Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCAGCCTGGATACTCTAATGCTCCTAAACTCATATTCGTTGTCCAAGGCTCCGACATTCGAGGCGTTGCCATTCCCGGCTGTCCAGAGACTTACCAAACCGATATGCGAAGATCGCAATCCGCAGAATCTGCGTTCAGAGACCAACACTAGAAGATCCGCGAGTTCAGAGAGGGAGATCTCCTCATTCTCCCGGCCGGAGTTTCTCACTGGATCTATAACCGAGGACAATCTGATCTCATCTTGATCGTATTCGCTGACACTCGCAATGTCGCCAACCAAATCGATCCCTACCTCAGAGTAAGTTAACAAAAACAGAGTATAACGATTTAATCACTGATTTGAAAAAGAAGTCGCTGAGATTCTTTGTTGAATTTGTTTTAGAAATTTCACCTCGCCGGAAGGCCAGAGCAGATCGAAAGAGGTGTAGAGGAATGGGAAAGAAGAGGTCGCAGGGGATCCGCCGAGGAGAAATCAGGCAATGTGTTCAGCGGATTTGCAGACGAGCTTCTGGAGGAAGCTTTCCAGATCGATAGTGGATTGGTGAGGCGGCTGAAGGGAGAAGACGATGAGAGAGACAAGATCGTGTAA
mRNA sequence
ATGCTTCAGCCTGGATACTCTAATGCTCCTAAACTCATATTCGTTGTCCAAGGCTCCGACATTCGAGGCAAGATCCGCGAGTTCAGAGAGGGAGATCTCCTCATTCTCCCGGCCGGAGTTTCTCACTGGATCTATAACCGAGGACAATCTGATCTCATCTTGATCGTATTCGCTGACACTCGCAATGTCGCCAACCAAATCGATCCCTACCTCAGAAAATTTCACCTCGCCGGAAGGCCAGAGCAGATCGAAAGAGGTGTAGAGGAATGGGAAAGAAGAGGTCGCAGGGGATCCGCCGAGGAGAAATCAGGCAATGTGTTCAGCGGATTTGCAGACGAGCTTCTGGAGGAAGCTTTCCAGATCGATAGTGGATTGGTGAGGCGGCTGAAGGGAGAAGACGATGAGAGAGACAAGATCGTGTAA
Coding sequence (CDS)
ATGCTTCAGCCTGGATACTCTAATGCTCCTAAACTCATATTCGTTGTCCAAGGCTCCGACATTCGAGGCAAGATCCGCGAGTTCAGAGAGGGAGATCTCCTCATTCTCCCGGCCGGAGTTTCTCACTGGATCTATAACCGAGGACAATCTGATCTCATCTTGATCGTATTCGCTGACACTCGCAATGTCGCCAACCAAATCGATCCCTACCTCAGAAAATTTCACCTCGCCGGAAGGCCAGAGCAGATCGAAAGAGGTGTAGAGGAATGGGAAAGAAGAGGTCGCAGGGGATCCGCCGAGGAGAAATCAGGCAATGTGTTCAGCGGATTTGCAGACGAGCTTCTGGAGGAAGCTTTCCAGATCGATAGTGGATTGGTGAGGCGGCTGAAGGGAGAAGACGATGAGAGAGACAAGATCGTGTAA
Protein sequence
MLQPGYSNAPKLIFVVQGSDIRGKIREFREGDLLILPAGVSHWIYNRGQSDLILIVFADTRNVANQIDPYLRKFHLAGRPEQIERGVEEWERRGRRGSAEEKSGNVFSGFADELLEEAFQIDSGLVRRLKGEDDERDKIV
Homology
BLAST of Lag0016537 vs. NCBI nr
Match:
P13744.1 (RecName: Full=11S globulin subunit beta; Contains: RecName: Full=11S globulin gamma chain; AltName: Full=11S globulin acidic chain; Contains: RecName: Full=11S globulin delta chain; AltName: Full=11S globulin basic chain; Flags: Precursor [Cucurbita maxima] >pir|FWPU1B| 11S globulin beta subunit precursor - cucurbita cv. Kurokawa Amakuri [Cucurbita hybrid cultivar] >AAA33110.1 11-S globulin beta-subunit precursor [Cucurbita pepo])
HSP 1 Score: 231.9 bits (590), Expect = 3.4e-57
Identity = 117/169 (69.23%), Postives = 130/169 (76.92%), Query Frame = 0
Query: 1 MLQPGYSNAPKLIFVVQGSDIRG-----------------------------KIREFREG 60
+L PG+SNAPKLIFV QG IRG KIR FREG
Sbjct: 96 LLLPGFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQKIRPFREG 155
Query: 61 DLLILPAGVSHWIYNRGQSDLILIVFADTRNVANQIDPYLRKFHLAGRPEQIERGVEEWE 120
DLL++PAGVSHW+YNRGQSDL+LIVFADTRNVANQIDPYLRKF+LAGRPEQ+ERGVEEWE
Sbjct: 156 DLLVVPAGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVEEWE 215
Query: 121 RRGRRGSAEEKSGNVFSGFADELLEEAFQIDSGLVRRLKGEDDERDKIV 141
R R+GS+ EKSGN+FSGFADE LEEAFQID GLVR+LKGEDDERD+IV
Sbjct: 216 RSSRKGSSGEKSGNIFSGFADEFLEEAFQIDGGLVRKLKGEDDERDRIV 264
BLAST of Lag0016537 vs. NCBI nr
Match:
XP_023000493.1 (11S globulin subunit beta [Cucurbita maxima])
HSP 1 Score: 231.9 bits (590), Expect = 3.4e-57
Identity = 117/169 (69.23%), Postives = 130/169 (76.92%), Query Frame = 0
Query: 1 MLQPGYSNAPKLIFVVQGSDIRG-----------------------------KIREFREG 60
+L PG+SNAPKLIFV QG IRG KIR FREG
Sbjct: 96 LLLPGFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQKIRPFREG 155
Query: 61 DLLILPAGVSHWIYNRGQSDLILIVFADTRNVANQIDPYLRKFHLAGRPEQIERGVEEWE 120
DLL++PAGVSHW+YNRGQSDL+LIVFADTRNVANQIDPYLRKF+LAGRPEQ+ERGVEEWE
Sbjct: 156 DLLVVPAGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVEEWE 215
Query: 121 RRGRRGSAEEKSGNVFSGFADELLEEAFQIDSGLVRRLKGEDDERDKIV 141
R R+GS+ EKSGN+FSGFADE LEEAFQID GLVR+LKGEDDERD+IV
Sbjct: 216 RSSRKGSSGEKSGNIFSGFADEFLEEAFQIDGGLVRKLKGEDDERDRIV 264
BLAST of Lag0016537 vs. NCBI nr
Match:
2E9Q_A (Recombinant pro-11S globulin of pumpkin [Cucurbita maxima] >2EVX_A Crystal structure of pumpkin seed globulin [Cucurbita maxima])
HSP 1 Score: 231.9 bits (590), Expect = 3.4e-57
Identity = 117/169 (69.23%), Postives = 130/169 (76.92%), Query Frame = 0
Query: 1 MLQPGYSNAPKLIFVVQGSDIRG-----------------------------KIREFREG 60
+L PG+SNAPKLIFV QG IRG KIR FREG
Sbjct: 75 LLLPGFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQKIRPFREG 134
Query: 61 DLLILPAGVSHWIYNRGQSDLILIVFADTRNVANQIDPYLRKFHLAGRPEQIERGVEEWE 120
DLL++PAGVSHW+YNRGQSDL+LIVFADTRNVANQIDPYLRKF+LAGRPEQ+ERGVEEWE
Sbjct: 135 DLLVVPAGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVEEWE 194
Query: 121 RRGRRGSAEEKSGNVFSGFADELLEEAFQIDSGLVRRLKGEDDERDKIV 141
R R+GS+ EKSGN+FSGFADE LEEAFQID GLVR+LKGEDDERD+IV
Sbjct: 195 RSSRKGSSGEKSGNIFSGFADEFLEEAFQIDGGLVRKLKGEDDERDRIV 243
BLAST of Lag0016537 vs. NCBI nr
Match:
XP_022964523.1 (11S globulin subunit beta [Cucurbita moschata])
HSP 1 Score: 230.7 bits (587), Expect = 7.7e-57
Identity = 116/169 (68.64%), Postives = 130/169 (76.92%), Query Frame = 0
Query: 1 MLQPGYSNAPKLIFVVQGSDIRG-----------------------------KIREFREG 60
+L PG+SNAPKL+FV QG IRG KIR FREG
Sbjct: 96 LLLPGFSNAPKLVFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFRDQHQKIRPFREG 155
Query: 61 DLLILPAGVSHWIYNRGQSDLILIVFADTRNVANQIDPYLRKFHLAGRPEQIERGVEEWE 120
DLL++PAGVSHW+YNRGQSDL+LIVFADTRNVANQIDPYLRKF+LAGRPEQ+ERGVEEWE
Sbjct: 156 DLLVVPAGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVEEWE 215
Query: 121 RRGRRGSAEEKSGNVFSGFADELLEEAFQIDSGLVRRLKGEDDERDKIV 141
R R+GS+ EKSGN+FSGFADE LEEAFQID GLVR+LKGEDDERD+IV
Sbjct: 216 RSSRKGSSGEKSGNLFSGFADEFLEEAFQIDGGLVRKLKGEDDERDRIV 264
BLAST of Lag0016537 vs. NCBI nr
Match:
XP_023515280.1 (11S globulin subunit beta [Cucurbita pepo subsp. pepo] >KAG7026167.1 hypothetical protein SDJN02_12666, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 230.7 bits (587), Expect = 7.7e-57
Identity = 116/169 (68.64%), Postives = 130/169 (76.92%), Query Frame = 0
Query: 1 MLQPGYSNAPKLIFVVQGSDIRG-----------------------------KIREFREG 60
+L PG+SNAPKL+FV QG IRG KIR FREG
Sbjct: 96 LLLPGFSNAPKLVFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFRDQHQKIRPFREG 155
Query: 61 DLLILPAGVSHWIYNRGQSDLILIVFADTRNVANQIDPYLRKFHLAGRPEQIERGVEEWE 120
DLL++PAGVSHW+YNRGQSDL+LIVFADTRNVANQIDPYLRKF+LAGRPEQ+ERGVEEWE
Sbjct: 156 DLLVVPAGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVEEWE 215
Query: 121 RRGRRGSAEEKSGNVFSGFADELLEEAFQIDSGLVRRLKGEDDERDKIV 141
R R+GS+ EKSGN+FSGFADE LEEAFQID GLVR+LKGEDDERD+IV
Sbjct: 216 RSSRKGSSGEKSGNLFSGFADEFLEEAFQIDGGLVRKLKGEDDERDRIV 264
BLAST of Lag0016537 vs. ExPASy Swiss-Prot
Match:
P13744 (11S globulin subunit beta OS=Cucurbita maxima OX=3661 PE=1 SV=1)
HSP 1 Score: 231.9 bits (590), Expect = 4.5e-60
Identity = 117/169 (69.23%), Postives = 130/169 (76.92%), Query Frame = 0
Query: 1 MLQPGYSNAPKLIFVVQGSDIRG-----------------------------KIREFREG 60
+L PG+SNAPKLIFV QG IRG KIR FREG
Sbjct: 96 LLLPGFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQKIRPFREG 155
Query: 61 DLLILPAGVSHWIYNRGQSDLILIVFADTRNVANQIDPYLRKFHLAGRPEQIERGVEEWE 120
DLL++PAGVSHW+YNRGQSDL+LIVFADTRNVANQIDPYLRKF+LAGRPEQ+ERGVEEWE
Sbjct: 156 DLLVVPAGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVEEWE 215
Query: 121 RRGRRGSAEEKSGNVFSGFADELLEEAFQIDSGLVRRLKGEDDERDKIV 141
R R+GS+ EKSGN+FSGFADE LEEAFQID GLVR+LKGEDDERD+IV
Sbjct: 216 RSSRKGSSGEKSGNIFSGFADEFLEEAFQIDGGLVRKLKGEDDERDRIV 264
BLAST of Lag0016537 vs. ExPASy Swiss-Prot
Match:
Q8GZP6 (11S globulin seed storage protein Ana o 2.0101 (Fragment) OS=Anacardium occidentale OX=171929 PE=1 SV=1)
HSP 1 Score: 121.7 bits (304), Expect = 6.6e-27
Identity = 65/164 (39.63%), Postives = 89/164 (54.27%), Query Frame = 0
Query: 1 MLQPGYSNAPKLIFVVQGSDIRG------------------------------KIREFRE 60
+L P YSNAP+LI+VVQG + G KIR FR
Sbjct: 73 LLLPQYSNAPQLIYVVQGEGMTGISYPGCPETYQAPQQGRQQGQSGRFQDRHQKIRRFRR 132
Query: 61 GDLLILPAGVSHWIYNRGQSDLILIVFADTRNVANQIDPYLRKFHLAGRPEQIERGVEEW 120
GD++ +PAGV+HW YN G S ++ + D N NQ+D RKFHLAG P+ + + ++
Sbjct: 133 GDIIAIPAGVAHWCYNEGNSPVVTVTLLDVSNSQNQLDRTPRKFHLAGNPKDVFQQQQQH 192
Query: 121 ERRGRRGSAEEKSGNVFSGFADELLEEAFQIDSGLVRRLKGEDD 135
+ RGR N+FSGF ELL EAFQ+D L+++LK ED+
Sbjct: 193 QSRGR---------NLFSGFDTELLAEAFQVDERLIKQLKSEDN 227
BLAST of Lag0016537 vs. ExPASy Swiss-Prot
Match:
B5KVH4 (11S globulin seed storage protein 1 OS=Carya illinoinensis OX=32201 PE=1 SV=1)
HSP 1 Score: 117.9 bits (294), Expect = 9.5e-26
Identity = 70/184 (38.04%), Postives = 91/184 (49.46%), Query Frame = 0
Query: 1 MLQPGYSNAPKLIFVVQGSDIRG-------------------------------KIREFR 60
+L P YSNAP+L+++ +G I G KIR FR
Sbjct: 85 LLLPHYSNAPQLVYIARGRGITGVLFPGCPETFEESQRQSQQGQRREFQQDRHQKIRHFR 144
Query: 61 EGDLLILPAGVSHWIYNRGQSDLILIVFADTRNVANQIDPYLRKFHLAGRP--------- 120
EGD++ PAGV+HW YN G S ++ I DT N ANQ+D R F+LAG P
Sbjct: 145 EGDIIAFPAGVAHWCYNDGSSPVVAIFLLDTHNNANQLDQNPRNFYLAGNPDDEFRPQGQ 204
Query: 121 ---EQIERGVEEWERRGRRGSAEEKSG-NVFSGFADELLEEAFQIDSGLVRRLKGEDDER 141
EQ R + +RRG G + G NVFSGF E L +AF +D+ RRL+ E+D R
Sbjct: 205 QEYEQHRRQQQHQQRRGEHGEQQRDLGNNVFSGFDAEFLADAFNVDTETARRLQSENDHR 264
BLAST of Lag0016537 vs. ExPASy Swiss-Prot
Match:
A0A1L6K371 (11S globulin OS=Juglans nigra OX=16719 PE=1 SV=1)
HSP 1 Score: 113.2 bits (282), Expect = 2.3e-24
Identity = 68/188 (36.17%), Postives = 92/188 (48.94%), Query Frame = 0
Query: 1 MLQPGYSNAPKLIFVVQGSDIRG-----------------------------------KI 60
+L P YSNAP+L+++V+G I G KI
Sbjct: 83 LLLPQYSNAPQLLYIVKGRGITGVLFPGCPETFEESQQGQSRIRPSLRSASFQRDRHQKI 142
Query: 61 REFREGDLLILPAGVSHWIYNRGQSDLILIVFADTRNVANQIDPYLRKFHLAGRP----- 120
R FREGD++ PAGV+HW YN G + ++ + DT N ANQ+D R F+LAG P
Sbjct: 143 RHFREGDVIAFPAGVAHWCYNDGDTPVVAVALMDTTNNANQLDQNPRNFYLAGNPDDEFR 202
Query: 121 -------EQIERGVEEWERRGRRGSAEEKSG-NVFSGFADELLEEAFQIDSGLVRRLKGE 141
EQ R + +R G G + SG NVFSGF + L +AF +D+ RRL+ E
Sbjct: 203 PQGQQEYEQHRRQQQHQQRHGEPGQQQRGSGNNVFSGFDADFLADAFNVDTETARRLQSE 262
BLAST of Lag0016537 vs. ExPASy Swiss-Prot
Match:
P09800 (Legumin B OS=Gossypium hirsutum OX=3635 GN=LEGB PE=2 SV=1)
HSP 1 Score: 113.2 bits (282), Expect = 2.3e-24
Identity = 69/180 (38.33%), Postives = 94/180 (52.22%), Query Frame = 0
Query: 1 MLQPGYSNAPKLIFVVQGSDIRG----------------------------KIREFREGD 60
+L P +++AP L +V QG I G K+R +EGD
Sbjct: 98 LLLPSFTSAPMLFYVEQGEGIHGAVFPGCPETYQSQSQQNIQDRPQRDQHQKLRRLKEGD 157
Query: 61 LLILPAGVSHWIYNRGQSDLILIVFADTRNVANQIDPYLRKFHLAGRPE-QIERGVEEWE 120
++ LPAGV+HWI+N G+S L+L+ D N ANQ+D RKF LAG P+ + RG + +
Sbjct: 158 VVALPAGVAHWIFNNGRSQLVLVALVDVGNDANQLDENFRKFFLAGSPQGGVVRGGQSRD 217
Query: 121 R-----RGRRGSAEEK------SGNVFSGFADELLEEAFQIDSGLVRRLKGEDDERDKIV 141
R R +RG EE+ NV SGF D LL +AF ID+ L R+L+ E D R IV
Sbjct: 218 RNQRQSRTQRGEREEEESQESGGNNVLSGFRDNLLAQAFGIDTRLARKLQNERDNRGAIV 277
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P13744.1 | 3.4e-57 | 69.23 | RecName: Full=11S globulin subunit beta; Contains: RecName: Full=11S globulin ga... | [more] |
XP_023000493.1 | 3.4e-57 | 69.23 | 11S globulin subunit beta [Cucurbita maxima] | [more] |
2E9Q_A | 3.4e-57 | 69.23 | Recombinant pro-11S globulin of pumpkin [Cucurbita maxima] >2EVX_A Crystal struc... | [more] |
XP_022964523.1 | 7.7e-57 | 68.64 | 11S globulin subunit beta [Cucurbita moschata] | [more] |
XP_023515280.1 | 7.7e-57 | 68.64 | 11S globulin subunit beta [Cucurbita pepo subsp. pepo] >KAG7026167.1 hypothetica... | [more] |
Match Name | E-value | Identity | Description | |
P13744 | 4.5e-60 | 69.23 | 11S globulin subunit beta OS=Cucurbita maxima OX=3661 PE=1 SV=1 | [more] |
Q8GZP6 | 6.6e-27 | 39.63 | 11S globulin seed storage protein Ana o 2.0101 (Fragment) OS=Anacardium occident... | [more] |
B5KVH4 | 9.5e-26 | 38.04 | 11S globulin seed storage protein 1 OS=Carya illinoinensis OX=32201 PE=1 SV=1 | [more] |
A0A1L6K371 | 2.3e-24 | 36.17 | 11S globulin OS=Juglans nigra OX=16719 PE=1 SV=1 | [more] |
P09800 | 2.3e-24 | 38.33 | Legumin B OS=Gossypium hirsutum OX=3635 GN=LEGB PE=2 SV=1 | [more] |