Lag0016686 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0016686
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Glucose-1-phosphate adenylyltransferase
Location	chr12: 40282022 .. 40282942 (+)
RNA-Seq Expression	Lag0016686
Synteny	Lag0016686

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGCCTGCGCCGATGGCCGAGTTTCGCTCTCGGCGGCTGCGAACTTGCACGGTGCAATGGCATTGCAGAAAACCAGAAACTCGAAGCTGCAGGTGAGGTTCTGTAACGGAGAATTTATGGGGAAGAAGCTAGTTGCATTGCAACGGAGGAAGCAAGATGTTACTGACATTCCAAATGCCAGACGGAAAGTTTGTATGTCTCTTATTGCCAATATAGCGGCTGAATCCAAGGCAAGCTAATGATGCAAGTCTCTTTCGAAAATTTTGTTGAATATGTTTTTGGAAAAGAATCTGCGAACTTCTGGACTGGAATTTGAGGTTTTGGCGGTGGTTTAATGTTGTAGTTGAGGGAATTGAACATGGAGAAACGTGACCCGAGGACGGTGGTGGCGGTTATATTGGGAGGTGGAGCTGGTACTCGTTTGTTCCCGCTCACGAAGCAGAGAGCTAAACCGGCGGTGATTATTGCCTCTTTTTGAATCTGTTCTTATCGGATTTGTTCATGTCTTGTATTTTATTTTTTACGAATTGCAGGTTCCGATCGGCGGAGCTTACCGGCTGATTGATGTGCCGATGAGCAATTGCATAAACAGTGGAATCAACAAAGTTTACATACTCACGCAGTTCAATTCCGCATCGCTCAACAGGCATCTCGCTCGCGCGTACAACTTCGGTGCCGGAGTCACCTTAGGAGACGGTTTCGTTGAGGTCAGTTCTTAATTCTTCATGTCGATTCATCGTTTTGCATTTTCCGGGAAAACATAAGAACGATGAAAGATTCCGATGTGATTCTTGTTATTATCGCCGCAGGTTCTCGCGGCGACTCAAACTCCGGGAGAGGCCGGGAAGCGGTGGTTCCAGGGGACTGCCGATGCCGTACGACAGTTCCATTGGCTTTTTGAGGTATTTAGAAATTAG

mRNA sequence

ATGGTAGCCTGCGCCGATGGCCGAGTTTCGCTCTCGGCGGCTGCGAACTTGCACGGTGCAATGGCATTGCAGAAAACCAGAAACTCGAAGCTGCAGGTGAGGTTCTGTAACGGAGAATTTATGGGGAAGAAGCTAGTTGCATTGCAACGGAGGAAGCAAGATGTTACTGACATTCCAAATGCCAGACGGAAATTGAGGGAATTGAACATGGAGAAACGTGACCCGAGGACGGTGGTGGCGGTTATATTGGGAGGTGGAGCTGGTACTCGTTTGTTCCCGCTCACGAAGCAGAGAGCTAAACCGGCGGTTCCGATCGGCGGAGCTTACCGGCTGATTGATGTGCCGATGAGCAATTGCATAAACAGTGGAATCAACAAAGTTTACATACTCACGCAGTTCAATTCCGCATCGCTCAACAGGCATCTCGCTCGCGCGTACAACTTCGGTGCCGGAGTCACCTTAGGAGACGGTTTCGTTGAGGTTCTCGCGGCGACTCAAACTCCGGGAGAGGCCGGGAAGCGGTGGTTCCAGGGGACTGCCGATGCCGTACGACAGTTCCATTGGCTTTTTGAGGTATTTAGAAATTAG

Coding sequence (CDS)

ATGGTAGCCTGCGCCGATGGCCGAGTTTCGCTCTCGGCGGCTGCGAACTTGCACGGTGCAATGGCATTGCAGAAAACCAGAAACTCGAAGCTGCAGGTGAGGTTCTGTAACGGAGAATTTATGGGGAAGAAGCTAGTTGCATTGCAACGGAGGAAGCAAGATGTTACTGACATTCCAAATGCCAGACGGAAATTGAGGGAATTGAACATGGAGAAACGTGACCCGAGGACGGTGGTGGCGGTTATATTGGGAGGTGGAGCTGGTACTCGTTTGTTCCCGCTCACGAAGCAGAGAGCTAAACCGGCGGTTCCGATCGGCGGAGCTTACCGGCTGATTGATGTGCCGATGAGCAATTGCATAAACAGTGGAATCAACAAAGTTTACATACTCACGCAGTTCAATTCCGCATCGCTCAACAGGCATCTCGCTCGCGCGTACAACTTCGGTGCCGGAGTCACCTTAGGAGACGGTTTCGTTGAGGTTCTCGCGGCGACTCAAACTCCGGGAGAGGCCGGGAAGCGGTGGTTCCAGGGGACTGCCGATGCCGTACGACAGTTCCATTGGCTTTTTGAGGTATTTAGAAATTAG

Protein sequence

MVACADGRVSLSAAANLHGAMALQKTRNSKLQVRFCNGEFMGKKLVALQRRKQDVTDIPNARRKLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHLARAYNFGAGVTLGDGFVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEVFRN

Homology

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BLAST of Lag0016686 vs. NCBI nr
Match: XP_022138307.1 (glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic-like [Momordica charantia])

HSP 1 Score: 334.7 bits (857), Expect = 5.2e-88
Identity = 175/210 (83.33%), Postives = 184/210 (87.62%), Query Frame = 0


Query: 1   MVACADGRVSLSAAANLHGAMALQKTRNSKLQVRFCNGEFMGKKLVALQRRKQDVTD-IP 60
           MVACADGRVSLSAAA+LH AMAL K  NSKLQVRFCNGEFMG+KL  LQ+RKQ+ T+ IP
Sbjct: 1   MVACADGRVSLSAAAHLHAAMALPKITNSKLQVRFCNGEFMGRKL-TLQQRKQNFTNIIP 60

Query: 61  NARR--------------KLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPI 120
           N RR              KLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPI
Sbjct: 61  NVRRKVRMSLIANIAAESKLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPI 120

Query: 121 GGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHLARAYNFGAGVTLGDGFVEVLAAT 180
           GGAYRLIDVPMSNCINSGINKVYILTQFNS SLNRHLARAYNFG+GVTLGDG++EVLAAT
Sbjct: 121 GGAYRLIDVPMSNCINSGINKVYILTQFNSTSLNRHLARAYNFGSGVTLGDGYIEVLAAT 180

Query: 181 QTPGEAGKRWFQGTADAVRQFHWLFEVFRN 196
           QTPGEAGKRWFQGTADAVRQFHWLFE  R+
Sbjct: 181 QTPGEAGKRWFQGTADAVRQFHWLFEDARS 209

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BLAST of Lag0016686 vs. NCBI nr
Match: KAG6575005.1 (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 323.9 bits (829), Expect = 9.3e-85
Identity = 169/211 (80.09%), Postives = 178/211 (84.36%), Query Frame = 0


Query: 1   MVACADGRVSLSAAANLHGAMALQKTRNSKLQVRFCNGEFMGKKLVALQRRKQDVTDIPN 60
           MVA  DGRVS S AA+LHGAMALQK R+S LQVRFCNGE MGKKL  LQ+RK  V  IPN
Sbjct: 1   MVAGVDGRVSFSTAAHLHGAMALQKIRSSILQVRFCNGELMGKKL-TLQQRKHAVNYIPN 60

Query: 61  ARR----------------KLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVP 120
           ARR                KL+ELNMEK DPRTVVA++LGGGAGTRLFPLTKQRAKPAVP
Sbjct: 61  ARRKVRVSSLLANIAESESKLKELNMEKPDPRTVVAIVLGGGAGTRLFPLTKQRAKPAVP 120

Query: 121 IGGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHLARAYNFGAGVTLGDGFVEVLAA 180
           IGGAYRLIDVPMSNCINSGINKVYILTQFNS SLNRHLARAYNFG GVTLGDG+VEVLAA
Sbjct: 121 IGGAYRLIDVPMSNCINSGINKVYILTQFNSTSLNRHLARAYNFGGGVTLGDGYVEVLAA 180

Query: 181 TQTPGEAGKRWFQGTADAVRQFHWLFEVFRN 196
           TQTPG+AGK+WFQGTADAVRQFHWLFEVF N
Sbjct: 181 TQTPGKAGKQWFQGTADAVRQFHWLFEVFIN 210

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BLAST of Lag0016686 vs. NCBI nr
Match: XP_023006436.1 (glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic-like [Cucurbita maxima])

HSP 1 Score: 320.9 bits (821), Expect = 7.8e-84
Identity = 168/211 (79.62%), Postives = 178/211 (84.36%), Query Frame = 0


Query: 1   MVACADGRVSLSAAANLHGAMALQKTRNSKLQVRFCNGEFMGKKLVALQRRKQDVTDIPN 60
           MVA  DGRVS SAAA+LHGAMALQK R+S LQVRFCNGE MGKKL  LQ+RK  V  IPN
Sbjct: 1   MVAGVDGRVSFSAAAHLHGAMALQKIRSSILQVRFCNGELMGKKL-TLQQRKHAVNYIPN 60

Query: 61  ARR----------------KLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVP 120
           ARR                KL+ELNMEK DPRTVVA++LGGGAGTRLFPLTKQRAKPAVP
Sbjct: 61  ARRKVRVSSLLANIAESESKLKELNMEKPDPRTVVAIVLGGGAGTRLFPLTKQRAKPAVP 120

Query: 121 IGGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHLARAYNFGAGVTLGDGFVEVLAA 180
           IGGAYRLIDVPMSNCINSGINKVYILTQFNS SLNRHLARAYNFG GVTLGDG+VEVLAA
Sbjct: 121 IGGAYRLIDVPMSNCINSGINKVYILTQFNSTSLNRHLARAYNFGGGVTLGDGYVEVLAA 180

Query: 181 TQTPGEAGKRWFQGTADAVRQFHWLFEVFRN 196
           TQTPG+AGK+WFQGTADAVRQFHWLFE  R+
Sbjct: 181 TQTPGKAGKQWFQGTADAVRQFHWLFEDARS 210

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BLAST of Lag0016686 vs. NCBI nr
Match: XP_023547369.1 (glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 319.3 bits (817), Expect = 2.3e-83
Identity = 167/211 (79.15%), Postives = 177/211 (83.89%), Query Frame = 0


Query: 1   MVACADGRVSLSAAANLHGAMALQKTRNSKLQVRFCNGEFMGKKLVALQRRKQDVTDIPN 60
           MVA  DGRVS S AA+LHGAMALQK R+S LQVRFCNGE MGKKL  LQ+RK  V  IPN
Sbjct: 1   MVAGVDGRVSFSTAAHLHGAMALQKIRSSILQVRFCNGELMGKKL-TLQQRKHAVNYIPN 60

Query: 61  ARR----------------KLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVP 120
           ARR                KL+ELNMEK DPRTVVA++LGGGAGTRLFPLTKQRAKPAVP
Sbjct: 61  ARRKVRVSSLLANIAESESKLKELNMEKPDPRTVVAIVLGGGAGTRLFPLTKQRAKPAVP 120

Query: 121 IGGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHLARAYNFGAGVTLGDGFVEVLAA 180
           IGGAYRLIDVPMSNCINSGINKVYILTQFNS SLNRHLARAYNFG GVTLGDG+VEVLAA
Sbjct: 121 IGGAYRLIDVPMSNCINSGINKVYILTQFNSTSLNRHLARAYNFGGGVTLGDGYVEVLAA 180

Query: 181 TQTPGEAGKRWFQGTADAVRQFHWLFEVFRN 196
           TQTPG+AGK+WFQGTADAVRQFHWLFE  R+
Sbjct: 181 TQTPGKAGKQWFQGTADAVRQFHWLFEDARS 210

[Close]

BLAST of Lag0016686 vs. NCBI nr
Match: XP_022959380.1 (glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic-like [Cucurbita moschata] >KAG7013576.1 Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 319.3 bits (817), Expect = 2.3e-83
Identity = 167/211 (79.15%), Postives = 177/211 (83.89%), Query Frame = 0


Query: 1   MVACADGRVSLSAAANLHGAMALQKTRNSKLQVRFCNGEFMGKKLVALQRRKQDVTDIPN 60
           MVA  DGRVS S AA+LHGAMALQK R+S LQVRFCNGE MGKKL  LQ+RK  V  IPN
Sbjct: 1   MVAGVDGRVSFSTAAHLHGAMALQKIRSSILQVRFCNGELMGKKL-TLQQRKHAVNYIPN 60

Query: 61  ARR----------------KLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVP 120
           ARR                KL+ELNMEK DPRTVVA++LGGGAGTRLFPLTKQRAKPAVP
Sbjct: 61  ARRKVRVSSLLANIAESESKLKELNMEKPDPRTVVAIVLGGGAGTRLFPLTKQRAKPAVP 120

Query: 121 IGGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHLARAYNFGAGVTLGDGFVEVLAA 180
           IGGAYRLIDVPMSNCINSGINKVYILTQFNS SLNRHLARAYNFG GVTLGDG+VEVLAA
Sbjct: 121 IGGAYRLIDVPMSNCINSGINKVYILTQFNSTSLNRHLARAYNFGGGVTLGDGYVEVLAA 180

Query: 181 TQTPGEAGKRWFQGTADAVRQFHWLFEVFRN 196
           TQTPG+AGK+WFQGTADAVRQFHWLFE  R+
Sbjct: 181 TQTPGKAGKQWFQGTADAVRQFHWLFEDARS 210

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BLAST of Lag0016686 vs. ExPASy Swiss-Prot
Match: P55229 (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ADG2 PE=1 SV=3)

HSP 1 Score: 248.8 bits (634), Expect = 5.0e-65
Identity = 139/209 (66.51%), Postives = 157/209 (75.12%), Query Frame = 0


Query: 1   MVACADGRVSLSAAANLHGAMALQKTRNSKLQVRFCNGEFMGKKLVALQR---RKQDVTD 60
           MV  AD R+SLSA + +  + +   TR+ KL   FCNGE MGKKL   Q    R +  T+
Sbjct: 1   MVVSADCRISLSAPSCIRSS-STGLTRHIKLG-SFCNGELMGKKLNLSQLPNIRLRSSTN 60

Query: 61  IPNAR-----------RKLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPIG 120
               R            K++EL  EKRDPRTV ++ILGGGAGTRLFPLTK+RAKPAVPIG
Sbjct: 61  FSQKRILMSLNSVAGESKVQELETEKRDPRTVASIILGGGAGTRLFPLTKRRAKPAVPIG 120

Query: 121 GAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHLARAYNFGAGVTLGDGFVEVLAATQ 180
           GAYRLIDVPMSNCINSGINKVYILTQ+NSASLNRHLARAYN   G+  GDG+VEVLAATQ
Sbjct: 121 GAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYN-SNGLGFGDGYVEVLAATQ 180

Query: 181 TPGEAGKRWFQGTADAVRQFHWLFEVFRN 196
           TPGE+GKRWFQGTADAVRQFHWLFE  R+
Sbjct: 181 TPGESGKRWFQGTADAVRQFHWLFEDARS 206

[Close]

BLAST of Lag0016686 vs. ExPASy Swiss-Prot
Match: P55243 (Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic OS=Solanum tuberosum OX=4113 GN=AGPS3 PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.5e-58
Identity = 114/141 (80.85%), Postives = 124/141 (87.94%), Query Frame = 0


Query: 56  TDIPNARRKLRELNMEKR-DPRTVVAVILGGGAGTRLFPLTKQRAKPAVPIGGAYRLIDV 115
           TDI     KL++L  +K+ D RTVVA+ILGGGAGTRLFPLTK+RAKPAVP+GGAYRLIDV
Sbjct: 27  TDIA-GEAKLKDLERQKKGDARTVVAIILGGGAGTRLFPLTKRRAKPAVPMGGAYRLIDV 86

Query: 116 PMSNCINSGINKVYILTQFNSASLNRHLARAYNFGAGVTLGDGFVEVLAATQTPGEAGKR 175
           PMSNCINSGINKVYILTQFNSASLNRH+ARAYNFG GVT   G+VEVLAATQTPGE GKR
Sbjct: 87  PMSNCINSGINKVYILTQFNSASLNRHIARAYNFGNGVTFESGYVEVLAATQTPGELGKR 146

Query: 176 WFQGTADAVRQFHWLFEVFRN 196
           WFQGTA AVRQFHWLFE  R+
Sbjct: 147 WFQGTAHAVRQFHWLFEDARS 166

[Close]

BLAST of Lag0016686 vs. ExPASy Swiss-Prot
Match: Q6AVT2 (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica OX=39947 GN=AGPL1 PE=1 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.0e-57
Identity = 108/122 (88.52%), Postives = 113/122 (92.62%), Query Frame = 0


Query: 70  MEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYI 129
           +E RD +TVVAVILGGGAGTRLFPLTK+RAKPAVPIGGAYRLIDVPMSNCINSGINKVYI
Sbjct: 70  LEARDSKTVVAVILGGGAGTRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINKVYI 129

Query: 130 LTQFNSASLNRHLARAYNFGAGVTLGDGFVEVLAATQTPGEAGKRWFQGTADAVRQFHWL 189
           LTQFNSASLNRHL+RAYNF  GV  GDGFVEVLAATQTPG  GKRWFQGTADAVRQF WL
Sbjct: 130 LTQFNSASLNRHLSRAYNFSNGVAFGDGFVEVLAATQTPGSEGKRWFQGTADAVRQFDWL 189

Query: 190 FE 192
           F+
Sbjct: 190 FD 191

[Close]

BLAST of Lag0016686 vs. ExPASy Swiss-Prot
Match: P55233 (Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic OS=Beta vulgaris OX=161934 GN=AGPS1 PE=2 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 6.7e-54
Identity = 98/120 (81.67%), Postives = 106/120 (88.33%), Query Frame = 0


Query: 72  KRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILT 131
           K DP+ V A++LGGGAGTRLFPLT +RAKPAVPIGG YRLIDVPMSNCINSGI K++ILT
Sbjct: 83  KADPKNVAAIVLGGGAGTRLFPLTSRRAKPAVPIGGCYRLIDVPMSNCINSGIRKIFILT 142

Query: 132 QFNSASLNRHLARAYNFGAGVTLGDGFVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFE 191
           QFNS SLNRHLAR YNFG GV  GDGFVEV AATQTPGE+GK+WFQGTADAVRQF W FE
Sbjct: 143 QFNSFSLNRHLARTYNFGDGVNFGDGFVEVFAATQTPGESGKKWFQGTADAVRQFFWAFE 202

[Close]

BLAST of Lag0016686 vs. ExPASy Swiss-Prot
Match: P55230 (Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APL2 PE=1 SV=2)

HSP 1 Score: 208.0 bits (528), Expect = 9.7e-53
Identity = 96/124 (77.42%), Postives = 108/124 (87.10%), Query Frame = 0


Query: 68  LNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKV 127
           L  +  DP+ V ++ILGGGAGTRLFPLT +RAKPAVPIGG YRLID+PMSNCINSGI K+
Sbjct: 75  LRTQNADPKNVASIILGGGAGTRLFPLTSKRAKPAVPIGGCYRLIDIPMSNCINSGIRKI 134

Query: 128 YILTQFNSASLNRHLARAYNFGAGVTLGDGFVEVLAATQTPGEAGKRWFQGTADAVRQFH 187
           +ILTQFNS SLNRHL+R YNFG GV  GDGFVEVLAATQT G+AGK+WFQGTADAVRQF 
Sbjct: 135 FILTQFNSFSLNRHLSRTYNFGNGVNFGDGFVEVLAATQTSGDAGKKWFQGTADAVRQFI 194

Query: 188 WLFE 192
           W+FE
Sbjct: 195 WVFE 198

[Close]

BLAST of Lag0016686 vs. ExPASy TrEMBL
Match: A0A6J1CAQ7 (Glucose-1-phosphate adenylyltransferase OS=Momordica charantia OX=3673 GN=LOC111009522 PE=3 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.5e-88
Identity = 175/210 (83.33%), Postives = 184/210 (87.62%), Query Frame = 0


Query: 1   MVACADGRVSLSAAANLHGAMALQKTRNSKLQVRFCNGEFMGKKLVALQRRKQDVTD-IP 60
           MVACADGRVSLSAAA+LH AMAL K  NSKLQVRFCNGEFMG+KL  LQ+RKQ+ T+ IP
Sbjct: 1   MVACADGRVSLSAAAHLHAAMALPKITNSKLQVRFCNGEFMGRKL-TLQQRKQNFTNIIP 60

Query: 61  NARR--------------KLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPI 120
           N RR              KLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPI
Sbjct: 61  NVRRKVRMSLIANIAAESKLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPI 120

Query: 121 GGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHLARAYNFGAGVTLGDGFVEVLAAT 180
           GGAYRLIDVPMSNCINSGINKVYILTQFNS SLNRHLARAYNFG+GVTLGDG++EVLAAT
Sbjct: 121 GGAYRLIDVPMSNCINSGINKVYILTQFNSTSLNRHLARAYNFGSGVTLGDGYIEVLAAT 180

Query: 181 QTPGEAGKRWFQGTADAVRQFHWLFEVFRN 196
           QTPGEAGKRWFQGTADAVRQFHWLFE  R+
Sbjct: 181 QTPGEAGKRWFQGTADAVRQFHWLFEDARS 209

[Close]

BLAST of Lag0016686 vs. ExPASy TrEMBL
Match: A0A6J1KXS2 (Glucose-1-phosphate adenylyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111499163 PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.8e-84
Identity = 168/211 (79.62%), Postives = 178/211 (84.36%), Query Frame = 0


Query: 1   MVACADGRVSLSAAANLHGAMALQKTRNSKLQVRFCNGEFMGKKLVALQRRKQDVTDIPN 60
           MVA  DGRVS SAAA+LHGAMALQK R+S LQVRFCNGE MGKKL  LQ+RK  V  IPN
Sbjct: 1   MVAGVDGRVSFSAAAHLHGAMALQKIRSSILQVRFCNGELMGKKL-TLQQRKHAVNYIPN 60

Query: 61  ARR----------------KLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVP 120
           ARR                KL+ELNMEK DPRTVVA++LGGGAGTRLFPLTKQRAKPAVP
Sbjct: 61  ARRKVRVSSLLANIAESESKLKELNMEKPDPRTVVAIVLGGGAGTRLFPLTKQRAKPAVP 120

Query: 121 IGGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHLARAYNFGAGVTLGDGFVEVLAA 180
           IGGAYRLIDVPMSNCINSGINKVYILTQFNS SLNRHLARAYNFG GVTLGDG+VEVLAA
Sbjct: 121 IGGAYRLIDVPMSNCINSGINKVYILTQFNSTSLNRHLARAYNFGGGVTLGDGYVEVLAA 180

Query: 181 TQTPGEAGKRWFQGTADAVRQFHWLFEVFRN 196
           TQTPG+AGK+WFQGTADAVRQFHWLFE  R+
Sbjct: 181 TQTPGKAGKQWFQGTADAVRQFHWLFEDARS 210

[Close]

BLAST of Lag0016686 vs. ExPASy TrEMBL
Match: A0A6J1H645 (Glucose-1-phosphate adenylyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111460369 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.1e-83
Identity = 167/211 (79.15%), Postives = 177/211 (83.89%), Query Frame = 0


Query: 1   MVACADGRVSLSAAANLHGAMALQKTRNSKLQVRFCNGEFMGKKLVALQRRKQDVTDIPN 60
           MVA  DGRVS S AA+LHGAMALQK R+S LQVRFCNGE MGKKL  LQ+RK  V  IPN
Sbjct: 1   MVAGVDGRVSFSTAAHLHGAMALQKIRSSILQVRFCNGELMGKKL-TLQQRKHAVNYIPN 60

Query: 61  ARR----------------KLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVP 120
           ARR                KL+ELNMEK DPRTVVA++LGGGAGTRLFPLTKQRAKPAVP
Sbjct: 61  ARRKVRVSSLLANIAESESKLKELNMEKPDPRTVVAIVLGGGAGTRLFPLTKQRAKPAVP 120

Query: 121 IGGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHLARAYNFGAGVTLGDGFVEVLAA 180
           IGGAYRLIDVPMSNCINSGINKVYILTQFNS SLNRHLARAYNFG GVTLGDG+VEVLAA
Sbjct: 121 IGGAYRLIDVPMSNCINSGINKVYILTQFNSTSLNRHLARAYNFGGGVTLGDGYVEVLAA 180

Query: 181 TQTPGEAGKRWFQGTADAVRQFHWLFEVFRN 196
           TQTPG+AGK+WFQGTADAVRQFHWLFE  R+
Sbjct: 181 TQTPGKAGKQWFQGTADAVRQFHWLFEDARS 210

[Close]

BLAST of Lag0016686 vs. ExPASy TrEMBL
Match: A0A0A0KEY8 (Glucose-1-phosphate adenylyltransferase OS=Cucumis sativus OX=3659 GN=Csa_6G153460 PE=3 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.3e-79
Identity = 162/200 (81.00%), Postives = 169/200 (84.50%), Query Frame = 0


Query: 12  SAAANLHGAMALQKTRNSK-LQVRFCNGEFMGKKLVALQRRKQDVTDIPNARR------- 71
           SAAA+LH AMAL K  NS  LQVRFCNGEFMGKKL   Q+RKQ++  IPN +R       
Sbjct: 4   SAAAHLHTAMALHKVTNSNMLQVRFCNGEFMGKKL-TFQQRKQNINYIPNLKRKLCISSL 63

Query: 72  --------KLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPIGGAYRLIDVP 131
                   KLR LNMEKRD RTVVAVILGGGAGTRLFPLTKQRAKPAVPIGGAYRLIDVP
Sbjct: 64  IADIAAESKLRGLNMEKRDSRTVVAVILGGGAGTRLFPLTKQRAKPAVPIGGAYRLIDVP 123

Query: 132 MSNCINSGINKVYILTQFNSASLNRHLARAYNFGAGVTLGDGFVEVLAATQTPGEAGKRW 191
           MSNCINSGINKVYILTQFNSASLNRHLARAYNFG+GVTLGDGFVEVLAATQTPGEAGKRW
Sbjct: 124 MSNCINSGINKVYILTQFNSASLNRHLARAYNFGSGVTLGDGFVEVLAATQTPGEAGKRW 183

Query: 192 FQGTADAVRQFHWLFEVFRN 196
           FQGTADAVRQFHWLFE  R+
Sbjct: 184 FQGTADAVRQFHWLFEDARS 202

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BLAST of Lag0016686 vs. ExPASy TrEMBL
Match: A0A5A7STU9 (Glucose-1-phosphate adenylyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00680 PE=3 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.8e-78
Identity = 160/200 (80.00%), Postives = 170/200 (85.00%), Query Frame = 0


Query: 12  SAAANLHGAMALQKTRNSK-LQVRFCNGEFMGKKLVALQRRKQDVTDIPNARR------- 71
           SAAA+L+ AMALQK  NS  LQVRFCNGEFMGKKL  LQ+ KQ++  +PN +R       
Sbjct: 4   SAAAHLYTAMALQKITNSNMLQVRFCNGEFMGKKL-KLQQTKQNINCVPNLKRKLCVSSL 63

Query: 72  --------KLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPIGGAYRLIDVP 131
                   KLR LNMEKRD RTVVAVILGGGAGTRLFPLTKQRAKPAVPIGGAYRLIDVP
Sbjct: 64  IANIAAESKLRGLNMEKRDSRTVVAVILGGGAGTRLFPLTKQRAKPAVPIGGAYRLIDVP 123

Query: 132 MSNCINSGINKVYILTQFNSASLNRHLARAYNFGAGVTLGDGFVEVLAATQTPGEAGKRW 191
           MSNCINSGINKVYILTQFNSASLNRHLARAYNFG+GVTLGDGFVEVLAATQTPGEAGK+W
Sbjct: 124 MSNCINSGINKVYILTQFNSASLNRHLARAYNFGSGVTLGDGFVEVLAATQTPGEAGKQW 183

Query: 192 FQGTADAVRQFHWLFEVFRN 196
           FQGTADAVRQFHWLFE  R+
Sbjct: 184 FQGTADAVRQFHWLFEDARS 202

The following BLAST results are available for this feature:

BLAST of Lag0016686 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138307.1	5.2e-88	83.33	glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplas...	[more]
KAG6575005.1	9.3e-85	80.09	Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic, partial ...	[more]
XP_023006436.1	7.8e-84	79.62	glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplas...	[more]
XP_023547369.1	2.3e-83	79.15	glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplas...	[more]
XP_022959380.1	2.3e-83	79.15	glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplas...	[more]

BLAST of Lag0016686 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P55229	5.0e-65	66.51	Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic OS=Arabid...	[more]
P55243	1.5e-58	80.85	Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplas...	[more]
Q6AVT2	1.0e-57	88.52	Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplas...	[more]
P55233	6.7e-54	81.67	Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplasti...	[more]
P55230	9.7e-53	77.42	Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic OS=Arabid...	[more]

BLAST of Lag0016686 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CAQ7	2.5e-88	83.33	Glucose-1-phosphate adenylyltransferase OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1KXS2	3.8e-84	79.62	Glucose-1-phosphate adenylyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111499...	[more]
A0A6J1H645	1.1e-83	79.15	Glucose-1-phosphate adenylyltransferase OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A0A0KEY8	1.3e-79	81.00	Glucose-1-phosphate adenylyltransferase OS=Cucumis sativus OX=3659 GN=Csa_6G1534...	[more]
A0A5A7STU9	1.8e-78	80.00	Glucose-1-phosphate adenylyltransferase OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029044	Nucleotide-diphospho-sugar transferases	GENE3D	3.90.550.10	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	coord: 61..193 e-value: 6.8E-37 score: 129.3
IPR029044	Nucleotide-diphospho-sugar transferases	SUPERFAMILY	53448	Nucleotide-diphospho-sugar transferases	coord: 77..190
IPR005835	Nucleotidyl transferase domain	PFAM	PF00483	NTP_transferase	coord: 80..191 e-value: 4.5E-31 score: 108.3
IPR011831	Glucose-1-phosphate adenylyltransferase	PANTHER	PTHR43523	GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED	coord: 2..194
None	No IPR available	PANTHER	PTHR43523:SF19	GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE	coord: 2..194
IPR005836	ADP-glucose pyrophosphorylase, conserved site	PROSITE	PS00808	ADP_GLC_PYROPHOSPH_1	coord: 84..103
IPR005836	ADP-glucose pyrophosphorylase, conserved site	PROSITE	PS00809	ADP_GLC_PYROPHOSPH_2	coord: 175..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0016686.1	Lag0016686.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005978	glycogen biosynthetic process
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0009058	biosynthetic process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008878	glucose-1-phosphate adenylyltransferase activity
molecular_function	GO:0016779	nucleotidyltransferase activity