLIGEVRDYDSGITSDASGRYIRVRVTIPVD 179

Query: 121 EPLKRGTNVKIGSMAGKTWIPITYEKLPDFCYYCGRLGHVEQDCVED----GLNESSERS 180
           +PL+R   V +      + + + YE+L D+C+ CGRLGH+  +CVE      L+  + R 
Sbjct: 180 KPLQRSLRVDLLGDEKISTMLLRYERLLDYCFKCGRLGHLLDECVEKVNVRDLSSDASRK 239

Query: 181 YGVSLRETNASK 189
            GV LR  +  K
Sbjct: 240 LGVWLRAVSPPK 251

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BLAST of Lag0017311 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 51.6 bits (122), Expect = 2.0e-06
Identity = 34/144 (23.61%), Postives = 54/144 (37.50%), Query Frame = 0


Query: 25  FRKQRDKIRITKGGPWSYDDAIIIFDEPKANSCVEDLEFKSVSFWIHFYKLPRVCFCRKY 84
           F+ +     I + GPWS++D + +    +      D EFK + FWI    +P      + 
Sbjct: 66  FQSEESMFSILRRGPWSFNDWMCVIQ--RWTKLHSDAEFKRIPFWIQIRGIPLRFLTARI 125

Query: 85  ALALGNSIGEFEAAETDGNDKMKGVSLRVKVKINVKEPLKRGTNVKIGSMAGKTWIPITY 144
             ++G  +G F   ET+                        G +V +        +   Y
Sbjct: 126 ITSIGERMGLF--LETN-----------------------LGRDVSV--------LKFQY 174

Query: 145 EKLPDFCYYCGRLGHVEQDCVEDG 169
           EKL +FC  CG L H   +C   G
Sbjct: 186 EKLKNFCTTCGMLSHDASECPTSG 174

The following BLAST results are available for this feature:

BLAST of Lag0017311 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156185.1	1.6e-34	38.66	uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha...	[more]
XP_022132681.1	3.3e-32	40.80	uncharacterized protein LOC111005481 [Momordica charantia]	[more]
XP_022149484.1	5.7e-32	34.04	uncharacterized protein LOC111017902 [Momordica charantia]	[more]
TXG48431.1	6.3e-31	32.79	hypothetical protein EZV62_027725 [Acer yangbiense]	[more]
TXG64850.1	9.1e-30	35.94	hypothetical protein EZV62_011844 [Acer yangbiense]	[more]

BLAST of Lag0017311 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0017311 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DU55	7.7e-35	38.66	uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1BSZ1	1.6e-32	40.80	uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1D765	2.8e-32	34.04	uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A5C7GUN1	3.0e-31	32.79	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027725 PE=4 SV=1	[more]
A0A5C7I6E5	4.4e-30	35.94	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01184...	[more]

BLAST of Lag0017311 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42140.1	2.0e-06	23.61	zinc ion binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 118..164 e-value: 6.6E-12 score: 44.9
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 1..115 e-value: 5.2E-17 score: 61.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..399
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 415..464
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 326..347
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 415..446
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 306..324
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 286..304
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 348..377
None	No IPR available	PANTHER	PTHR31286:SF62	SUBFAMILY NOT NAMED	coord: 17..429
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 17..429
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 151..164 score: 9.817547

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0017311.1	Lag0017311.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding