
Lag0017130 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATTCAAAATCTTTAAAGCCATAAGAGATTGTCTCGGGGGATTCATTGAATATTTTGAAGTCAACTCTTTGCTCGTCTACTGTGTGGGCGCGGGTCTAAGAATCCGTGATAATTACTATGGCTTCATCCCCGCTGAAGTTAATATCGTAGAGGGAGACATGAACTTTAAGGTGCAGATTGTAACTTTCCAAGATGGTAACAAGCTTGTGGACAGAACCGCTGGAATACATGGAAGCTTCTTGCCGACGACAACCCATTTTTTTCATAGAGGACCAACAAATCCCAACTTTAGCCCAGTGGATAAATGGAGAATAGAAAATGGTCTTGAGTGCCCAATGATTAATGCCCATAGTTACTCACAGGCATAG ATGGCATTCAAAATCTTTAAAGCCATAAGAGATTGTCTCGGGGGATTCATTGAATATTTTGAAGTCAACTCTTTGCTCGTCTACTGTGTGGGCGCGGGTCTAAGAATCCGTGATAATTACTATGGCTTCATCCCCGCTGAAGTTAATATCGTAGAGGGAGACATGAACTTTAAGGTGCAGATTGTAACTTTCCAAGATGGTAACAAGCTTGTGGACAGAACCGCTGGAATACATGGAAGCTTCTTGCCGACGACAACCCATTTTTTTCATAGAGGACCAACAAATCCCAACTTTAGCCCAGTGGATAAATGGAGAATAGAAAATGGTCTTGAGTGCCCAATGATTAATGCCCATAGTTACTCACAGGCATAG ATGGCATTCAAAATCTTTAAAGCCATAAGAGATTGTCTCGGGGGATTCATTGAATATTTTGAAGTCAACTCTTTGCTCGTCTACTGTGTGGGCGCGGGTCTAAGAATCCGTGATAATTACTATGGCTTCATCCCCGCTGAAGTTAATATCGTAGAGGGAGACATGAACTTTAAGGTGCAGATTGTAACTTTCCAAGATGGTAACAAGCTTGTGGACAGAACCGCTGGAATACATGGAAGCTTCTTGCCGACGACAACCCATTTTTTTCATAGAGGACCAACAAATCCCAACTTTAGCCCAGTGGATAAATGGAGAATAGAAAATGGTCTTGAGTGCCCAATGATTAATGCCCATAGTTACTCACAGGCATAG MAFKIFKAIRDCLGGFIEYFEVNSLLVYCVGAGLRIRDNYYGFIPAEVNIVEGDMNFKVQIVTFQDGNKLVDRTAGIHGSFLPTTTHFFHRGPTNPNFSPVDKWRIENGLECPMINAHSYSQA Homology
BLAST of Lag0017130 vs. NCBI nr
Match: XP_022149859.1 (uncharacterized protein LOC111018186 [Momordica charantia] >XP_022149860.1 uncharacterized protein LOC111018186 [Momordica charantia]) HSP 1 Score: 106.3 bits (264), Expect = 1.9e-19 Identity = 43/111 (38.74%), Postives = 69/111 (62.16%), Query Frame = 0
BLAST of Lag0017130 vs. NCBI nr
Match: XP_031741396.1 (general transcription factor IIF subunit 2 isoform X2 [Cucumis sativus]) HSP 1 Score: 62.0 bits (149), Expect = 4.1e-06 Identity = 25/56 (44.64%), Postives = 37/56 (66.07%), Query Frame = 0
BLAST of Lag0017130 vs. NCBI nr
Match: TYK01560.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 59.3 bits (142), Expect = 2.7e-05 Identity = 24/63 (38.10%), Postives = 41/63 (65.08%), Query Frame = 0
BLAST of Lag0017130 vs. NCBI nr
Match: TYK03139.1 (hypothetical protein E5676_scaffold11G00140 [Cucumis melo var. makuwa]) HSP 1 Score: 58.9 bits (141), Expect = 3.5e-05 Identity = 33/101 (32.67%), Postives = 50/101 (49.50%), Query Frame = 0
BLAST of Lag0017130 vs. NCBI nr
Match: KAA0046763.1 (hypothetical protein E6C27_scaffold216G00460 [Cucumis melo var. makuwa]) HSP 1 Score: 58.2 bits (139), Expect = 6.0e-05 Identity = 30/79 (37.97%), Postives = 43/79 (54.43%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|