Lag0016572 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAGCAATAGCTTGAGGATGAGCCCACAAGAAGAGCTTAGAATTATAAGCAACTCCAAGATGAAGCCACAACCCAAAGCTAAAGCCTCATTCAAACATAACAACACAAGAGGAGATCAAGAACAAGAAGAAAACATTGGATTTCTATGGCTTTCTTCAGGAGCTTACACATGTAGCTTTTGCAAAAGGCAATTTCGATCGGCACAAGCCCTCGGCGGTCACATGAATGTTCATCGACGAGACCGCGCAAAGCTCAGACGAAGATCTCCTCCATTGGATTCAACTCATCATGGTCATGATTTTCATGGATCTTCATCTCAACCCATTAAGTTTCTCAAACTGTATGACTTCTCAAGCTTTAATAATGGTGGTGAAGAAGAATCAGATGGTGGGTGTAAGATTTGGAAGAAGGTTAAGAAGTTTGTGAACAAGGAGACTGGTTTGCTCAGTGGTTCAAATGAGATAGATTTGGAACTTAGATTAGGGTTTTAG ATGGAGAGCAATAGCTTGAGGATGAGCCCACAAGAAGAGCTTAGAATTATAAGCAACTCCAAGATGAAGCCACAACCCAAAGCTAAAGCCTCATTCAAACATAACAACACAAGAGGAGATCAAGAACAAGAAGAAAACATTGGATTTCTATGGCTTTCTTCAGGAGCTTACACATGTAGCTTTTGCAAAAGGCAATTTCGATCGGCACAAGCCCTCGGCGGTCACATGAATGTTCATCGACGAGACCGCGCAAAGCTCAGACGAAGATCTCCTCCATTGGATTCAACTCATCATGGTCATGATTTTCATGGATCTTCATCTCAACCCATTAAGTTTCTCAAACTGTATGACTTCTCAAGCTTTAATAATGGTGGTGAAGAAGAATCAGATGGTGGGTGTAAGATTTGGAAGAAGGTTAAGAAGTTTGTGAACAAGGAGACTGGTTTGCTCAGTGGTTCAAATGAGATAGATTTGGAACTTAGATTAGGGTTTTAG ATGGAGAGCAATAGCTTGAGGATGAGCCCACAAGAAGAGCTTAGAATTATAAGCAACTCCAAGATGAAGCCACAACCCAAAGCTAAAGCCTCATTCAAACATAACAACACAAGAGGAGATCAAGAACAAGAAGAAAACATTGGATTTCTATGGCTTTCTTCAGGAGCTTACACATGTAGCTTTTGCAAAAGGCAATTTCGATCGGCACAAGCCCTCGGCGGTCACATGAATGTTCATCGACGAGACCGCGCAAAGCTCAGACGAAGATCTCCTCCATTGGATTCAACTCATCATGGTCATGATTTTCATGGATCTTCATCTCAACCCATTAAGTTTCTCAAACTGTATGACTTCTCAAGCTTTAATAATGGTGGTGAAGAAGAATCAGATGGTGGGTGTAAGATTTGGAAGAAGGTTAAGAAGTTTGTGAACAAGGAGACTGGTTTGCTCAGTGGTTCAAATGAGATAGATTTGGAACTTAGATTAGGGTTTTAG MESNSLRMSPQEELRIISNSKMKPQPKAKASFKHNNTRGDQEQEENIGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPLDSTHHGHDFHGSSSQPIKFLKLYDFSSFNNGGEEESDGGCKIWKKVKKFVNKETGLLSGSNEIDLELRLGF Homology
BLAST of Lag0016572 vs. NCBI nr
Match: XP_038875029.1 (transcriptional regulator TAC1-like [Benincasa hispida]) HSP 1 Score: 223.8 bits (569), Expect = 1.1e-54 Identity = 122/161 (75.78%), Postives = 135/161 (83.85%), Query Frame = 0
BLAST of Lag0016572 vs. NCBI nr
Match: XP_011650145.1 (zinc finger protein 3 [Cucumis sativus] >KGN61621.1 hypothetical protein Csa_006689 [Cucumis sativus]) HSP 1 Score: 209.5 bits (532), Expect = 2.1e-50 Identity = 123/181 (67.96%), Postives = 138/181 (76.24%), Query Frame = 0
BLAST of Lag0016572 vs. NCBI nr
Match: XP_008465205.1 (PREDICTED: transcriptional regulator SUPERMAN [Cucumis melo] >KAA0057527.1 transcriptional regulator SUPERMAN [Cucumis melo var. makuwa] >TYK08208.1 transcriptional regulator SUPERMAN [Cucumis melo var. makuwa]) HSP 1 Score: 205.3 bits (521), Expect = 4.0e-49 Identity = 116/164 (70.73%), Postives = 128/164 (78.05%), Query Frame = 0
BLAST of Lag0016572 vs. NCBI nr
Match: XP_023514445.1 (zinc finger protein 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 195.7 bits (496), Expect = 3.2e-46 Identity = 114/169 (67.46%), Postives = 122/169 (72.19%), Query Frame = 0
BLAST of Lag0016572 vs. NCBI nr
Match: KAG6593853.1 (Transcriptional regulator SUPERMAN, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026185.1 Transcriptional regulator SUPERMAN, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 195.3 bits (495), Expect = 4.2e-46 Identity = 113/171 (66.08%), Postives = 124/171 (72.51%), Query Frame = 0
BLAST of Lag0016572 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.4e-12 Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 0
BLAST of Lag0016572 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 4.5e-11 Identity = 32/42 (76.19%), Postives = 35/42 (83.33%), Query Frame = 0
BLAST of Lag0016572 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 3.8e-10 Identity = 29/46 (63.04%), Postives = 39/46 (84.78%), Query Frame = 0
BLAST of Lag0016572 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2) HSP 1 Score: 63.9 bits (154), Expect = 1.9e-09 Identity = 30/49 (61.22%), Postives = 39/49 (79.59%), Query Frame = 0
BLAST of Lag0016572 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 4.7e-08 Identity = 26/36 (72.22%), Postives = 31/36 (86.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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