Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCCATCAGTTGTCATCCTTCAAGAAACAAAAACATCATCTATTGACAGGGGTTTTATCAAATCCATATGGAGCTCTCGCTTTATTGGATGGTCCTCCATTGACGCTATTGGATCATCGGGTGGCATTCTCGTTATGTGGAATGAAATTATCCTTAACATTATCGAGGTGGTTAAAGGTTCTTACTCTCTCACTTTGAATCTATCTTTGGCTGATGGTTATAATTTATGGATTACAGGTGTATATGGTCCCAATTCTTCTTCAGAGAGAAAATGGTTCTGGCAGGAGATGTTTGACCTCTCAAGTTTGTGTGATCCAAACTGGATTTTGGGGGGTGATTTCAACATCACAAGATGGTCTTGGGAAAAATCCAATCAGAGGCTTCCTACCAAAGGCATGAAAAATTTCAACAAATTTATAGATATGGTGGAGCTTCTGGACATCCCGTTACAACATGGTAAATACACATGGACTAGTAGCCGGGCAAATTCCCTCATTGATCGATTCTTGATTACAGACAACTGCACTCAGAAATTCGGTAATGCTATTGTTAATCGCCTCCCTTCATCACTTCTGATCATTTTCCTATCAAGCTTATCCTGGGCAAAGAGAGATGGGGGCCGACATCTTTTAAATTCTCCAATTTCTGGCTACTCATAAATCCTTTGAATAGATGCTTCAGAATTGGTGGAACAATCACCCATTGGAAGGTTGGCCAGGTCACGATTTTATGAAAAAGCTCAAAGCCTTCAAACCTTTTATCAAAGAGTGGAATATCAACACCTTTGGTAATAAGGATTCTGTCAAGCATGATCTAATGAACGAGCTTAATGACATTGATGCCAAGGAAGAGTCGGGTTCATTGGATGATTATACGTCCAAGCGTAGGCTATCCATAAAAGTCGACCTTTTAACCTTGGCAGCCCGAGATGATGCTCTGTGGTGA
mRNA sequence
ATGAATCCATCAGTTGTCATCCTTCAAGAAACAAAAACATCATCTATTGACAGGGGTTTTATCAAATCCATATGGAGCTCTCGCTTTATTGGATGGTCCTCCATTGACGCTATTGGATCATCGGGTGGCATTCTCGTTATGTGGAATGAAATTATCCTTAACATTATCGAGGTGGTTAAAGGTTCTTACTCTCTCACTTTGAATCTATCTTTGGCTGATGGTTATAATTTATGGATTACAGGTGTATATGGTCCCAATTCTTCTTCAGAGAGAAAATGGTTCTGGCAGGAGATGTTTGACCTCTCAAGTTTGTGTGATCCAAACTGGATTTTGGGGGGTGATTTCAACATCACAAGATGGTCTTGGGAAAAATCCAATCAGAGGCTTCCTACCAAAGGCATGAAAAATTTCAACAAATTTATAGATATGGTGGAGCTTCTGGACATCCCGTTACAACATGGTAAATACACATGGACTAGTAGCCGGGCAAATTCCCTCATTGATCGATTCTTGATTACAGACAACTGCACTCAGAAATTCGGTAATGCTATTATGCTTCAGAATTGGTGGAACAATCACCCATTGGAAGGTTGGCCAGGTCACGATTTTATGAAAAAGCTCAAAGCCTTCAAACCTTTTATCAAAGAGTGGAATATCAACACCTTTGGTAATAAGGATTCTGTCAAGCATGATCTAATGAACGAGCTTAATGACATTGATGCCAAGGAAGAGTCGGGTTCATTGGATGATTATACGTCCAAGCGTAGGCTATCCATAAAAGTCGACCTTTTAACCTTGGCAGCCCGAGATGATGCTCTGTGGTGA
Coding sequence (CDS)
ATGAATCCATCAGTTGTCATCCTTCAAGAAACAAAAACATCATCTATTGACAGGGGTTTTATCAAATCCATATGGAGCTCTCGCTTTATTGGATGGTCCTCCATTGACGCTATTGGATCATCGGGTGGCATTCTCGTTATGTGGAATGAAATTATCCTTAACATTATCGAGGTGGTTAAAGGTTCTTACTCTCTCACTTTGAATCTATCTTTGGCTGATGGTTATAATTTATGGATTACAGGTGTATATGGTCCCAATTCTTCTTCAGAGAGAAAATGGTTCTGGCAGGAGATGTTTGACCTCTCAAGTTTGTGTGATCCAAACTGGATTTTGGGGGGTGATTTCAACATCACAAGATGGTCTTGGGAAAAATCCAATCAGAGGCTTCCTACCAAAGGCATGAAAAATTTCAACAAATTTATAGATATGGTGGAGCTTCTGGACATCCCGTTACAACATGGTAAATACACATGGACTAGTAGCCGGGCAAATTCCCTCATTGATCGATTCTTGATTACAGACAACTGCACTCAGAAATTCGGTAATGCTATTATGCTTCAGAATTGGTGGAACAATCACCCATTGGAAGGTTGGCCAGGTCACGATTTTATGAAAAAGCTCAAAGCCTTCAAACCTTTTATCAAAGAGTGGAATATCAACACCTTTGGTAATAAGGATTCTGTCAAGCATGATCTAATGAACGAGCTTAATGACATTGATGCCAAGGAAGAGTCGGGTTCATTGGATGATTATACGTCCAAGCGTAGGCTATCCATAAAAGTCGACCTTTTAACCTTGGCAGCCCGAGATGATGCTCTGTGGTGA
Protein sequence
MNPSVVILQETKTSSIDRGFIKSIWSSRFIGWSSIDAIGSSGGILVMWNEIILNIIEVVKGSYSLTLNLSLADGYNLWITGVYGPNSSSERKWFWQEMFDLSSLCDPNWILGGDFNITRWSWEKSNQRLPTKGMKNFNKFIDMVELLDIPLQHGKYTWTSSRANSLIDRFLITDNCTQKFGNAIMLQNWWNNHPLEGWPGHDFMKKLKAFKPFIKEWNINTFGNKDSVKHDLMNELNDIDAKEESGSLDDYTSKRRLSIKVDLLTLAARDDALW
Homology
BLAST of Lag0017271 vs. NCBI nr
Match:
XP_022158956.1 (uncharacterized protein LOC111025405 [Momordica charantia])
HSP 1 Score: 264.2 bits (674), Expect = 1.2e-66
Identity = 131/316 (41.46%), Postives = 183/316 (57.91%), Query Frame = 0
Query: 1 MNPSVVILQETKTSSIDRGFIKSIWSSRFIGWSSIDAIGSSGGILVMWNEIILNIIEVVK 60
+NP+VVILQETK S +D +KS+WS+ I WS++DA G + GIL++WN+ L E+++
Sbjct: 27 LNPNVVILQETKLSYMDILIVKSLWSAHGINWSALDASGMASGILILWNDPDLKAAEMIE 86
Query: 61 GSYSLTLNLSLADGYNLWITGVYGPNSSSERKWFWQEMFDLSSLCDPNWILGGDFNITRW 120
G +SLT+N L+DG+ W++G+YGP+++ FWQE+ DLS LC+ +WIL GDFN+TRW
Sbjct: 87 GVFSLTINFCLSDGFLFWVSGIYGPSTTEFHYLFWQELLDLSDLCENHWILAGDFNVTRW 146
Query: 121 SWEKSNQRLPTKGMKNFNKFIDMVELLDIPLQHGKYTWTSSRANSLIDRFLITDNCTQKF 180
SWEKSN R TK M FN FI+ L+D+PL +G++TW+ + + SLID FL+T+ C K
Sbjct: 147 SWEKSNGRPLTKSMWLFNSFIEDSSLIDVPLTNGQHTWSRNTSFSLIDCFLLTNGCIDKL 206
Query: 181 GNAI------------------------------------------MLQNWWNNHPLEGW 240
G I L+ WW N PL GW
Sbjct: 207 GMPIAKRMTRTTSDHFPILLDFGQNNWGLTPFRFENMWLSHKTFKPFLETWWGNKPLHGW 266
Query: 241 PGHDFMKKLKAFKPFIKEWNINTFGNKDSVKHDLMNELNDIDAKEESGSLDDYTSKRRLS 275
PGH M KLK+ K IK W F S K DL N +N +D E S + S+ R+
Sbjct: 267 PGHGLMMKLKSLKYAIKLWITEHFRCIHSQKEDLTNLMNSLDDLEGSQPVTPDQSRARIQ 326
BLAST of Lag0017271 vs. NCBI nr
Match:
XP_022145142.1 (uncharacterized protein LOC111014657 [Momordica charantia])
HSP 1 Score: 199.9 bits (507), Expect = 2.8e-47
Identity = 109/292 (37.33%), Postives = 161/292 (55.14%), Query Frame = 0
Query: 3 PSVVILQETKTSSIDRGFIKSIWSSRFIGWSSIDAIGSSGGILVMWNEIILNIIEVVKGS 62
P +VIL ETK+SSI+ FIKS+WSS I W+S+DA G+SGGI+++W+++ + +EV+ G
Sbjct: 29 PDIVILSETKSSSINNKFIKSLWSSISIAWASLDASGASGGIILLWDQLSTSAVEVICGH 88
Query: 63 YSLTLNLSLADGYNLWITGVYGPNSSSERKWFWQEMFDLSSLCDPNWILGGDFNITRWSW 122
+S++++ LAD + W+TGVY P +RK FWQE+FDL+ LC P W+LG DFNI RWS
Sbjct: 89 FSISVHFKLADNFTWWLTGVYSPVKQKKRKLFWQELFDLNGLCGPIWLLGEDFNIYRWSH 148
Query: 123 EKSNQRLPTKGMKNFNKFIDMVELLDIPLQHGKYTWTSSRAN---SLIDRFLITDNCTQK 182
E S+ P GM FN FID L+D + +G+YTW++ R + S I+RFL + + K
Sbjct: 149 ETSSANPPQTGMNKFNHFIDFAGLIDPFMNNGQYTWSNLRPHIVLSRINRFLYSKGWSDK 208
Query: 183 FGN--------------AIML----QNW------------------------WNNHPLEG 242
F + I+L Q W W++ +G
Sbjct: 209 FSHHHIKRLPRACSDHYPILLEPPNQQWGHCPFRLENLWLQDKHFQQHIEAIWSSGSSDG 268
Query: 243 WPGHDFMKKLKAFKPFIKEWNINTFGNKDSVKHDLMNELNDIDAKEESGSLD 250
+ G+ +KKL IK N N K +M ++ ID +EE+G +D
Sbjct: 269 YLGYALIKKLNTLAQDIKRLRKNFGPNIPREKAKIMEKILSIDKQEETGFID 320
BLAST of Lag0017271 vs. NCBI nr
Match:
RVX05281.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])
HSP 1 Score: 198.4 bits (503), Expect = 8.2e-47
Identity = 106/273 (38.83%), Postives = 155/273 (56.78%), Query Frame = 0
Query: 2 NPSVVILQETKTSSIDRGFIKSIWSSRFIGWSSIDAIGSSGGILVMWNEIILNIIEVVKG 61
NP VV++QETK DR F+ S+W+ R W ++ A G+S GIL++W+ IL+ EVV
Sbjct: 28 NPDVVMIQETKKEICDRRFVGSVWTVRNKEWVALPASGASSGILIIWDSKILSREEVVIE 87
Query: 62 SYSLTLNLSLADGYNLWITGVYGPNSSSERKWFWQEMFDLSSLCDPNWILGGDFNITRWS 121
S+S+++ SL LWI+ VYGPNS S RK FW E+FD+ L P W +GGDFN+ R S
Sbjct: 88 SFSVSVKFSLDGCGPLWISVVYGPNSPSLRKDFWVELFDIYGLTYPLWCVGGDFNVIRRS 147
Query: 122 WEKSNQRLPTKGMKNFNKFIDMVELLDIPLQHGKYTWTSSRANSLIDRFLITDNCTQKFG 181
EK T M++F+ FI ELLD PL++ +TW++ + + + R C
Sbjct: 148 SEKMGGSSLTPSMRDFDSFISECELLDPPLRNASFTWSNMQESPVCLRI-----CGYNTN 207
Query: 182 NAIMLQNWWNNHPLEGWPGHDFMKKLKAFKPFIKEWNINTFGNKDSVKHDLMNELNDIDA 241
++WW+ GW GH FM++L+ K +KEWN +FG K ++N+L DA
Sbjct: 208 FKENFRDWWSGFQGNGWEGHKFMRRLQYVKAKLKEWNKFSFGELKEKKKSILNDLAIFDA 267
Query: 242 KEESGSLDDYTSKRRLSIKVDLLTLAARDDALW 275
E+ G L+ +R S K +L L R++ W
Sbjct: 268 IEQEGGLNPDLISQRASRKGELEVLILREEIHW 295
BLAST of Lag0017271 vs. NCBI nr
Match:
RVW94236.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])
HSP 1 Score: 194.9 bits (494), Expect = 9.1e-46
Identity = 110/318 (34.59%), Postives = 165/318 (51.89%), Query Frame = 0
Query: 2 NPSVVILQETKTSSIDRGFIKSIWSSRFIGWSSIDAIGSSGGILVMWNEIILNIIEVVKG 61
NP VV++QETK + DR F+ S+W+ R W ++ A G+SGGIL++W+ L+ EVV G
Sbjct: 424 NPDVVMIQETKKENCDRRFVGSVWTVRNKDWVALPASGASGGILIIWDSKNLSREEVVIG 483
Query: 62 SYSLTLNLSLADGYNLWITGVYGPNSSSERKWFWQEMFDLSSLCDPNWILGGDFNITRWS 121
S+S+++ SL LWI+ VYGPNS S RK FW E+FD+ L P W +GGDFN+ R S
Sbjct: 484 SFSVSVKFSLDGCGPLWISAVYGPNSPSLRKDFWVELFDIYGLTYPLWCVGGDFNVIRRS 543
Query: 122 WEKSNQRLPTKGMKNFNKFIDMVELLDIPLQHGKYTWTSSRANSL---IDRFLITDNCTQ 181
EK T M++F+ FI ELLD PL++ +TW++ + + + +DRFL ++
Sbjct: 544 SEKMGGSSLTPSMRDFDSFIRECELLDPPLRNASFTWSNMQESPVCKRLDRFLYSNEWGL 603
Query: 182 KFGNAIM------------------------------------------LQNWWNNHPLE 241
F + ++WW+
Sbjct: 604 LFPQGLQEALIRRTSDHWPIVMDTNPFMWGPTPFRFENMWLQHTNFKENFRDWWSGFQGN 663
Query: 242 GWPGHDFMKKLKAFKPFIKEWNINTFGNKDSVKHDLMNELNDIDAKEESGSLDDYTSKRR 275
GW GH FM++L+ K +KEWN +FG K ++N+L + DA E+ G L+ +R
Sbjct: 664 GWEGHKFMRRLQYVKAKLKEWNKFSFGELKEKKKSILNDLANFDAIEQEGGLNPDLLSQR 723
BLAST of Lag0017271 vs. NCBI nr
Match:
CAN78049.1 (hypothetical protein VITISV_015861 [Vitis vinifera])
HSP 1 Score: 194.9 bits (494), Expect = 9.1e-46
Identity = 105/278 (37.77%), Postives = 157/278 (56.47%), Query Frame = 0
Query: 2 NPSVVILQETKTSSIDRGFIKSIWSSRFIGWSSIDAIGSSGGILVMWNEIILNIIEVVKG 61
NP VV+LQETK DR + S+W + + W ++ A +SGGI+++W+ I E V G
Sbjct: 731 NPDVVMLQETKREIWDRRSVSSVWKGKSLDWVALPACEASGGIVILWDSIKFKCSEKVLG 790
Query: 62 SYSLTLNLSLADGYNLWITGVYGPNSSSERKWFWQEMFDLSSLCDPNWILGGDFNITRWS 121
S+S+T+ L+ + W+T VYGPN + RK FW E+ DL L P W +GGDFN+ R
Sbjct: 791 SFSVTVKLNSDEEEFFWLTSVYGPNKAVWRKDFWMELQDLHGLTFPRWCVGGDFNVIRRI 850
Query: 122 WEKSNQRLPTKGMKNFNKFIDMVELLDIPLQHGKYTWTSSRANSLIDRF----LITDNCT 181
EK T M+ F++FI LLD PL++ +TW++ + + + RF L+
Sbjct: 851 SEKMGDSRLTVNMRCFDEFIRESGLLDPPLRNAAFTWSNMQVDPICKRFENMWLLHPEFK 910
Query: 182 QKFGNAIMLQNWWNNHPLEGWPGHDFMKKLKAFKPFIKEWNINTFGNKDSVKHDLMNELN 241
+KF ++WW +EGW GH FM+KLK K +KEWNI FG+ K ++ +L
Sbjct: 911 EKF------RDWWQECTVEGWEGHKFMRKLKFIKSKLKEWNIVVFGDLRERKKHILXDLG 970
Query: 242 DIDAKEESGSLD-DYTSKRRLSIKVDLLTLAARDDALW 275
ID E+ G+L+ D S+R L K +L L +++ W
Sbjct: 971 RIDRIEQEGNLNLDLVSERTLRRK-ELEDLLLKEEVQW 1001
BLAST of Lag0017271 vs. ExPASy TrEMBL
Match:
A0A6J1E2G6 (uncharacterized protein LOC111025405 OS=Momordica charantia OX=3673 GN=LOC111025405 PE=4 SV=1)
HSP 1 Score: 264.2 bits (674), Expect = 5.9e-67
Identity = 131/316 (41.46%), Postives = 183/316 (57.91%), Query Frame = 0
Query: 1 MNPSVVILQETKTSSIDRGFIKSIWSSRFIGWSSIDAIGSSGGILVMWNEIILNIIEVVK 60
+NP+VVILQETK S +D +KS+WS+ I WS++DA G + GIL++WN+ L E+++
Sbjct: 27 LNPNVVILQETKLSYMDILIVKSLWSAHGINWSALDASGMASGILILWNDPDLKAAEMIE 86
Query: 61 GSYSLTLNLSLADGYNLWITGVYGPNSSSERKWFWQEMFDLSSLCDPNWILGGDFNITRW 120
G +SLT+N L+DG+ W++G+YGP+++ FWQE+ DLS LC+ +WIL GDFN+TRW
Sbjct: 87 GVFSLTINFCLSDGFLFWVSGIYGPSTTEFHYLFWQELLDLSDLCENHWILAGDFNVTRW 146
Query: 121 SWEKSNQRLPTKGMKNFNKFIDMVELLDIPLQHGKYTWTSSRANSLIDRFLITDNCTQKF 180
SWEKSN R TK M FN FI+ L+D+PL +G++TW+ + + SLID FL+T+ C K
Sbjct: 147 SWEKSNGRPLTKSMWLFNSFIEDSSLIDVPLTNGQHTWSRNTSFSLIDCFLLTNGCIDKL 206
Query: 181 GNAI------------------------------------------MLQNWWNNHPLEGW 240
G I L+ WW N PL GW
Sbjct: 207 GMPIAKRMTRTTSDHFPILLDFGQNNWGLTPFRFENMWLSHKTFKPFLETWWGNKPLHGW 266
Query: 241 PGHDFMKKLKAFKPFIKEWNINTFGNKDSVKHDLMNELNDIDAKEESGSLDDYTSKRRLS 275
PGH M KLK+ K IK W F S K DL N +N +D E S + S+ R+
Sbjct: 267 PGHGLMMKLKSLKYAIKLWITEHFRCIHSQKEDLTNLMNSLDDLEGSQPVTPDQSRARIQ 326
BLAST of Lag0017271 vs. ExPASy TrEMBL
Match:
A0A6J1CVN2 (uncharacterized protein LOC111014657 OS=Momordica charantia OX=3673 GN=LOC111014657 PE=4 SV=1)
HSP 1 Score: 199.9 bits (507), Expect = 1.4e-47
Identity = 109/292 (37.33%), Postives = 161/292 (55.14%), Query Frame = 0
Query: 3 PSVVILQETKTSSIDRGFIKSIWSSRFIGWSSIDAIGSSGGILVMWNEIILNIIEVVKGS 62
P +VIL ETK+SSI+ FIKS+WSS I W+S+DA G+SGGI+++W+++ + +EV+ G
Sbjct: 29 PDIVILSETKSSSINNKFIKSLWSSISIAWASLDASGASGGIILLWDQLSTSAVEVICGH 88
Query: 63 YSLTLNLSLADGYNLWITGVYGPNSSSERKWFWQEMFDLSSLCDPNWILGGDFNITRWSW 122
+S++++ LAD + W+TGVY P +RK FWQE+FDL+ LC P W+LG DFNI RWS
Sbjct: 89 FSISVHFKLADNFTWWLTGVYSPVKQKKRKLFWQELFDLNGLCGPIWLLGEDFNIYRWSH 148
Query: 123 EKSNQRLPTKGMKNFNKFIDMVELLDIPLQHGKYTWTSSRAN---SLIDRFLITDNCTQK 182
E S+ P GM FN FID L+D + +G+YTW++ R + S I+RFL + + K
Sbjct: 149 ETSSANPPQTGMNKFNHFIDFAGLIDPFMNNGQYTWSNLRPHIVLSRINRFLYSKGWSDK 208
Query: 183 FGN--------------AIML----QNW------------------------WNNHPLEG 242
F + I+L Q W W++ +G
Sbjct: 209 FSHHHIKRLPRACSDHYPILLEPPNQQWGHCPFRLENLWLQDKHFQQHIEAIWSSGSSDG 268
Query: 243 WPGHDFMKKLKAFKPFIKEWNINTFGNKDSVKHDLMNELNDIDAKEESGSLD 250
+ G+ +KKL IK N N K +M ++ ID +EE+G +D
Sbjct: 269 YLGYALIKKLNTLAQDIKRLRKNFGPNIPREKAKIMEKILSIDKQEETGFID 320
BLAST of Lag0017271 vs. ExPASy TrEMBL
Match:
A0A438J8L0 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_173 PE=4 SV=1)
HSP 1 Score: 198.4 bits (503), Expect = 4.0e-47
Identity = 106/273 (38.83%), Postives = 155/273 (56.78%), Query Frame = 0
Query: 2 NPSVVILQETKTSSIDRGFIKSIWSSRFIGWSSIDAIGSSGGILVMWNEIILNIIEVVKG 61
NP VV++QETK DR F+ S+W+ R W ++ A G+S GIL++W+ IL+ EVV
Sbjct: 28 NPDVVMIQETKKEICDRRFVGSVWTVRNKEWVALPASGASSGILIIWDSKILSREEVVIE 87
Query: 62 SYSLTLNLSLADGYNLWITGVYGPNSSSERKWFWQEMFDLSSLCDPNWILGGDFNITRWS 121
S+S+++ SL LWI+ VYGPNS S RK FW E+FD+ L P W +GGDFN+ R S
Sbjct: 88 SFSVSVKFSLDGCGPLWISVVYGPNSPSLRKDFWVELFDIYGLTYPLWCVGGDFNVIRRS 147
Query: 122 WEKSNQRLPTKGMKNFNKFIDMVELLDIPLQHGKYTWTSSRANSLIDRFLITDNCTQKFG 181
EK T M++F+ FI ELLD PL++ +TW++ + + + R C
Sbjct: 148 SEKMGGSSLTPSMRDFDSFISECELLDPPLRNASFTWSNMQESPVCLRI-----CGYNTN 207
Query: 182 NAIMLQNWWNNHPLEGWPGHDFMKKLKAFKPFIKEWNINTFGNKDSVKHDLMNELNDIDA 241
++WW+ GW GH FM++L+ K +KEWN +FG K ++N+L DA
Sbjct: 208 FKENFRDWWSGFQGNGWEGHKFMRRLQYVKAKLKEWNKFSFGELKEKKKSILNDLAIFDA 267
Query: 242 KEESGSLDDYTSKRRLSIKVDLLTLAARDDALW 275
E+ G L+ +R S K +L L R++ W
Sbjct: 268 IEQEGGLNPDLISQRASRKGELEVLILREEIHW 295
BLAST of Lag0017271 vs. ExPASy TrEMBL
Match:
A5ALP8 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_015861 PE=4 SV=1)
HSP 1 Score: 194.9 bits (494), Expect = 4.4e-46
Identity = 105/278 (37.77%), Postives = 157/278 (56.47%), Query Frame = 0
Query: 2 NPSVVILQETKTSSIDRGFIKSIWSSRFIGWSSIDAIGSSGGILVMWNEIILNIIEVVKG 61
NP VV+LQETK DR + S+W + + W ++ A +SGGI+++W+ I E V G
Sbjct: 731 NPDVVMLQETKREIWDRRSVSSVWKGKSLDWVALPACEASGGIVILWDSIKFKCSEKVLG 790
Query: 62 SYSLTLNLSLADGYNLWITGVYGPNSSSERKWFWQEMFDLSSLCDPNWILGGDFNITRWS 121
S+S+T+ L+ + W+T VYGPN + RK FW E+ DL L P W +GGDFN+ R
Sbjct: 791 SFSVTVKLNSDEEEFFWLTSVYGPNKAVWRKDFWMELQDLHGLTFPRWCVGGDFNVIRRI 850
Query: 122 WEKSNQRLPTKGMKNFNKFIDMVELLDIPLQHGKYTWTSSRANSLIDRF----LITDNCT 181
EK T M+ F++FI LLD PL++ +TW++ + + + RF L+
Sbjct: 851 SEKMGDSRLTVNMRCFDEFIRESGLLDPPLRNAAFTWSNMQVDPICKRFENMWLLHPEFK 910
Query: 182 QKFGNAIMLQNWWNNHPLEGWPGHDFMKKLKAFKPFIKEWNINTFGNKDSVKHDLMNELN 241
+KF ++WW +EGW GH FM+KLK K +KEWNI FG+ K ++ +L
Sbjct: 911 EKF------RDWWQECTVEGWEGHKFMRKLKFIKSKLKEWNIVVFGDLRERKKHILXDLG 970
Query: 242 DIDAKEESGSLD-DYTSKRRLSIKVDLLTLAARDDALW 275
ID E+ G+L+ D S+R L K +L L +++ W
Sbjct: 971 RIDRIEQEGNLNLDLVSERTLRRK-ELEDLLLKEEVQW 1001
BLAST of Lag0017271 vs. ExPASy TrEMBL
Match:
A0A438IBZ1 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF2_158 PE=4 SV=1)
HSP 1 Score: 194.9 bits (494), Expect = 4.4e-46
Identity = 110/318 (34.59%), Postives = 165/318 (51.89%), Query Frame = 0
Query: 2 NPSVVILQETKTSSIDRGFIKSIWSSRFIGWSSIDAIGSSGGILVMWNEIILNIIEVVKG 61
NP VV++QETK + DR F+ S+W+ R W ++ A G+SGGIL++W+ L+ EVV G
Sbjct: 424 NPDVVMIQETKKENCDRRFVGSVWTVRNKDWVALPASGASGGILIIWDSKNLSREEVVIG 483
Query: 62 SYSLTLNLSLADGYNLWITGVYGPNSSSERKWFWQEMFDLSSLCDPNWILGGDFNITRWS 121
S+S+++ SL LWI+ VYGPNS S RK FW E+FD+ L P W +GGDFN+ R S
Sbjct: 484 SFSVSVKFSLDGCGPLWISAVYGPNSPSLRKDFWVELFDIYGLTYPLWCVGGDFNVIRRS 543
Query: 122 WEKSNQRLPTKGMKNFNKFIDMVELLDIPLQHGKYTWTSSRANSL---IDRFLITDNCTQ 181
EK T M++F+ FI ELLD PL++ +TW++ + + + +DRFL ++
Sbjct: 544 SEKMGGSSLTPSMRDFDSFIRECELLDPPLRNASFTWSNMQESPVCKRLDRFLYSNEWGL 603
Query: 182 KFGNAIM------------------------------------------LQNWWNNHPLE 241
F + ++WW+
Sbjct: 604 LFPQGLQEALIRRTSDHWPIVMDTNPFMWGPTPFRFENMWLQHTNFKENFRDWWSGFQGN 663
Query: 242 GWPGHDFMKKLKAFKPFIKEWNINTFGNKDSVKHDLMNELNDIDAKEESGSLDDYTSKRR 275
GW GH FM++L+ K +KEWN +FG K ++N+L + DA E+ G L+ +R
Sbjct: 664 GWEGHKFMRRLQYVKAKLKEWNKFSFGELKEKKKSILNDLANFDAIEQEGGLNPDLLSQR 723
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022158956.1 | 1.2e-66 | 41.46 | uncharacterized protein LOC111025405 [Momordica charantia] | [more] |
XP_022145142.1 | 2.8e-47 | 37.33 | uncharacterized protein LOC111014657 [Momordica charantia] | [more] |
RVX05281.1 | 8.2e-47 | 38.83 | Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera] | [more] |
RVW94236.1 | 9.1e-46 | 34.59 | LINE-1 retrotransposable element ORF2 protein [Vitis vinifera] | [more] |
CAN78049.1 | 9.1e-46 | 37.77 | hypothetical protein VITISV_015861 [Vitis vinifera] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1E2G6 | 5.9e-67 | 41.46 | uncharacterized protein LOC111025405 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A6J1CVN2 | 1.4e-47 | 37.33 | uncharacterized protein LOC111014657 OS=Momordica charantia OX=3673 GN=LOC111014... | [more] |
A0A438J8L0 | 4.0e-47 | 38.83 | Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX... | [more] |
A5ALP8 | 4.4e-46 | 37.77 | Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI... | [more] |
A0A438IBZ1 | 4.4e-46 | 34.59 | LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF... | [more] |
Match Name | E-value | Identity | Description | |