Lag0016900 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTTTCTCCATAAGCTCTGGGACGAAACCCTCGCCGGTCCGCCGCCCGATTCCGGCCTCAGTCGCCTCCGTAAGTACAATTCCTTCTCCGCCTCCAGATCTCCGCCGATGTTATCCAACGACCTCGTCTCCAGTCTTCCTCGCAGCATCCAAATCCCTAGCCCTACGCTCTCTCAGTCCCAGACCTCCTTCCCTGAGTCGCCGATCTCCTCATCCACGCCGCGGACTCCACCGCCCACACGTAAGTCGTCTAATTAATCTTTCTCTTCGAATCCGATCGAATCTGTTGATTTTGATCGAATCGTTATTGGCGTTGATGCAGCGCCAGAGACGCCGCGAGGGGACGATTTGAAGAGACTGACGACGCGAAGATCCATCGATTATCCTCGCCGCCGCCCTATGGAAGGACCTGAACGAACTACCCCTTCTGTTTATGATTGGTCAGTTTTTTCCAATTTTTTGTAAACATAAATAAGAATATAAGTTTATCATTATTGATGATATAGGTGTTAGAGAAACAGAAACAAGAAACGAGAACGTTATCAAACCGTCTTTATAAACTTTATGTTTAATAAATTTGATAATTTAAGATCGAACTTATTTTGTTGACCTTTTTTTTCTTTGTTATATAGGATTGTTATAACAGCTTTAGATCGTTGA ATGAGTTTTCTCCATAAGCTCTGGGACGAAACCCTCGCCGGTCCGCCGCCCGATTCCGGCCTCAGTCGCCTCCGTAAGTACAATTCCTTCTCCGCCTCCAGATCTCCGCCGATGTTATCCAACGACCTCGTCTCCAGTCTTCCTCGCAGCATCCAAATCCCTAGCCCTACGCTCTCTCAGTCCCAGACCTCCTTCCCTGAGTCGCCGATCTCCTCATCCACGCCGCGGACTCCACCGCCCACACCGCCAGAGACGCCGCGAGGGGACGATTTGAAGAGACTGACGACGCGAAGATCCATCGATTATCCTCGCCGCCGCCCTATGGAAGGACCTGAACGAACTACCCCTTCTGTTTATGATTGGATTGTTATAACAGCTTTAGATCGTTGA ATGAGTTTTCTCCATAAGCTCTGGGACGAAACCCTCGCCGGTCCGCCGCCCGATTCCGGCCTCAGTCGCCTCCGTAAGTACAATTCCTTCTCCGCCTCCAGATCTCCGCCGATGTTATCCAACGACCTCGTCTCCAGTCTTCCTCGCAGCATCCAAATCCCTAGCCCTACGCTCTCTCAGTCCCAGACCTCCTTCCCTGAGTCGCCGATCTCCTCATCCACGCCGCGGACTCCACCGCCCACACCGCCAGAGACGCCGCGAGGGGACGATTTGAAGAGACTGACGACGCGAAGATCCATCGATTATCCTCGCCGCCGCCCTATGGAAGGACCTGAACGAACTACCCCTTCTGTTTATGATTGGATTGTTATAACAGCTTTAGATCGTTGA MSFLHKLWDETLAGPPPDSGLSRLRKYNSFSASRSPPMLSNDLVSSLPRSIQIPSPTLSQSQTSFPESPISSSTPRTPPPTPPETPRGDDLKRLTTRRSIDYPRRRPMEGPERTTPSVYDWIVITALDR Homology
BLAST of Lag0016900 vs. NCBI nr
Match: XP_038878401.1 (dormancy-associated protein homolog 4-like [Benincasa hispida]) HSP 1 Score: 226.1 bits (575), Expect = 1.7e-55 Identity = 115/130 (88.46%), Postives = 123/130 (94.62%), Query Frame = 0
BLAST of Lag0016900 vs. NCBI nr
Match: XP_022955440.1 (dormancy-associated protein homolog 4-like [Cucurbita moschata] >KAG7018232.1 Dormancy-associated protein-like 4 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 209.5 bits (532), Expect = 1.7e-50 Identity = 107/129 (82.95%), Postives = 117/129 (90.70%), Query Frame = 0
BLAST of Lag0016900 vs. NCBI nr
Match: XP_023527038.1 (dormancy-associated protein homolog 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 207.6 bits (527), Expect = 6.4e-50 Identity = 108/130 (83.08%), Postives = 118/130 (90.77%), Query Frame = 0
BLAST of Lag0016900 vs. NCBI nr
Match: XP_022980753.1 (dormancy-associated protein homolog 4-like [Cucurbita maxima]) HSP 1 Score: 206.1 bits (523), Expect = 1.9e-49 Identity = 106/130 (81.54%), Postives = 118/130 (90.77%), Query Frame = 0
BLAST of Lag0016900 vs. NCBI nr
Match: XP_008460332.1 (PREDICTED: dormancy-associated protein homolog 4 [Cucumis melo]) HSP 1 Score: 193.7 bits (491), Expect = 9.6e-46 Identity = 105/138 (76.09%), Postives = 117/138 (84.78%), Query Frame = 0
BLAST of Lag0016900 vs. ExPASy Swiss-Prot
Match: F4HV65 (Dormancy-associated protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g54070 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.0e-10 Identity = 55/134 (41.04%), Postives = 70/134 (52.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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