Lag0017228 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0017228
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Mediator of RNA polymerase II transcription subunit 12-like isoform X1
Location	chr5: 1188792 .. 1190209 (-)
RNA-Seq Expression	Lag0017228
Synteny	Lag0017228

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGATAAATGTTTGGGATTTGTTTTGCATATGAATGGTAATATGATTGATGGTGTAGATGGAATTGAATATGATCGACCCGCATGTGGTGGTTTCACTGTTAATGCTCGTAGTGGGGTTGTCTTTGAACAATTTATTGAAATGATAGGATTATCGTTGGGTGTAAATGTTAGGGAAAATCAGTTGGATATAGTGTATAGACACCCTGAAGTATCACCATTAGGATCAGTTAGATTTATGCCAATATCTATCCCTAACAATCAAGCGATGGATTTGATGTTTTCAATTGCATTACCTGTCCCAAATGTTGTACATTTATATGTCAATGTCAGAAGAATAGAAGATAATGCACAAAATTTTGGAGAAATTCCCAGCCAATGTTTTGAACCTAGCCAATGCATCGATCCCGAGCCTGAATCAGTAGCACCACCATGTGATGGTGAAGATGTAGTTGTTGATAATACATTTAAAGAGTTAAGGACCGAAACAGATGATGAGTTTGAAGATTTGGATTTTGATGATCGTGAACATACAATCCCTTCAGTAGTATTCACCCAACTAGATGGTCACACAGTAGATAGCACTATAGAACATGACCCAATTGTAGCACCAGTGCCAGTTCAAAATGATTTGTTGTACAAGGGTTTGATTTGTCAAGACAAAGAGAATATTACTAGACGATTCATCACTCGCGAGGGAGCCTCGTATGGTCAAGCGGTACGTTTTCAATTTCAAGTTTTCTTAATTTATATTAAATATTATCTAATCAATATTAAATATTCTCTAAGTTATATTACTATATGAAGAGGTCATGCTTCAGACGCATCCGTGATCTCTCTGAAGATATGCAGATCTTAAATTTGTGCAACAGTGGTGATGACAATATGGAGCAGCTCCATTATATGTACAACATACCTATTGCACCTCCTCATGGACCTAGGCGTAGAAGAGGTGCTCGTGCCCAAGAAGAGGATGTTCCAGTACAAGAGGATATTCTGGTACAGGAGAATATTCCAGTACAACCTTATATTCCAGTATATGAGGATGTTCCAGTACAGCCTCATATTACAGTACATGAGCATATTCCAGTCCAGGAGCCTTTCCCACCAGTTATACCAGAAGAATTTCACCACAATGTTGAAGACATGCCTCCTTTTACTCAGACGCAGGATGGTGCTGGTCCGTCCACTCCAGTGATGACTATTCCACCATCATGGCATGATTATGAGGCTGGTCCTTCATCGTCATCTGCTCACGGGCGTGGACGTGGACGTGGAGAGCATGCACAATATGTATACCCTACAGAGCTTGTAGAGGAACCTAGGGAAGAGGAGGATCCAGATGATCAGGTACCGAGGGCTCGTCGTCGGCAACCAGCTCGTAATCGGCGACGTCCGCCTTGTGGCACACATTAG

mRNA sequence

ATGGAAGATAAATGTTTGGGATTTGTTTTGCATATGAATGGTAATATGATTGATGGTGTAGATGGAATTGAATATGATCGACCCGCATGTGGTGGTTTCACTGTTAATGCTCGTAGTGGGGTTGTCTTTGAACAATTTATTGAAATGATAGGATTATCGTTGGGTGTAAATGTTAGGGAAAATCAGTTGGATATAGTGTATAGACACCCTGAAGTATCACCATTAGGATCAGTTAGATTTATGCCAATATCTATCCCTAACAATCAAGCGATGGATTTGATGTTTTCAATTGCATTACCTGTCCCAAATGTTGTACATTTATATGTCAATGTCAGAAGAATAGAAGATAATGCACAAAATTTTGGAGAAATTCCCAGCCAATGTTTTGAACCTAGCCAATGCATCGATCCCGAGCCTGAATCAGTAGCACCACCATGTGATGGTGAAGATGTAGTTGTTGATAATACATTTAAAGAGTTAAGGACCGAAACAGATGATGAGTTTGAAGATTTGGATTTTGATGATCGTGAACATACAATCCCTTCAGTAGTATTCACCCAACTAGATGGTCACACAGTAGATAGCACTATAGAACATGACCCAATTGTAGCACCAGTGCCAGTTCAAAATGATTTGTTGTACAAGGGTTTGATTTGTCAAGACAAAGAGAATATTACTAGACGATTCATCACTCGCGAGGGAGCCTCGTATGGTCAAGCGAGGTCATGCTTCAGACGCATCCGTGATCTCTCTGAAGATATGCAGATCTTAAATTTGTGCAACAGTGGTGATGACAATATGGAGCAGCTCCATTATATGTACAACATACCTATTGCACCTCCTCATGGACCTAGGCGTAGAAGAGGTGCTCGTGCCCAAGAAGAGGATGTTCCAGTACAAGAGGATATTCTGGTACAGGAGAATATTCCAGTACAACCTTATATTCCAGTATATGAGGATGTTCCAGTACAGCCTCATATTACAGTACATGAGCATATTCCAGTCCAGGAGCCTTTCCCACCAGTTATACCAGAAGAATTTCACCACAATGTTGAAGACATGCCTCCTTTTACTCAGACGCAGGATGGTGCTGGTCCGTCCACTCCAGTGATGACTATTCCACCATCATGGCATGATTATGAGGCTGGTCCTTCATCGTCATCTGCTCACGGGCGTGGACGTGGACGTGGAGAGCATGCACAATATGTATACCCTACAGAGCTTGTAGAGGAACCTAGGGAAGAGGAGGATCCAGATGATCAGGTACCGAGGGCTCGTCGTCGGCAACCAGCTCGTAATCGGCGACGTCCGCCTTGTGGCACACATTAG

Coding sequence (CDS)

ATGGAAGATAAATGTTTGGGATTTGTTTTGCATATGAATGGTAATATGATTGATGGTGTAGATGGAATTGAATATGATCGACCCGCATGTGGTGGTTTCACTGTTAATGCTCGTAGTGGGGTTGTCTTTGAACAATTTATTGAAATGATAGGATTATCGTTGGGTGTAAATGTTAGGGAAAATCAGTTGGATATAGTGTATAGACACCCTGAAGTATCACCATTAGGATCAGTTAGATTTATGCCAATATCTATCCCTAACAATCAAGCGATGGATTTGATGTTTTCAATTGCATTACCTGTCCCAAATGTTGTACATTTATATGTCAATGTCAGAAGAATAGAAGATAATGCACAAAATTTTGGAGAAATTCCCAGCCAATGTTTTGAACCTAGCCAATGCATCGATCCCGAGCCTGAATCAGTAGCACCACCATGTGATGGTGAAGATGTAGTTGTTGATAATACATTTAAAGAGTTAAGGACCGAAACAGATGATGAGTTTGAAGATTTGGATTTTGATGATCGTGAACATACAATCCCTTCAGTAGTATTCACCCAACTAGATGGTCACACAGTAGATAGCACTATAGAACATGACCCAATTGTAGCACCAGTGCCAGTTCAAAATGATTTGTTGTACAAGGGTTTGATTTGTCAAGACAAAGAGAATATTACTAGACGATTCATCACTCGCGAGGGAGCCTCGTATGGTCAAGCGAGGTCATGCTTCAGACGCATCCGTGATCTCTCTGAAGATATGCAGATCTTAAATTTGTGCAACAGTGGTGATGACAATATGGAGCAGCTCCATTATATGTACAACATACCTATTGCACCTCCTCATGGACCTAGGCGTAGAAGAGGTGCTCGTGCCCAAGAAGAGGATGTTCCAGTACAAGAGGATATTCTGGTACAGGAGAATATTCCAGTACAACCTTATATTCCAGTATATGAGGATGTTCCAGTACAGCCTCATATTACAGTACATGAGCATATTCCAGTCCAGGAGCCTTTCCCACCAGTTATACCAGAAGAATTTCACCACAATGTTGAAGACATGCCTCCTTTTACTCAGACGCAGGATGGTGCTGGTCCGTCCACTCCAGTGATGACTATTCCACCATCATGGCATGATTATGAGGCTGGTCCTTCATCGTCATCTGCTCACGGGCGTGGACGTGGACGTGGAGAGCATGCACAATATGTATACCCTACAGAGCTTGTAGAGGAACCTAGGGAAGAGGAGGATCCAGATGATCAGGTACCGAGGGCTCGTCGTCGGCAACCAGCTCGTAATCGGCGACGTCCGCCTTGTGGCACACATTAG

Protein sequence

MEDKCLGFVLHMNGNMIDGVDGIEYDRPACGGFTVNARSGVVFEQFIEMIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLYVNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAPPCDGEDVVVDNTFKELRTETDDEFEDLDFDDREHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQDKENITRRFITREGASYGQARSCFRRIRDLSEDMQILNLCNSGDDNMEQLHYMYNIPIAPPHGPRRRRGARAQEEDVPVQEDILVQENIPVQPYIPVYEDVPVQPHITVHEHIPVQEPFPPVIPEEFHHNVEDMPPFTQTQDGAGPSTPVMTIPPSWHDYEAGPSSSSAHGRGRGRGEHAQYVYPTELVEEPREEEDPDDQVPRARRRQPARNRRRPPCGTH

Homology

[Close]

BLAST of Lag0017228 vs. NCBI nr
Match: KAA0041167.1 (uncharacterized protein E6C27_scaffold128G00980 [Cucumis melo var. makuwa])

HSP 1 Score: 248.4 bits (633), Expect = 1.1e-61
Identity = 122/229 (53.28%), Postives = 164/229 (71.62%), Query Frame = 0


Query: 1   MEDKCLGFVLHMNGNMIDGVDGIEYDRPACGGFTVNARSGVVFEQFIEMIGLSLGVNVRE 60
           M DK LGF+L +NGNMIDG DGI+YD+PACGGFT++  SG+VFEQFIE++G S+G+++R 
Sbjct: 1   MADKILGFMLFVNGNMIDGSDGIDYDQPACGGFTISVNSGIVFEQFIEIVGSSVGIDIRI 60

Query: 61  NQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLYVNVRRIEDNAQN 120
           + ++I+YRHP+++P G +RFMP  IPN QAM  MFSIA+P+ N+VHLYVNV R+  +   
Sbjct: 61  SDIEIIYRHPDLTPSGLIRFMPFPIPNEQAMKTMFSIAMPISNMVHLYVNVSRVSLDINL 120

Query: 121 FGEIPSQCFEPSQCIDPEPESVAP-PCDGEDVVVDNTFKELRTETD---DEFEDLDFDDR 180
             +   Q  + +Q I P+ E VA    D E+++ +N   + RTE D   DEFE+ DFD R
Sbjct: 121 NSKSFCQLEDRTQVIVPDSELVASLVYDDEEMMANNDNIDFRTEIDDEFDEFEEFDFDGR 180

Query: 181 EHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQDKENI 226
           EH +PS   TQ+D   +DS  EHDPIVAP+ V N  LYKG+ICQDKE +
Sbjct: 181 EHELPSNTLTQIDMDVIDSIREHDPIVAPMVVDNSELYKGMICQDKETL 229

[Close]

BLAST of Lag0017228 vs. NCBI nr
Match: KAA0034014.1 (uncharacterized protein E6C27_scaffold400G00820 [Cucumis melo var. makuwa])

HSP 1 Score: 173.7 bits (439), Expect = 3.5e-39
Identity = 92/193 (47.67%), Postives = 126/193 (65.28%), Query Frame = 0


Query: 49  MIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLY 108
           M+GLSLGV++  +Q++I+YRHP ++  G+VRF+P  I N Q M+ MFSIALP PN+VHLY
Sbjct: 1   MVGLSLGVDMSSSQIEIIYRHPNLTASGTVRFIPFPISNEQEMNTMFSIALPFPNMVHLY 60

Query: 109 VNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAPP-CDGEDVVVDNTFKELRTETDDE 168
           V V  + D A N    P       + +D EPES APP C  E++V  N + E RTETDDE
Sbjct: 61  VTVSMV-DTAINLNVEPRYV---EEYVDVEPESDAPPVCHEEEMVATNEYTEFRTETDDE 120

Query: 169 FEDLDFDDREHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQDKE---N 228
           FE++DFD  E+ +PS  FT LD + VD+  EHDPI+ P+   N  LY G+IC++KE   +
Sbjct: 121 FEEMDFDGCEYEVPSNTFTDLDMNAVDAIQEHDPIIVPMVTDNTKLYTGMICENKEMMQH 180

Query: 229 ITRRFITREGASY 238
           + + F  +  A Y
Sbjct: 181 MVKCFAIKSHAPY 189

[Close]

BLAST of Lag0017228 vs. NCBI nr
Match: TYJ95836.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 172.9 bits (437), Expect = 6.0e-39
Identity = 92/193 (47.67%), Postives = 125/193 (64.77%), Query Frame = 0


Query: 49  MIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLY 108
           M+GLSLGV++  +Q++I+YRHP ++  G+VRFMP  I N Q M+ MFSIALP PN+VHLY
Sbjct: 1   MVGLSLGVDMSSSQIEIIYRHPNLTASGTVRFMPFPISNEQEMNTMFSIALPFPNMVHLY 60

Query: 109 VNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAPP-CDGEDVVVDNTFKELRTETDDE 168
           V V  + D A N    P       + +D EPES APP C  E++V  N + E RTETDDE
Sbjct: 61  VTVSMV-DTAINLNVEPRYV---EEYVDVEPESDAPPVCHEEEMVATNEYTEFRTETDDE 120

Query: 169 FEDLDFDDREHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQDK---EN 228
           FE++DFD  E+ +PS  FT LD + VD   EHDPI+ P+   N  LY G+IC++K   ++
Sbjct: 121 FEEMDFDGCEYEVPSNTFTDLDMNAVDVIQEHDPIIVPMVTDNTKLYTGMICENKKMLQH 180

Query: 229 ITRRFITREGASY 238
           + + F  +  A Y
Sbjct: 181 MVKCFAIKSHAPY 189

[Close]

BLAST of Lag0017228 vs. NCBI nr
Match: KAA0036768.1 (uncharacterized protein E6C27_scaffold20G00510 [Cucumis melo var. makuwa])

HSP 1 Score: 166.4 bits (420), Expect = 5.6e-37
Identity = 90/193 (46.63%), Postives = 123/193 (63.73%), Query Frame = 0


Query: 49  MIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLY 108
           M+GLSLGV++  +Q++I+YRHP ++  G+VRFMP  I N Q M+ MFSIAL  PN+VHLY
Sbjct: 1   MVGLSLGVDMSSSQIEIIYRHPNLTASGTVRFMPFPISNEQEMNTMFSIALSFPNMVHLY 60

Query: 109 VNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAP-PCDGEDVVVDNTFKELRTETDDE 168
           V V  + D A N    P       + +D EPES AP  C  E++V  N + E RTETDDE
Sbjct: 61  VTVSMV-DTAINLNVEPRYV---EEYVDVEPESDAPLVCHEEEMVATNEYTEFRTETDDE 120

Query: 169 FEDLDFDDREHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQDK---EN 228
           FE++DFD  E+ +PS  FT LD + VD   EHDPI+ P+   N  LY G+IC++K   ++
Sbjct: 121 FEEMDFDGCEYEVPSNTFTDLDMNAVDVIQEHDPIIVPMVTDNTKLYTGMICENKKMLQH 180

Query: 229 ITRRFITREGASY 238
           + + F  +  A Y
Sbjct: 181 MVKCFAIKSHAPY 189

[Close]

BLAST of Lag0017228 vs. NCBI nr
Match: KAA0040476.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa] >TYK23484.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 164.1 bits (414), Expect = 2.8e-36
Identity = 87/176 (49.43%), Postives = 115/176 (65.34%), Query Frame = 0


Query: 49  MIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLY 108
           M+GLSLGV++  +Q++I+YRH  ++  G+VRFMP  I N Q M+ MFSI LP  N+VHLY
Sbjct: 1   MVGLSLGVDMSSSQIEIIYRHLNLTASGTVRFMPFPISNEQEMNTMFSITLPFLNMVHLY 60

Query: 109 VNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAPP-CDGEDVVVDNTFKELRTETDDE 168
           V V  + D A N    P       + +D EPES APP C  E++V  N + E RTETDDE
Sbjct: 61  VTVSMV-DTAINLNVEPRYV---EEYVDVEPESNAPPVCHEEEMVATNEYTEFRTETDDE 120

Query: 169 FEDLDFDDREHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQDKE 224
           FE++DFD  E+ +PS  FT LD + VD   EHDPI+ P+   N  LY G+IC++KE
Sbjct: 121 FEEMDFDGCEYEVPSNKFTDLDMNAVDGIQEHDPIIVPMVTDNTKLYTGMICENKE 172

[Close]

BLAST of Lag0017228 vs. ExPASy TrEMBL
Match: A0A5A7THR5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00980 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 5.4e-62
Identity = 122/229 (53.28%), Postives = 164/229 (71.62%), Query Frame = 0


Query: 1   MEDKCLGFVLHMNGNMIDGVDGIEYDRPACGGFTVNARSGVVFEQFIEMIGLSLGVNVRE 60
           M DK LGF+L +NGNMIDG DGI+YD+PACGGFT++  SG+VFEQFIE++G S+G+++R 
Sbjct: 1   MADKILGFMLFVNGNMIDGSDGIDYDQPACGGFTISVNSGIVFEQFIEIVGSSVGIDIRI 60

Query: 61  NQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLYVNVRRIEDNAQN 120
           + ++I+YRHP+++P G +RFMP  IPN QAM  MFSIA+P+ N+VHLYVNV R+  +   
Sbjct: 61  SDIEIIYRHPDLTPSGLIRFMPFPIPNEQAMKTMFSIAMPISNMVHLYVNVSRVSLDINL 120

Query: 121 FGEIPSQCFEPSQCIDPEPESVAP-PCDGEDVVVDNTFKELRTETD---DEFEDLDFDDR 180
             +   Q  + +Q I P+ E VA    D E+++ +N   + RTE D   DEFE+ DFD R
Sbjct: 121 NSKSFCQLEDRTQVIVPDSELVASLVYDDEEMMANNDNIDFRTEIDDEFDEFEEFDFDGR 180

Query: 181 EHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQDKENI 226
           EH +PS   TQ+D   +DS  EHDPIVAP+ V N  LYKG+ICQDKE +
Sbjct: 181 EHELPSNTLTQIDMDVIDSIREHDPIVAPMVVDNSELYKGMICQDKETL 229

[Close]

BLAST of Lag0017228 vs. ExPASy TrEMBL
Match: A0A5A7SS31 (DBD_Tnp_Mut domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold400G00820 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.7e-39
Identity = 92/193 (47.67%), Postives = 126/193 (65.28%), Query Frame = 0


Query: 49  MIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLY 108
           M+GLSLGV++  +Q++I+YRHP ++  G+VRF+P  I N Q M+ MFSIALP PN+VHLY
Sbjct: 1   MVGLSLGVDMSSSQIEIIYRHPNLTASGTVRFIPFPISNEQEMNTMFSIALPFPNMVHLY 60

Query: 109 VNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAPP-CDGEDVVVDNTFKELRTETDDE 168
           V V  + D A N    P       + +D EPES APP C  E++V  N + E RTETDDE
Sbjct: 61  VTVSMV-DTAINLNVEPRYV---EEYVDVEPESDAPPVCHEEEMVATNEYTEFRTETDDE 120

Query: 169 FEDLDFDDREHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQDKE---N 228
           FE++DFD  E+ +PS  FT LD + VD+  EHDPI+ P+   N  LY G+IC++KE   +
Sbjct: 121 FEEMDFDGCEYEVPSNTFTDLDMNAVDAIQEHDPIIVPMVTDNTKLYTGMICENKEMMQH 180

Query: 229 ITRRFITREGASY 238
           + + F  +  A Y
Sbjct: 181 MVKCFAIKSHAPY 189

[Close]

BLAST of Lag0017228 vs. ExPASy TrEMBL
Match: A0A5D3BAB0 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001240 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.9e-39
Identity = 92/193 (47.67%), Postives = 125/193 (64.77%), Query Frame = 0


Query: 49  MIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLY 108
           M+GLSLGV++  +Q++I+YRHP ++  G+VRFMP  I N Q M+ MFSIALP PN+VHLY
Sbjct: 1   MVGLSLGVDMSSSQIEIIYRHPNLTASGTVRFMPFPISNEQEMNTMFSIALPFPNMVHLY 60

Query: 109 VNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAPP-CDGEDVVVDNTFKELRTETDDE 168
           V V  + D A N    P       + +D EPES APP C  E++V  N + E RTETDDE
Sbjct: 61  VTVSMV-DTAINLNVEPRYV---EEYVDVEPESDAPPVCHEEEMVATNEYTEFRTETDDE 120

Query: 169 FEDLDFDDREHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQDK---EN 228
           FE++DFD  E+ +PS  FT LD + VD   EHDPI+ P+   N  LY G+IC++K   ++
Sbjct: 121 FEEMDFDGCEYEVPSNTFTDLDMNAVDVIQEHDPIIVPMVTDNTKLYTGMICENKKMLQH 180

Query: 229 ITRRFITREGASY 238
           + + F  +  A Y
Sbjct: 181 MVKCFAIKSHAPY 189

[Close]

BLAST of Lag0017228 vs. ExPASy TrEMBL
Match: A0A5A7T1X8 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G00510 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 2.7e-37
Identity = 90/193 (46.63%), Postives = 123/193 (63.73%), Query Frame = 0


Query: 49  MIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLY 108
           M+GLSLGV++  +Q++I+YRHP ++  G+VRFMP  I N Q M+ MFSIAL  PN+VHLY
Sbjct: 1   MVGLSLGVDMSSSQIEIIYRHPNLTASGTVRFMPFPISNEQEMNTMFSIALSFPNMVHLY 60

Query: 109 VNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAP-PCDGEDVVVDNTFKELRTETDDE 168
           V V  + D A N    P       + +D EPES AP  C  E++V  N + E RTETDDE
Sbjct: 61  VTVSMV-DTAINLNVEPRYV---EEYVDVEPESDAPLVCHEEEMVATNEYTEFRTETDDE 120

Query: 169 FEDLDFDDREHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQDK---EN 228
           FE++DFD  E+ +PS  FT LD + VD   EHDPI+ P+   N  LY G+IC++K   ++
Sbjct: 121 FEEMDFDGCEYEVPSNTFTDLDMNAVDVIQEHDPIIVPMVTDNTKLYTGMICENKKMLQH 180

Query: 229 ITRRFITREGASY 238
           + + F  +  A Y
Sbjct: 181 MVKCFAIKSHAPY 189

[Close]

BLAST of Lag0017228 vs. ExPASy TrEMBL
Match: A0A5D3DIM2 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold278G00560 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.3e-36
Identity = 87/176 (49.43%), Postives = 115/176 (65.34%), Query Frame = 0


Query: 49  MIGLSLGVNVRENQLDIVYRHPEVSPLGSVRFMPISIPNNQAMDLMFSIALPVPNVVHLY 108
           M+GLSLGV++  +Q++I+YRH  ++  G+VRFMP  I N Q M+ MFSI LP  N+VHLY
Sbjct: 1   MVGLSLGVDMSSSQIEIIYRHLNLTASGTVRFMPFPISNEQEMNTMFSITLPFLNMVHLY 60

Query: 109 VNVRRIEDNAQNFGEIPSQCFEPSQCIDPEPESVAPP-CDGEDVVVDNTFKELRTETDDE 168
           V V  + D A N    P       + +D EPES APP C  E++V  N + E RTETDDE
Sbjct: 61  VTVSMV-DTAINLNVEPRYV---EEYVDVEPESNAPPVCHEEEMVATNEYTEFRTETDDE 120

Query: 169 FEDLDFDDREHTIPSVVFTQLDGHTVDSTIEHDPIVAPVPVQNDLLYKGLICQDKE 224
           FE++DFD  E+ +PS  FT LD + VD   EHDPI+ P+   N  LY G+IC++KE
Sbjct: 121 FEEMDFDGCEYEVPSNKFTDLDMNAVDGIQEHDPIIVPMVTDNTKLYTGMICENKE 172

The following BLAST results are available for this feature:

BLAST of Lag0017228 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0041167.1	1.1e-61	53.28	uncharacterized protein E6C27_scaffold128G00980 [Cucumis melo var. makuwa]	[more]
KAA0034014.1	3.5e-39	47.67	uncharacterized protein E6C27_scaffold400G00820 [Cucumis melo var. makuwa]	[more]
TYJ95836.1	6.0e-39	47.67	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
KAA0036768.1	5.6e-37	46.63	uncharacterized protein E6C27_scaffold20G00510 [Cucumis melo var. makuwa]	[more]
KAA0040476.1	2.8e-36	49.43	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]

BLAST of Lag0017228 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0017228 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7THR5	5.4e-62	53.28	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7SS31	1.7e-39	47.67	DBD_Tnp_Mut domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5D3BAB0	2.9e-39	47.67	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5A7T1X8	2.7e-37	46.63	SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A5D3DIM2	1.3e-36	49.43	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]

BLAST of Lag0017228 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 356..442

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0017228.1	Lag0017228.1	mRNA