
Lag0017280 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCGACAAGCAACCGATTAAGTTAGACGACGAACAAATTGCCGAGTTGAGGGAGATCTTCCGGTCGTTCGATCGGAACAACGACGGGAGTTTGACTCAACTCGAACTCGGATCGCTTTTACGATCACTTGGTTTGAAGCCGAGTCCGGATCAGCTTGAGAATTTGATAATGAAGGCCGATACGAACAGCAATGGATTAGTGGAATTTTCAGAGTTCGTAGCTCTGGTGGAGCCGGAGCTGGTATCGGCGAAGTGCCCTTACACAGAGGATCAATTAAGGCAGTTGTTTAGGATGTTTGATAGAGATGGGAATGGGTTTATCACTGCGGCGGAGTTGGCTCACTCCATGGCCAAACTCGGCCACGCTCTCACGGCGGAGGAGCTCACCGGAATGATCAGGGAAGCTGATACAGATGGTGATGGCAGAATCAATTTTCAAGAGTTCTCTCAGGCTATCACTTCTGCTGCATTTGATAATTCCTGGGCTTGA ATGAGCGACAAGCAACCGATTAAGTTAGACGACGAACAAATTGCCGAGTTGAGGGAGATCTTCCGGTCGTTCGATCGGAACAACGACGGGAGTTTGACTCAACTCGAACTCGGATCGCTTTTACGATCACTTGGTTTGAAGCCGAGTCCGGATCAGCTTGAGAATTTGATAATGAAGGCCGATACGAACAGCAATGGATTAGTGGAATTTTCAGAGTTCGTAGCTCTGGTGGAGCCGGAGCTGGTATCGGCGAAGTGCCCTTACACAGAGGATCAATTAAGGCAGTTGTTTAGGATGTTTGATAGAGATGGGAATGGGTTTATCACTGCGGCGGAGTTGGCTCACTCCATGGCCAAACTCGGCCACGCTCTCACGGCGGAGGAGCTCACCGGAATGATCAGGGAAGCTGATACAGATGGTGATGGCAGAATCAATTTTCAAGAGTTCTCTCAGGCTATCACTTCTGCTGCATTTGATAATTCCTGGGCTTGA ATGAGCGACAAGCAACCGATTAAGTTAGACGACGAACAAATTGCCGAGTTGAGGGAGATCTTCCGGTCGTTCGATCGGAACAACGACGGGAGTTTGACTCAACTCGAACTCGGATCGCTTTTACGATCACTTGGTTTGAAGCCGAGTCCGGATCAGCTTGAGAATTTGATAATGAAGGCCGATACGAACAGCAATGGATTAGTGGAATTTTCAGAGTTCGTAGCTCTGGTGGAGCCGGAGCTGGTATCGGCGAAGTGCCCTTACACAGAGGATCAATTAAGGCAGTTGTTTAGGATGTTTGATAGAGATGGGAATGGGTTTATCACTGCGGCGGAGTTGGCTCACTCCATGGCCAAACTCGGCCACGCTCTCACGGCGGAGGAGCTCACCGGAATGATCAGGGAAGCTGATACAGATGGTGATGGCAGAATCAATTTTCAAGAGTTCTCTCAGGCTATCACTTCTGCTGCATTTGATAATTCCTGGGCTTGA MSDKQPIKLDDEQIAELREIFRSFDRNNDGSLTQLELGSLLRSLGLKPSPDQLENLIMKADTNSNGLVEFSEFVALVEPELVSAKCPYTEDQLRQLFRMFDRDGNGFITAAELAHSMAKLGHALTAEELTGMIREADTDGDGRINFQEFSQAITSAAFDNSWA Homology
BLAST of Lag0017280 vs. NCBI nr
Match: XP_022924802.1 (probable calcium-binding protein CML18 [Cucurbita moschata] >XP_023540544.1 probable calcium-binding protein CML18 [Cucurbita pepo subsp. pepo] >KAG6596722.1 putative calcium-binding protein CML17, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 320.1 bits (819), Expect = 1.1e-83 Identity = 162/163 (99.39%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of Lag0017280 vs. NCBI nr
Match: XP_022145375.1 (probable calcium-binding protein CML18 [Momordica charantia]) HSP 1 Score: 319.3 bits (817), Expect = 1.9e-83 Identity = 161/163 (98.77%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of Lag0017280 vs. NCBI nr
Match: XP_008448654.1 (PREDICTED: probable calcium-binding protein CML18 [Cucumis melo] >XP_038905572.1 probable calcium-binding protein CML18 [Benincasa hispida] >KAA0053024.1 putative calcium-binding protein CML18 [Cucumis melo var. makuwa] >TYK11479.1 putative calcium-binding protein CML18 [Cucumis melo var. makuwa]) HSP 1 Score: 319.3 bits (817), Expect = 1.9e-83 Identity = 161/163 (98.77%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of Lag0017280 vs. NCBI nr
Match: XP_022923350.1 (probable calcium-binding protein CML18 [Cucurbita moschata] >XP_022965322.1 probable calcium-binding protein CML18 [Cucurbita maxima] >XP_022965323.1 probable calcium-binding protein CML18 [Cucurbita maxima] >XP_022965324.1 probable calcium-binding protein CML18 [Cucurbita maxima] >XP_023552506.1 probable calcium-binding protein CML18 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 317.8 bits (813), Expect = 5.5e-83 Identity = 160/163 (98.16%), Postives = 162/163 (99.39%), Query Frame = 0
BLAST of Lag0017280 vs. NCBI nr
Match: XP_023005583.1 (probable calcium-binding protein CML18 [Cucurbita maxima]) HSP 1 Score: 317.0 bits (811), Expect = 9.5e-83 Identity = 161/163 (98.77%), Postives = 162/163 (99.39%), Query Frame = 0
BLAST of Lag0017280 vs. ExPASy Swiss-Prot
Match: Q9M8U1 (Probable calcium-binding protein CML18 OS=Arabidopsis thaliana OX=3702 GN=CML18 PE=1 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 1.1e-68 Identity = 131/157 (83.44%), Postives = 144/157 (91.72%), Query Frame = 0
BLAST of Lag0017280 vs. ExPASy Swiss-Prot
Match: Q9AWK2 (Probable calcium-binding protein CML11 OS=Oryza sativa subsp. japonica OX=39947 GN=CML11 PE=2 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 6.4e-66 Identity = 124/157 (78.98%), Postives = 143/157 (91.08%), Query Frame = 0
BLAST of Lag0017280 vs. ExPASy Swiss-Prot
Match: Q9LQN4 (Probable calcium-binding protein CML17 OS=Arabidopsis thaliana OX=3702 GN=CML17 PE=2 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 7.1e-65 Identity = 129/165 (78.18%), Postives = 141/165 (85.45%), Query Frame = 0
BLAST of Lag0017280 vs. ExPASy Swiss-Prot
Match: Q6L5F4 (Probable calcium-binding protein CML14 OS=Oryza sativa subsp. japonica OX=39947 GN=CML14 PE=2 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 2.1e-40 Identity = 85/154 (55.19%), Postives = 109/154 (70.78%), Query Frame = 0
BLAST of Lag0017280 vs. ExPASy Swiss-Prot
Match: Q9LI84 (Probable calcium-binding protein CML16 OS=Arabidopsis thaliana OX=3702 GN=CML16 PE=2 SV=2) HSP 1 Score: 155.6 bits (392), Expect = 4.8e-37 Identity = 80/148 (54.05%), Postives = 106/148 (71.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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