Lag0016495 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0016495
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	60S ribosomal protein L23
Location	chr12: 38397567 .. 38399817 (+)
RNA-Seq Expression	Lag0016495
Synteny	Lag0016495

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCATGCTCCTAGGGTTTTTAGGAATTCAGAGGCGTTTCTGGCTGAACCAGGTGGAACTGGGGCGACTAGGGGCAATAGAGACCGAACGGAGGCGGATGAGCTCGACTCATGCAAGCGGGCCGAATGGTGGTCAGCTTTGGCCTCGGGCCGAGGCCGACCATATGGGTCGGCCCAAGTTGACCCTACCCTTTGGTCTGGTCTTCCTCTAGGTTGGTTTCCTGGCCCTACCTATAACACATATAATTCAAACATTAATTTAAACCTATCCAATTATCTCTTAAATATAATTAATATATATAAATTGGGGAGAGGATGATAAATACATTTTCCATTTCTATCTCCAAGCTCGCAGGGAATTTTTTCTCCCCATCCTATCTCCTATTCACCACTCTATTGAGGAGGGAACAGGTACCCACAAGACTCGGTGCAAAGACAAATAGACATCTCAGTCAAACGTCTAGGTTTAAAGTGAAAATTGATATAATGTGACACAATTTTAGGATTTTTTTTATAAAAAATTTATTTATTTATTTTTACGCCAAAATTTTTCTAAAACCCATCATAATTTAGATTTAGCCAAATTTAAAATTAATTATAATTATTCGAATTGGGCCTTTAGGAAAGAGATACAGAAACAAACCCTAGATCCCATTTTTATATAAATCGCCACAAAGCCCTAATTTCCTCTCAGTTTCTCGTTTCAGCCGGCGAAAATGTCGAAGCGAGGTAAGCACAAACCCTTCATCCCTTCCTCTCTGTTATTCGCCGTTTCGCCGTCTATGTTTTAGTTTTCTTCTTCATTCTTCCTGTCTTCTGTTAAAGATCTGTTCTTGTTTCATTTATATCCAAAATATTCGCCGTTACACCTTTTTATTGAGTCTGTATCGAACCCACAATTTGTTACTTGAGATCGATTTGTCGCTTGTTGGTACAGGGCGCGGAGGATCTGCAGGTAACAAGTTTAGGATGTCACTGGGTCTGCCAGTGGCGGCGACGGTGAACTGTGCCGACAACACTGGAGCCAAGAATCTGTACATCATCTCAGTGAAGGGCATCAAGGGCCGTTTGAACAGATTGCCCTCGGCATGTGTTGGAGACATGGTGATGGCCACTGTCAAAAAGGGAAAGCCCGATCTCAGGAAGAAGGTCCTTCCTGCTGTCATTGTTAGGCAGCGCAAGCCATGGCGGCGAAAGGATGGAGTTTTCATGTACTTCGAAGGTATGTATGTTTCTCTCAATAGGGATTTTAAGTAGTTTTTTATATTTTAGAAGGTACTATGATACACCTGTTCGAACTTTGATTTGGAGTTGTATTTGCCTGTTGACGTTTGCTATCAATCTCACGAGAGATGCAATGCGTGTTTTTGGCTTTGAACCCTTGTTTTTCCCGGATGGATTACGTCTAATTGAATCTTATTCGTGTCCAAGGTTGGCTTGTATTTGTTCATATCTGAGAATTCCATGATTAACATTTTCTGTTGAAGCTAGATGGTCTTTGTCAGTTATTTTTTATATCTATAATGGTTCTTTGAGGAACAGATATCAAACATATCCAAGTAAAATTTTGAAGAGCTGTGAAGAGTCTTAGATTCATTGGACTGAATGAACTATCAATGCATTCCTAAATATGCAATTAATAGAAACTAAGTTTAGTAAATAAGTTCAAAGCAACCTGTTTTCTTTTTAGTTTCTCGAAGAGTACCTAAGTTTTCCATTTAACCCCATCTATCTTCCAGGCATAAGTCAGGTATCCTCCTCACTGTAATGGTTGATACAGTTAAGTGTCCATCGTTGCAGATGTGTTGAAGCTTTCATGCTCATATCTGCTCCATGTGGACAGTACATTGTTTTGGTTTAAAATGCTTCCATTCTTGATATCGTTGTTCCTTTTAGTACAAGATCATCTGCTCCAATCTGCAGATTCATCCATATAGAAATTTGGTTTAAAAAAGTACTTCTGTATGCGATTTTAATTTCTTTGCATTTGAGTATGGTTTTCTGATTTTGAAAATTTTGTCATCTCTGCAGATAATGCAGGAGTGATTGTGAACCCAAAAGGAGAAATGAAAGGTATGAGTTTTTTCATCAGAAAAAAGATCCACCTTTTATTCTAATTTAACTTCTCCAGGTTATGAAGTTGGTTTGTTGTTGGTGCTGTTACAGGTTCTGCAATTACAGGTCCTATTGGAAAGGAGTGTGCGGATTTATGGCCTAGGATCGCAAGTGCAGCCAATGCTATCGTGTAG

mRNA sequence

ATGAGTCATGCTCCTAGGGTTTTTAGGAATTCAGAGGCGTTTCTGGCTGAACCAGGTGGAACTGGGGCGACTAGGGGCAATAGAGACCGAACGGAGGCGGATGAGCTCGACTCATGCAAGCGGGCCGAATGGTGGTCAGCTTTGGCCTCGGGCCGAGGCCGACCATATGGGTCGGCCCAAGTTGACCCTACCCTTTGGTCTGGTCTTCCTCTAGGGCGCGGAGGATCTGCAGGTAACAAGTTTAGGATGTCACTGGGTCTGCCAGTGGCGGCGACGGTGAACTGTGCCGACAACACTGGAGCCAAGAATCTGTACATCATCTCAGTGAAGGGCATCAAGGGCCGTTTGAACAGATTGCCCTCGGCATGTGTTGGAGACATGGTGATGGCCACTGTCAAAAAGGGAAAGCCCGATCTCAGGAAGAAGGTCCTTCCTGCTGTCATTGTTAGGCAGCGCAAGCCATGGCGGCGAAAGGATGGAGTTTTCATGTACTTCGAAGATAATGCAGGAGTGATTGTGAACCCAAAAGGAGAAATGAAAGGTTCTGCAATTACAGGTCCTATTGGAAAGGAGTGTGCGGATTTATGGCCTAGGATCGCAAGTGCAGCCAATGCTATCGTGTAG

Coding sequence (CDS)

ATGAGTCATGCTCCTAGGGTTTTTAGGAATTCAGAGGCGTTTCTGGCTGAACCAGGTGGAACTGGGGCGACTAGGGGCAATAGAGACCGAACGGAGGCGGATGAGCTCGACTCATGCAAGCGGGCCGAATGGTGGTCAGCTTTGGCCTCGGGCCGAGGCCGACCATATGGGTCGGCCCAAGTTGACCCTACCCTTTGGTCTGGTCTTCCTCTAGGGCGCGGAGGATCTGCAGGTAACAAGTTTAGGATGTCACTGGGTCTGCCAGTGGCGGCGACGGTGAACTGTGCCGACAACACTGGAGCCAAGAATCTGTACATCATCTCAGTGAAGGGCATCAAGGGCCGTTTGAACAGATTGCCCTCGGCATGTGTTGGAGACATGGTGATGGCCACTGTCAAAAAGGGAAAGCCCGATCTCAGGAAGAAGGTCCTTCCTGCTGTCATTGTTAGGCAGCGCAAGCCATGGCGGCGAAAGGATGGAGTTTTCATGTACTTCGAAGATAATGCAGGAGTGATTGTGAACCCAAAAGGAGAAATGAAAGGTTCTGCAATTACAGGTCCTATTGGAAAGGAGTGTGCGGATTTATGGCCTAGGATCGCAAGTGCAGCCAATGCTATCGTGTAG

Protein sequence

MSHAPRVFRNSEAFLAEPGGTGATRGNRDRTEADELDSCKRAEWWSALASGRGRPYGSAQVDPTLWSGLPLGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV

Homology

[Close]

BLAST of Lag0016495 vs. NCBI nr
Match: KAB5537695.1 (hypothetical protein DKX38_015228 [Salix brachista])

HSP 1 Score: 279.3 bits (713), Expect = 2.8e-71
Identity = 137/141 (97.16%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 67  SGLPLGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGD 126
           S +PL RGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGD
Sbjct: 859 SSIPLRRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGD 918

Query: 127 MVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITG 186
           MVMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITG
Sbjct: 919 MVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITG 978

Query: 187 PIGKECADLWPRIASAANAIV 208
           PIGKECADLWPRIASAANAIV
Sbjct: 979 PIGKECADLWPRIASAANAIV 999

[Close]

BLAST of Lag0016495 vs. NCBI nr
Match: KAF4351629.1 (hypothetical protein F8388_003282 [Cannabis sativa])

HSP 1 Score: 278.9 bits (712), Expect = 3.6e-71
Identity = 140/156 (89.74%), Postives = 143/156 (91.67%), Query Frame = 0


Query: 52  RGRPYGSAQVDPTLWSGLPLGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKG 111
           +G  +   Q  PT+      GRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKG
Sbjct: 682 KGITFSRLQQQPTM---SKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKG 741

Query: 112 IKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGV 171
           IKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGV
Sbjct: 742 IKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGV 801

Query: 172 IVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 208
           IVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV
Sbjct: 802 IVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 834

[Close]

BLAST of Lag0016495 vs. NCBI nr
Match: KAF4364815.1 (hypothetical protein G4B88_025534 [Cannabis sativa])

HSP 1 Score: 278.5 bits (711), Expect = 4.7e-71
Identity = 140/153 (91.50%), Postives = 141/153 (92.16%), Query Frame = 0


Query: 55  PYGSAQVDPTLWSGLPLGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKG 114
           P    Q  PT+      GRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKG
Sbjct: 637 PQNRLQQQPTM---SKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKG 696

Query: 115 RLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVN 174
           RLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVN
Sbjct: 697 RLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVN 756

Query: 175 PKGEMKGSAITGPIGKECADLWPRIASAANAIV 208
           PKGEMKGSAITGPIGKECADLWPRIASAANAIV
Sbjct: 757 PKGEMKGSAITGPIGKECADLWPRIASAANAIV 786

[Close]

BLAST of Lag0016495 vs. NCBI nr
Match: KAF4371318.1 (hypothetical protein G4B88_003788 [Cannabis sativa])

HSP 1 Score: 278.5 bits (711), Expect = 4.7e-71
Identity = 140/153 (91.50%), Postives = 141/153 (92.16%), Query Frame = 0


Query: 55  PYGSAQVDPTLWSGLPLGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKG 114
           P    Q  PT+      GRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKG
Sbjct: 637 PQNRLQQQPTM---SKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKG 696

Query: 115 RLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVN 174
           RLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVN
Sbjct: 697 RLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVN 756

Query: 175 PKGEMKGSAITGPIGKECADLWPRIASAANAIV 208
           PKGEMKGSAITGPIGKECADLWPRIASAANAIV
Sbjct: 757 PKGEMKGSAITGPIGKECADLWPRIASAANAIV 786

[Close]

BLAST of Lag0016495 vs. NCBI nr
Match: KAD6120055.1 (hypothetical protein E3N88_11326 [Mikania micrantha])

HSP 1 Score: 277.7 bits (709), Expect = 8.1e-71
Identity = 136/138 (98.55%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 70  PLGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVM 129
           P GRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVM
Sbjct: 750 PNGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVM 809

Query: 130 ATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIG 189
           ATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIG
Sbjct: 810 ATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIG 869

Query: 190 KECADLWPRIASAANAIV 208
           KECADLWPRIASAANAIV
Sbjct: 870 KECADLWPRIASAANAIV 887

[Close]

BLAST of Lag0016495 vs. ExPASy Swiss-Prot
Match: P49690 (60S ribosomal protein L23 OS=Arabidopsis thaliana OX=3702 GN=RPL23A PE=2 SV=3)

HSP 1 Score: 274.2 bits (700), Expect = 1.2e-72
Identity = 134/136 (98.53%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 72  GRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMAT 131
           GRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMAT
Sbjct: 5   GRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMAT 64

Query: 132 VKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 191
           VKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE
Sbjct: 65  VKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 124

Query: 192 CADLWPRIASAANAIV 208
           CADLWPRIASAANAIV
Sbjct: 125 CADLWPRIASAANAIV 140

[Close]

BLAST of Lag0016495 vs. ExPASy Swiss-Prot
Match: Q07760 (60S ribosomal protein L23 OS=Nicotiana tabacum OX=4097 GN=RPL23 PE=2 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 5.8e-72
Identity = 132/136 (97.06%), Postives = 135/136 (99.26%), Query Frame = 0


Query: 72  GRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMAT 131
           GRGGSAGNKFRMSLGLPVAAT+NCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMAT
Sbjct: 5   GRGGSAGNKFRMSLGLPVAATINCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMAT 64

Query: 132 VKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 191
           VKKGKPDLRKKV+PAV+VRQRKPWRRKDGVFMYFEDNAGVIVN KGEMKGSAITGPIGKE
Sbjct: 65  VKKGKPDLRKKVMPAVVVRQRKPWRRKDGVFMYFEDNAGVIVNAKGEMKGSAITGPIGKE 124

Query: 192 CADLWPRIASAANAIV 208
           CADLWPRIASAANAIV
Sbjct: 125 CADLWPRIASAANAIV 140

[Close]

BLAST of Lag0016495 vs. ExPASy Swiss-Prot
Match: Q9XEK8 (60S ribosomal protein L23 OS=Syntrichia ruralis OX=38588 GN=RPL23 PE=2 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 6.2e-66
Identity = 123/136 (90.44%), Postives = 129/136 (94.85%), Query Frame = 0


Query: 72  GRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMAT 131
           GRGGS+GNKFRMSLGLPV A VNCADNTGAKNLY+IS  G++GRLNRLP+A VGDMVMAT
Sbjct: 5   GRGGSSGNKFRMSLGLPVGAVVNCADNTGAKNLYVIS-SGVRGRLNRLPAAAVGDMVMAT 64

Query: 132 VKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 191
           VKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEM  SAITGPIGKE
Sbjct: 65  VKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMNPSAITGPIGKE 124

Query: 192 CADLWPRIASAANAIV 208
           CADLWPRIASAANAIV
Sbjct: 125 CADLWPRIASAANAIV 139

[Close]

BLAST of Lag0016495 vs. ExPASy Swiss-Prot
Match: Q6PC14 (60S ribosomal protein L23 OS=Danio rerio OX=7955 GN=rpl23 PE=2 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 3.5e-61
Identity = 115/135 (85.19%), Postives = 125/135 (92.59%), Query Frame = 0


Query: 72  GRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMAT 131
           GRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLPSA VGDMVMAT
Sbjct: 5   GRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPSAGVGDMVMAT 64

Query: 132 VKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 191
           VKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP+ KE
Sbjct: 65  VKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKE 124

Query: 192 CADLWPRIASAANAI 207
           CADLWPRIAS A +I
Sbjct: 125 CADLWPRIASNAGSI 139

[Close]

BLAST of Lag0016495 vs. ExPASy Swiss-Prot
Match: Q3T057 (60S ribosomal protein L23 OS=Bos taurus OX=9913 GN=RPL23 PE=2 SV=2)

HSP 1 Score: 235.0 bits (598), Expect = 7.9e-61
Identity = 114/135 (84.44%), Postives = 125/135 (92.59%), Query Frame = 0


Query: 72  GRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMAT 131
           GRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDMVMAT
Sbjct: 5   GRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMAT 64

Query: 132 VKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 191
           VKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP+ KE
Sbjct: 65  VKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKE 124

Query: 192 CADLWPRIASAANAI 207
           CADLWPRIAS A +I
Sbjct: 125 CADLWPRIASNAGSI 139

[Close]

BLAST of Lag0016495 vs. ExPASy TrEMBL
Match: A0A5N5L4M2 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_015228 PE=3 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.3e-71
Identity = 137/141 (97.16%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 67  SGLPLGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGD 126
           S +PL RGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGD
Sbjct: 859 SSIPLRRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGD 918

Query: 127 MVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITG 186
           MVMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITG
Sbjct: 919 MVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITG 978

Query: 187 PIGKECADLWPRIASAANAIV 208
           PIGKECADLWPRIASAANAIV
Sbjct: 979 PIGKECADLWPRIASAANAIV 999

[Close]

BLAST of Lag0016495 vs. ExPASy TrEMBL
Match: A0A7J6E1Q8 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_003282 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.8e-71
Identity = 140/156 (89.74%), Postives = 143/156 (91.67%), Query Frame = 0


Query: 52  RGRPYGSAQVDPTLWSGLPLGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKG 111
           +G  +   Q  PT+      GRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKG
Sbjct: 682 KGITFSRLQQQPTM---SKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKG 741

Query: 112 IKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGV 171
           IKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGV
Sbjct: 742 IKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGV 801

Query: 172 IVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 208
           IVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV
Sbjct: 802 IVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 834

[Close]

BLAST of Lag0016495 vs. ExPASy TrEMBL
Match: A0A7J6FL04 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_003788 PE=3 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 2.3e-71
Identity = 140/153 (91.50%), Postives = 141/153 (92.16%), Query Frame = 0


Query: 55  PYGSAQVDPTLWSGLPLGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKG 114
           P    Q  PT+      GRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKG
Sbjct: 637 PQNRLQQQPTM---SKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKG 696

Query: 115 RLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVN 174
           RLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVN
Sbjct: 697 RLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVN 756

Query: 175 PKGEMKGSAITGPIGKECADLWPRIASAANAIV 208
           PKGEMKGSAITGPIGKECADLWPRIASAANAIV
Sbjct: 757 PKGEMKGSAITGPIGKECADLWPRIASAANAIV 786

[Close]

BLAST of Lag0016495 vs. ExPASy TrEMBL
Match: A0A7J6F2D6 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_025534 PE=3 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 2.3e-71
Identity = 140/153 (91.50%), Postives = 141/153 (92.16%), Query Frame = 0


Query: 55  PYGSAQVDPTLWSGLPLGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKG 114
           P    Q  PT+      GRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKG
Sbjct: 637 PQNRLQQQPTM---SKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKG 696

Query: 115 RLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVN 174
           RLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVN
Sbjct: 697 RLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVN 756

Query: 175 PKGEMKGSAITGPIGKECADLWPRIASAANAIV 208
           PKGEMKGSAITGPIGKECADLWPRIASAANAIV
Sbjct: 757 PKGEMKGSAITGPIGKECADLWPRIASAANAIV 786

[Close]

BLAST of Lag0016495 vs. ExPASy TrEMBL
Match: A0A5N6PD68 (Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_11326 PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 3.9e-71
Identity = 136/138 (98.55%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 70  PLGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVM 129
           P GRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVM
Sbjct: 750 PNGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVM 809

Query: 130 ATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIG 189
           ATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIG
Sbjct: 810 ATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIG 869

Query: 190 KECADLWPRIASAANAIV 208
           KECADLWPRIASAANAIV
Sbjct: 870 KECADLWPRIASAANAIV 887

[Close]

BLAST of Lag0016495 vs. TAIR 10
Match: AT1G04480.1 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 274.2 bits (700), Expect = 8.3e-74
Identity = 134/136 (98.53%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 72  GRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMAT 131
           GRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMAT
Sbjct: 5   GRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMAT 64

Query: 132 VKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 191
           VKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE
Sbjct: 65  VKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 124

Query: 192 CADLWPRIASAANAIV 208
           CADLWPRIASAANAIV
Sbjct: 125 CADLWPRIASAANAIV 140

[Close]

BLAST of Lag0016495 vs. TAIR 10
Match: AT2G33370.1 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 274.2 bits (700), Expect = 8.3e-74
Identity = 134/136 (98.53%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 72  GRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMAT 131
           GRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMAT
Sbjct: 5   GRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMAT 64

Query: 132 VKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 191
           VKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE
Sbjct: 65  VKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 124

Query: 192 CADLWPRIASAANAIV 208
           CADLWPRIASAANAIV
Sbjct: 125 CADLWPRIASAANAIV 140

[Close]

BLAST of Lag0016495 vs. TAIR 10
Match: AT3G04400.1 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 274.2 bits (700), Expect = 8.3e-74
Identity = 134/136 (98.53%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 72  GRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMAT 131
           GRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMAT
Sbjct: 5   GRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMAT 64

Query: 132 VKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 191
           VKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE
Sbjct: 65  VKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 124

Query: 192 CADLWPRIASAANAIV 208
           CADLWPRIASAANAIV
Sbjct: 125 CADLWPRIASAANAIV 140

[Close]

BLAST of Lag0016495 vs. TAIR 10
Match: AT3G04400.2 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 254.6 bits (649), Expect = 6.8e-68
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 83  MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK 142
           MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK
Sbjct: 1   MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK 60

Query: 143 VLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASA 202
           VLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASA
Sbjct: 61  VLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASA 120

Query: 203 ANAIV 208
           ANAIV
Sbjct: 121 ANAIV 125

[Close]

BLAST of Lag0016495 vs. TAIR 10
Match: ATCG00780.1 (ribosomal protein L14 )

HSP 1 Score: 68.2 bits (165), Expect = 9.1e-12
Identity = 40/119 (33.61%), Postives = 69/119 (57.98%), Query Frame = 0


Query: 93  VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVLPAVIV 152
           +N ADN+GA+ L  I + G   R      A +GD+++A +K+  P+    R +V+ AVIV
Sbjct: 8   LNVADNSGARELMCIRIIGASNR----RYAHIGDVIVAVIKEAIPNTPLERSEVIRAVIV 67

Query: 153 RQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 208
           R  K  +R +G  + ++DNA V+++ +G  KG+ + G I +E   L + +I S A  ++
Sbjct: 68  RTCKELKRNNGTIIRYDDNAAVVIDQEGNPKGTRVFGAIPRELRQLNFTKIVSLAPEVL 122

The following BLAST results are available for this feature:

BLAST of Lag0016495 vs. NCBI nr


Match Name	E-value	Identity	Description
KAB5537695.1	2.8e-71	97.16	hypothetical protein DKX38_015228 [Salix brachista]	[more]
KAF4351629.1	3.6e-71	89.74	hypothetical protein F8388_003282 [Cannabis sativa]	[more]
KAF4364815.1	4.7e-71	91.50	hypothetical protein G4B88_025534 [Cannabis sativa]	[more]
KAF4371318.1	4.7e-71	91.50	hypothetical protein G4B88_003788 [Cannabis sativa]	[more]
KAD6120055.1	8.1e-71	98.55	hypothetical protein E3N88_11326 [Mikania micrantha]	[more]

BLAST of Lag0016495 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49690	1.2e-72	98.53	60S ribosomal protein L23 OS=Arabidopsis thaliana OX=3702 GN=RPL23A PE=2 SV=3	[more]
Q07760	5.8e-72	97.06	60S ribosomal protein L23 OS=Nicotiana tabacum OX=4097 GN=RPL23 PE=2 SV=1	[more]
Q9XEK8	6.2e-66	90.44	60S ribosomal protein L23 OS=Syntrichia ruralis OX=38588 GN=RPL23 PE=2 SV=1	[more]
Q6PC14	3.5e-61	85.19	60S ribosomal protein L23 OS=Danio rerio OX=7955 GN=rpl23 PE=2 SV=1	[more]
Q3T057	7.9e-61	84.44	60S ribosomal protein L23 OS=Bos taurus OX=9913 GN=RPL23 PE=2 SV=2	[more]

BLAST of Lag0016495 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5N5L4M2	1.3e-71	97.16	Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_015228 PE=3 SV=1	[more]
A0A7J6E1Q8	1.8e-71	89.74	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_003282 PE=3 SV=1	[more]
A0A7J6FL04	2.3e-71	91.50	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_003788 PE=3 SV=1	[more]
A0A7J6F2D6	2.3e-71	91.50	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_025534 PE=3 SV=1	[more]
A0A5N6PD68	3.9e-71	98.55	Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_11326 PE=3 SV=1	[more]

BLAST of Lag0016495 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04480.1	8.3e-74	98.53	Ribosomal protein L14p/L23e family protein	[more]
AT2G33370.1	8.3e-74	98.53	Ribosomal protein L14p/L23e family protein	[more]
AT3G04400.1	8.3e-74	98.53	Ribosomal protein L14p/L23e family protein	[more]
AT3G04400.2	6.8e-68	100.00	Ribosomal protein L14p/L23e family protein	[more]
ATCG00780.1	9.1e-12	33.61	ribosomal protein L14	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000218	Ribosomal protein L14P	SMART	SM01374	Ribosomal_L14_2	coord: 86..207 e-value: 3.2E-60 score: 216.1
IPR000218	Ribosomal protein L14P	PFAM	PF00238	Ribosomal_L14	coord: 89..207 e-value: 2.2E-35 score: 121.3
IPR000218	Ribosomal protein L14P	PANTHER	PTHR11761	50S/60S RIBOSOMAL PROTEIN L14/L23	coord: 72..207
IPR000218	Ribosomal protein L14P	HAMAP	MF_01367	Ribosomal_L14	coord: 86..207 score: 19.384665
IPR036853	Ribosomal protein L14 superfamily	GENE3D	2.40.150.20	Ribosomal protein L14	coord: 71..207 e-value: 3.8E-54 score: 184.1
IPR036853	Ribosomal protein L14 superfamily	SUPERFAMILY	50193	Ribosomal protein L14	coord: 78..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	PANTHER	PTHR11761:SF19	60S RIBOSOMAL PROTEIN L23	coord: 72..207
IPR019972	Ribosomal protein L14P, conserved site	PROSITE	PS00049	RIBOSOMAL_L14	coord: 146..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0016495.1	Lag0016495.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0070180	large ribosomal subunit rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome