Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCTCTCCGGGAAGAACAAGGATGGTTTCATCGATGGCATGATTACCAAACCTGCTTCGACTAAAATGGCTAGGGCATGAAAATGTAACAATGACATCATCGCATCATGGATTATGAATTCAGTTTCAAAGGAGATTGCAGTCAGGATAGTTTACACCGGATCTGTTAAAGATGTTTGGGACGAACTTGCTGATAGATTTAAGGAGAGCAATGGACCGAAAATCTATCAATTATGGAAGGAGTTAACCACTACCACTCAAGGTAATTTGTCTATTGAGGCTTCTCCCATGTTTGTGTTCGTCAGGCCCTTTCTTGAATTCATTCAATTAGATGTTAATGTAAATGAATCATAACTATGTAGTCCTATCCCTACTAGATTGACCCAAAAAATAGCATATCCAAATTATAAGAAAACCCATAGAGGCCACAATTGCAGAATTTACACCTTCAAAATTTTTATTTGTTTGCGTATGTAAATAAATTGCGAATATGGTTCAAGTAATAAATGCCCAAGTTTCCTTTGGGTCCCAATTCCAATATGATCCCCATGTCTCATGAGCCCATATTGCCCCTGAAAGAATACCTATGCTTAAAAAGATAAACCCTAGACTAATAATACGATAACTCCAATGATCTAATTGTTGAATCAGTTGAGACTTATAATAATTCTTTGAAGAAAAAAAAGAAGTGTTTCCTAAACCATTGTTTTTACGAAATTAAAGAATATATGGCAAGACCTCAATGATTTTCGCCCTAATATTGATTGTTCTTGCGGAAAGATTAAGGAATTTTTGTCGCATTTGGAATATGAATACATTATGATCTTCCCTATGGACCTCAATGATCAGTATGCTCCCATCCGTACACAAATTCTCTTAATGAATCTCATTCCTTCTATCAGTAAAGTCTTTGCTTTAGTTATTCAAGAGGAACGACAGAGGAATGCTGGAATTTCTATTCCAAAATCTGATCCGGTTGCAAAATCACTGCAAATAGTTTGAATGTGAAAAGGAATTCTTCACATAATTCTAATTCTCCACAAAACAAAGATAATTCCAGAGATGATCAACGACTAGTCTGTTCACATTAAAAGATTAAAGGTCATACGGTTGATAGGTGTTATAAAATTCATGGTTATCCACCGGGTTATAGGACACGAAATCAACATAACTCACAGACTATGAATGGTACGAATAATTCTTCTAAAGTTGTTGGTACTAAATCTGTTTCTCAGAATGCGCAACCTACTTCGGTTGAAGGGAATTTCTTTTCCAGTTTGAATGCTAGCCAATGCTCCCAACTTATGGAGCTTCTGTCTTCACATCTTCAAGATGCCAAAACTGAGTCGATAACAGTTGCTACAAGCTACTAA
mRNA sequence
ATGGCTCTCTCCGGGAAGAACAAGGATGTTTCAAAGGAGATTGCAGTCAGGATAGTTTACACCGGATCTGTTAAAGATGTTTGGGACGAACTTGCTGATAGATTTAAGGAGAGCAATGGACCGAAAATCTATCAATTATGGAAGGAGTTAACCACTACCACTCAAGGTAATTTGTCTATTGAGGCTTCTCCCATGTTTGTGTTCGTCAGGCCCTTTCTTGAATTCATTCAATTAGATGTTAATAATATATGGCAAGACCTCAATGATTTTCGCCCTAATATTGATTGTTCTTGCGGAAAGATTAAGGAATTTTTGTCGCATTTGGAATATGAATACATTATGATCTTCCCTATGGACCTCAATGATCAGTATGCTCCCATCCGTACACAAATTCTCTTAATGAATCTCATTCCTTCTATCAGTAAAGTCTTTGCTTTAGTTATTCAAGAGGAACGACAGAGGAATGCTGGAATTTCTATTCCAAAATCTGATCCGAATGCGCAACCTACTTCGGTTGAAGGGAATTTCTTTTCCAGTTTGAATGCTAGCCAATGCTCCCAACTTATGGAGCTTCTGTCTTCACATCTTCAAGATGCCAAAACTGAGTCGATAACAGTTGCTACAAGCTACTAA
Coding sequence (CDS)
ATGGCTCTCTCCGGGAAGAACAAGGATGTTTCAAAGGAGATTGCAGTCAGGATAGTTTACACCGGATCTGTTAAAGATGTTTGGGACGAACTTGCTGATAGATTTAAGGAGAGCAATGGACCGAAAATCTATCAATTATGGAAGGAGTTAACCACTACCACTCAAGGTAATTTGTCTATTGAGGCTTCTCCCATGTTTGTGTTCGTCAGGCCCTTTCTTGAATTCATTCAATTAGATGTTAATAATATATGGCAAGACCTCAATGATTTTCGCCCTAATATTGATTGTTCTTGCGGAAAGATTAAGGAATTTTTGTCGCATTTGGAATATGAATACATTATGATCTTCCCTATGGACCTCAATGATCAGTATGCTCCCATCCGTACACAAATTCTCTTAATGAATCTCATTCCTTCTATCAGTAAAGTCTTTGCTTTAGTTATTCAAGAGGAACGACAGAGGAATGCTGGAATTTCTATTCCAAAATCTGATCCGAATGCGCAACCTACTTCGGTTGAAGGGAATTTCTTTTCCAGTTTGAATGCTAGCCAATGCTCCCAACTTATGGAGCTTCTGTCTTCACATCTTCAAGATGCCAAAACTGAGTCGATAACAGTTGCTACAAGCTACTAA
Protein sequence
MALSGKNKDVSKEIAVRIVYTGSVKDVWDELADRFKESNGPKIYQLWKELTTTTQGNLSIEASPMFVFVRPFLEFIQLDVNNIWQDLNDFRPNIDCSCGKIKEFLSHLEYEYIMIFPMDLNDQYAPIRTQILLMNLIPSISKVFALVIQEERQRNAGISIPKSDPNAQPTSVEGNFFSSLNASQCSQLMELLSSHLQDAKTESITVATSY
Homology
BLAST of Lag0016785 vs. NCBI nr
Match:
KAA0065480.1 (Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa] >TYK08721.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa])
HSP 1 Score: 175.3 bits (443), Expect = 5.7e-40
Identity = 111/270 (41.11%), Postives = 139/270 (51.48%), Query Frame = 0
Query: 10 VSKEIAVRIVYTGSVKDVWDELADRFKESNGPKIYQLWKELTTTTQGNLSIEASPMFVFV 69
VSKEIA I+Y GS+K++WDEL RFK+SNGP IYQL KE T QGNL+IE
Sbjct: 103 VSKEIAASIIYIGSIKEIWDELRQRFKQSNGPSIYQLRKEFVTLRQGNLTIET------- 162
Query: 70 RPFLEFIQLDVNNIWQDLNDFRPNIDCSCGKIKEFLSHLEYEYIMIFPMDLNDQYAPIRT 129
+ IWQ+LN++R DC+CG +K F+ HLE EYIM F M LND YA +R
Sbjct: 163 ------YYTKLKTIWQNLNEYRFTNDCTCGGLKPFIDHLESEYIMAFLMGLNDSYAAVRA 222
Query: 130 QILLMNLIPSISKVFALVIQEERQRNAGISIPKSDPNA------------------QPT- 189
QILLM +PSI+ VF+L+IQEE+QR+AGI P DP A +PT
Sbjct: 223 QILLMQPLPSINTVFSLLIQEEQQRSAGILTPPIDPVALNIASSMAISTDRNRKKERPTC 282
Query: 190 ---SVEG------------------------------------------------NFFSS 210
++G +FFSS
Sbjct: 283 SYCGIKGHIADKCYKKHGYPPGYKPRNSNSITTAPDTSKTNNVANTNSAAANRSPDFFSS 342
BLAST of Lag0016785 vs. NCBI nr
Match:
XP_022145891.1 (uncharacterized protein LOC111015239 [Momordica charantia])
HSP 1 Score: 157.5 bits (397), Expect = 1.2e-34
Identity = 102/286 (35.66%), Postives = 132/286 (46.15%), Query Frame = 0
Query: 10 VSKEIAVRIVYTGSVKDVWDELADRFKESNGPKIYQLWKELTTTTQGNLSIEASPMFVFV 69
VSKEIA I+YTGS KD+WDEL +RF++S+ P+I+QL KEL TT QG LSIEA
Sbjct: 101 VSKEIAASIIYTGSAKDIWDELKERFQQSDAPRIFQLRKELVTTIQGTLSIEA------- 160
Query: 70 RPFLEFIQLDVNNIWQDLNDFRPNIDCSCGKIKEFLSHLEYEYIMIFPMDLNDQYAPIRT 129
+ +WQ+L D+RP IDC+C +K + EY+M F M LN+ YA IR
Sbjct: 161 ------YYTKLKTVWQELTDYRPTIDCTCSGLKSLSEFFQSEYVMTFLMGLNESYAKIRA 220
Query: 130 QILLMNLIPSISKVFALVIQEERQRNAG-------------------------------- 189
QILLM+ IP ++KVF+L+IQEERQR G
Sbjct: 221 QILLMDPIPPMNKVFSLLIQEERQRAIGTINPPLPSMAMAVAEISKRNSATQFRRKDNRS 280
Query: 190 ----------------------------------------------------------IS 206
+
Sbjct: 281 FCTHCGLRGHVIDKCYKLHGYPPGYRANNPAARIGQLHNPNGTSHSNGVVANQVSEKNVD 340
BLAST of Lag0016785 vs. NCBI nr
Match:
XP_015936173.1 (uncharacterized protein LOC107462121 [Arachis duranensis])
HSP 1 Score: 137.1 bits (344), Expect = 1.7e-28
Identity = 69/170 (40.59%), Postives = 107/170 (62.94%), Query Frame = 0
Query: 10 VSKEIAVRIVYTGSVKDVWDELADRFKESNGPKIYQLWKELTTTTQGNLSIEASPMFVFV 69
VSKEIA +++ GS ++W +L RF++ NGP+IY+L KEL Q +LS+ S F
Sbjct: 86 VSKEIASSLIFAGSAHEIWIDLGHRFQQKNGPRIYELRKELINLKQDSLSV--SQFFT-- 145
Query: 70 RPFLEFIQLDVNNIWQDLNDFRPNIDCSCGKIKEFLSHLEYEYIMIFPMDLNDQYAPIRT 129
+ +W++L FRP++ C+CG +EFL+H + EY+++F M LND Y +R+
Sbjct: 146 ---------KLKCVWEELYHFRPSVRCNCGGAREFLAHADEEYVLVFLMGLNDVYHQVRS 205
Query: 130 QILLMNLIPSISKVFALVIQEERQRNAGISIPKSDPNAQPTSVEGNFFSS 180
QILLM +PSIS+VF+L++QEE QR ++ P S+ +V+ F+S
Sbjct: 206 QILLMKPLPSISEVFSLIVQEEWQRGLTLAPPTSNEMQLAFAVKNTHFNS 242
BLAST of Lag0016785 vs. NCBI nr
Match:
XP_016191419.1 (uncharacterized protein LOC107632230 [Arachis ipaensis])
HSP 1 Score: 136.3 bits (342), Expect = 2.9e-28
Identity = 69/170 (40.59%), Postives = 107/170 (62.94%), Query Frame = 0
Query: 10 VSKEIAVRIVYTGSVKDVWDELADRFKESNGPKIYQLWKELTTTTQGNLSIEASPMFVFV 69
VSKEIA +++ GS ++W +L RF++ N P+IY+L KEL Q +LSI S F
Sbjct: 86 VSKEIASSLIFAGSAHEIWIDLGHRFQQKNRPRIYELRKELINLKQDSLSI--SQFFT-- 145
Query: 70 RPFLEFIQLDVNNIWQDLNDFRPNIDCSCGKIKEFLSHLEYEYIMIFPMDLNDQYAPIRT 129
+ +W++L FRP++ C+CG +EFL+H + EY+++F M LND Y +R+
Sbjct: 146 ---------KLKCVWEELCHFRPSVHCNCGGAREFLAHADEEYVLVFLMGLNDVYHQVRS 205
Query: 130 QILLMNLIPSISKVFALVIQEERQRNAGISIPKSDPNAQPTSVEGNFFSS 180
QILLM +PSIS+VF+L++QEERQR ++ P S+ +V+ ++S
Sbjct: 206 QILLMKPLPSISEVFSLIVQEERQRGLTLAPPTSNETQLAFAVKNTQYNS 242
BLAST of Lag0016785 vs. NCBI nr
Match:
XP_016199461.1 (uncharacterized protein LOC107640454 [Arachis ipaensis])
HSP 1 Score: 133.7 bits (335), Expect = 1.9e-27
Identity = 70/154 (45.45%), Postives = 97/154 (62.99%), Query Frame = 0
Query: 10 VSKEIAVRIVYTGSVKDVWDELADRFKESNGPKIYQLWKELTTTTQGNLSIEASPMFVFV 69
+SK+IA ++Y GS +W +L RF +SNGP+I++L K L T TQGNLS+ S F
Sbjct: 91 ISKDIAASVIYAGSAALLWQDLETRFSQSNGPRIFELKKALVTLTQGNLSV--SQYFT-- 150
Query: 70 RPFLEFIQLDVNNIWQDLNDFRPNIDCSCGKIKEFLSHLEYEYIMIFPMDLNDQYAPIRT 129
+ IW++ N FRP C+CG K F SHL+ E+++ F M LND ++ IR
Sbjct: 151 ---------KLKTIWEEFNTFRPLAMCTCGGAKAFQSHLDQEHVLFFLMGLNDSFSNIRG 210
Query: 130 QILLMNLIPSISKVFALVIQEERQRNAGI--SIP 162
QILL + +P I K+F+LV+QEERQR G+ SIP
Sbjct: 211 QILLSDPLPPILKIFSLVLQEERQRAIGMANSIP 231
BLAST of Lag0016785 vs. ExPASy TrEMBL
Match:
A0A5A7VE66 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76G00250 PE=4 SV=1)
HSP 1 Score: 175.3 bits (443), Expect = 2.8e-40
Identity = 111/270 (41.11%), Postives = 139/270 (51.48%), Query Frame = 0
Query: 10 VSKEIAVRIVYTGSVKDVWDELADRFKESNGPKIYQLWKELTTTTQGNLSIEASPMFVFV 69
VSKEIA I+Y GS+K++WDEL RFK+SNGP IYQL KE T QGNL+IE
Sbjct: 103 VSKEIAASIIYIGSIKEIWDELRQRFKQSNGPSIYQLRKEFVTLRQGNLTIET------- 162
Query: 70 RPFLEFIQLDVNNIWQDLNDFRPNIDCSCGKIKEFLSHLEYEYIMIFPMDLNDQYAPIRT 129
+ IWQ+LN++R DC+CG +K F+ HLE EYIM F M LND YA +R
Sbjct: 163 ------YYTKLKTIWQNLNEYRFTNDCTCGGLKPFIDHLESEYIMAFLMGLNDSYAAVRA 222
Query: 130 QILLMNLIPSISKVFALVIQEERQRNAGISIPKSDPNA------------------QPT- 189
QILLM +PSI+ VF+L+IQEE+QR+AGI P DP A +PT
Sbjct: 223 QILLMQPLPSINTVFSLLIQEEQQRSAGILTPPIDPVALNIASSMAISTDRNRKKERPTC 282
Query: 190 ---SVEG------------------------------------------------NFFSS 210
++G +FFSS
Sbjct: 283 SYCGIKGHIADKCYKKHGYPPGYKPRNSNSITTAPDTSKTNNVANTNSAAANRSPDFFSS 342
BLAST of Lag0016785 vs. ExPASy TrEMBL
Match:
A0A6J1CXR2 (uncharacterized protein LOC111015239 OS=Momordica charantia OX=3673 GN=LOC111015239 PE=4 SV=1)
HSP 1 Score: 157.5 bits (397), Expect = 6.0e-35
Identity = 102/286 (35.66%), Postives = 132/286 (46.15%), Query Frame = 0
Query: 10 VSKEIAVRIVYTGSVKDVWDELADRFKESNGPKIYQLWKELTTTTQGNLSIEASPMFVFV 69
VSKEIA I+YTGS KD+WDEL +RF++S+ P+I+QL KEL TT QG LSIEA
Sbjct: 101 VSKEIAASIIYTGSAKDIWDELKERFQQSDAPRIFQLRKELVTTIQGTLSIEA------- 160
Query: 70 RPFLEFIQLDVNNIWQDLNDFRPNIDCSCGKIKEFLSHLEYEYIMIFPMDLNDQYAPIRT 129
+ +WQ+L D+RP IDC+C +K + EY+M F M LN+ YA IR
Sbjct: 161 ------YYTKLKTVWQELTDYRPTIDCTCSGLKSLSEFFQSEYVMTFLMGLNESYAKIRA 220
Query: 130 QILLMNLIPSISKVFALVIQEERQRNAG-------------------------------- 189
QILLM+ IP ++KVF+L+IQEERQR G
Sbjct: 221 QILLMDPIPPMNKVFSLLIQEERQRAIGTINPPLPSMAMAVAEISKRNSATQFRRKDNRS 280
Query: 190 ----------------------------------------------------------IS 206
+
Sbjct: 281 FCTHCGLRGHVIDKCYKLHGYPPGYRANNPAARIGQLHNPNGTSHSNGVVANQVSEKNVD 340
BLAST of Lag0016785 vs. ExPASy TrEMBL
Match:
A0A6P4C265 (uncharacterized protein LOC107462121 OS=Arachis duranensis OX=130453 GN=LOC107462121 PE=4 SV=1)
HSP 1 Score: 137.1 bits (344), Expect = 8.4e-29
Identity = 69/170 (40.59%), Postives = 107/170 (62.94%), Query Frame = 0
Query: 10 VSKEIAVRIVYTGSVKDVWDELADRFKESNGPKIYQLWKELTTTTQGNLSIEASPMFVFV 69
VSKEIA +++ GS ++W +L RF++ NGP+IY+L KEL Q +LS+ S F
Sbjct: 86 VSKEIASSLIFAGSAHEIWIDLGHRFQQKNGPRIYELRKELINLKQDSLSV--SQFFT-- 145
Query: 70 RPFLEFIQLDVNNIWQDLNDFRPNIDCSCGKIKEFLSHLEYEYIMIFPMDLNDQYAPIRT 129
+ +W++L FRP++ C+CG +EFL+H + EY+++F M LND Y +R+
Sbjct: 146 ---------KLKCVWEELYHFRPSVRCNCGGAREFLAHADEEYVLVFLMGLNDVYHQVRS 205
Query: 130 QILLMNLIPSISKVFALVIQEERQRNAGISIPKSDPNAQPTSVEGNFFSS 180
QILLM +PSIS+VF+L++QEE QR ++ P S+ +V+ F+S
Sbjct: 206 QILLMKPLPSISEVFSLIVQEEWQRGLTLAPPTSNEMQLAFAVKNTHFNS 242
BLAST of Lag0016785 vs. ExPASy TrEMBL
Match:
A0A2N9HKE6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40300 PE=3 SV=1)
HSP 1 Score: 135.2 bits (339), Expect = 3.2e-28
Identity = 67/172 (38.95%), Postives = 109/172 (63.37%), Query Frame = 0
Query: 1 MALSGKNKDVSKEIAVRIVYTGSVKDVWDELADRFKESNGPKIYQLWKELTTTTQGNLSI 60
M +S +SKEIA ++Y + K++W++L +RF + NGP+I+++ K ++ +Q N S+
Sbjct: 511 MVISWLLNSLSKEIASSVIYANTAKEIWEDLRERFAQGNGPRIFEIQKSISVLSQDNSSV 570
Query: 61 EASPMFVFVRPFLEFIQLDVNNIWQDLNDFRPNIDCSCGKIKEFLSHLEYEYIMIFPMDL 120
+ + R + ++W +L++FRP DCSCG +K L + ++EY+M F M L
Sbjct: 571 SS----YYTR---------LKSLWDELSNFRPIPDCSCGAMKVLLDNKQHEYVMQFLMGL 630
Query: 121 NDQYAPIRTQILLMNLIPSISKVFALVIQEERQRNAGISIPKSDPNAQPTSV 173
ND ++ +R QIL+ + +PSI+K FALVIQEERQRN I+IP P A ++
Sbjct: 631 NDSFSHVRAQILMTDPLPSITKAFALVIQEERQRN--INIPSLAPAADSVAL 667
BLAST of Lag0016785 vs. ExPASy TrEMBL
Match:
A0A2N9GZW3 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33057 PE=4 SV=1)
HSP 1 Score: 135.2 bits (339), Expect = 3.2e-28
Identity = 67/172 (38.95%), Postives = 109/172 (63.37%), Query Frame = 0
Query: 1 MALSGKNKDVSKEIAVRIVYTGSVKDVWDELADRFKESNGPKIYQLWKELTTTTQGNLSI 60
M +S +SKEIA ++Y + K++W++L +RF + NGP+I+++ K ++ +Q N S+
Sbjct: 511 MVISWLLNSLSKEIASSVIYANTAKEIWEDLRERFAQGNGPRIFEIQKSISVLSQDNSSV 570
Query: 61 EASPMFVFVRPFLEFIQLDVNNIWQDLNDFRPNIDCSCGKIKEFLSHLEYEYIMIFPMDL 120
+ + R + ++W +L++FRP DCSCG +K L + ++EY+M F M L
Sbjct: 571 SS----YYTR---------LKSLWDELSNFRPIPDCSCGAMKVLLDNKQHEYVMQFLMGL 630
Query: 121 NDQYAPIRTQILLMNLIPSISKVFALVIQEERQRNAGISIPKSDPNAQPTSV 173
ND ++ +R QIL+ + +PSI+K FALVIQEERQRN I+IP P A ++
Sbjct: 631 NDSFSHVRAQILMTDPLPSITKAFALVIQEERQRN--INIPSLAPAADSVAL 667
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0065480.1 | 5.7e-40 | 41.11 | Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa] >T... | [more] |
XP_022145891.1 | 1.2e-34 | 35.66 | uncharacterized protein LOC111015239 [Momordica charantia] | [more] |
XP_015936173.1 | 1.7e-28 | 40.59 | uncharacterized protein LOC107462121 [Arachis duranensis] | [more] |
XP_016191419.1 | 2.9e-28 | 40.59 | uncharacterized protein LOC107632230 [Arachis ipaensis] | [more] |
XP_016199461.1 | 1.9e-27 | 45.45 | uncharacterized protein LOC107640454 [Arachis ipaensis] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7VE66 | 2.8e-40 | 41.11 | Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa O... | [more] |
A0A6J1CXR2 | 6.0e-35 | 35.66 | uncharacterized protein LOC111015239 OS=Momordica charantia OX=3673 GN=LOC111015... | [more] |
A0A6P4C265 | 8.4e-29 | 40.59 | uncharacterized protein LOC107462121 OS=Arachis duranensis OX=130453 GN=LOC10746... | [more] |
A0A2N9HKE6 | 3.2e-28 | 38.95 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40300 PE=3 SV=1 | [more] |
A0A2N9GZW3 | 3.2e-28 | 38.95 | Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB... | [more] |
Match Name | E-value | Identity | Description | |