Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGCTCTGCTCGAAATTTTCTCAGCTATACCAGTCGTTATACCATCTGGATCTTGTTGATGTCATCTGGGCATTGAGGGAGAAGTTGGGCGCATTAGACTTTGAGCTTGTGACAGTGTTCTGGTGGTCAGTTTGGAATTTACGTAACAGTTTGTGTTGGAGGGGAGAATCTGATGGTCGGGATTTGTGGGCATGGTCTGAAGAGTATCTGAGGGCGTACCATGATGTTGTCGGGCAGCGGGAGTCTCGCTGCAGTTTGCAGCCTTGCCCCAGTCGGCCAGTCGAGCAGTCTTCATGGACTCCCCCGATGGGCGGTGGTTTCAAGCTGAACACCGATGCCTCGGTCAGGCCTGATAAGGGTGAAGCGGGGGGAGGTTGTGTTCTTCGGGATGTGTCTGGTGCAGTGCTTCTAGCGGCATGTTTGGACCTGCCCAGGTGTTGGAGTGTGGATCTGGCTGAAGGTTGGGCACTGGTGAAGGGCGTGGAGTTAGCGTTACAGATGTGTTTCTTAAGTTTCTGTGTCGAAGTGGATTCATTAAGGCTGGTTCGAATTCTACATGGGGAGGTGACTGATTCTTCAGAGGTAGGCCTGTTGATGGGTGATGTCTGACGTCTTCTCCATCCTTGTGTGAGTGGAAAGGTTCTTTTTACACCATGGAACGGGAATAGAGTGACACATGCTCTAGCCTGTTTGTCCTTCTCCTATTCTGATCGTGTTTGGCTGGAGGAGTGGCCTAATGAAATCTCTGCTGTGCTGGCTTGTGATGTCGGGTTGTGTCAGGGAGGACACCCCTAAAGTGGAAAGTGATCAATCTAAGCAGTTTCCAGTCGGCGCTAAACCTCTATGCCTGAAGTCGGGGAAGGCTTTCTGTTTCCCTTTTCCTTGATATTTGGGTGTGCATGTCTGGTTTACTTTGAGGAGTTTTGTATGATGTTAGTTGGGGTTGGTGGTTTGTATGCTAGTGGATCATAGGCTGAAGCTGGTTGCAACTGAACGCCAGTTCTTTCTTTCCTCATTTTTAGTTGTTTGATTGTAGTGCCTGGGTTTGTTTGAGGGGTTGGATGGAGTCAGCTCTTGTGTGTACCTTCCTTCTGGTTGAGGAAGATATGTTGTCCCTGTAACTGGGTTTTCTATGTGCTAATGTTCTTGCAGGTGGCGGTTGAGTTTGGGCAGTTCGAGAACGGGAGCGACCCAAGGAAACATCTGTACTGGAATACGATCAGACTGAGTAGCGACAACCACTACCCAATACCGGCGTGCAGATAG
mRNA sequence
ATGTGGCTCTGCTCGAAATTTTCTCAGCTATACCAGTCGTTATACCATCTGGATCTTGTTGATGTCATCTGGGCATTGAGGGAGAAGTTGGGCGCATTAGACTTTGAGCTTGTGACAGTGTTCTGGTGGTCAGTTTGGAATTTACGTAACAGTTTGTGTTGGAGGGGAGAATCTGATGGTCGGGATTTGTGGGCATGGTCTGAAGAGTATCTGAGGGCGTACCATGATGTTGTCGGGCAGCGGGAGTCTCGCTGCAGTTTGCAGCCTTGCCCCAGTCGGCCAGTCGAGCAGTCTTCATGGACTCCCCCGATGGGCGGTGGTTTCAAGCTGAACACCGATGCCTCGGTCAGGCCTGATAAGGGTGAAGCGGGGGGAGGTTGTGTTCTTCGGGATGTGTCTGGTGCAGTGCTTCTAGCGGCATGTTTGGACCTGCCCAGGTGTTGGAGTGTGGATCTGGCTGAAGGTTGGGCACTGGTGAAGGGCGTGGAGTTAGCGTTACAGATGTGTTTCTTAAGTTTCTGTGTCGAAGTGGATTCATTAAGGCTGGTTCGAATTCTACATGGGGAGGTGACTGATTCTTCAGAGGTGGCGGTTGAGTTTGGGCAGTTCGAGAACGGGAGCGACCCAAGGAAACATCTGTACTGGAATACGATCAGACTGAGTAGCGACAACCACTACCCAATACCGGCGTGCAGATAG
Coding sequence (CDS)
ATGTGGCTCTGCTCGAAATTTTCTCAGCTATACCAGTCGTTATACCATCTGGATCTTGTTGATGTCATCTGGGCATTGAGGGAGAAGTTGGGCGCATTAGACTTTGAGCTTGTGACAGTGTTCTGGTGGTCAGTTTGGAATTTACGTAACAGTTTGTGTTGGAGGGGAGAATCTGATGGTCGGGATTTGTGGGCATGGTCTGAAGAGTATCTGAGGGCGTACCATGATGTTGTCGGGCAGCGGGAGTCTCGCTGCAGTTTGCAGCCTTGCCCCAGTCGGCCAGTCGAGCAGTCTTCATGGACTCCCCCGATGGGCGGTGGTTTCAAGCTGAACACCGATGCCTCGGTCAGGCCTGATAAGGGTGAAGCGGGGGGAGGTTGTGTTCTTCGGGATGTGTCTGGTGCAGTGCTTCTAGCGGCATGTTTGGACCTGCCCAGGTGTTGGAGTGTGGATCTGGCTGAAGGTTGGGCACTGGTGAAGGGCGTGGAGTTAGCGTTACAGATGTGTTTCTTAAGTTTCTGTGTCGAAGTGGATTCATTAAGGCTGGTTCGAATTCTACATGGGGAGGTGACTGATTCTTCAGAGGTGGCGGTTGAGTTTGGGCAGTTCGAGAACGGGAGCGACCCAAGGAAACATCTGTACTGGAATACGATCAGACTGAGTAGCGACAACCACTACCCAATACCGGCGTGCAGATAG
Protein sequence
MWLCSKFSQLYQSLYHLDLVDVIWALREKLGALDFELVTVFWWSVWNLRNSLCWRGESDGRDLWAWSEEYLRAYHDVVGQRESRCSLQPCPSRPVEQSSWTPPMGGGFKLNTDASVRPDKGEAGGGCVLRDVSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMCFLSFCVEVDSLRLVRILHGEVTDSSEVAVEFGQFENGSDPRKHLYWNTIRLSSDNHYPIPACR
Homology
BLAST of Lag0017309 vs. NCBI nr
Match:
XP_022150944.1 (uncharacterized protein LOC111018973 [Momordica charantia])
HSP 1 Score: 109.8 bits (273), Expect = 3.3e-20
Identity = 70/203 (34.48%), Postives = 100/203 (49.26%), Query Frame = 0
Query: 1 MWLCSKFSQLYQSLY---HLDLVDVIWALREKLGALDFELVTVFWWSVWNLRNSLCWRGE 60
+W CSKFS L+ D+ + + + + V W++WN RN
Sbjct: 4 IWQCSKFSHFLHLLWVPVGSDMGHFMRVWTDLVSWQHIGAIVVLLWAIWNARNQTPQHFS 63
Query: 61 SDG--RDLWAWSEEYLRAYHDVVGQRESRCSLQPCPSRPVEQSSWTPPMGGGFKLNTDAS 120
G DL +WSE YL+ Y QR S +L C RP + W PP K+N DA+
Sbjct: 64 LGGSLSDLVSWSENYLQVYQ--AAQRSSXSALVVC--RPPRVAIWRPPAAPLLKVNVDAA 123
Query: 121 VRPDKGEAGGGCVLRDVSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMCFLSFCV 180
R + AG G ++RD +G V L A L R VD EG+A+ +G+ LA++ F+ F +
Sbjct: 124 FRKESFVAGVGVIIRDSTGLVYLTAIRLLARASDVDWVEGFAVYEGILLAVEAGFIRFQI 183
Query: 181 EVDSLRLVRILHGEVTDSSEVAV 199
E DSLR+ +L + D SEV V
Sbjct: 184 ETDSLRIFNLLTTDCVDDSEVGV 202
BLAST of Lag0017309 vs. NCBI nr
Match:
TXG68182.1 (hypothetical protein EZV62_003117 [Acer yangbiense])
HSP 1 Score: 88.2 bits (217), Expect = 1.0e-13
Identity = 48/176 (27.27%), Postives = 89/176 (50.57%), Query Frame = 0
Query: 34 DFELVTVFWWSVWNLRNSLCWRGESDGRD-LWAWSEEYLRAYHDVVGQRESRCSLQPCPS 93
+ L+ +FWW +W LRN+ C + G D L AW E +L A+ D ++ L +
Sbjct: 304 ELALLCIFWWRIWFLRNNNCHGKKGIGDDSLLAWCESFLVAFWDA-----NQVCLNGVSA 363
Query: 94 RPVEQSSWTPPMGGGFKLNTDASVRPDKGEAGGGCVLRDVSGAVLLAACLDLPRCWSVDL 153
W PP+ G K+N DA++ ++G G G V+RD G VL + + +S +
Sbjct: 364 ANPSIVVWKPPVEGTIKINCDAALDMNRGVVGFGLVVRDFGGVVLASCVQHIQVNFSPLI 423
Query: 154 AEGWALVKGVELALQMCFLSFCVEVDSLRLVRILHGEVTDSSEVAVEFGQFENGSD 209
AE +++G+ LA + F ++ D+L +V+++ + +++ + G+ + D
Sbjct: 424 AEAMTILRGINLAFDSNLIPFVIKTDALAVVKLIEAKSPSLADIGLVIGEIVSKLD 474
BLAST of Lag0017309 vs. NCBI nr
Match:
XP_015385025.1 (uncharacterized protein LOC107176703 [Citrus sinensis])
HSP 1 Score: 87.8 bits (216), Expect = 1.3e-13
Identity = 52/197 (26.40%), Postives = 98/197 (49.75%), Query Frame = 0
Query: 1 MWLCSKFSQLYQSLYHLDLVDVIWALREKLGALDFELVTVFWWSVWNLRNSLCWRGES-D 60
+W S + Q + D++ V+ +L +K+ + E V V WW VW+ RN L + G+ +
Sbjct: 9 VWKYSYLASEMQGVVREDILSVMQSLIKKMSMREVEFVAVVWWEVWHARNKLIFEGKRVN 68
Query: 61 GRDLWAWSEEYLRAYHDVVGQRESRCSLQPCPSRPVEQSSWTPPMGGGFKLNTDASVRPD 120
L A ++ + AY V G+ ++ + +Q W PP G +K+N DA+V +
Sbjct: 69 PMSLIAKAQAAVEAYQRVHGKEQTSKRSEDVS----KQDQWCPPPVGFYKVNVDAAVHTE 128
Query: 121 KGEAGGGCVLRDVSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMCFLSFCVEVDS 180
+ G G V+R+ G +++AA +V AE A+ G+E+AL+ + +E D
Sbjct: 129 QQLTGLGVVIRNPQGQIIVAAIKSTKFQDNVTAAEAEAVKWGLEIALEARLAAVIIETDC 188
Query: 181 LRLVRILHGEVTDSSEV 197
+ + + + + + E+
Sbjct: 189 IEVANLANSKTSSKKEI 201
BLAST of Lag0017309 vs. NCBI nr
Match:
XP_024033533.1 (uncharacterized protein LOC112095662 [Citrus clementina])
HSP 1 Score: 87.4 bits (215), Expect = 1.7e-13
Identity = 51/197 (25.89%), Postives = 94/197 (47.72%), Query Frame = 0
Query: 1 MWLCSKFSQLYQSLYHLDLVDVIWALREKLGALDFELVTVFWWSVWNLRNSLCWRGES-D 60
+W C+ QS+ D++ + +L K + + V WW+ W+ RN L + G+ D
Sbjct: 9 IWRCTDLEAAVQSIRRDDMLSTMHSLMRKGAKSEIDYVASIWWATWHARNKLLFEGKKPD 68
Query: 61 GRDLWAWSEEYLRAYHDVVGQRESRCSLQPCPSRPVEQSSWTPPMGGGFKLNTDASVRPD 120
R+ A ++ + AY + + + P + E W PP K+N DA+V +
Sbjct: 69 PRETVAKAKAIVVAYQAMQFKEQD----SPSSIKEKEAQRWNPPPSSKLKINVDAAVHAE 128
Query: 121 KGEAGGGCVLRDVSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMCFLSFCVEVDS 180
AG G V+R+ G V++AA + V + E A+ G+E+A + F + VE D
Sbjct: 129 SQMAGLGAVIRNSQGQVVVAAVKSINFQGDVSIVEAKAVQWGLEVASKASFTNVIVETDC 188
Query: 181 LRLVRILHGEVTDSSEV 197
+ + + +V++ +E+
Sbjct: 189 SMVANLANNKVSNKTEI 201
BLAST of Lag0017309 vs. NCBI nr
Match:
RYE02783.1 (reverse transcriptase-like protein, partial [Rickettsiaceae bacterium])
HSP 1 Score: 87.0 bits (214), Expect = 2.3e-13
Identity = 56/180 (31.11%), Postives = 86/180 (47.78%), Query Frame = 0
Query: 18 DLVDVIWALREKLGALDFELVTVFWWSVWNLRNS-LCWRGESDGRDLWAWSEEYLRAYHD 77
D D I E L EL W +WN RN+ L R L W+ +L Y
Sbjct: 53 DAFDAILRATETLEVRFHELFITIIWELWNHRNNVLAGRSAWSQPQLVQWTVSFLEEY-- 112
Query: 78 VVGQRESRCSLQPCPSRPVEQSSWTPPMGGGFKLNTDASVRPDKGEAGGGCVLRDVSGAV 137
R + P +R WTPP G +N DA++ D+G G GC++RD +G V
Sbjct: 113 ----RAATVGETPTSTRVTTTPRWTPPRDGTLSINVDAALARDRGGFGVGCIVRDHTGEV 172
Query: 138 LLAACLDLPRCWSVDLAEGWALVKGVELALQMCFLSFCVEVDSLRLVRILHGEVTDSSEV 197
+ + L L R +S LAE +A+++G+EL + ++ D L +VR++ VT ++E+
Sbjct: 173 IASQTLFLARGFSPQLAEAYAVLQGIELVRSVGGRRAEIQSDCLGVVRMIDEGVTPATEL 226
BLAST of Lag0017309 vs. ExPASy Swiss-Prot
Match:
P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)
HSP 1 Score: 53.9 bits (128), Expect = 2.8e-06
Identity = 52/178 (29.21%), Postives = 76/178 (42.70%), Query Frame = 0
Query: 26 LREKLGALDFELVTVF----WWSVWNLRNSLCWRGESDGRD----LWAWSEEYLRAY--H 85
L ++ G D T+F WW W R + + RD + W+ E RA+ +
Sbjct: 378 LGDRSGCEDIPWSTIFAVIIWWG-WKWRCGNIFGENTKCRDRVKFVKEWAVEVYRAHSGN 437
Query: 86 DVVGQRESRCSLQPCPSRPVEQSSWTPPMGGGFKLNTDASVRPDKGEAGGGCVLRDVSGA 145
+VG + R W P G K+NTD + R + G A G VLRD +GA
Sbjct: 438 VLVGITQPRVE---------RMIGWVSPCVGWVKVNTDGASRGNPGLASAGGVLRDCTGA 497
Query: 146 VLLAACLDLPRCWSVDLAEGWALVKGVELALQMCFLSFCVEVDSLRLVRILHGEVTDS 194
L++ RC S AE W + G+ A + +EVDS +V L ++DS
Sbjct: 498 WCGGFSLNIGRC-SAPQAELWGVYYGLYFAWEKKVPRVELEVDSEVIVGFLKTGISDS 544
BLAST of Lag0017309 vs. ExPASy TrEMBL
Match:
A0A6J1DBJ7 (uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018973 PE=4 SV=1)
HSP 1 Score: 109.8 bits (273), Expect = 1.6e-20
Identity = 70/203 (34.48%), Postives = 100/203 (49.26%), Query Frame = 0
Query: 1 MWLCSKFSQLYQSLY---HLDLVDVIWALREKLGALDFELVTVFWWSVWNLRNSLCWRGE 60
+W CSKFS L+ D+ + + + + V W++WN RN
Sbjct: 4 IWQCSKFSHFLHLLWVPVGSDMGHFMRVWTDLVSWQHIGAIVVLLWAIWNARNQTPQHFS 63
Query: 61 SDG--RDLWAWSEEYLRAYHDVVGQRESRCSLQPCPSRPVEQSSWTPPMGGGFKLNTDAS 120
G DL +WSE YL+ Y QR S +L C RP + W PP K+N DA+
Sbjct: 64 LGGSLSDLVSWSENYLQVYQ--AAQRSSXSALVVC--RPPRVAIWRPPAAPLLKVNVDAA 123
Query: 121 VRPDKGEAGGGCVLRDVSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMCFLSFCV 180
R + AG G ++RD +G V L A L R VD EG+A+ +G+ LA++ F+ F +
Sbjct: 124 FRKESFVAGVGVIIRDSTGLVYLTAIRLLARASDVDWVEGFAVYEGILLAVEAGFIRFQI 183
Query: 181 EVDSLRLVRILHGEVTDSSEVAV 199
E DSLR+ +L + D SEV V
Sbjct: 184 ETDSLRIFNLLTTDCVDDSEVGV 202
BLAST of Lag0017309 vs. ExPASy TrEMBL
Match:
A0A5C7IHD9 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_003117 PE=4 SV=1)
HSP 1 Score: 88.2 bits (217), Expect = 4.9e-14
Identity = 48/176 (27.27%), Postives = 89/176 (50.57%), Query Frame = 0
Query: 34 DFELVTVFWWSVWNLRNSLCWRGESDGRD-LWAWSEEYLRAYHDVVGQRESRCSLQPCPS 93
+ L+ +FWW +W LRN+ C + G D L AW E +L A+ D ++ L +
Sbjct: 304 ELALLCIFWWRIWFLRNNNCHGKKGIGDDSLLAWCESFLVAFWDA-----NQVCLNGVSA 363
Query: 94 RPVEQSSWTPPMGGGFKLNTDASVRPDKGEAGGGCVLRDVSGAVLLAACLDLPRCWSVDL 153
W PP+ G K+N DA++ ++G G G V+RD G VL + + +S +
Sbjct: 364 ANPSIVVWKPPVEGTIKINCDAALDMNRGVVGFGLVVRDFGGVVLASCVQHIQVNFSPLI 423
Query: 154 AEGWALVKGVELALQMCFLSFCVEVDSLRLVRILHGEVTDSSEVAVEFGQFENGSD 209
AE +++G+ LA + F ++ D+L +V+++ + +++ + G+ + D
Sbjct: 424 AEAMTILRGINLAFDSNLIPFVIKTDALAVVKLIEAKSPSLADIGLVIGEIVSKLD 474
BLAST of Lag0017309 vs. ExPASy TrEMBL
Match:
A0A4Q3DBE2 (Reverse transcriptase-like protein (Fragment) OS=Rickettsiaceae bacterium OX=2023360 GN=EOP33_09975 PE=4 SV=1)
HSP 1 Score: 87.0 bits (214), Expect = 1.1e-13
Identity = 56/180 (31.11%), Postives = 86/180 (47.78%), Query Frame = 0
Query: 18 DLVDVIWALREKLGALDFELVTVFWWSVWNLRNS-LCWRGESDGRDLWAWSEEYLRAYHD 77
D D I E L EL W +WN RN+ L R L W+ +L Y
Sbjct: 53 DAFDAILRATETLEVRFHELFITIIWELWNHRNNVLAGRSAWSQPQLVQWTVSFLEEY-- 112
Query: 78 VVGQRESRCSLQPCPSRPVEQSSWTPPMGGGFKLNTDASVRPDKGEAGGGCVLRDVSGAV 137
R + P +R WTPP G +N DA++ D+G G GC++RD +G V
Sbjct: 113 ----RAATVGETPTSTRVTTTPRWTPPRDGTLSINVDAALARDRGGFGVGCIVRDHTGEV 172
Query: 138 LLAACLDLPRCWSVDLAEGWALVKGVELALQMCFLSFCVEVDSLRLVRILHGEVTDSSEV 197
+ + L L R +S LAE +A+++G+EL + ++ D L +VR++ VT ++E+
Sbjct: 173 IASQTLFLARGFSPQLAEAYAVLQGIELVRSVGGRRAEIQSDCLGVVRMIDEGVTPATEL 226
BLAST of Lag0017309 vs. ExPASy TrEMBL
Match:
A0A7J6GAB1 (RNase H domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_021018 PE=4 SV=1)
HSP 1 Score: 84.0 bits (206), Expect = 9.3e-13
Identity = 58/198 (29.29%), Postives = 92/198 (46.46%), Query Frame = 0
Query: 1 MWLCSKFSQLYQSLYHLDLV--------DVIWALREKLGALDFELVTVFWWSVWNLRNSL 60
+W CSK L++ L L D ++ ++++ F L W +W+ RN
Sbjct: 220 LWYCSKTQALWKHFGFLHLFPPNISMAPDFLFIMKDRCSKDTFILFLGVTWLIWHRRNKS 279
Query: 61 CWRGESDGRDLW-AWSEEYLRAYHDVVGQRESRCSLQPCPSRPVEQSSWTPPMGGGFKLN 120
++ + +W W+ L D Q L PV SW+PP G FK+N
Sbjct: 280 IFQQRNFDNKVWIEWASNLL----DYQLQLVPTPPLHSLKKAPV---SWSPPPSGTFKIN 339
Query: 121 TDASVRPDKGEAGGGCVLRDVSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMCFL 180
TDAS+ + G G V+RD G V++A + +P C SV++AE A+ G+ LA +
Sbjct: 340 TDASLIAGQPGCGLGVVIRDHLGIVVVAETVYIPGCLSVNMAESLAIHSGLLLANRWSLS 399
Query: 181 SFCVEVDSLRLVRILHGE 190
S C+ D ++ L+GE
Sbjct: 400 SICISSDCQPVIHALNGE 410
BLAST of Lag0017309 vs. ExPASy TrEMBL
Match:
A0A803Q8X4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 83.2 bits (204), Expect = 1.6e-12
Identity = 53/198 (26.77%), Postives = 93/198 (46.97%), Query Frame = 0
Query: 1 MWLCSKFSQLYQSLYHLDLV--------DVIWALREKLGALDFELVTVFWWSVWNLRNSL 60
+W C K L++ L L D ++ ++++ F L W +W+ RN
Sbjct: 854 LWYCPKTQDLWKHFGFLHLFLPNIGKAPDFLFIMKDRCSKETFILFLGVTWLIWHRRNKC 913
Query: 61 CWRGESDGRDLW-AWSEEYLRAYHDVVGQRESRCSLQPCPSRPVEQSSWTPPMGGGFKLN 120
++ ++ +W W+ + D Q +S L P PV SW+PP G F +N
Sbjct: 914 IFQQKNFDNKVWIEWASNLI----DFQLQTDSTPPLPPLKKSPV---SWSPPPSGTFMIN 973
Query: 121 TDASVRPDKGEAGGGCVLRDVSGAVLLAACLDLPRCWSVDLAEGWALVKGVELALQMCFL 180
D S+ + G G V+RD GAV++A + +P C S ++AE A+ G++LA +
Sbjct: 974 ADVSLIVGQPGCGLGVVIRDHLGAVVVAETIFIPSCLSFNMAESLAIRSGLKLADRWSLS 1033
Query: 181 SFCVEVDSLRLVRILHGE 190
+ C+ D ++ L+G+
Sbjct: 1034 TICISSDCQSVIHALNGD 1044
BLAST of Lag0017309 vs. TAIR 10
Match:
AT5G42905.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 54.3 bits (129), Expect = 1.5e-07
Identity = 51/160 (31.87%), Postives = 71/160 (44.38%), Query Frame = 0
Query: 40 VFWWSVWNLRNSLCWRGESDGRD----LWAWSEEYLRAY--HDVVGQRESRCSLQPCPSR 99
+ WW W R S + + RD + W E RA+ + +VG S QP R
Sbjct: 84 IIWWG-WKWRCSNIFGENTKCRDRVKFVKEWVVEVYRAHLGNALVG------STQPRVER 143
Query: 100 PVEQSSWTPPMGGGFKLNTDASVRPDKGEAGGGCVLRDVSGAVLLAACLDLPRCWSVDLA 159
+ W P G K+NTD + R + G A G VLRD GA L++ RC S A
Sbjct: 144 LI---GWVLPCVGWVKVNTDGASRGNPGLASAGGVLRDCEGAWCGGFSLNIGRC-SAQHA 203
Query: 160 EGWALVKGVELALQMCFLSFCVEVDSLRLVRILHGEVTDS 194
E W + G+ A + +EVDS +V L ++DS
Sbjct: 204 ELWGVYYGLYFAWEKKVPRVELEVDSEAIVGFLKTGISDS 232
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022150944.1 | 3.3e-20 | 34.48 | uncharacterized protein LOC111018973 [Momordica charantia] | [more] |
TXG68182.1 | 1.0e-13 | 27.27 | hypothetical protein EZV62_003117 [Acer yangbiense] | [more] |
XP_015385025.1 | 1.3e-13 | 26.40 | uncharacterized protein LOC107176703 [Citrus sinensis] | [more] |
XP_024033533.1 | 1.7e-13 | 25.89 | uncharacterized protein LOC112095662 [Citrus clementina] | [more] |
RYE02783.1 | 2.3e-13 | 31.11 | reverse transcriptase-like protein, partial [Rickettsiaceae bacterium] | [more] |
Match Name | E-value | Identity | Description | |
P0C2F6 | 2.8e-06 | 29.21 | Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DBJ7 | 1.6e-20 | 34.48 | uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A5C7IHD9 | 4.9e-14 | 27.27 | RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_003117 ... | [more] |
A0A4Q3DBE2 | 1.1e-13 | 31.11 | Reverse transcriptase-like protein (Fragment) OS=Rickettsiaceae bacterium OX=202... | [more] |
A0A7J6GAB1 | 9.3e-13 | 29.29 | RNase H domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_021018 PE=... | [more] |
A0A803Q8X4 | 1.6e-12 | 26.77 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT5G42905.1 | 1.5e-07 | 31.88 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |