Lag0017244 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0017244
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	protein LOW PSII ACCUMULATION 3, chloroplastic
Location	chr5: 1327657 .. 1331243 (-)
RNA-Seq Expression	Lag0017244
Synteny	Lag0017244

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATTTCTCCACCGCGAATTTCGCCTCTACCTCCACCATTCCGACTGCGATTCTTCCACTTCCATCTCCATGTGTAATCTCTCGAACTTCCTTTCTCGATTTCTATGGCGTTCTCTTGTATTTTACTTCAAAATCCTTTTCCTCAAGTGTTCTTCCTCTGTTTCTATCTCTAGCTTGCGTGTTTCAGGATTTCGCGCCGGAAAATTCATCGGAGTTTCGCTTCTGGTTCAATGCTCGAGTTTGTGGCGCGTAAAAACCTCAGAGTTTCCGCGAACTCGAGTAATCGCGCCTCGACTGATTTGGACGTCCCGTTTCCTCGCGATTATTCTAATCTTCTTGATCAAGTATGGTTTCGATCACTTTTGCAGTCTTTTCTGTTTCTAATTTTTACTTCTTGGAATCGATTTCTCTACGATCACTTCATTGCTGCGTGTGTTTTTTTTTGTGTTATTTTGTTAGTTAGATACTTCAATTAACTTCACTTAGCCTTTCGTTTCATGTTTTCTTTACATTACATTTAGCTTTAATTTGTTACTGTCGTTTTCGGATCTCGTTCGTCAAACAACTTCAGGCGAAAGAAGCAACTGAAGCGGCTTTAAGAGACAACAAGCAGTTGATGGTTAGTTCTGAGCACATTCTAATTTCTTTGGGATGGGAGAAGCATTTATAGATAGATAAATCAATATGAAATTTCTGATCAAAGCAATTCTGCTTTAGGAGATTGAATTTCCAACTGCTGGACTTGAATCAGTTCCAGGTTCTTCCTCTAGTTGATTTGCTGTGATTTTGCTTGTACAATCTCAATTGCTTCCGGCCTCTCTCGTCACTCGTTTTGCCTGTTACAGACCATATAACCTTATGTATCAGGTGATGGCGAAGGAGGAATTGAAATGACTGAGAGTATGCAATTGATTCGCCAATTTTGTGACTGCTTCATAGATCCATTGAAAGCCACTCGGACCAGAGTAGTAATGTCCTATTGCATTATCCTTCAATTCTATTCTTCCACAAAATAAGATGTTTGCGTTCAGATTTTCTGTAGAATTTATCCTTGTTAGTGACTAAAATGCATAGTAGGTGAAATCTTCTTCAGTCTCTTAGATGGTTTTCTCCAAAATTTCATCCGCAACAAGATCATATCATGACCTACTGAAATCATTTCTAAGAACTTCTCTTGTGATTTAAACTATAATTTAGAAAAATCTTCTTCACGTTTTATAACTTTTTCTCCCTTTGAAATATCTGGCATCCTTTTTCTGTCAACAAAATCATGTTTGAATTTGCAATATGCTTGCTGTCTGATGTTCTTTCTCTCCTTTTTGACCATTCTAGACTGTTTGTTATAGTAAAGAGAAACATTATTTGTAGTTCTTTCCAGAGGCCAACGAAGTTAAATTTGCAAGAAACACAGTGTTTGAAGGGGCCTCGTTGAAGTTGGATTATCTAACGAAACCATCATTTTTTGAGGATTTTGGTTTTGTTGAGAAAGTGAAAATGGCCGATCGTGTGAAAGCAGAAGATGAGCTTTTTCTGGTTGCATATCCATATTTCAATGTCAATGGTTAGTGAAACATCATCCATTGTTTATTTTCCTACTAATTATTTGAAAAGCACTTTGCTTTTTGTCGGTTAAATTACAGCTCTCGTCTTATTCCTCATTACAGAAATGCTTGTGGTGGAAGAGCTTTACAAGGAAGCTGTATTAAACACTACACGAAAGCTTATAATATTTAATGGAGAGCTCGACCGCATTAGATCCGGCTGTATCCTTTTATCTTTATCTTTATTTATTTATTATTATTATTATTTTTTTTTTTTTTTTGTGGCTTCCTTTTATCTACTTTTTCTATCATACAACGAAGATTTAGGTTTGGGATCTAACTTTTAAAAGGCTAAAACGTGCTAACTAAAAATATGTTATACTAATTTTATTATTTTTTTTTTTTAAAAAAAAACCCGCAGAAACGTCAAACTACAATTTTAGGCCTGGTTTGATTACCATTTTTTTTTTTTTTTCAAAAATCATGGTTGTTTTTCCACAAATTTCTTACAATAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTAAGGAGATATTGTTCTTAGTCAAATTTCAAAAACAAAAACATGTTTTTGAAAACTACGTTTTTCATTTGTTTTCAAAATTTAACTTAGTTTTTGAAAACATGGGAAAGATGTAGATAACAAAACAAAGAAACTCATAATTGAAAGTAGTGTTTATAAGTTTTCAAAAACCAAAAACCAAAAAAAAAAAAACAAAATGGTTATCAAATGGAGTCCTAGTTTTTTTATGTTTTAATATGTTTTTAAACTTCAAATGTACCTAATACATCTCTAATTTTTTTTATTTTGTATCTAACAAGTTTAGATAATATTTTTCAAAGTAAACATAGCTAAACGGTAATTTTCTCAACCAAGAAAGCAGGAGCACATACCAATTAATTTAGTACTTTCAATTTTGTTCCTTTGAACATGTTAGATATTTTCTTAAAAACTTCATGAATACAAAATTGAAATGGTTTTTTTTTTTTTTTTTTTTGAAACTGAAATGTTAGTATTTTATTAGATGCAAAATTCAATTTTGTATCTAATAAGAGAATGAATCTTTAAAAGAATGTTTTGTATATTAATAATTTATTGAATTCAAAGTTAAAATTTTGAAATTTACTAGATATTTTTAAATTTTAAAAACTTATTACACACATTTAATTAGTACTTTTTTCAAAAGTGCTTTTAATTTTAGTGTCAACTTTTGGTCATGATAAAAGTAATTTAATTATTACACACATTCAATTTTGAGCATGTTTGGTGGGTATGATAAAAGTAATTTTGGTTATATTTGACGAACGTGTCATTCTAAAATCACCCTAAAAACAGAGGCACACAATGCAAAGTGATTTTACTCTACTTTGATAATAGTTAAACTTCTTACTGTTGCATAGTATGGTTAAATCAATTATTTTATGATTAATTTTATATGTATATAGAAATTGAGAAAAAAGAATAGTATAATAGATTTATGATTTTCTATCGTATAAAATAAACATATTATTTTAGTAGTATATCGATAATAGTGAATAATTCAGTTTATTCCAGACAACCATTTGTTTGTTTGTTTTTTTTTTTTATGAAATAATTCCTGACATCCATTTATTATTTTATTATGATTATTATGTTTTTGTTATATGAGTGTGAACCTTAATAGGTTTAGACTATCCGCCATTTTTCTACCCAAAGCTGGCGGCACTTATGAAGACTCTCTTCCCGAAAATGGAGACTGTATATTACATTCACAACTTCAAGGGACAAAAAGGAGGAGTTCTTTTCAGGTTTCCCAGTTGATGATCACTTTAGATCTCTTGCCATTCCAATGCTTCCATAACAATGAACCTTCAATTTTCCTTTTCCTTTTTGTTTTGTTATTTGATTTAGGTGCTACCCAGGTCCTTGGAAAGTCCTTAGAAAAATAAGGAATAACAAATATGTCTGCGTGCATCAGCAAGAAGACATGCCTTCTCTCAGGGAAGTTGCTTTGAACATTCTTCCATCATCTTGA

mRNA sequence

ATGCATTTCTCCACCGCGAATTTCGCCTCTACCTCCACCATTCCGACTGCGATTCTTCCACTTCCATCTCCATGTCTTGCGTGTTTCAGGATTTCGCGCCGGAAAATTCATCGGAGTTTCGCTTCTGGTTCAATGCTCGAGTTTGTGGCGCGTAAAAACCTCAGAGTTTCCGCGAACTCGAGTAATCGCGCCTCGACTGATTTGGACGTCCCGTTTCCTCGCGATTATTCTAATCTTCTTGATCAAGCGAAAGAAGCAACTGAAGCGGCTTTAAGAGACAACAAGCAGTTGATGGAGATTGAATTTCCAACTGCTGGACTTGAATCAGTTCCAGGTGATGGCGAAGGAGGAATTGAAATGACTGAGAGTATGCAATTGATTCGCCAATTTTGTGACTGCTTCATAGATCCATTGAAAGCCACTCGGACCAGAGTATTCTTTCCAGAGGCCAACGAAGTTAAATTTGCAAGAAACACAGTGTTTGAAGGGGCCTCGTTGAAGTTGGATTATCTAACGAAACCATCATTTTTTGAGGATTTTGGTTTTGTTGAGAAAGTGAAAATGGCCGATCGTGTGAAAGCAGAAGATGAGCTTTTTCTGGTTGCATATCCATATTTCAATGTCAATGCTCTCGTCTTATTCCTCATTACAGAAATGCTTGTGGTGGAAGAGCTTTACAAGGAAGCTGTATTAAACACTACACGAAAGCTTATAATATTTAATGGAGAGCTCGACCGCATTAGATCCGGCTGTTTAGACTATCCGCCATTTTTCTACCCAAAGCTGGCGGCACTTATGAAGACTCTCTTCCCGAAAATGGAGACTGTATATTACATTCACAACTTCAAGGGACAAAAAGGAGGAGTTCTTTTCAGGTGCTACCCAGGTCCTTGGAAAGTCCTTAGAAAAATAAGGAATAACAAATATGTCTGCGTGCATCAGCAAGAAGACATGCCTTCTCTCAGGGAAGTTGCTTTGAACATTCTTCCATCATCTTGA

Coding sequence (CDS)

ATGCATTTCTCCACCGCGAATTTCGCCTCTACCTCCACCATTCCGACTGCGATTCTTCCACTTCCATCTCCATGTCTTGCGTGTTTCAGGATTTCGCGCCGGAAAATTCATCGGAGTTTCGCTTCTGGTTCAATGCTCGAGTTTGTGGCGCGTAAAAACCTCAGAGTTTCCGCGAACTCGAGTAATCGCGCCTCGACTGATTTGGACGTCCCGTTTCCTCGCGATTATTCTAATCTTCTTGATCAAGCGAAAGAAGCAACTGAAGCGGCTTTAAGAGACAACAAGCAGTTGATGGAGATTGAATTTCCAACTGCTGGACTTGAATCAGTTCCAGGTGATGGCGAAGGAGGAATTGAAATGACTGAGAGTATGCAATTGATTCGCCAATTTTGTGACTGCTTCATAGATCCATTGAAAGCCACTCGGACCAGAGTATTCTTTCCAGAGGCCAACGAAGTTAAATTTGCAAGAAACACAGTGTTTGAAGGGGCCTCGTTGAAGTTGGATTATCTAACGAAACCATCATTTTTTGAGGATTTTGGTTTTGTTGAGAAAGTGAAAATGGCCGATCGTGTGAAAGCAGAAGATGAGCTTTTTCTGGTTGCATATCCATATTTCAATGTCAATGCTCTCGTCTTATTCCTCATTACAGAAATGCTTGTGGTGGAAGAGCTTTACAAGGAAGCTGTATTAAACACTACACGAAAGCTTATAATATTTAATGGAGAGCTCGACCGCATTAGATCCGGCTGTTTAGACTATCCGCCATTTTTCTACCCAAAGCTGGCGGCACTTATGAAGACTCTCTTCCCGAAAATGGAGACTGTATATTACATTCACAACTTCAAGGGACAAAAAGGAGGAGTTCTTTTCAGGTGCTACCCAGGTCCTTGGAAAGTCCTTAGAAAAATAAGGAATAACAAATATGTCTGCGTGCATCAGCAAGAAGACATGCCTTCTCTCAGGGAAGTTGCTTTGAACATTCTTCCATCATCTTGA

Protein sequence

MHFSTANFASTSTIPTAILPLPSPCLACFRISRRKIHRSFASGSMLEFVARKNLRVSANSSNRASTDLDVPFPRDYSNLLDQAKEATEAALRDNKQLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSFFEDFGFVEKVKMADRVKAEDELFLVAYPYFNVNALVLFLITEMLVVEELYKEAVLNTTRKLIIFNGELDRIRSGCLDYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKIRNNKYVCVHQQEDMPSLREVALNILPSS

Homology

[Close]

BLAST of Lag0017244 vs. NCBI nr
Match: XP_038877166.1 (protein LOW PSII ACCUMULATION 3, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 577.4 bits (1487), Expect = 7.9e-161
Identity = 297/350 (84.86%), Postives = 307/350 (87.71%), Query Frame = 0


Query: 1   MHFSTANFASTSTIPTAILPLPSPCLACFRISRRKIHRSFASGSMLEFVARKNLRVSANS 60
           MHFS ANFAS+S IPTAILPLPSP LACFRIS RK HRSF   S+ EF AR+NLRVSANS
Sbjct: 1   MHFSNANFASSSAIPTAILPLPSPNLACFRISHRKTHRSFLFSSLFEFKARRNLRVSANS 60

Query: 61  SNR----ASTDLDVPFPRDYSNLLDQAKEATEAALRDNKQLMEIEFPTAGLESVPGDGEG 120
           SNR    ASTDLDVPFPRDYS+LL+QAK+ATEAALRDNKQLMEIEFPTAGLESVPGDGEG
Sbjct: 61  SNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGEG 120

Query: 121 GIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSF 180
           G EMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNT FEG S KLDYLTKPSF
Sbjct: 121 GNEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSF 180

Query: 181 FEDFGFVEKVKMADRVKAEDELFLVAYPYFNVNALVLFLITEMLVVEELYKEAVLNTTRK 240
           FEDFGFVEKVKMADRVK EDELFLVAYPYFNVN        EMLVVEELYKEAV NTTRK
Sbjct: 181 FEDFGFVEKVKMADRVKPEDELFLVAYPYFNVN--------EMLVVEELYKEAVQNTTRK 240

Query: 241 LIIFNGELDRIRSGCL--------------DYPPFFYPKLAALMKTLFPKMETVYYIHNF 300
           LIIFNGELDRIRSGC+              DYPPFFYPKLAALMKTLFPKMETVYYIHNF
Sbjct: 241 LIIFNGELDRIRSGCILLSTFLLFNEERVKDYPPFFYPKLAALMKTLFPKMETVYYIHNF 300

Query: 301 KGQKGGVLFRCYPGPWKVLRKIRNNKYVCVHQQEDMPSLREVALNILPSS 333
           KGQKGGVLFRCYPGPWKVLRK+R NK+VCVHQQEDMPSL+EVALNILPSS
Sbjct: 301 KGQKGGVLFRCYPGPWKVLRKVR-NKFVCVHQQEDMPSLKEVALNILPSS 341

[Close]

BLAST of Lag0017244 vs. NCBI nr
Match: XP_038877167.1 (protein LOW PSII ACCUMULATION 3, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 574.7 bits (1480), Expect = 5.1e-160
Identity = 295/336 (87.80%), Postives = 304/336 (90.48%), Query Frame = 0


Query: 1   MHFSTANFASTSTIPTAILPLPSPCLACFRISRRKIHRSFASGSMLEFVARKNLRVSANS 60
           MHFS ANFAS+S IPTAILPLPSP LACFRIS RK HRSF   S+ EF AR+NLRVSANS
Sbjct: 1   MHFSNANFASSSAIPTAILPLPSPNLACFRISHRKTHRSFLFSSLFEFKARRNLRVSANS 60

Query: 61  SNR----ASTDLDVPFPRDYSNLLDQAKEATEAALRDNKQLMEIEFPTAGLESVPGDGEG 120
           SNR    ASTDLDVPFPRDYS+LL+QAK+ATEAALRDNKQLMEIEFPTAGLESVPGDGEG
Sbjct: 61  SNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGEG 120

Query: 121 GIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSF 180
           G EMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNT FEG S KLDYLTKPSF
Sbjct: 121 GNEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSF 180

Query: 181 FEDFGFVEKVKMADRVKAEDELFLVAYPYFNVNALVLFLITEMLVVEELYKEAVLNTTRK 240
           FEDFGFVEKVKMADRVK EDELFLVAYPYFNVN        EMLVVEELYKEAV NTTRK
Sbjct: 181 FEDFGFVEKVKMADRVKPEDELFLVAYPYFNVN--------EMLVVEELYKEAVQNTTRK 240

Query: 241 LIIFNGELDRIRSGCLDYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPG 300
           LIIFNGELDRIRSG   YPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPG
Sbjct: 241 LIIFNGELDRIRSGY--YPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPG 300

Query: 301 PWKVLRKIRNNKYVCVHQQEDMPSLREVALNILPSS 333
           PWKVLRK+R NK+VCVHQQEDMPSL+EVALNILPSS
Sbjct: 301 PWKVLRKVR-NKFVCVHQQEDMPSLKEVALNILPSS 325

[Close]

BLAST of Lag0017244 vs. NCBI nr
Match: XP_022923333.1 (protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita moschata])

HSP 1 Score: 557.8 bits (1436), Expect = 6.5e-155
Identity = 285/336 (84.82%), Postives = 299/336 (88.99%), Query Frame = 0


Query: 1   MHFSTANFASTSTIPTAILPLPSPCLACFRISRRKIHRSFASGSMLEFVARKNLRVSANS 60
           M+FS ANF S+STIP A+LPLPS   ACFR+S RKIHRS  S S+LEF+A +NLRV +NS
Sbjct: 1   MYFSNANFVSSSTIPAAVLPLPSRNYACFRMSHRKIHRSLLSSSVLEFMAGRNLRVLSNS 60

Query: 61  SNR----ASTDLDVPFPRDYSNLLDQAKEATEAALRDNKQLMEIEFPTAGLESVPGDGEG 120
           SNR     STD DVPFPRDY +LLDQAK+ATEAALRDNKQLMEIEFPTAGLESVPGDGEG
Sbjct: 61  SNRESSDTSTDFDVPFPRDYFDLLDQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGEG 120

Query: 121 GIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSF 180
           GIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNT FEGAS KLDYLTKPSF
Sbjct: 121 GIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGASFKLDYLTKPSF 180

Query: 181 FEDFGFVEKVKMADRVKAEDELFLVAYPYFNVNALVLFLITEMLVVEELYKEAVLNTTRK 240
           FEDFGFVEKVKMADRVK EDELFLVAYPYFNVN        EMLVVEELYKEAV NT RK
Sbjct: 181 FEDFGFVEKVKMADRVKPEDELFLVAYPYFNVN--------EMLVVEELYKEAVANTARK 240

Query: 241 LIIFNGELDRIRSGCLDYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPG 300
           LIIFNGELDRIRSG   YPPFFYPKLAAL KTLFPKMETVYYIHNFKGQKGGVLFRCYPG
Sbjct: 241 LIIFNGELDRIRSGY--YPPFFYPKLAALTKTLFPKMETVYYIHNFKGQKGGVLFRCYPG 300

Query: 301 PWKVLRKIRNNKYVCVHQQEDMPSLREVALNILPSS 333
           PWKVLRK+R NK+VCVHQQ+DMPSL+EVALNILPSS
Sbjct: 301 PWKVLRKVR-NKFVCVHQQQDMPSLKEVALNILPSS 325

[Close]

BLAST of Lag0017244 vs. NCBI nr
Match: XP_023553103.1 (protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023553104.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 555.8 bits (1431), Expect = 2.5e-154
Identity = 284/336 (84.52%), Postives = 299/336 (88.99%), Query Frame = 0


Query: 1   MHFSTANFASTSTIPTAILPLPSPCLACFRISRRKIHRSFASGSMLEFVARKNLRVSANS 60
           M+FS ANF S+STIP A+LPLPS   ACFR+S RKIHRS  S S+LEF+A +NLRV +NS
Sbjct: 1   MYFSNANFVSSSTIPAAVLPLPSRNFACFRMSHRKIHRSLLSSSVLEFMAGRNLRVLSNS 60

Query: 61  SNR----ASTDLDVPFPRDYSNLLDQAKEATEAALRDNKQLMEIEFPTAGLESVPGDGEG 120
           SNR     STD DVPFPRDY +LLDQAK+ATEAALRDNKQLMEIEFPTAGLESVPGDGEG
Sbjct: 61  SNRESSDTSTDFDVPFPRDYFDLLDQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGEG 120

Query: 121 GIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSF 180
           GIEMT SMQLIRQFCDCFI+PLKATRTRVFFPEANEVKFARNT FEGAS KLDYLTKPSF
Sbjct: 121 GIEMTGSMQLIRQFCDCFIEPLKATRTRVFFPEANEVKFARNTAFEGASFKLDYLTKPSF 180

Query: 181 FEDFGFVEKVKMADRVKAEDELFLVAYPYFNVNALVLFLITEMLVVEELYKEAVLNTTRK 240
           FEDFGFVEKVKMADRVK EDELFLVAYPYFNVN        EMLVVEELYKEAV NTTRK
Sbjct: 181 FEDFGFVEKVKMADRVKPEDELFLVAYPYFNVN--------EMLVVEELYKEAVANTTRK 240

Query: 241 LIIFNGELDRIRSGCLDYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPG 300
           LIIFNGELDRIRSG   YPPFFYPKLAAL KTLFPKMETVYYIHNFKGQKGGVLFRCYPG
Sbjct: 241 LIIFNGELDRIRSGY--YPPFFYPKLAALTKTLFPKMETVYYIHNFKGQKGGVLFRCYPG 300

Query: 301 PWKVLRKIRNNKYVCVHQQEDMPSLREVALNILPSS 333
           PWKVLRK+R NK+VCVHQQ+DMPSL+EVALNILPSS
Sbjct: 301 PWKVLRKVR-NKFVCVHQQQDMPSLKEVALNILPSS 325

[Close]

BLAST of Lag0017244 vs. NCBI nr
Match: XP_008448609.1 (PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 555.4 bits (1430), Expect = 3.2e-154
Identity = 286/337 (84.87%), Postives = 298/337 (88.43%), Query Frame = 0


Query: 1   MHFSTANFASTSTIPTAILPLPSPCLACFRISRRKIHRSFASGSMLEFVARKNLRV---- 60
           MHFS ANFAS+STI TA+LPL SP LACFRIS RK HRSF S SM EF+ R+NLRV    
Sbjct: 1   MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPS 60

Query: 61  -SANSSNRASTDLDVPFPRDYSNLLDQAKEATEAALRDNKQLMEIEFPTAGLESVPGDGE 120
            S   ++ ASTDLDVPFPRDYS+LL+QAK+ATEAALRDNKQLMEIEFPTAGLESVPGDGE
Sbjct: 61  LSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120

Query: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTVFEGASLKLDYLTKPS 180
           GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNT FEG S KLDYLTKPS
Sbjct: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS 180

Query: 181 FFEDFGFVEKVKMADRVKAEDELFLVAYPYFNVNALVLFLITEMLVVEELYKEAVLNTTR 240
           FFEDFGFVEKVKMADRVK EDELFLVAYPYFNVN        EMLVVEELYKEAV NTTR
Sbjct: 181 FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVN--------EMLVVEELYKEAVQNTTR 240

Query: 241 KLIIFNGELDRIRSGCLDYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYP 300
           KLIIFNGELDRIRSG   YPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFR YP
Sbjct: 241 KLIIFNGELDRIRSGY--YPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYP 300

Query: 301 GPWKVLRKIRNNKYVCVHQQEDMPSLREVALNILPSS 333
           GPWKVLRK+R NK  CVHQQE+MPSL+EVALNILPSS
Sbjct: 301 GPWKVLRKVR-NKLACVHQQEEMPSLKEVALNILPSS 326

[Close]

BLAST of Lag0017244 vs. ExPASy TrEMBL
Match: A0A6J1E988 (protein LOW PSII ACCUMULATION 3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111431057 PE=4 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 3.1e-155
Identity = 285/336 (84.82%), Postives = 299/336 (88.99%), Query Frame = 0


Query: 1   MHFSTANFASTSTIPTAILPLPSPCLACFRISRRKIHRSFASGSMLEFVARKNLRVSANS 60
           M+FS ANF S+STIP A+LPLPS   ACFR+S RKIHRS  S S+LEF+A +NLRV +NS
Sbjct: 1   MYFSNANFVSSSTIPAAVLPLPSRNYACFRMSHRKIHRSLLSSSVLEFMAGRNLRVLSNS 60

Query: 61  SNR----ASTDLDVPFPRDYSNLLDQAKEATEAALRDNKQLMEIEFPTAGLESVPGDGEG 120
           SNR     STD DVPFPRDY +LLDQAK+ATEAALRDNKQLMEIEFPTAGLESVPGDGEG
Sbjct: 61  SNRESSDTSTDFDVPFPRDYFDLLDQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGEG 120

Query: 121 GIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSF 180
           GIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNT FEGAS KLDYLTKPSF
Sbjct: 121 GIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGASFKLDYLTKPSF 180

Query: 181 FEDFGFVEKVKMADRVKAEDELFLVAYPYFNVNALVLFLITEMLVVEELYKEAVLNTTRK 240
           FEDFGFVEKVKMADRVK EDELFLVAYPYFNVN        EMLVVEELYKEAV NT RK
Sbjct: 181 FEDFGFVEKVKMADRVKPEDELFLVAYPYFNVN--------EMLVVEELYKEAVANTARK 240

Query: 241 LIIFNGELDRIRSGCLDYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPG 300
           LIIFNGELDRIRSG   YPPFFYPKLAAL KTLFPKMETVYYIHNFKGQKGGVLFRCYPG
Sbjct: 241 LIIFNGELDRIRSGY--YPPFFYPKLAALTKTLFPKMETVYYIHNFKGQKGGVLFRCYPG 300

Query: 301 PWKVLRKIRNNKYVCVHQQEDMPSLREVALNILPSS 333
           PWKVLRK+R NK+VCVHQQ+DMPSL+EVALNILPSS
Sbjct: 301 PWKVLRKVR-NKFVCVHQQQDMPSLKEVALNILPSS 325

[Close]

BLAST of Lag0017244 vs. ExPASy TrEMBL
Match: A0A1S3BKQ4 (protein LOW PSII ACCUMULATION 3, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490732 PE=4 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 1.6e-154
Identity = 286/337 (84.87%), Postives = 298/337 (88.43%), Query Frame = 0


Query: 1   MHFSTANFASTSTIPTAILPLPSPCLACFRISRRKIHRSFASGSMLEFVARKNLRV---- 60
           MHFS ANFAS+STI TA+LPL SP LACFRIS RK HRSF S SM EF+ R+NLRV    
Sbjct: 1   MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPS 60

Query: 61  -SANSSNRASTDLDVPFPRDYSNLLDQAKEATEAALRDNKQLMEIEFPTAGLESVPGDGE 120
            S   ++ ASTDLDVPFPRDYS+LL+QAK+ATEAALRDNKQLMEIEFPTAGLESVPGDGE
Sbjct: 61  LSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120

Query: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTVFEGASLKLDYLTKPS 180
           GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNT FEG S KLDYLTKPS
Sbjct: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS 180

Query: 181 FFEDFGFVEKVKMADRVKAEDELFLVAYPYFNVNALVLFLITEMLVVEELYKEAVLNTTR 240
           FFEDFGFVEKVKMADRVK EDELFLVAYPYFNVN        EMLVVEELYKEAV NTTR
Sbjct: 181 FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVN--------EMLVVEELYKEAVQNTTR 240

Query: 241 KLIIFNGELDRIRSGCLDYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYP 300
           KLIIFNGELDRIRSG   YPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFR YP
Sbjct: 241 KLIIFNGELDRIRSGY--YPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYP 300

Query: 301 GPWKVLRKIRNNKYVCVHQQEDMPSLREVALNILPSS 333
           GPWKVLRK+R NK  CVHQQE+MPSL+EVALNILPSS
Sbjct: 301 GPWKVLRKVR-NKLACVHQQEEMPSLKEVALNILPSS 326

[Close]

BLAST of Lag0017244 vs. ExPASy TrEMBL
Match: A0A6J1CWD3 (protein LOW PSII ACCUMULATION 3, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014905 PE=4 SV=1)

HSP 1 Score: 554.7 bits (1428), Expect = 2.7e-154
Identity = 287/337 (85.16%), Postives = 302/337 (89.61%), Query Frame = 0


Query: 1   MHFSTANFASTSTIPTAILPLPSPCLACFRISRRKIHRSFASGSMLEFVA-RKNLRVSAN 60
           MHFSTANFA TS+I  AILPLPS  LACFRIS RK HRSF SGSMLEF+A R+NLRVSAN
Sbjct: 1   MHFSTANFAFTSSITAAILPLPSRNLACFRISHRKFHRSFVSGSMLEFMACRRNLRVSAN 60

Query: 61  S----SNRASTDLDVPFPRDYSNLLDQAKEATEAALRDNKQLMEIEFPTAGLESVPGDGE 120
           S    S+ AST  DVPFPRDYS+LLDQA++ATEAALRDNKQLMEIEFPTAGLESVPGD E
Sbjct: 61  SGYRESSNASTASDVPFPRDYSDLLDQARKATEAALRDNKQLMEIEFPTAGLESVPGDSE 120

Query: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTVFEGASLKLDYLTKPS 180
           GGIEMTESMQLIRQFCDC IDPLKATRTRVFFPEANEVKFARNT FEGAS KLDYLTKPS
Sbjct: 121 GGIEMTESMQLIRQFCDCSIDPLKATRTRVFFPEANEVKFARNTAFEGASFKLDYLTKPS 180

Query: 181 FFEDFGFVEKVKMADRVKAEDELFLVAYPYFNVNALVLFLITEMLVVEELYKEAVLNTTR 240
           FFEDFGFVEKVKMADRVK EDELFLVAYPYFNVN        EMLVVEELYKEAV+NTTR
Sbjct: 181 FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVN--------EMLVVEELYKEAVVNTTR 240

Query: 241 KLIIFNGELDRIRSGCLDYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYP 300
           KLIIFNGELDRIRSG   YPPFFYPKLAAL KTLFP METVYYIHNFKGQKGGVLFRCYP
Sbjct: 241 KLIIFNGELDRIRSGY--YPPFFYPKLAALAKTLFPMMETVYYIHNFKGQKGGVLFRCYP 300

Query: 301 GPWKVLRKIRNNKYVCVHQQEDMPSLREVALNILPSS 333
           GPWKVLRK+R NK+VC+HQQ+DMPSL+EVALNILP++
Sbjct: 301 GPWKVLRKVR-NKFVCLHQQQDMPSLKEVALNILPAT 326

[Close]

BLAST of Lag0017244 vs. ExPASy TrEMBL
Match: A0A6J1HNL5 (protein LOW PSII ACCUMULATION 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111465233 PE=4 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 4.5e-154
Identity = 284/336 (84.52%), Postives = 297/336 (88.39%), Query Frame = 0


Query: 1   MHFSTANFASTSTIPTAILPLPSPCLACFRISRRKIHRSFASGSMLEFVARKNLRVSANS 60
           M+FS A F S+STIP A+LPLPS   ACFR+  RKIHRS  S S+LEF+A +NLRV +NS
Sbjct: 1   MYFSNAKFVSSSTIPAAVLPLPSRNYACFRMCHRKIHRSLLSSSVLEFMAGRNLRVLSNS 60

Query: 61  SNR----ASTDLDVPFPRDYSNLLDQAKEATEAALRDNKQLMEIEFPTAGLESVPGDGEG 120
           SNR     STD DVPFPRDY +LLDQAK+ATEAALRDNKQLMEIEFPTAGLESVPGDGEG
Sbjct: 61  SNRESSDTSTDFDVPFPRDYFDLLDQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGEG 120

Query: 121 GIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSF 180
           GIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNT FEGAS KLDYLTKPSF
Sbjct: 121 GIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGASFKLDYLTKPSF 180

Query: 181 FEDFGFVEKVKMADRVKAEDELFLVAYPYFNVNALVLFLITEMLVVEELYKEAVLNTTRK 240
           FEDFGFVEKVKMADRVK EDELFLVAYPYFNVN        EMLVVEELYKEAV NTTRK
Sbjct: 181 FEDFGFVEKVKMADRVKPEDELFLVAYPYFNVN--------EMLVVEELYKEAVANTTRK 240

Query: 241 LIIFNGELDRIRSGCLDYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPG 300
           LIIFNGELDRIRSG   YPPFFYPKLAAL KTLFPKMETVYYIHNFKGQKGGVLFRCYPG
Sbjct: 241 LIIFNGELDRIRSGY--YPPFFYPKLAALTKTLFPKMETVYYIHNFKGQKGGVLFRCYPG 300

Query: 301 PWKVLRKIRNNKYVCVHQQEDMPSLREVALNILPSS 333
           PWKVLRK+R NK VCVHQQ+DMPSL+EVALNILPSS
Sbjct: 301 PWKVLRKVR-NKLVCVHQQQDMPSLKEVALNILPSS 325

[Close]

BLAST of Lag0017244 vs. ExPASy TrEMBL
Match: A0A0A0L151 (DUF1995 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G006620 PE=4 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 5.0e-153
Identity = 283/337 (83.98%), Postives = 298/337 (88.43%), Query Frame = 0


Query: 1   MHFSTANFASTSTIPTAILPLPSPCLACFRISRRKIHRSFASGSMLEFVARKNLRV---- 60
           MHF  ANFAS+STI TA+LPLPSP LACFRIS R+ HRS  S SM EF+ R++LRV    
Sbjct: 1   MHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPN 60

Query: 61  -SANSSNRASTDLDVPFPRDYSNLLDQAKEATEAALRDNKQLMEIEFPTAGLESVPGDGE 120
            S   S+ ASTDLDVPFPRDYS+LL+QAK+ATEAAL DNKQLMEIEFPTAGLESVPGDGE
Sbjct: 61  LSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNKQLMEIEFPTAGLESVPGDGE 120

Query: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTVFEGASLKLDYLTKPS 180
           GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNT FEG S KLDYLTKPS
Sbjct: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS 180

Query: 181 FFEDFGFVEKVKMADRVKAEDELFLVAYPYFNVNALVLFLITEMLVVEELYKEAVLNTTR 240
           FFEDFGFVEKVKMADRVK EDELFLVAYPYFNVN        EMLVVEELYKEAV NTTR
Sbjct: 181 FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVN--------EMLVVEELYKEAVQNTTR 240

Query: 241 KLIIFNGELDRIRSGCLDYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYP 300
           KLIIFNGELDRIRSG   YPPFFYPKLAALMKTLFP+METVYYIHNFKGQKGGVLFR YP
Sbjct: 241 KLIIFNGELDRIRSGY--YPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYP 300

Query: 301 GPWKVLRKIRNNKYVCVHQQEDMPSLREVALNILPSS 333
           GPWKVLRK+R NK+VCVHQQE+MPSL+EVALNILPSS
Sbjct: 301 GPWKVLRKVR-NKFVCVHQQEEMPSLKEVALNILPSS 326

[Close]

BLAST of Lag0017244 vs. TAIR 10
Match: AT5G48790.1 (Domain of unknown function (DUF1995) )

HSP 1 Score: 409.1 bits (1050), Expect = 3.5e-114
Identity = 208/277 (75.09%), Postives = 228/277 (82.31%), Query Frame = 0


Query: 56  VSANSSNRASTDLDVPFPRDYSNLLDQAKEATEAALRDNKQLMEIEFPTAGLESVPGDGE 115
           VS   +N  S D +VPFPRDY  L++QAKEA E AL+D KQLMEIEFPT+GL SVPGDGE
Sbjct: 52  VSGGYNNNTSVD-NVPFPRDYVELINQAKEAVEMALKDEKQLMEIEFPTSGLASVPGDGE 111

Query: 116 GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTVFEGASLKLDYLTKPS 175
           G  EMTES+ +IR+FCD  + P KA  TR+FFPEANEVKFA+ TVF G   KLDYLTKPS
Sbjct: 112 GATEMTESINMIREFCDRLLAPEKARSTRIFFPEANEVKFAQKTVFGGTYFKLDYLTKPS 171

Query: 176 FFEDFGFVEKVKMADRVKAEDELFLVAYPYFNVNALVLFLITEMLVVEELYKEAVLNTTR 235
            FEDFGF E+VKMADRVK EDELFLVAYPYFNVN        EMLVVEELYKEAV+NT R
Sbjct: 172 LFEDFGFFERVKMADRVKPEDELFLVAYPYFNVN--------EMLVVEELYKEAVVNTDR 231

Query: 236 KLIIFNGELDRIRSGCLDYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYP 295
           KLIIFNGELDRIRSG   YP FFYPKLAAL KTL PKMETVYYIHNFKGQKGGVLFRCYP
Sbjct: 232 KLIIFNGELDRIRSGY--YPKFFYPKLAALTKTLLPKMETVYYIHNFKGQKGGVLFRCYP 291

Query: 296 GPWKVLRKIRNNKYVCVHQQEDMPSLREVALNILPSS 333
           GPW+VLR+ R NKY+CVHQQE MPSL+EVAL+IL S+
Sbjct: 292 GPWQVLRRTR-NKYICVHQQESMPSLKEVALDILASA 316

[Close]

BLAST of Lag0017244 vs. TAIR 10
Match: AT1G73060.1 (Low PSII Accumulation 3 )

HSP 1 Score: 57.4 bits (137), Expect = 2.6e-08
Identity = 75/294 (25.51%), Postives = 126/294 (42.86%), Query Frame = 0


Query: 56  VSANSSNRASTDLDVPF--PRDYSNLLDQAKEATEAALRDNKQLMEIEFP--TAGLESVP 115
           +S+ SSN +     VP   P+ Y  L   A  +   AL+D+K  +EI+FP   + + S  
Sbjct: 34  ISSTSSN-SDPRRGVPLYKPKSYEVLATDAANSLAFALQDSKSRLEIDFPPLPSSISSYK 93

Query: 116 GDGEGGIE--MTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTVFEGASLKLD 175
           G  +  I+  +  ++ ++R+     +     TR  + FP+  E + A    F+ A   +D
Sbjct: 94  GSSDDFIDANIQLAVTVVRK-----LQEKIETRACIVFPDKPEKRRASQR-FKAAFDSVD 153

Query: 176 YLTKPSFFEDFG-----FVEKVKMADRVKAEDELFLVAYPYFNVNALVLFL--ITEMLVV 235
            ++  S  +  G     F   ++       EDE      P      L +F+   T  L  
Sbjct: 154 GISIGSLDDIPGTSVTNFFRSIRSTLDFDFEDENEGTWEPK-EPPTLYIFINCSTRELSF 213

Query: 236 EELYKEAVLNTTRKLIIFNGELDRIRS--GCLDYPP--FFYPKLAALMKTLF---PKMET 295
            E + E   ++T  L +FN ELD +R+  G L +PP    Y  L+  +   +    +   
Sbjct: 214 IEKFVETFASSTPAL-LFNLELDTLRADLGLLGFPPKDLHYRFLSQFIPVFYIRTREYSK 273

Query: 296 VYYIHNFKGQKGGVLFRCYPGPWKVLRKIRNNKYVCVHQQEDMPSLREVALNIL 330
              +  F     G LFR YPGPW+V+ K  +  + CV +     +L E    +L
Sbjct: 274 TVAVAPFVLNYNGALFRQYPGPWQVMLKQTDGSFACVAESPTRFTLGETKEELL 318

[Close]

BLAST of Lag0017244 vs. TAIR 10
Match: AT5G27560.1 (Domain of unknown function (DUF1995) )

HSP 1 Score: 50.8 bits (120), Expect = 2.4e-06
Identity = 66/266 (24.81%), Postives = 105/266 (39.47%), Query Frame = 0


Query: 67  DLDVPFPRDYSNLLDQAKEATEAALRD--NKQLMEIEFPTAGLESVPGDGEGGIEMTESM 126
           D D   P D    + Q+ EA  A +    N+ ++E+  P   L+ +  +G       E  
Sbjct: 87  DDDDCLPNDLEGAVRQSGEAGAAFVNSGGNRAIVELLIPQ--LQFLDDEG----AQAELW 146

Query: 127 QLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSFFEDFGFVE 186
            L R F +  I      R +  FP+A            GA+  L Y  K +    FGF  
Sbjct: 147 DLSRVFLETLIKETGCERVKAVFPDA------------GAAALLKYRWKDA---TFGF-- 206

Query: 187 KVKMADR--VKAEDELFLVAYPYFNVNALVLFLITEMLVVEELYKEAVLNTTRKLIIFNG 246
              ++DR  V+ EDE+ ++  P + +          +  VE++      +  R LI++N 
Sbjct: 207 -ASLSDRKPVEKEDEIIVMVVPDYQM----------LEYVEKIANGLADDPPRPLIMWNP 266

Query: 247 ELDRIRSGCLDYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVL- 306
            L     G      F   KL     + F    TVY   + +    G +FRCYPG WKV  
Sbjct: 267 RLISEEVGV----GFNVRKLRRYFLSSF---TTVY---SMRPLAAGAVFRCYPGKWKVFY 308

Query: 307 -RKIRNNKYVCVHQQEDMPSLREVAL 327
             K R  +Y+   +    P   ++ +
Sbjct: 327 DNKDRPGRYLLAKELIGRPDAEDLEI 308

The following BLAST results are available for this feature:

BLAST of Lag0017244 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877166.1	7.9e-161	84.86	protein LOW PSII ACCUMULATION 3, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_038877167.1	5.1e-160	87.80	protein LOW PSII ACCUMULATION 3, chloroplastic isoform X2 [Benincasa hispida]	[more]
XP_022923333.1	6.5e-155	84.82	protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita moschata]	[more]
XP_023553103.1	2.5e-154	84.52	protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita pepo subsp. pepo] >XP_...	[more]
XP_008448609.1	3.2e-154	84.87	PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic isoform X2 [Cucumis me...	[more]

BLAST of Lag0017244 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0017244 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E988	3.1e-155	84.82	protein LOW PSII ACCUMULATION 3, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A1S3BKQ4	1.6e-154	84.87	protein LOW PSII ACCUMULATION 3, chloroplastic isoform X2 OS=Cucumis melo OX=365...	[more]
A0A6J1CWD3	2.7e-154	85.16	protein LOW PSII ACCUMULATION 3, chloroplastic isoform X1 OS=Momordica charantia...	[more]
A0A6J1HNL5	4.5e-154	84.52	protein LOW PSII ACCUMULATION 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A0A0L151	5.0e-153	83.98	DUF1995 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G006620 PE=...	[more]

BLAST of Lag0017244 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48790.1	3.5e-114	75.09	Domain of unknown function (DUF1995)	[more]
AT1G73060.1	2.6e-08	25.51	Low PSII Accumulation 3	[more]
AT5G27560.1	2.4e-06	24.81	Domain of unknown function (DUF1995)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 80..100
None	No IPR available	PANTHER	PTHR34051:SF1	PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC ISOFORM X1	coord: 27..331
IPR018962	Domain of unknown function DUF1995	PFAM	PF09353	DUF1995	coord: 73..325 e-value: 7.5E-48 score: 163.2
IPR044687	Protein LOW PSII ACCUMULATION 3	PANTHER	PTHR34051	PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC	coord: 27..331

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0017244.1	Lag0017244.1	mRNA