Lag0017229 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGAGAGGAAATCGCCAATGGTGTTCCGTCTCAAGAAGACATGGTTCAAGCTCACTGCATTTCTCCGCCGCCGGAGACCTTCCCGCCGGCTGCGCTCATTCGGTCGCGACGGCCGGACGCGAGGACTGCGGACTTTCTTGGAAGATGAGACAATTGTCCAGAATTCTACTGTGAGAAGGCTTGAACGTGTTTCGAGTTTGAACTATGGAAGAAATTCCGAGGACGACGTCGATACGCGAGCTCAGGTATTCATCGACAATTTTCGCCGTCATTTGATGTTAGAAAGACAAATCTCTTTGCGATTGAGGTACTGTAGAACTAATAGCTCCGAATCGGAGTATGATGAGAGATCGCCGCCGTGA ATGGCCGAGAGGAAATCGCCAATGGTGTTCCGTCTCAAGAAGACATGGTTCAAGCTCACTGCATTTCTCCGCCGCCGGAGACCTTCCCGCCGGCTGCGCTCATTCGGTCGCGACGGCCGGACGCGAGGACTGCGGACTTTCTTGGAAGATGAGACAATTGTCCAGAATTCTACTGTGAGAAGGCTTGAACGTGTTTCGAGTTTGAACTATGGAAGAAATTCCGAGGACGACGTCGATACGCGAGCTCAGGTATTCATCGACAATTTTCGCCGTCATTTGATGTTAGAAAGACAAATCTCTTTGCGATTGAGGTACTGTAGAACTAATAGCTCCGAATCGGAGTATGATGAGAGATCGCCGCCGTGA ATGGCCGAGAGGAAATCGCCAATGGTGTTCCGTCTCAAGAAGACATGGTTCAAGCTCACTGCATTTCTCCGCCGCCGGAGACCTTCCCGCCGGCTGCGCTCATTCGGTCGCGACGGCCGGACGCGAGGACTGCGGACTTTCTTGGAAGATGAGACAATTGTCCAGAATTCTACTGTGAGAAGGCTTGAACGTGTTTCGAGTTTGAACTATGGAAGAAATTCCGAGGACGACGTCGATACGCGAGCTCAGGTATTCATCGACAATTTTCGCCGTCATTTGATGTTAGAAAGACAAATCTCTTTGCGATTGAGGTACTGTAGAACTAATAGCTCCGAATCGGAGTATGATGAGAGATCGCCGCCGTGA MAERKSPMVFRLKKTWFKLTAFLRRRRPSRRLRSFGRDGRTRGLRTFLEDETIVQNSTVRRLERVSSLNYGRNSEDDVDTRAQVFIDNFRRHLMLERQISLRLRYCRTNSSESEYDERSPP Homology
BLAST of Lag0017229 vs. NCBI nr
Match: KAG6596691.1 (hypothetical protein SDJN03_09871, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028225.1 hypothetical protein SDJN02_09405, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 151.8 bits (382), Expect = 3.9e-33 Identity = 84/125 (67.20%), Postives = 101/125 (80.80%), Query Frame = 0
BLAST of Lag0017229 vs. NCBI nr
Match: XP_022145292.1 (uncharacterized protein LOC111014780 [Momordica charantia]) HSP 1 Score: 138.7 bits (348), Expect = 3.4e-29 Identity = 82/129 (63.57%), Postives = 96/129 (74.42%), Query Frame = 0
BLAST of Lag0017229 vs. NCBI nr
Match: KAG7015798.1 (hypothetical protein SDJN02_23436, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 133.7 bits (335), Expect = 1.1e-27 Identity = 77/125 (61.60%), Postives = 92/125 (73.60%), Query Frame = 0
BLAST of Lag0017229 vs. NCBI nr
Match: KAG6577759.1 (hypothetical protein SDJN03_25333, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 131.3 bits (329), Expect = 5.5e-27 Identity = 76/125 (60.80%), Postives = 91/125 (72.80%), Query Frame = 0
BLAST of Lag0017229 vs. NCBI nr
Match: KAA0052985.1 (hypothetical protein E6C27_scaffold344G00960 [Cucumis melo var. makuwa] >TYK11441.1 hypothetical protein E5676_scaffold139G00970 [Cucumis melo var. makuwa]) HSP 1 Score: 120.6 bits (301), Expect = 9.6e-24 Identity = 73/126 (57.94%), Postives = 89/126 (70.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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