Lag0016643 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCATGAGATAGAAGTTGTGAAGTGCGAGTGCTGTGGATTAAAAGAAGAATGCACACAAGATTACATCTCTCAAGTCAAGGCCAACTTCGAATCCAAATGGCTCTGCGGTCTCTGTTCTGAAGCGGTTCGCGATGAGATTTTCAGATCCAAGAATTTGAATTTGAATTTGAATAAGAAGAATCCGCCGCCGGCCGGAATTCAAGACGCCGTCACCGCCCACATGCTCTTCTGCCGCAAGTTCAAGTCTAATCCCGCCGTTAGAGTCGCCGACGCCATGAAGCAAATCTTGAGAAGGCGCTCTACCGACTTGTCGTCTTCTTCTTCCAATTCCAATTCCAGATCCGCTTCTTCTTCTTCCCAGGTTGGCGACATGTCGTCTTTCTCTTCTTTTCGATGA ATGGATCATGAGATAGAAGTTGTGAAGTGCGAGTGCTGTGGATTAAAAGAAGAATGCACACAAGATTACATCTCTCAAGTCAAGGCCAACTTCGAATCCAAATGGCTCTGCGGTCTCTGTTCTGAAGCGGTTCGCGATGAGATTTTCAGATCCAAGAATTTGAATTTGAATTTGAATAAGAAGAATCCGCCGCCGGCCGGAATTCAAGACGCCGTCACCGCCCACATGCTCTTCTGCCGCAAGTTCAAGTCTAATCCCGCCGTTAGAGTCGCCGACGCCATGAAGCAAATCTTGAGAAGGCGCTCTACCGACTTGTCGTCTTCTTCTTCCAATTCCAATTCCAGATCCGCTTCTTCTTCTTCCCAGGTTGGCGACATGTCGTCTTTCTCTTCTTTTCGATGA ATGGATCATGAGATAGAAGTTGTGAAGTGCGAGTGCTGTGGATTAAAAGAAGAATGCACACAAGATTACATCTCTCAAGTCAAGGCCAACTTCGAATCCAAATGGCTCTGCGGTCTCTGTTCTGAAGCGGTTCGCGATGAGATTTTCAGATCCAAGAATTTGAATTTGAATTTGAATAAGAAGAATCCGCCGCCGGCCGGAATTCAAGACGCCGTCACCGCCCACATGCTCTTCTGCCGCAAGTTCAAGTCTAATCCCGCCGTTAGAGTCGCCGACGCCATGAAGCAAATCTTGAGAAGGCGCTCTACCGACTTGTCGTCTTCTTCTTCCAATTCCAATTCCAGATCCGCTTCTTCTTCTTCCCAGGTTGGCGACATGTCGTCTTTCTCTTCTTTTCGATGA MDHEIEVVKCECCGLKEECTQDYISQVKANFESKWLCGLCSEAVRDEIFRSKNLNLNLNKKNPPPAGIQDAVTAHMLFCRKFKSNPAVRVADAMKQILRRRSTDLSSSSSNSNSRSASSSSQVGDMSSFSSFR Homology
BLAST of Lag0016643 vs. NCBI nr
Match: KAG7026232.1 (hypothetical protein SDJN02_12731, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 184.1 bits (466), Expect = 7.8e-43 Identity = 101/131 (77.10%), Postives = 110/131 (83.97%), Query Frame = 0
BLAST of Lag0016643 vs. NCBI nr
Match: XP_038875601.1 (pre-mRNA-splicing factor CWC22 homolog [Benincasa hispida]) HSP 1 Score: 183.3 bits (464), Expect = 1.3e-42 Identity = 105/145 (72.41%), Postives = 117/145 (80.69%), Query Frame = 0
BLAST of Lag0016643 vs. NCBI nr
Match: KAG6593885.1 (hypothetical protein SDJN03_13361, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 183.3 bits (464), Expect = 1.3e-42 Identity = 100/131 (76.34%), Postives = 110/131 (83.97%), Query Frame = 0
BLAST of Lag0016643 vs. NCBI nr
Match: XP_023514443.1 (uncharacterized protein LOC111778702 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 179.1 bits (453), Expect = 2.5e-41 Identity = 100/128 (78.12%), Postives = 106/128 (82.81%), Query Frame = 0
BLAST of Lag0016643 vs. NCBI nr
Match: XP_023000187.1 (uncharacterized protein LOC111494477 [Cucurbita maxima]) HSP 1 Score: 178.3 bits (451), Expect = 4.3e-41 Identity = 97/122 (79.51%), Postives = 103/122 (84.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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