Lag0017310 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0017310
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptionglycine-rich cell wall structural protein 1.8-like
Locationchr5: 2030515 .. 2031180 (+)
RNA-Seq ExpressionLag0017310
SyntenyLag0017310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTATCACTAGAGTTTTATGTCTTGGCTTTCTTCTTCTCGTGGGTTTAGGATTAGCTTCGGCTGCTAGAACCCTTCTTGATTATGATCCTCGTACACGTCACTATGATTATGATCGTCCTAATCCAAGAGTAGGGTACGATCCTGACCATCGTGATGAGTCCTATGATAATGTATATGGTGGAAGAGTTGGAGGCTCTGCTCTTGGAGGTTCAGGATATGGAAGTGGTGGAGGTGGAGGAAGTGGCACTGGATATGGAGGTGGAGCAGAGCATGGTGTTGGTTATGGTAGTGGTGGAGGTGGAGGATATGGAAGCGGAGGCAATACTGGATACGGTCCAGGAGGAGATCGTGGTGTTGGTTATGGAAGTGGAGAAGGTGCTAGGTCTGGCAATGGTTACGAAGGTTCTCGTGGATATGGAGCAGGAAAAGGAAGTGGTAGTGGAGCAGGTTATGGTTCAGGAGGAGCACGTGGTAGTGGATATGGGAATGGTGGAGGTGCTGGTGGTGGCTATGGAGGGGGAGAAGGAGTAGGAAGCCATGGAGGTGGTAGTGGAGTTGGTTCCGGAGGTGGTTACGGCGGTGGAGCCGCACATGGAGGAGGATATGATAATAACAAAGGAAGTGGAGAGGAAGGAGGATATGACGGTGGATATGCTCCTTAA

mRNA sequence

ATGGCTATCACTAGAGTTTTATGTCTTGGCTTTCTTCTTCTCGTGGGTTTAGGATTAGCTTCGGCTGCTAGAACCCTTCTTGATTATGATCCTCGTACACGTCACTATGATTATGATCGTCCTAATCCAAGAGTAGGGTACGATCCTGACCATCGTGATGAGTCCTATGATAATGTATATGGTGGAAGAGTTGGAGGCTCTGCTCTTGGAGGTTCAGGATATGGAAGTGGTGGAGGTGGAGGAAGTGGCACTGGATATGGAGGTGGAGCAGAGCATGGTGTTGGTTATGGTAGTGGTGGAGGTGGAGGATATGGAAGCGGAGGCAATACTGGATACGGTCCAGGAGGAGATCGTGGTGTTGGTTATGGAAGTGGAGAAGGTGCTAGGTCTGGCAATGGTTACGAAGGTTCTCGTGGATATGGAGCAGGAAAAGGAAGTGGTAGTGGAGCAGGTTATGGTTCAGGAGGAGCACGTGGTAGTGGATATGGGAATGGTGGAGGTGCTGGTGGTGGCTATGGAGGGGGAGAAGGAGTAGGAAGCCATGGAGGTGGTAGTGGAGTTGGTTCCGGAGGTGGTTACGGCGGTGGAGCCGCACATGGAGGAGGATATGATAATAACAAAGGAAGTGGAGAGGAAGGAGGATATGACGGTGGATATGCTCCTTAA

Coding sequence (CDS)

ATGGCTATCACTAGAGTTTTATGTCTTGGCTTTCTTCTTCTCGTGGGTTTAGGATTAGCTTCGGCTGCTAGAACCCTTCTTGATTATGATCCTCGTACACGTCACTATGATTATGATCGTCCTAATCCAAGAGTAGGGTACGATCCTGACCATCGTGATGAGTCCTATGATAATGTATATGGTGGAAGAGTTGGAGGCTCTGCTCTTGGAGGTTCAGGATATGGAAGTGGTGGAGGTGGAGGAAGTGGCACTGGATATGGAGGTGGAGCAGAGCATGGTGTTGGTTATGGTAGTGGTGGAGGTGGAGGATATGGAAGCGGAGGCAATACTGGATACGGTCCAGGAGGAGATCGTGGTGTTGGTTATGGAAGTGGAGAAGGTGCTAGGTCTGGCAATGGTTACGAAGGTTCTCGTGGATATGGAGCAGGAAAAGGAAGTGGTAGTGGAGCAGGTTATGGTTCAGGAGGAGCACGTGGTAGTGGATATGGGAATGGTGGAGGTGCTGGTGGTGGCTATGGAGGGGGAGAAGGAGTAGGAAGCCATGGAGGTGGTAGTGGAGTTGGTTCCGGAGGTGGTTACGGCGGTGGAGCCGCACATGGAGGAGGATATGATAATAACAAAGGAAGTGGAGAGGAAGGAGGATATGACGGTGGATATGCTCCTTAA

Protein sequence

MAITRVLCLGFLLLVGLGLASAARTLLDYDPRTRHYDYDRPNPRVGYDPDHRDESYDNVYGGRVGGSALGGSGYGSGGGGGSGTGYGGGAEHGVGYGSGGGGGYGSGGNTGYGPGGDRGVGYGSGEGARSGNGYEGSRGYGAGKGSGSGAGYGSGGARGSGYGNGGGAGGGYGGGEGVGSHGGGSGVGSGGGYGGGAAHGGGYDNNKGSGEEGGYDGGYAP
Homology
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BLAST of Lag0017310 vs. NCBI nr
Match: XP_022923448.1 (glycine-rich cell wall structural protein 1.8-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 187.2 bits (474), Expect = 1.5e-43
Identity = 163/271 (60.15%), Postives = 176/271 (64.94%), Query Frame = 0 

Query: 1   MAITRVLCLGFLLLVGLGLASAARTLLDYDPRTRHYDYDRPNPRVGYDPDHRDESYDNVY 60
           MAITRVLCL FLLLVGLGLASAARTLLDYDPRTRHY YDRPNPR GYD  HRDESYDN Y
Sbjct: 1   MAITRVLCLSFLLLVGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAY 60

Query: 61  GGRVGG------SALGGSGYGSGG-------------------------GGGSGTGYGGG 120
           GGR GG      SALGGSGYGSGG                         G GSG+ YGGG
Sbjct: 61  GGRSGGGYGDGSSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120

Query: 121 AEHGVGYGSGGGGGYGSGGNTGYGPGGDRGVGYGSGEGARSGNGYEGSR-----GYGAGK 180
            +HGVGY  G  GGY +GGN GYG G D  +GYGSG     GNG  G       GYG+  
Sbjct: 121 EDHGVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSGGYENGGNGGYGQGRDHDIGYGSRN 180

Query: 181 GSGSGAGYGSGGARGSGYGNGGGAGGGYGGGEGVGSHGGGSGVGSGGGYGG--------- 221
           G+G+G G G+G     GYGNGGG  GGYG G+GVGSH GGSG+G+GGGYGG         
Sbjct: 181 GNGNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGSHAGGSGIGAGGGYGGHAGGSGIGA 240

[Close]
BLAST of Lag0017310 vs. NCBI nr
Match: KAG6577709.1 (hypothetical protein SDJN03_25283, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 185.3 bits (469), Expect = 5.8e-43
Identity = 161/252 (63.89%), Postives = 171/252 (67.86%), Query Frame = 0 

Query: 1   MAITRVLCLGFLLLVGLGLASAARTLLDYDPRTRHYDYDRPNPRVGYDPDHRDESYDNVY 60
           MAITRVLCL FLLLVGLGLASAARTLLDYDPRTRHY YDRPNPR GYD  HRDESYDNVY
Sbjct: 1   MAITRVLCLSFLLLVGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNVY 60

Query: 61  GGR------VGGSALGGSGYGSGG-------------------------GGGSGTGYGGG 120
           GGR      VGGSALGGSGYGSGG                         G GSG+ YGGG
Sbjct: 61  GGRSGGGYGVGGSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120

Query: 121 AEHGVGYGSGGGGGYGSGGNTGYGPGGDRGVGYGSGEGARSGNGYEGSRGYGAGKGSGSG 180
            +HGVGYG G  GGY +GGN GYG G D  +GYGS  G  +GNGY  S GY  G G G  
Sbjct: 121 EDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNG--NGNGYGDSHGY--GNGGGVD 180

Query: 181 AGYGSG-GARGSGYGNGGGAGGGYGGGEGVGSHGGGSGVGSGGGYGGGAAHGGGYDNNKG 221
            GYG G G  G   G+G GAGGGYGG      H GGSG+G+GG YG G AHGG +DN+KG
Sbjct: 181 GGYGRGDGVGGHAGGSGIGAGGGYGG------HAGGSGIGAGGAYGSGGAHGGEHDNSKG 240

[Close]
BLAST of Lag0017310 vs. NCBI nr
Match: XP_023552983.1 (glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 185.3 bits (469), Expect = 5.8e-43
Identity = 161/254 (63.39%), Postives = 171/254 (67.32%), Query Frame = 0 

Query: 1   MAITRVLCLGFLLLVGLGLASAARTLLDYDPRTRHYDYDRPNPRVGYDPDHRDESYDNVY 60
           MAITRVLCL FLLLVG GLASAARTLLDYDPRTRHY YDRPNPR GYD  HRDESYDNVY
Sbjct: 1   MAITRVLCLSFLLLVGFGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNVY 60

Query: 61  GGR------VGGSALGGSGYGSGG-------------------------GGGSGTGYGGG 120
           GGR      VGGSALGGSGYGSGG                         G GSG+ YGGG
Sbjct: 61  GGRSGGGYGVGGSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120

Query: 121 AEHGVGYGSGGGGGYGSGGNTGYGPGGDRGVGYGS--GEGARSGNGYEGSRGYGAGKGSG 180
            +HGVGYG G  GGY +GGN GYG G D  +GYGS  G G  +GNGY  S GY  G G G
Sbjct: 121 EDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGY--GNGGG 180

Query: 181 SGAGYGSG-GARGSGYGNGGGAGGGYGGGEGVGSHGGGSGVGSGGGYGGGAAHGGGYDNN 221
              GYG G G  G   G+G GAGGGYGG      H GGSG+G+GG YG G AHGG +DN+
Sbjct: 181 VDGGYGRGDGVGGHAGGSGIGAGGGYGG------HAGGSGIGAGGAYGSGGAHGGEHDNS 240

[Close]
BLAST of Lag0017310 vs. NCBI nr
Match: XP_022923449.1 (glycine-rich cell wall structural protein 1.8-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 184.5 bits (467), Expect = 9.9e-43
Identity = 161/269 (59.85%), Postives = 176/269 (65.43%), Query Frame = 0 

Query: 1   MAITRVLCLGFLLLVGLGLASAARTLLDYDPRTRHYDYDRPNPRVGYDPDHRDESYDNVY 60
           MAITRVLCL FLLLVGLGLASAARTLLDYDPRTRHY YDRPNPR GYD  HRDESYDN Y
Sbjct: 1   MAITRVLCLSFLLLVGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAY 60

Query: 61  GGRVGG------SALGGSGYGSGG-------------------------GGGSGTGYGGG 120
           GGR GG      SALGGSGYGSGG                         G GSG+ YGGG
Sbjct: 61  GGRSGGGYGDGSSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120

Query: 121 AEHGVGYGSGGGGGYGSGGNTGYGPGGDRGVGYGSGEGARS---GNGYEGSRGYGAGKGS 180
            +HGVGY  G  GGY +GGN GYG G D  +GYGS E   +   G G +   GYG+  G+
Sbjct: 121 EDHGVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSYENGGNGGYGQGRDHDIGYGSRNGN 180

Query: 181 GSGAGYGSGGARGSGYGNGGGAGGGYGGGEGVGSHGGGSGVGSGGGYGG----------- 221
           G+G G G+G     GYGNGGG  GGYG G+GVGSH GGSG+G+GGGYGG           
Sbjct: 181 GNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGSHAGGSGIGAGGGYGGHAGGSGIGAGG 240

[Close]
BLAST of Lag0017310 vs. NCBI nr
Match: XP_023552981.1 (glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 184.5 bits (467), Expect = 9.9e-43
Identity = 161/254 (63.39%), Postives = 171/254 (67.32%), Query Frame = 0 

Query: 1   MAITRVLCLGFLLLVGLGLASAARTLLDYDPRTRHYDYDRPNPRVGYDPDHRDESYDNVY 60
           MAITRVLCL FLLLVG GLASAARTLLDYDPRTRHY YDRPNPR GYD  HRDESYDNVY
Sbjct: 1   MAITRVLCLTFLLLVGFGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNVY 60

Query: 61  GGR------VGGSALGGSGYGSGG-------------------------GGGSGTGYGGG 120
           GGR      VGGSALGGSGYGSGG                         G GSG+ YGGG
Sbjct: 61  GGRSGGGYGVGGSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120

Query: 121 AEHGVGYGSGGGGGYGSGGNTGYGPGGDRGVGYGS--GEGARSGNGYEGSRGYGAGKGSG 180
            +HGVGYG G  GGY +GGN GYG G D  +GYGS  G G  +GNGY  S GY  G G G
Sbjct: 121 EDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGY--GNGGG 180

Query: 181 SGAGYGSG-GARGSGYGNGGGAGGGYGGGEGVGSHGGGSGVGSGGGYGGGAAHGGGYDNN 221
              GYG G G  G   G+G GAGGGYGG      H GGSG+G+GG YG G AHGG +DN+
Sbjct: 181 VDGGYGRGDGVGGHAGGSGIGAGGGYGG------HAGGSGIGAGGAYGSGGAHGGEHDNS 240

[Close]
BLAST of Lag0017310 vs. ExPASy Swiss-Prot
Match: P10496 (Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.2e-08
Identity = 113/241 (46.89%), Postives = 128/241 (53.11%), Query Frame = 0 

Query: 3   ITRVLCLGFLLLVGLGLASAARTLLDYDPRTRHYDYDRPNPRVGYDPDH-RDESYDNV-- 62
           I R+  L FL+L+ LG+ SA R LL  D               GY   H     Y     
Sbjct: 4   IHRLPSLVFLVLLALGVCSARRALLTLD--------------AGYGLGHGTGGGYGGAAG 63

Query: 63  -YGGRVGGSALGGS---------GYGSGGGGGSGTGYGGGAEHGVGYGSGGGGGYGSGGN 122
            YGG  GG + GG          GYG G GGG G G G G + G GY  GGGGG G GG 
Sbjct: 64  SYGGGGGGGSGGGGGYAGEHGVVGYGGGSGGGQGGGVGYGGDQGAGY--GGGGGSGGGGG 123

Query: 123 TGYGPGGDRGVGYGSGEGARSGNGY----EGSRGYGAGKGSGS--GAGYGSGGARGSGYG 182
             YG GG+RG GYG G+G  +G GY    E   GYG G GSG+  G GY +GGA+G GYG
Sbjct: 124 VAYGGGGERG-GYGGGQGGGAGGGYGAGGEHGIGYGGGGGSGAGGGGGYNAGGAQGGGYG 183

Query: 183 NGGGAGGGYGGGEGVGSHGG------GSGVGSGGGYGGGAAHGGGYDNNKGSGEEGGYDG 219
            GGGAGGG GGG   G HGG      G+G G+GGGYGGG  HGGG    +G G  GGY  
Sbjct: 184 TGGGAGGGGGGG---GDHGGGYGGGQGAGGGAGGGYGGGGEHGGGGGGGQGGGAGGGYGA 224

[Close]
BLAST of Lag0017310 vs. ExPASy Swiss-Prot
Match: P10495 (Glycine-rich cell wall structural protein 1.0 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.0e-06
Identity = 117/254 (46.06%), Postives = 133/254 (52.36%), Query Frame = 0 

Query: 1   MAITRVLCLGFL-LLVGLGLASAARTLLDYDPRTRHY------DYDRPNPRVGYDPDHRD 60
           MA ++VL    L + V  G+ SAARTLL  + R   +       Y       G       
Sbjct: 1   MATSKVLLSNVLFVFVCFGICSAARTLLTLEDRVNLHVGTVVGGYGGGGGSGGGGGGAAV 60

Query: 61  ESYDNVYGGRVGGSALGGSGYGS-----GGGGGSGTGYGGGAE-----------HGVGYG 120
           E     YG   GG    G+GYG+     GGGGG+G G GGGA+            G GYG
Sbjct: 61  ELGGGGYGEGAGGGEGAGAGYGAAGGGHGGGGGNGGGGGGGADGGGYGGGAGKGGGEGYG 120

Query: 121 SGG--GGGYGSGGNTGYGPG---GDRGVGYGSGEGARSGNGYEGSRGYGAGKGSGSGAGY 180
            GG  GGGYG GG +G G G   G  G GYG GEG+ +G GY G+ G G G G+G G G 
Sbjct: 121 GGGANGGGYGGGGGSGGGGGGGAGGAGSGYGGGEGSGAGGGYGGANG-GGGGGNGGGGGG 180

Query: 181 GSGGARGSGYGNGG-----GAGGGYGGGEGVGSHGGGSGVGSGGGYGGGAAHGGGYDNNK 222
           GSGGA G G   GG     GAGGGYGGG   G  G GSG G GGGYGGG A G GY    
Sbjct: 181 GSGGAHGGGAAGGGEGAGQGAGGGYGGG-AAGGGGRGSGGGGGGGYGGGGARGSGYGGGG 240

[Close]
BLAST of Lag0017310 vs. ExPASy Swiss-Prot
Match: Q9SIH2 (Glycine-rich protein DOT1 OS=Arabidopsis thaliana OX=3702 GN=DOT1 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.9e-05
Identity = 107/237 (45.15%), Postives = 118/237 (49.79%), Query Frame = 0 

Query: 14  LVGLGLASAARTLL---DYDPRTRHYDYDR-------------PNPRVGYDPDHRDESYD 73
           L+GLGL SA R LL   + +     Y  +              P    GY     +    
Sbjct: 13  LIGLGLCSARRALLSSSESEAEVAAYGVNSGLSAGLGVGIGGGPGGGSGYGGGSGEGGGA 72

Query: 74  NVYG-GRVGGSALGGSGYGSGGGGGSGT--GYGGGAEH--GVGYGSG-----GGGGYGSG 133
             +G G +GG   GG G G+GGGGG G   GYGGG+    G GYG G     GGGG G  
Sbjct: 73  GGHGEGHIGGGGGGGHGGGAGGGGGGGPGGGYGGGSGEGGGAGYGGGEAGGHGGGGGGGA 132

Query: 134 GNTGYGPGGDRGVGYGSGEGARSGNGYEG------SRGYGAGKGSGSGAGYGSGGARGSG 193
           G  G G GG  G GYG G+GA +G GY G        G G G G G G G G GGA G G
Sbjct: 133 GGGGGGGGGAHGGGYGGGQGAGAGGGYGGGGAGGHGGGGGGGNGGGGGGGSGEGGAHGGG 192

Query: 194 YGNGGGAGGGYGGGEGVGSHGGGSGVGSGGGYGGGAAHGGGYDNNKGSGEEGGYDGG 219
           YG GGGAG GYGGG G G HGGG   G GGG GGG   GGGY    G G  GG  GG
Sbjct: 193 YGAGGGAGEGYGGGAGAGGHGGGG--GGGGGSGGGGGGGGGYAAASGYGHGGGAGGG 247

[Close]
BLAST of Lag0017310 vs. ExPASy Swiss-Prot
Match: P0C5C7 (Glycine-rich cell wall structural protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=GRP0.9 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 5.0e-05
Identity = 97/208 (46.63%), Postives = 112/208 (53.85%), Query Frame = 0 

Query: 1   MAITRVLCLGFLLLVGLGLASAARTLLDYDPRTRHYDYDRPNPRVGYDPDHRDESYDNVY 60
           MA T+ L L  L+L+ +G+ ++ARTLL Y P                             
Sbjct: 1   MATTKHLALAILVLLSIGMTTSARTLLGYGP---------------------GGGGGGGG 60

Query: 61  GGRVGGSALGGSGYGSGGGGGSGTGYGGGAEHGVGYGSGGGGGYGSGGNTGYGPGGDRGV 120
           GG  GG   GGSGYGSG G G G G GG A  G G G GGGGG G GG +G G G  +G 
Sbjct: 61  GGEGGGGGYGGSGYGSGSGYGEGGGSGGAAGGGYGRGGGGGGGGGEGGGSGSGYGSGQGS 120

Query: 121 GYGSGEGARSGNGYEGSRGYGAGKGSGSGAGYGSGGARGSGYGNGGGA--GGGY---GGG 180
           GYG+G G   G G  G  G G G+G G+G GYG G   GSGYG+G G   GGGY   GGG
Sbjct: 121 GYGAGVGGAGGYGSGG--GGGGGQGGGAG-GYGQGSGYGSGYGSGAGGAHGGGYGSGGGG 180

Query: 181 EGVGSHGGGSGVGSGGGYGGGAAHGGGY 204
            G G  GGGSG GSG GYG G+  G G+
Sbjct: 181 GGGGGQGGGSGSGSGSGYGSGSGGGNGH 184

[Close]
BLAST of Lag0017310 vs. ExPASy Swiss-Prot
Match: A3C5A7 (Glycine-rich cell wall structural protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=GRP0.9 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 5.0e-05
Identity = 97/208 (46.63%), Postives = 112/208 (53.85%), Query Frame = 0 

Query: 1   MAITRVLCLGFLLLVGLGLASAARTLLDYDPRTRHYDYDRPNPRVGYDPDHRDESYDNVY 60
           MA T+ L L  L+L+ +G+ ++ARTLL Y P                             
Sbjct: 1   MATTKHLALAILVLLSIGMTTSARTLLGYGP---------------------GGGGGGGG 60

Query: 61  GGRVGGSALGGSGYGSGGGGGSGTGYGGGAEHGVGYGSGGGGGYGSGGNTGYGPGGDRGV 120
           GG  GG   GGSGYGSG G G G G GG A  G G G GGGGG G GG +G G G  +G 
Sbjct: 61  GGEGGGGGYGGSGYGSGSGYGEGGGSGGAAGGGYGRGGGGGGGGGEGGGSGSGYGSGQGS 120

Query: 121 GYGSGEGARSGNGYEGSRGYGAGKGSGSGAGYGSGGARGSGYGNGGGA--GGGY---GGG 180
           GYG+G G   G G  G  G G G+G G+G GYG G   GSGYG+G G   GGGY   GGG
Sbjct: 121 GYGAGVGGAGGYGSGG--GGGGGQGGGAG-GYGQGSGYGSGYGSGAGGAHGGGYGSGGGG 180

Query: 181 EGVGSHGGGSGVGSGGGYGGGAAHGGGY 204
            G G  GGGSG GSG GYG G+  G G+
Sbjct: 181 GGGGGQGGGSGSGSGSGYGSGSGGGNGH 184

[Close]
BLAST of Lag0017310 vs. ExPASy TrEMBL
Match: A0A6J1E9N8 (glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431141 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 7.4e-44
Identity = 163/271 (60.15%), Postives = 176/271 (64.94%), Query Frame = 0 

Query: 1   MAITRVLCLGFLLLVGLGLASAARTLLDYDPRTRHYDYDRPNPRVGYDPDHRDESYDNVY 60
           MAITRVLCL FLLLVGLGLASAARTLLDYDPRTRHY YDRPNPR GYD  HRDESYDN Y
Sbjct: 1   MAITRVLCLSFLLLVGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAY 60

Query: 61  GGRVGG------SALGGSGYGSGG-------------------------GGGSGTGYGGG 120
           GGR GG      SALGGSGYGSGG                         G GSG+ YGGG
Sbjct: 61  GGRSGGGYGDGSSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120

Query: 121 AEHGVGYGSGGGGGYGSGGNTGYGPGGDRGVGYGSGEGARSGNGYEGSR-----GYGAGK 180
            +HGVGY  G  GGY +GGN GYG G D  +GYGSG     GNG  G       GYG+  
Sbjct: 121 EDHGVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSGGYENGGNGGYGQGRDHDIGYGSRN 180

Query: 181 GSGSGAGYGSGGARGSGYGNGGGAGGGYGGGEGVGSHGGGSGVGSGGGYGG--------- 221
           G+G+G G G+G     GYGNGGG  GGYG G+GVGSH GGSG+G+GGGYGG         
Sbjct: 181 GNGNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGSHAGGSGIGAGGGYGGHAGGSGIGA 240

[Close]
BLAST of Lag0017310 vs. ExPASy TrEMBL
Match: A0A6J1E6F7 (glycine-rich cell wall structural protein 1.8-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431141 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 4.8e-43
Identity = 161/269 (59.85%), Postives = 176/269 (65.43%), Query Frame = 0 

Query: 1   MAITRVLCLGFLLLVGLGLASAARTLLDYDPRTRHYDYDRPNPRVGYDPDHRDESYDNVY 60
           MAITRVLCL FLLLVGLGLASAARTLLDYDPRTRHY YDRPNPR GYD  HRDESYDN Y
Sbjct: 1   MAITRVLCLSFLLLVGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAY 60

Query: 61  GGRVGG------SALGGSGYGSGG-------------------------GGGSGTGYGGG 120
           GGR GG      SALGGSGYGSGG                         G GSG+ YGGG
Sbjct: 61  GGRSGGGYGDGSSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120

Query: 121 AEHGVGYGSGGGGGYGSGGNTGYGPGGDRGVGYGSGEGARS---GNGYEGSRGYGAGKGS 180
            +HGVGY  G  GGY +GGN GYG G D  +GYGS E   +   G G +   GYG+  G+
Sbjct: 121 EDHGVGYAGGRSGGYENGGNGGYGQGRDHDIGYGSYENGGNGGYGQGRDHDIGYGSRNGN 180

Query: 181 GSGAGYGSGGARGSGYGNGGGAGGGYGGGEGVGSHGGGSGVGSGGGYGG----------- 221
           G+G G G+G     GYGNGGG  GGYG G+GVGSH GGSG+G+GGGYGG           
Sbjct: 181 GNGNGNGNGYGDSHGYGNGGGVDGGYGRGDGVGSHAGGSGIGAGGGYGGHAGGSGIGAGG 240

[Close]
BLAST of Lag0017310 vs. ExPASy TrEMBL
Match: A0A6J1E6B7 (glycine-rich cell wall structural protein 1.8-like OS=Cucurbita moschata OX=3662 GN=LOC111430998 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 5.3e-42
Identity = 159/253 (62.85%), Postives = 170/253 (67.19%), Query Frame = 0 

Query: 1   MAITRVLCLGFLLLVGLGLASAARTLLDYDPRTRHYDYDRPNPRVGYDPDHRDESYDNVY 60
           MAITRVLCL FLLLVGLGLASAARTLLDYDPRTRHY YDRPNPR GYD  HRDESYDN Y
Sbjct: 1   MAITRVLCLSFLLLVGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAY 60

Query: 61  GGRVGG------SALGGSGYGSGG-------------------------GGGSGTGYGGG 120
           GGR GG      SALGGSGYGSGG                         G GSG+ YGGG
Sbjct: 61  GGRSGGGYGDRSSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120

Query: 121 AEHGVGYGSGGGGGYGSGGNTGYGPGGDRGVGYGS--GEGARSGNGYEGSRGYGAGKGSG 180
            +HGVGYG G  GGY +GGN GYG G D  +GYGS  G G  +GNGY  S GYG G G  
Sbjct: 121 EDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGYGNGGGVD 180

Query: 181 SGAGYGSGGARGSGYGNGGGAGGGYGGGEGVGSHGGGSGVGSGGGYGGGAAHGGGYDNNK 221
            G G G G    +G G+G GAGGGYGG      H GGSG+G+GG YG G AHGG +DN+K
Sbjct: 181 GGYGRGDGVGSHAG-GSGIGAGGGYGG------HAGGSGIGAGGAYGSGGAHGGEHDNSK 240

[Close]
BLAST of Lag0017310 vs. ExPASy TrEMBL
Match: A0A6J1L118 (glycine-rich cell wall structural protein 1.8-like OS=Cucurbita maxima OX=3661 GN=LOC111500189 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 6.9e-42
Identity = 159/254 (62.60%), Postives = 169/254 (66.54%), Query Frame = 0 

Query: 1   MAITRVLCLGFLLLVGLGLASAARTLLDYDPRTRHYDYDRPNPRVGYDPDHRDESYDNVY 60
           MAITRVLCL FLLLVGLGLASAARTLLDYDPRTRHY YDRPNPR GYD  HRDESYDN Y
Sbjct: 1   MAITRVLCLTFLLLVGLGLASAARTLLDYDPRTRHYGYDRPNPREGYDSGHRDESYDNAY 60

Query: 61  GGRVG------GSALGGSGYGSGG-------------------------GGGSGTGYGGG 120
           GGR G      GSALGGSGYGSGG                         G GSG+ YGGG
Sbjct: 61  GGRSGGEYGVRGSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120

Query: 121 AEHGVGYGSGGGGGYGSGGNTGYGPGGDRGVGYGS--GEGARSGNGYEGSRGYGAGKGSG 180
            +HGVGYG G  GGY +GGN GYG G D  +GYGS  G G  +GNGY  S GY  G G G
Sbjct: 121 EDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGY--GNGGG 180

Query: 181 SGAGYGSG-GARGSGYGNGGGAGGGYGGGEGVGSHGGGSGVGSGGGYGGGAAHGGGYDNN 221
              GYG G G  G   G+G GAGGGYGG      H GGSG+G+GG YG G  HGG +DN+
Sbjct: 181 VDGGYGRGDGVGGHAGGSGIGAGGGYGG------HAGGSGIGAGGAYGSGGGHGGEHDNS 240

[Close]
BLAST of Lag0017310 vs. ExPASy TrEMBL
Match: A0A6J1L3G2 (glycine-rich cell wall structural protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111500188 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 2.6e-41
Identity = 157/254 (61.81%), Postives = 168/254 (66.14%), Query Frame = 0 

Query: 1   MAITRVLCLGFLLLVGLGLASAARTLLDYDPRTRHYDYDRPNPRVGYDPDHRDESYDNVY 60
           MAITR  CL FLLLVGLGL SAARTLLDYDPRTRHY Y+RPNPR GYD  HRDESYDNVY
Sbjct: 1   MAITRAFCLSFLLLVGLGLTSAARTLLDYDPRTRHYGYNRPNPREGYDSGHRDESYDNVY 60

Query: 61  GGR------VGGSALGGSGYGSGG-------------------------GGGSGTGYGGG 120
           GGR      VGGSALGGSGYGSGG                         G GSG+ YGGG
Sbjct: 61  GGRSGGEYGVGGSALGGSGYGSGGVRGSGYGNGGGNAYGGGVSSGVGGAGYGSGSRYGGG 120

Query: 121 AEHGVGYGSGGGGGYGSGGNTGYGPGGDRGVGYGS--GEGARSGNGYEGSRGYGAGKGSG 180
            +HGVGYG G  GGY +GGN GYG G D  +GYGS  G G  +GNGY  S GY  G G G
Sbjct: 121 EDHGVGYGGGRSGGYENGGNGGYGQGRDHDIGYGSRNGNGNGNGNGYGDSHGY--GNGGG 180

Query: 181 SGAGYGSG-GARGSGYGNGGGAGGGYGGGEGVGSHGGGSGVGSGGGYGGGAAHGGGYDNN 221
              GYG G G  G   G+G GAGGGYGG      H GGSG+G+GG YG G  HGG +DN+
Sbjct: 181 VDGGYGRGDGVGGHAGGSGIGAGGGYGG------HAGGSGIGAGGAYGSGGGHGGEHDNS 240

[Close]
BLAST of Lag0017310 vs. TAIR 10
Match: AT2G36120.1 (Glycine-rich protein family )

HSP 1 Score: 50.4 bits (119), Expect = 2.1e-06
Identity = 107/237 (45.15%), Postives = 118/237 (49.79%), Query Frame = 0 

Query: 14  LVGLGLASAARTLL---DYDPRTRHYDYDR-------------PNPRVGYDPDHRDESYD 73
           L+GLGL SA R LL   + +     Y  +              P    GY     +    
Sbjct: 13  LIGLGLCSARRALLSSSESEAEVAAYGVNSGLSAGLGVGIGGGPGGGSGYGGGSGEGGGA 72

Query: 74  NVYG-GRVGGSALGGSGYGSGGGGGSGT--GYGGGAEH--GVGYGSG-----GGGGYGSG 133
             +G G +GG   GG G G+GGGGG G   GYGGG+    G GYG G     GGGG G  
Sbjct: 73  GGHGEGHIGGGGGGGHGGGAGGGGGGGPGGGYGGGSGEGGGAGYGGGEAGGHGGGGGGGA 132

Query: 134 GNTGYGPGGDRGVGYGSGEGARSGNGYEG------SRGYGAGKGSGSGAGYGSGGARGSG 193
           G  G G GG  G GYG G+GA +G GY G        G G G G G G G G GGA G G
Sbjct: 133 GGGGGGGGGAHGGGYGGGQGAGAGGGYGGGGAGGHGGGGGGGNGGGGGGGSGEGGAHGGG 192

Query: 194 YGNGGGAGGGYGGGEGVGSHGGGSGVGSGGGYGGGAAHGGGYDNNKGSGEEGGYDGG 219
           YG GGGAG GYGGG G G HGGG   G GGG GGG   GGGY    G G  GG  GG
Sbjct: 193 YGAGGGAGEGYGGGAGAGGHGGGG--GGGGGSGGGGGGGGGYAAASGYGHGGGAGGG 247

[Close]
BLAST of Lag0017310 vs. TAIR 10
Match: AT5G46730.1 (glycine-rich protein )

HSP 1 Score: 46.2 bits (108), Expect = 3.9e-05
Identity = 93/178 (52.25%), Postives = 102/178 (57.30%), Query Frame = 0 

Query: 60  YGGRVGGSALGGSGYGSGGGG-------GSGTGYGGGAEHG---VGYGSGGGGGYGSGGN 119
           YGG  G ++ GGSG+G GGGG        SG G GGG  +G    G+  GGGGG G GG 
Sbjct: 73  YGGAEGYASGGGSGHGGGGGGAASSGGYASGAGEGGGGGYGGAAGGHAGGGGGGSGGGGG 132

Query: 120 TGYGPGGDRGVGYGSGEGARSGNGYEGSRG--YGAGKGSGSGAGYGSGGARGSGYGNGGG 179
           + YG GG+   GYG+G G   G G  G  G  YG G G G G G GS G    G G GGG
Sbjct: 133 SAYGAGGEHASGYGNGAGEGGGAGASGYGGGAYGGGGGHGGGGGGGSAGGAHGGSGYGGG 192

Query: 180 AGGGYGGG---EGVGSHGGGSGVGSGGG--YGGGAAHGGGYDNNKGSGEEGGYDGGYA 221
            GGG GGG    G G +GGG G GSGGG  YGGG AHGGGY    G GE GGY GG A
Sbjct: 193 EGGGAGGGGSHGGAGGYGGGGGGGSGGGGAYGGGGAHGGGY--GSGGGEGGGYGGGAA 248

[Close]
BLAST of Lag0017310 vs. TAIR 10
Match: AT3G23450.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; Has 694543 Blast hits to 47111 proteins in 2535 species: Archae - 1794; Bacteria - 163056; Metazoa - 258989; Fungi - 49151; Plants - 70496; Viruses - 8919; Other Eukaryotes - 142138 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 9.7e-04
Identity = 89/174 (51.15%), Postives = 98/174 (56.32%), Query Frame = 0 

Query: 52  RDESYDNVYGGRVGGSALGGSGYGSGG--GGGSGTGYGGGAEHGVGYGSGGGGGYGSGGN 111
           RDE    + GG  GG   GG G G+GG  GGG+G G+GGGA  G G G GGGGG G GG 
Sbjct: 32  RDEDEKTLVGGGKGGGFGGGFGGGAGGGVGGGAGGGFGGGAGGGFGGGGGGGGGGGGGGG 91

Query: 112 TGYGPGGDRGVGYGSGEGARSGNGYEGSRGYGAGKGSGSGAGYGSGGARGSGYGNGGGAG 171
            G+G GG  G G+G G G   G G+ G  G G GKG G G G G GG  G G G GGG G
Sbjct: 92  GGFGGGGGFGGGHGGGVGGGVGGGHGGGVGGGFGKGGGIGGGIGKGGGVGGGIGKGGGIG 151

Query: 172 GGYGGGEGVG-----SHGGGSGVGSGGGYGGGAAHGGGYDNNKGSGEEGGYDGG 219
           GG G G GVG       G G G+G GGG GGG   GGG     G G+ GG  GG
Sbjct: 152 GGIGKGGGVGGGIGKGGGIGGGIGKGGGIGGGIGKGGGIGG--GIGKGGGIGGG 203

The following BLAST results are available for this feature:
BLAST of Lag0017310 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022923448.11.5e-4360.15glycine-rich cell wall structural protein 1.8-like isoform X1 [Cucurbita moschat... [more]
KAG6577709.15.8e-4363.89hypothetical protein SDJN03_25283, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023552983.15.8e-4363.39glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo][more]
XP_022923449.19.9e-4359.85glycine-rich cell wall structural protein 1.8-like isoform X2 [Cucurbita moschat... [more]
XP_023552981.19.9e-4363.39glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo][more]
BLAST of Lag0017310 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P104962.2e-0846.89Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2... [more]
P104952.0e-0646.06Glycine-rich cell wall structural protein 1.0 OS=Phaseolus vulgaris OX=3885 PE=2... [more]
Q9SIH22.9e-0545.15Glycine-rich protein DOT1 OS=Arabidopsis thaliana OX=3702 GN=DOT1 PE=2 SV=1[more]
P0C5C75.0e-0546.63Glycine-rich cell wall structural protein 2 OS=Oryza sativa subsp. indica OX=399... [more]
A3C5A75.0e-0546.63Glycine-rich cell wall structural protein 2 OS=Oryza sativa subsp. japonica OX=3... [more]
BLAST of Lag0017310 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1E9N87.4e-4460.15glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Cucurbita mosch... [more]
A0A6J1E6F74.8e-4359.85glycine-rich cell wall structural protein 1.8-like isoform X2 OS=Cucurbita mosch... [more]
A0A6J1E6B75.3e-4262.85glycine-rich cell wall structural protein 1.8-like OS=Cucurbita moschata OX=3662... [more]
A0A6J1L1186.9e-4262.60glycine-rich cell wall structural protein 1.8-like OS=Cucurbita maxima OX=3661 G... [more]
A0A6J1L3G22.6e-4161.81glycine-rich cell wall structural protein 2-like OS=Cucurbita maxima OX=3661 GN=... [more]
BLAST of Lag0017310 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G36120.12.1e-0645.15Glycine-rich protein family [more]
AT5G46730.13.9e-0552.25glycine-rich protein [more]
AT3G23450.19.7e-0451.15unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01228EGGSHELLcoord: 135..145
score: 47.73
coord: 108..123
score: 39.84
coord: 4..20
score: 35.29
coord: 159..177
score: 40.13
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..221

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0017310.1Lag0017310.1mRNA