Lag0017295 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0017295
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Imidazole glycerol phosphate synthase hisHF, chloroplastic
Location	chr5: 1881268 .. 1881936 (+)
RNA-Seq Expression	Lag0017295
Synteny	Lag0017295

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTCTATGGCGATGAAGACGACGTATGGAAATGTCCAAAACACCCTTCCAAGCGGCGGAGGATCGGAATCTGTCCTCTCTGCCTCCGTGACCGTCTCGTCACTCTCTGCCCTGACTGCGCCAACGTCCGCCCCTGCAACTGTTGCGCCACCACCACTTCTTCTTCTTCTTCTTCATCCTCCTCTTTCTCTCGTTTCTCCTCCGCCGACCTCGGATCCGTCGGTCGCCTCTCCAACCTGATCGACGGCGAGCCGGCCTTCCGTCGCTCTCGCTCTCTCGCTGCGATTCCGTTTCTCCGATCGAGATCGCGTTTCGTCGCGGAGGCGGACGACTGTTCGTCGTCCGGTAATAGCGCGAGAGCTTCGTCGTTTTGGTCGATTTTTAGGTCGAAGAGTAAGAAGAGGCACGACGGCGGAAGAATCGAGGCTGCGGCGGATGTGGATTTCAGGCGGAGAGCGAAGGAAGTAGCGGAAGTCGAAGAGGCGATGAGACGAACGTTGATGATCCGGTCGAGATCGGTTGCGGTTGCGGATTCCGGCGGGAGATTCGTCCGGCCGCCGGTGAAGGCTAGGGCGTGGTACTTTCCGAGTCCGATCAAAGCTTTCCGGCAATCGAAGATTTCCAAGGCCGTTCTCACGGAACGGTCTCCGTTACACAGAGGTTGA

mRNA sequence

ATGGCGTTCTATGGCGATGAAGACGACGTATGGAAATGTCCAAAACACCCTTCCAAGCGGCGGAGGATCGGAATCTGTCCTCTCTGCCTCCGTGACCGTCTCGTCACTCTCTGCCCTGACTGCGCCAACGTCCGCCCCTGCAACTGTTGCGCCACCACCACTTCTTCTTCTTCTTCTTCATCCTCCTCTTTCTCTCGTTTCTCCTCCGCCGACCTCGGATCCGTCGGTCGCCTCTCCAACCTGATCGACGGCGAGCCGGCCTTCCGTCGCTCTCGCTCTCTCGCTGCGATTCCGTTTCTCCGATCGAGATCGCGTTTCGTCGCGGAGGCGGACGACTGTTCGTCGTCCGGTAATAGCGCGAGAGCTTCGTCGTTTTGGTCGATTTTTAGGTCGAAGAGTAAGAAGAGGCACGACGGCGGAAGAATCGAGGCTGCGGCGGATGTGGATTTCAGGCGGAGAGCGAAGGAAGTAGCGGAAGTCGAAGAGGCGATGAGACGAACGTTGATGATCCGGTCGAGATCGGTTGCGGTTGCGGATTCCGGCGGGAGATTCGTCCGGCCGCCGGTGAAGGCTAGGGCGTGGTACTTTCCGAGTCCGATCAAAGCTTTCCGGCAATCGAAGATTTCCAAGGCCGTTCTCACGGAACGGTCTCCGTTACACAGAGGTTGA

Coding sequence (CDS)

ATGGCGTTCTATGGCGATGAAGACGACGTATGGAAATGTCCAAAACACCCTTCCAAGCGGCGGAGGATCGGAATCTGTCCTCTCTGCCTCCGTGACCGTCTCGTCACTCTCTGCCCTGACTGCGCCAACGTCCGCCCCTGCAACTGTTGCGCCACCACCACTTCTTCTTCTTCTTCTTCATCCTCCTCTTTCTCTCGTTTCTCCTCCGCCGACCTCGGATCCGTCGGTCGCCTCTCCAACCTGATCGACGGCGAGCCGGCCTTCCGTCGCTCTCGCTCTCTCGCTGCGATTCCGTTTCTCCGATCGAGATCGCGTTTCGTCGCGGAGGCGGACGACTGTTCGTCGTCCGGTAATAGCGCGAGAGCTTCGTCGTTTTGGTCGATTTTTAGGTCGAAGAGTAAGAAGAGGCACGACGGCGGAAGAATCGAGGCTGCGGCGGATGTGGATTTCAGGCGGAGAGCGAAGGAAGTAGCGGAAGTCGAAGAGGCGATGAGACGAACGTTGATGATCCGGTCGAGATCGGTTGCGGTTGCGGATTCCGGCGGGAGATTCGTCCGGCCGCCGGTGAAGGCTAGGGCGTGGTACTTTCCGAGTCCGATCAAAGCTTTCCGGCAATCGAAGATTTCCAAGGCCGTTCTCACGGAACGGTCTCCGTTACACAGAGGTTGA

Protein sequence

MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVAEADDCSSSGNSARASSFWSIFRSKSKKRHDGGRIEAAADVDFRRRAKEVAEVEEAMRRTLMIRSRSVAVADSGGRFVRPPVKARAWYFPSPIKAFRQSKISKAVLTERSPLHRG

Homology

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BLAST of Lag0017295 vs. NCBI nr
Match: XP_038905105.1 (uncharacterized protein LOC120091238 [Benincasa hispida])

HSP 1 Score: 399.8 bits (1026), Expect = 1.5e-107
Identity = 207/227 (91.19%), Postives = 214/227 (94.27%), Query Frame = 0


Query: 1   MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCA----TTTSS 60
           MAFYGDEDD+WKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCA    TTTSS
Sbjct: 1   MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSS 60

Query: 61  SSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVAEA-DDCSS 120
           SSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFV +A DDCSS
Sbjct: 61  SSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVDDAVDDCSS 120

Query: 121 SGNSARASSFWSIFRSKSKKRHDGGRIEAAADVDFRRRAKEVAEVEEAMRRTLMIRSRSV 180
           SGNSARASSFWSIFRSKSKK HDGGR EA  ++DFRRRAKEVAE+EEAMRR LMIRSRSV
Sbjct: 121 SGNSARASSFWSIFRSKSKKSHDGGRTEAVVEIDFRRRAKEVAEIEEAMRRKLMIRSRSV 180

Query: 181 AVADSGGRFVRPPVKARAWYFPSPIKAFRQSKISKAVLTERSPLHRG 223
           AVADSGGR VRPPVKA+AWYFPSPIK FRQSKISK+VLTERSPLHRG
Sbjct: 181 AVADSGGRLVRPPVKAKAWYFPSPIKVFRQSKISKSVLTERSPLHRG 227

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BLAST of Lag0017295 vs. NCBI nr
Match: XP_022965250.1 (uncharacterized protein LOC111465171 [Cucurbita maxima])

HSP 1 Score: 392.9 bits (1008), Expect = 1.8e-105
Identity = 206/228 (90.35%), Postives = 216/228 (94.74%), Query Frame = 0


Query: 1   MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCA--TTTSSSS 60
           MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRL++LCPDCANVRPCNCCA  TTTSSSS
Sbjct: 1   MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLISLCPDCANVRPCNCCATTTTTSSSS 60

Query: 61  SSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVAEA-DDCS 120
           SSSSSFSRFSSAD   LGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVA++ DDCS
Sbjct: 61  SSSSSFSRFSSADLASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADSGDDCS 120

Query: 121 SSGNSARASSFWSIFRSKSKKRHDGGRIEAAADVDFRRRAKEVAEVEEAMRRTLMIRSRS 180
           SSGNSARASSFWSIFRSK+KK  DGGRIEAA + DF+RRAKEVAEVEEAMRRTLMIRSRS
Sbjct: 121 SSGNSARASSFWSIFRSKTKKSRDGGRIEAAVEFDFKRRAKEVAEVEEAMRRTLMIRSRS 180

Query: 181 VAVADSGGRFVRPPVKARAWYFPSPIKAFRQSKISKAVLTERSPLHRG 223
           VAV+DS GRFVR PVKA+AWYFPSPIKAFRQSK+SKAVLTERSPLHRG
Sbjct: 181 VAVSDSSGRFVRTPVKAKAWYFPSPIKAFRQSKVSKAVLTERSPLHRG 228

[Close]

BLAST of Lag0017295 vs. NCBI nr
Match: XP_022923201.1 (uncharacterized protein LOC111430968 [Cucurbita moschata] >KAG7015751.1 hypothetical protein SDJN02_23389, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 392.9 bits (1008), Expect = 1.8e-105
Identity = 207/228 (90.79%), Postives = 215/228 (94.30%), Query Frame = 0


Query: 1   MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCA--TTTSSSS 60
           MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCA  TTTSSSS
Sbjct: 1   MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTSSSS 60

Query: 61  SSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVAEA-DDCS 120
           SSSSSFSRFSSAD   LGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVA++ DDCS
Sbjct: 61  SSSSSFSRFSSADLASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADSGDDCS 120

Query: 121 SSGNSARASSFWSIFRSKSKKRHDGGRIEAAADVDFRRRAKEVAEVEEAMRRTLMIRSRS 180
           SSGNSARASSFWSIFRSK+KK  DGGRIEAA + DF+RRAKEVAEVEEAMRRTLMIRSRS
Sbjct: 121 SSGNSARASSFWSIFRSKTKKSRDGGRIEAAVEFDFKRRAKEVAEVEEAMRRTLMIRSRS 180

Query: 181 VAVADSGGRFVRPPVKARAWYFPSPIKAFRQSKISKAVLTERSPLHRG 223
           VAV+DS GRFVR PVKA+AWYFPSPIKAFRQSK+ KAVLTERSPLHRG
Sbjct: 181 VAVSDSSGRFVRTPVKAKAWYFPSPIKAFRQSKVPKAVLTERSPLHRG 228

[Close]

BLAST of Lag0017295 vs. NCBI nr
Match: XP_023552753.1 (uncharacterized protein LOC111810294 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 389.4 bits (999), Expect = 2.0e-104
Identity = 205/228 (89.91%), Postives = 214/228 (93.86%), Query Frame = 0


Query: 1   MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCA--TTTSSSS 60
           MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCA+VRPCNCCA  TTTSSSS
Sbjct: 1   MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCAHVRPCNCCATTTTTSSSS 60

Query: 61  SSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVAEA-DDCS 120
           SSSSSFSRFSSAD   LGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVA++ DDCS
Sbjct: 61  SSSSSFSRFSSADLASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADSGDDCS 120

Query: 121 SSGNSARASSFWSIFRSKSKKRHDGGRIEAAADVDFRRRAKEVAEVEEAMRRTLMIRSRS 180
           SSGNSARASSFWSIFRSK+KK  DGGRIEAA + DF+RRAKEVAEVEEAMRRTLMIRSRS
Sbjct: 121 SSGNSARASSFWSIFRSKTKKSRDGGRIEAAVEFDFKRRAKEVAEVEEAMRRTLMIRSRS 180

Query: 181 VAVADSGGRFVRPPVKARAWYFPSPIKAFRQSKISKAVLTERSPLHRG 223
           VAV+DS GRFVR P KA+AWYFPSPIKAFRQSK+ KAVLTERSPLHRG
Sbjct: 181 VAVSDSSGRFVRTPAKAKAWYFPSPIKAFRQSKVPKAVLTERSPLHRG 228

[Close]

BLAST of Lag0017295 vs. NCBI nr
Match: XP_004148742.1 (uncharacterized protein LOC101206077 [Cucumis sativus] >KGN55746.1 hypothetical protein Csa_009559 [Cucumis sativus])

HSP 1 Score: 389.0 bits (998), Expect = 2.7e-104
Identity = 203/227 (89.43%), Postives = 213/227 (93.83%), Query Frame = 0


Query: 1   MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCA----TTTSS 60
           MAFYGDEDD+WKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCA    TTTSS
Sbjct: 1   MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTNTTTTSS 60

Query: 61  SSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVAEA-DDCSS 120
           SSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFL  RSRFVA++ DDCSS
Sbjct: 61  SSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFL--RSRFVADSGDDCSS 120

Query: 121 SGNSARASSFWSIFRSKSKKRHDGGRIEAAADVDFRRRAKEVAEVEEAMRRTLMIRSRSV 180
           SGNSAR SSFWSIF+SKSKKR+DGGR+EAA ++DFRRRAKEVAEVEEAMRR LMIRSRSV
Sbjct: 121 SGNSARTSSFWSIFKSKSKKRNDGGRMEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSV 180

Query: 181 AVADSGGRFVRPPVKARAWYFPSPIKAFRQSKISKAVLTERSPLHRG 223
           AVADSGGR VRPPVKA+ WYFPSPIKAFRQSK+ K VLTERSPLHRG
Sbjct: 181 AVADSGGRIVRPPVKAKTWYFPSPIKAFRQSKLPKPVLTERSPLHRG 225

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BLAST of Lag0017295 vs. ExPASy TrEMBL
Match: A0A6J1HN71 (uncharacterized protein LOC111465171 OS=Cucurbita maxima OX=3661 GN=LOC111465171 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 8.9e-106
Identity = 206/228 (90.35%), Postives = 216/228 (94.74%), Query Frame = 0


Query: 1   MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCA--TTTSSSS 60
           MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRL++LCPDCANVRPCNCCA  TTTSSSS
Sbjct: 1   MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLISLCPDCANVRPCNCCATTTTTSSSS 60

Query: 61  SSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVAEA-DDCS 120
           SSSSSFSRFSSAD   LGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVA++ DDCS
Sbjct: 61  SSSSSFSRFSSADLASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADSGDDCS 120

Query: 121 SSGNSARASSFWSIFRSKSKKRHDGGRIEAAADVDFRRRAKEVAEVEEAMRRTLMIRSRS 180
           SSGNSARASSFWSIFRSK+KK  DGGRIEAA + DF+RRAKEVAEVEEAMRRTLMIRSRS
Sbjct: 121 SSGNSARASSFWSIFRSKTKKSRDGGRIEAAVEFDFKRRAKEVAEVEEAMRRTLMIRSRS 180

Query: 181 VAVADSGGRFVRPPVKARAWYFPSPIKAFRQSKISKAVLTERSPLHRG 223
           VAV+DS GRFVR PVKA+AWYFPSPIKAFRQSK+SKAVLTERSPLHRG
Sbjct: 181 VAVSDSSGRFVRTPVKAKAWYFPSPIKAFRQSKVSKAVLTERSPLHRG 228

[Close]

BLAST of Lag0017295 vs. ExPASy TrEMBL
Match: A0A6J1E664 (uncharacterized protein LOC111430968 OS=Cucurbita moschata OX=3662 GN=LOC111430968 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 8.9e-106
Identity = 207/228 (90.79%), Postives = 215/228 (94.30%), Query Frame = 0


Query: 1   MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCA--TTTSSSS 60
           MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCA  TTTSSSS
Sbjct: 1   MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTSSSS 60

Query: 61  SSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVAEA-DDCS 120
           SSSSSFSRFSSAD   LGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVA++ DDCS
Sbjct: 61  SSSSSFSRFSSADLASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADSGDDCS 120

Query: 121 SSGNSARASSFWSIFRSKSKKRHDGGRIEAAADVDFRRRAKEVAEVEEAMRRTLMIRSRS 180
           SSGNSARASSFWSIFRSK+KK  DGGRIEAA + DF+RRAKEVAEVEEAMRRTLMIRSRS
Sbjct: 121 SSGNSARASSFWSIFRSKTKKSRDGGRIEAAVEFDFKRRAKEVAEVEEAMRRTLMIRSRS 180

Query: 181 VAVADSGGRFVRPPVKARAWYFPSPIKAFRQSKISKAVLTERSPLHRG 223
           VAV+DS GRFVR PVKA+AWYFPSPIKAFRQSK+ KAVLTERSPLHRG
Sbjct: 181 VAVSDSSGRFVRTPVKAKAWYFPSPIKAFRQSKVPKAVLTERSPLHRG 228

[Close]

BLAST of Lag0017295 vs. ExPASy TrEMBL
Match: A0A0A0L6G5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009520 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.3e-104
Identity = 203/227 (89.43%), Postives = 213/227 (93.83%), Query Frame = 0


Query: 1   MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCA----TTTSS 60
           MAFYGDEDD+WKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCA    TTTSS
Sbjct: 1   MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTNTTTTSS 60

Query: 61  SSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVAEA-DDCSS 120
           SSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFL  RSRFVA++ DDCSS
Sbjct: 61  SSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFL--RSRFVADSGDDCSS 120

Query: 121 SGNSARASSFWSIFRSKSKKRHDGGRIEAAADVDFRRRAKEVAEVEEAMRRTLMIRSRSV 180
           SGNSAR SSFWSIF+SKSKKR+DGGR+EAA ++DFRRRAKEVAEVEEAMRR LMIRSRSV
Sbjct: 121 SGNSARTSSFWSIFKSKSKKRNDGGRMEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSV 180

Query: 181 AVADSGGRFVRPPVKARAWYFPSPIKAFRQSKISKAVLTERSPLHRG 223
           AVADSGGR VRPPVKA+ WYFPSPIKAFRQSK+ K VLTERSPLHRG
Sbjct: 181 AVADSGGRIVRPPVKAKTWYFPSPIKAFRQSKLPKPVLTERSPLHRG 225

[Close]

BLAST of Lag0017295 vs. ExPASy TrEMBL
Match: A0A6J1E8Z1 (suppressor protein SRP40-like OS=Cucurbita moschata OX=3662 GN=LOC111431922 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 7.8e-102
Identity = 199/230 (86.52%), Postives = 211/230 (91.74%), Query Frame = 0


Query: 1   MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCC----ATTTSS 60
           MAFYGDEDDVWKC KHPSKRRRIGICPLCLRDRL+TLCPDCANVRPCNCC     TTTSS
Sbjct: 1   MAFYGDEDDVWKCLKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSS 60

Query: 61  SSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVAEADDC 120
           SSSSSSSFSRFSSAD   LGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSR V++++DC
Sbjct: 61  SSSSSSSFSRFSSADVTSLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDSEDC 120

Query: 121 SSSGNSARASSFWSIFRSKSKKR-HDGGRIEAAADVDFRRRAKEVAEVEEAMRRTLMIRS 180
           SSSGNSARASSFWSIFRS+SK+  HD GR E AA+++FRRR KEVAEVEEAMRRTLMIRS
Sbjct: 121 SSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFRRREKEVAEVEEAMRRTLMIRS 180

Query: 181 RSVAVADSGGRFVRPPVKARAWYFPSPIKAFRQSKISKAVLTERSPLHRG 223
           RSV V+DS GRFVRPPVKA+ WYFPSPIKAFRQSKISKAVLTERSPLHRG
Sbjct: 181 RSVVVSDSSGRFVRPPVKAKTWYFPSPIKAFRQSKISKAVLTERSPLHRG 230

[Close]

BLAST of Lag0017295 vs. ExPASy TrEMBL
Match: A0A6J1KTD6 (vitellogenin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111498490 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.3e-101
Identity = 199/230 (86.52%), Postives = 211/230 (91.74%), Query Frame = 0


Query: 1   MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCC----ATTTSS 60
           MAFYGDED+VWKCPKHPSKRRRIGICPLCLRDRL+TLCPDCANVRPCNCC     TTTSS
Sbjct: 1   MAFYGDEDNVWKCPKHPSKRRRIGICPLCLRDRLLTLCPDCANVRPCNCCVTTTTTTTSS 60

Query: 61  SSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVAEADDC 120
           SSSSSSSFSRFSSAD   LGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSR V+++ DC
Sbjct: 61  SSSSSSSFSRFSSADVASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRLVSDSVDC 120

Query: 121 SSSGNSARASSFWSIFRSKSKKR-HDGGRIEAAADVDFRRRAKEVAEVEEAMRRTLMIRS 180
           SSSGNSARASSFWSIFRS+SK+  HD GR E AA+++F RRAKEVAEVEEAMRRTLMIRS
Sbjct: 121 SSSGNSARASSFWSIFRSRSKRSGHDSGRTETAAEIEFTRRAKEVAEVEEAMRRTLMIRS 180

Query: 181 RSVAVADSGGRFVRPPVKARAWYFPSPIKAFRQSKISKAVLTERSPLHRG 223
           RSV V+DS GRFV+PPVKAR WYFPSPIKAFRQSKISKAVLTERSPLHRG
Sbjct: 181 RSVVVSDSSGRFVQPPVKARTWYFPSPIKAFRQSKISKAVLTERSPLHRG 230

[Close]

BLAST of Lag0017295 vs. TAIR 10
Match: AT1G32690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35200.1); Has 45 Blast hits to 45 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 129.0 bits (323), Expect = 4.6e-30
Identity = 97/234 (41.45%), Postives = 126/234 (53.85%), Query Frame = 0


Query: 6   DEDDVWKCPKHPSKRRRI---GICPLCLRDRLVTLCPDCANVRPCNC----CATTTSSSS 65
           DED   +C KH SKR      G+CP CL +RL +LCPDCA+  PC+C      + + SSS
Sbjct: 2   DEDGFSQCSKHFSKRGYFSGGGVCPFCLHERLSSLCPDCAHDLPCSCSSRAAVSFSPSSS 61

Query: 66  SSSSSFS------RFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVAEADD 125
           SSSSSFS       F+ + +GSVGR+++LI+ EPAFRRS+S+ AIP         +  D 
Sbjct: 62  SSSSSFSIFAGDISFNISGVGSVGRVASLIECEPAFRRSKSM-AIPIKPD-----SVIDS 121

Query: 126 CSSSGNSARASSFWSIFRSKSKKRHDGGRIEAAADVDFRRRAKEVAEVEEAMRRTLMIRS 185
               G S + SSFW IF         G R +                     +  +M +S
Sbjct: 122 GLDHGRSKKTSSFWRIFM--------GNRGDT--------------------KPAIMKKS 181

Query: 186 RSVAVADSGGRFVRPPV----KARAWYFPSPIKAFRQSKISKAVLTERSPLHRG 223
           RSVAVA   G F   PV    K + W FPSPIK FRQS++SK +  +RSPL+RG
Sbjct: 182 RSVAVAGEFG-FSPVPVPATGKGKGWNFPSPIKVFRQSRVSKMIFQQRSPLYRG 200

[Close]

BLAST of Lag0017295 vs. TAIR 10
Match: AT2G35200.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32690.1); Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 111.3 bits (277), Expect = 1.0e-24
Identity = 83/217 (38.25%), Postives = 112/217 (51.61%), Query Frame = 0


Query: 10  VW-KCPKHPSKRRRI-GICPLCLRDRLVTLCPDCANVRPCNCCATTTSSSSSSSSSFSRF 69
           VW KC +H  +   + G+CP CL +RL +LCPDCA+  PC+C    T  +S SS      
Sbjct: 19  VWQKCSRHEGRFVCVAGVCPYCLHERLSSLCPDCAHDLPCSC----TPRASVSSRGEGDV 78

Query: 70  SSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVAEADDCSSSGNSARASSFWS 129
           S A +GSVGR++NLI+ EPAFRRS S+    F  ++   + E +     G   R    W 
Sbjct: 79  SFARIGSVGRVANLIECEPAFRRSTSITGPYFWSAKPEPILETEKDLKPG---RGRWLWR 138

Query: 130 IFRSKSKKRHDGGRIEAAADVDFRRRAKEVAEVEEAMRRTLMIRSRSVAVADSGGRFVRP 189
           +FR     R +  +I+AA                      +M +S SVA       F   
Sbjct: 139 LFRG---NREEETKIKAA---------------------KVMKKSNSVA---GEVLFSPT 198

Query: 190 PV--KARAWYFPSPIKAFRQSKISKAVLTERSPLHRG 223
           PV  K   WYFPSPIK FRQS++SK +  +RSPL+RG
Sbjct: 199 PVTSKGNGWYFPSPIKVFRQSRVSKMIFQQRSPLYRG 201

The following BLAST results are available for this feature:

BLAST of Lag0017295 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905105.1	1.5e-107	91.19	uncharacterized protein LOC120091238 [Benincasa hispida]	[more]
XP_022965250.1	1.8e-105	90.35	uncharacterized protein LOC111465171 [Cucurbita maxima]	[more]
XP_022923201.1	1.8e-105	90.79	uncharacterized protein LOC111430968 [Cucurbita moschata] >KAG7015751.1 hypothet...	[more]
XP_023552753.1	2.0e-104	89.91	uncharacterized protein LOC111810294 [Cucurbita pepo subsp. pepo]	[more]
XP_004148742.1	2.7e-104	89.43	uncharacterized protein LOC101206077 [Cucumis sativus] >KGN55746.1 hypothetical ...	[more]

BLAST of Lag0017295 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0017295 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HN71	8.9e-106	90.35	uncharacterized protein LOC111465171 OS=Cucurbita maxima OX=3661 GN=LOC111465171...	[more]
A0A6J1E664	8.9e-106	90.79	uncharacterized protein LOC111430968 OS=Cucurbita moschata OX=3662 GN=LOC1114309...	[more]
A0A0A0L6G5	1.3e-104	89.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009520 PE=4 SV=1	[more]
A0A6J1E8Z1	7.8e-102	86.52	suppressor protein SRP40-like OS=Cucurbita moschata OX=3662 GN=LOC111431922 PE=4...	[more]
A0A6J1KTD6	1.3e-101	86.52	vitellogenin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111498490 PE=4 SV=1	[more]

BLAST of Lag0017295 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32690.1	4.6e-30	41.45	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G35200.1	1.0e-24	38.25	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34197	OS04G0591300 PROTEIN	coord: 1..222
None	No IPR available	PANTHER	PTHR34197:SF2	OS04G0591300 PROTEIN	coord: 1..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0017295.1	Lag0017295.1	mRNA