Lag0017136 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGGCGGTAAATCCAAGGCGGCGCCTAAGAAGGCGGATACCAAGTGAGTTCTTCGATAGCTTATGATTTTTTGTGCGTTTTGTGTGATAGTATGTTTAGGAGTAGGCGGTTCGATCATACGCGTGCGCTGTTGTTATTTTGTTTTCAATCTGTTCATAGTGTGTTTTTTTTTTTGGTGCGCGTTGTTATTTAATTTTTGCTAGGTTGAAGAGCAAAAGTGCTGGTGCTAGTAAGAAATCAGCGAAGGCTGCGAAAGATCCTAACAAGCCAAAGAGGCCTGCCAGTGCTTTCTTTGTTTTCATGTATCTCTCTTTCTCTCTGGCTTATCCTGCTTTTTTTAAAATTTTCAGATCCGTGTGCTTTTACCGTCTAGGTCATTTTTCGTACCGAATTTTTACTGTTTGATGATTTTTGTTCATGAATATGAAGGGAGGAGTTCAGGAAGCAGTATAAGAAGGAGCATCCTAATAACAAATCTGTCGCCGCTGTAAGTGATTCTAGATCTGCGTACTGTTTTTCTTCTCGTTATTCTTTACGAAATTCATAGAGTTTTTTAACGCGTGCTCCTTTGGTCAAATAAACAGGTTGGAAAGGCCGGCGGTGACAAATGGAAGTCAATGTCAGACGCTGTAAGTAATTGGATTGAAATTGGTATTCTTTTTTCCTGTGTTGCGGAAATTGTATCAAATTACATGTTCTCATCTGTTTCCTCTTCTGTTTTTCAGGAGAAAGCGCCTTACATAAACAAGGCTGAGAAAAGGAAGACCGAGTACAATAAGAGCATGCAGGCTTATAATAAGAGAATTGTATGCTCAGTTATCCCTATTTCATGTCCAATATATATTCTCACATCCATTAATCTCATCCACGTTAATTGTGTGCTTTTCTGTCAGGCGGAAGGAGGTAATGGGGCTGAAGAAGAAGAATCTGATAAATCCAAATCAGAAGTCAATGATGATGAAGAGGATGACGATGAGAGTGGAGAGGTTTGTGAACAAGTTTTGCTTGAAGTATGTATTTCGAGCTAGAAAACGAAGTAGTAAATGGCTGATGATCTTTGATTTTGACATTGCAGGAGGAAGATGATGAGTAA ATGAAGGGCGGTAAATCCAAGGCGGCGCCTAAGAAGGCGGATACCAAGTTGAAGAGCAAAAGTGCTGGTGCTAGTAAGAAATCAGCGAAGGCTGCGAAAGATCCTAACAAGCCAAAGAGGCCTGCCAGTGCTTTCTTTGTTTTCATGGAGGAGTTCAGGAAGCAGTATAAGAAGGAGCATCCTAATAACAAATCTGTCGCCGCTGTTGGAAAGGCCGGCGGTGACAAATGGAAGTCAATGTCAGACGCTGAGAAAGCGCCTTACATAAACAAGGCTGAGAAAAGGAAGACCGAGTACAATAAGAGCATGCAGGCTTATAATAAGAGAATTGCGGAAGGAGGTAATGGGGCTGAAGAAGAAGAATCTGATAAATCCAAATCAGAAGTCAATGATGATGAAGAGGATGACGATGAGAGTGGAGAGGAGGAAGATGATGAGTAA ATGAAGGGCGGTAAATCCAAGGCGGCGCCTAAGAAGGCGGATACCAAGTTGAAGAGCAAAAGTGCTGGTGCTAGTAAGAAATCAGCGAAGGCTGCGAAAGATCCTAACAAGCCAAAGAGGCCTGCCAGTGCTTTCTTTGTTTTCATGGAGGAGTTCAGGAAGCAGTATAAGAAGGAGCATCCTAATAACAAATCTGTCGCCGCTGTTGGAAAGGCCGGCGGTGACAAATGGAAGTCAATGTCAGACGCTGAGAAAGCGCCTTACATAAACAAGGCTGAGAAAAGGAAGACCGAGTACAATAAGAGCATGCAGGCTTATAATAAGAGAATTGCGGAAGGAGGTAATGGGGCTGAAGAAGAAGAATCTGATAAATCCAAATCAGAAGTCAATGATGATGAAGAGGATGACGATGAGAGTGGAGAGGAGGAAGATGATGAGTAA MKGGKSKAAPKKADTKLKSKSAGASKKSAKAAKDPNKPKRPASAFFVFMEEFRKQYKKEHPNNKSVAAVGKAGGDKWKSMSDAEKAPYINKAEKRKTEYNKSMQAYNKRIAEGGNGAEEEESDKSKSEVNDDEEDDDESGEEEDDE Homology
BLAST of Lag0017136 vs. NCBI nr
Match: XP_038904814.1 (HMG1/2-like protein [Benincasa hispida]) HSP 1 Score: 250.0 bits (637), Expect = 1.3e-62 Identity = 143/146 (97.95%), Postives = 145/146 (99.32%), Query Frame = 0
BLAST of Lag0017136 vs. NCBI nr
Match: NP_001267705.1 (HMG1/2-like protein-like [Cucumis sativus] >XP_008448477.1 PREDICTED: HMG1/2-like protein [Cucumis melo] >AAY26151.1 high mobility group protein [Cucumis sativus] >KAE8649989.1 hypothetical protein Csa_010903 [Cucumis sativus]) HSP 1 Score: 248.4 bits (633), Expect = 3.7e-62 Identity = 142/146 (97.26%), Postives = 144/146 (98.63%), Query Frame = 0
BLAST of Lag0017136 vs. NCBI nr
Match: XP_022145438.1 (HMG1/2-like protein [Momordica charantia]) HSP 1 Score: 241.5 bits (615), Expect = 4.5e-60 Identity = 138/146 (94.52%), Postives = 143/146 (97.95%), Query Frame = 0
BLAST of Lag0017136 vs. NCBI nr
Match: KAG6596275.1 (hypothetical protein SDJN03_09455, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 236.9 bits (603), Expect = 1.1e-58 Identity = 133/146 (91.10%), Postives = 145/146 (99.32%), Query Frame = 0
BLAST of Lag0017136 vs. NCBI nr
Match: XP_022947889.1 (HMG1/2-like protein [Cucurbita moschata] >XP_023539853.1 HMG1/2-like protein [Cucurbita pepo subsp. pepo] >KAG7027826.1 hypothetical protein SDJN02_09003 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 236.9 bits (603), Expect = 1.1e-58 Identity = 133/146 (91.10%), Postives = 145/146 (99.32%), Query Frame = 0
BLAST of Lag0017136 vs. ExPASy Swiss-Prot
Match: P26585 (HMG1/2-like protein OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 2.1e-39 Identity = 100/152 (65.79%), Postives = 120/152 (78.95%), Query Frame = 0
BLAST of Lag0017136 vs. ExPASy Swiss-Prot
Match: P40619 (HMG1/2-like protein OS=Ipomoea nil OX=35883 PE=2 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 1.3e-38 Identity = 101/147 (68.71%), Postives = 120/147 (81.63%), Query Frame = 0
BLAST of Lag0017136 vs. ExPASy Swiss-Prot
Match: P93047 (High mobility group B protein 3 OS=Arabidopsis thaliana OX=3702 GN=HMGB3 PE=1 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 2.6e-34 Identity = 93/146 (63.70%), Postives = 114/146 (78.08%), Query Frame = 0
BLAST of Lag0017136 vs. ExPASy Swiss-Prot
Match: O49596 (High mobility group B protein 2 OS=Arabidopsis thaliana OX=3702 GN=HMGB2 PE=1 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 7.6e-34 Identity = 90/146 (61.64%), Postives = 113/146 (77.40%), Query Frame = 0
BLAST of Lag0017136 vs. ExPASy Swiss-Prot
Match: P40620 (HMG1/2-like protein OS=Vicia faba OX=3906 PE=2 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.1e-32 Identity = 93/152 (61.18%), Postives = 119/152 (78.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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