Lag0017201 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0017201
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Bis(5'-adenosyl)-triphosphatase
Location	chr5: 935222 .. 936238 (+)
RNA-Seq Expression	Lag0017201
Synteny	Lag0017201

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCTTACGTTTTCAAGCATATCGCGCATCTCTTTCCCTTACCAGTTCTTCTTTCCTGAATTTTGGCTCATCAAAATCAAAATCAAAACTAGGGTTTTCTTCCATTTCTTCTTCTCCAACGCGATCCTTCGCCAAGGTAATTCTTCTTCGCCATCACGAATCTGCTTTTCAGTTCATCACATTTAGTTCCTCTTTTTCATTTCACTTCCGTAATCGCAGATGGCATCAGACCACTACACGTTTGGGCGTTACAAGATAGACCCGAAGGAAGTATTCTTCTGCACTGGTCTCTCTTACGCCATGGTCAACCTCCGTCCTCTTCTTCCTGGTACTCTATTTTTGTTTTTCTTTTGTGGCTTTTCCTTTATCGTATGGAGTTTGGTTTCATTGAGAACATTAACCAGTTTAGTAAGGCGATCTGGAGCTGAGTTGAGCAATAATCGGTGCTGTATCCTAACATAGTTTTCAATTACAAATATAAAATCTCGAAAAATAGTTATCTATCTCTTCATCATCCAACGTAGTGTTGTGGAGTAACAGGAAGTTAACACAGTTATTCAGAGTTGTATGAATTTTCGAGCTCATTCAAAATTGAATTGTGTTCTTGTAGTTTGAATACTATGAGTATTTGGGTCAATTTACGTGCAACTTGATTGATCTCATGGGACGAGCTTTTGGCCCTATGACATTCGACTCATAGGACTATGGGTTGCTACCATAGTGTTCGAAATTTGAATCCATACTCTATAGTTCTCTATGGCACTTGCATCTTTCCTCAAAGACTACTAGGTCAATCCATAGTAATTGTGTTTTATCTGTATTTAGTGATGGAGAAACCAAGGGTAATCGTTTTGGACTTTTTGCAGGGGGCATGTGGTACAGACTTAATTTTGAAGTCTTTTACCAAACCTTCTGTTGGAATATTTGGGGTGGTAGGGCTCCTAAAAGCAGAGTAGCTTTTTTTTGGAGGTGGATAATTTCAGCAATGTACGGGATTGTGGATGGATTGGAGTAG

mRNA sequence

ATGCTCTTACGTTTTCAAGCATATCGCGCATCTCTTTCCCTTACCAGTTCTTCTTTCCTGAATTTTGGCTCATCAAAATCAAAATCAAAACTAGGGTTTTCTTCCATTTCTTCTTCTCCAACGCGATCCTTCGCCAAGATGGCATCAGACCACTACACGTTTGGGCGTTACAAGATAGACCCGAAGGAAGTATTCTTCTGCACTGGTCTCTCTTACGCCATGGTCAACCTCCGTCCTCTTCTTCCTGGGGGCATGTGGTACAGACTTAATTTTGAAGTCTTTTACCAAACCTTCTGTTGGAATATTTGGGGTGGTAGGGCTCCTAAAAGCAGAGTAGCTTTTTTTTGGAGGTGGATAATTTCAGCAATGTACGGGATTGTGGATGGATTGGAGTAG

Coding sequence (CDS)

ATGCTCTTACGTTTTCAAGCATATCGCGCATCTCTTTCCCTTACCAGTTCTTCTTTCCTGAATTTTGGCTCATCAAAATCAAAATCAAAACTAGGGTTTTCTTCCATTTCTTCTTCTCCAACGCGATCCTTCGCCAAGATGGCATCAGACCACTACACGTTTGGGCGTTACAAGATAGACCCGAAGGAAGTATTCTTCTGCACTGGTCTCTCTTACGCCATGGTCAACCTCCGTCCTCTTCTTCCTGGGGGCATGTGGTACAGACTTAATTTTGAAGTCTTTTACCAAACCTTCTGTTGGAATATTTGGGGTGGTAGGGCTCCTAAAAGCAGAGTAGCTTTTTTTTGGAGGTGGATAATTTCAGCAATGTACGGGATTGTGGATGGATTGGAGTAG

Protein sequence

MLLRFQAYRASLSLTSSSFLNFGSSKSKSKLGFSSISSSPTRSFAKMASDHYTFGRYKIDPKEVFFCTGLSYAMVNLRPLLPGGMWYRLNFEVFYQTFCWNIWGGRAPKSRVAFFWRWIISAMYGIVDGLE

Homology

[Close]

BLAST of Lag0017201 vs. NCBI nr
Match: XP_038876562.1 (bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT isoform X1 [Benincasa hispida])

HSP 1 Score: 125.2 bits (313), Expect = 4.2e-25
Identity = 66/83 (79.52%), Postives = 72/83 (86.75%), Query Frame = 0


Query: 1  MLLRFQAYRASLSLTSSSFLNFGSSKSKSKLGFSSISSSPTRSFAKMASDHYTFGRYKID 60
          MLLRFQA RA L L SS F+ FG SK   +LGF+SISSSPT+SFAKMASDHYTFGRYKID
Sbjct: 1  MLLRFQASRAFLPLPSSCFMKFGPSK---QLGFTSISSSPTKSFAKMASDHYTFGRYKID 60

Query: 61 PKEVFFCTGLSYAMVNLRPLLPG 84
          PKEVF+CT LSYAMVNLRPL+PG
Sbjct: 61 PKEVFYCTTLSYAMVNLRPLVPG 80

[Close]

BLAST of Lag0017201 vs. NCBI nr
Match: XP_038876563.1 (bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT isoform X2 [Benincasa hispida])

HSP 1 Score: 125.2 bits (313), Expect = 4.2e-25
Identity = 66/83 (79.52%), Postives = 72/83 (86.75%), Query Frame = 0


Query: 1  MLLRFQAYRASLSLTSSSFLNFGSSKSKSKLGFSSISSSPTRSFAKMASDHYTFGRYKID 60
          MLLRFQA RA L L SS F+ FG SK   +LGF+SISSSPT+SFAKMASDHYTFGRYKID
Sbjct: 1  MLLRFQASRAFLPLPSSCFMKFGPSK---QLGFTSISSSPTKSFAKMASDHYTFGRYKID 60

Query: 61 PKEVFFCTGLSYAMVNLRPLLPG 84
          PKEVF+CT LSYAMVNLRPL+PG
Sbjct: 61 PKEVFYCTTLSYAMVNLRPLVPG 80

[Close]

BLAST of Lag0017201 vs. NCBI nr
Match: TYK11419.1 (bis(5'-adenosyl)-triphosphatase isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 114.8 bits (286), Expect = 5.7e-22
Identity = 66/95 (69.47%), Postives = 74/95 (77.89%), Query Frame = 0


Query: 1  MLLRFQAYRASLSLTSSSFLNFGSSKSKSKLGFSSISSSPTRSFAKM-ASDHYTFGRYKI 60
          M+LRFQA RA L LT SSFL F    S  +LGF+SISSSPT+SF  M ASDHYTFGRYKI
Sbjct: 1  MVLRFQASRALLPLTPSSFLKF--CPSSIQLGFTSISSSPTKSFTIMAASDHYTFGRYKI 60

Query: 61 DPKEVFFCTGLSYAMVNLRPLLPGGMWYRLNFEVF 95
          DPKEVF+CT LSYAMVNLRPLLPG M    + ++F
Sbjct: 61 DPKEVFYCTTLSYAMVNLRPLLPGQMANVTDTQIF 93

[Close]

BLAST of Lag0017201 vs. NCBI nr
Match: XP_016900576.1 (PREDICTED: bis(5'-adenosyl)-triphosphatase isoform X1 [Cucumis melo])

HSP 1 Score: 113.2 bits (282), Expect = 1.7e-21
Identity = 64/84 (76.19%), Postives = 69/84 (82.14%), Query Frame = 0


Query: 1  MLLRFQAYRASLSLTSSSFLNFGSSKSKSKLGFSSISSSPTRSFAKM-ASDHYTFGRYKI 60
          M+LRFQA RA L LT SSFL F    S  +LGF+SISSSPT+SF  M ASDHYTFGRYKI
Sbjct: 1  MVLRFQASRALLPLTPSSFLKF--CPSSIQLGFTSISSSPTKSFTIMAASDHYTFGRYKI 60

Query: 61 DPKEVFFCTGLSYAMVNLRPLLPG 84
          DPKEVF+CT LSYAMVNLRPLLPG
Sbjct: 61 DPKEVFYCTTLSYAMVNLRPLLPG 82

[Close]

BLAST of Lag0017201 vs. NCBI nr
Match: XP_008448553.1 (PREDICTED: bis(5'-adenosyl)-triphosphatase isoform X2 [Cucumis melo])

HSP 1 Score: 110.9 bits (276), Expect = 8.3e-21
Identity = 63/83 (75.90%), Postives = 68/83 (81.93%), Query Frame = 0


Query: 1  MLLRFQAYRASLSLTSSSFLNFGSSKSKSKLGFSSISSSPTRSFAKM-ASDHYTFGRYKI 60
          M+LRFQA RA L LT SSFL F    S  +LGF+SISSSPT+SF  M ASDHYTFGRYKI
Sbjct: 1  MVLRFQASRALLPLTPSSFLKF--CPSSIQLGFTSISSSPTKSFTIMAASDHYTFGRYKI 60

Query: 61 DPKEVFFCTGLSYAMVNLRPLLP 83
          DPKEVF+CT LSYAMVNLRPLLP
Sbjct: 61 DPKEVFYCTTLSYAMVNLRPLLP 81

[Close]

BLAST of Lag0017201 vs. ExPASy Swiss-Prot
Match: F4KEV7 (Bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT OS=Arabidopsis thaliana OX=3702 GN=FHIT PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.4e-08
Identity = 30/46 (65.22%), Postives = 33/46 (71.74%), Query Frame = 0


Query: 39 SPTRSFAKMAS--DHYTFGRYKIDPKEVFFCTGLSYAMVNLRPLLP 83
          S  R   KM+S    Y FG YKIDP+EVF+ T LSYAMVNLRPLLP
Sbjct: 13 SSIRCQRKMSSTCSSYAFGPYKIDPREVFYATPLSYAMVNLRPLLP 58

The following BLAST results are available for this feature:

BLAST of Lag0017201 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876562.1	4.2e-25	79.52	bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT isoform X1 [...	[more]
XP_038876563.1	4.2e-25	79.52	bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT isoform X2 [...	[more]
TYK11419.1	5.7e-22	69.47	bis(5'-adenosyl)-triphosphatase isoform X1 [Cucumis melo var. makuwa]	[more]
XP_016900576.1	1.7e-21	76.19	PREDICTED: bis(5'-adenosyl)-triphosphatase isoform X1 [Cucumis melo]	[more]
XP_008448553.1	8.3e-21	75.90	PREDICTED: bis(5'-adenosyl)-triphosphatase isoform X2 [Cucumis melo]	[more]

BLAST of Lag0017201 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4KEV7	6.4e-08	65.22	Bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT OS=Arabidops...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036265	HIT-like superfamily	GENE3D	3.30.428.10		coord: 25..93 e-value: 1.4E-6 score: 29.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0017201.1	Lag0017201.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0047627	adenylylsulfatase activity
molecular_function	GO:0047710	bis(5'-adenosyl)-triphosphatase activity
molecular_function	GO:0000166	nucleotide binding