Lag0016427 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0016427
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	60S ribosomal protein L13a
Location	chr12: 37642102 .. 37643653 (-)
RNA-Seq Expression	Lag0016427
Synteny	Lag0016427

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAATATGCCCAAAATGGAAGGCCCAATGAGTTTTAGCCCTAATTGGAACCCTGATATTAACCCTAGCAACTCCAGTCCTTGCAGAGAGGAAGAAGACGATAGCCGCTCCAGGGTTTTGCACAGAGACGAGAAAATGGTGTCCGGTTCCGGTATCTGCGCCAAGCGCGTTGTCGTCGATGCAAGGCATCACATGTTGGGAAGGCTCTCTTCGATTATCGCCAAAGAGCTTCTCAACGGCCAGAAAGTCGTCGTCGTCAGGTGCGAGGAGATCTGCATCTCCGGCGGGTTGGTCCGCCAGAAGATGAAGTACATGCGCTTCTTGAGGAAGCGGATGAACACCAAGCCCTCCCATGGCCCCATTCACTTCCGTGCCCCCGCTAAGATCCTCTGGCGCACCATTCGTGGGTATTGTCTTTGCTCTCTTCTTCTGCATTTTGTGTATTTTCAATGCCATACCCTTTCCACTGTTCGATTTGGGTTCCTTACGATTGGGGTTTTGCAGCATGATTCCCCATAAGACTAAGCGTGGTGCGGCGGCGCTTGCCCGTTTGAAGGCGTACGAGGGTGTTCCTCCGCCGTATGATAAGATGAAGAGGATGGTTATCCCTGATGCTCTCAAGTAAGCTGTGTTTTGTGGGTTTATGGTTTTGATGTTTCTTTTAGTTCTGATTATAAGATCTTTATATTTACAAATTGGTTTTTTCGCTTTGGAAATTCAGGGTCTTGAGGCTTCAAGCAGGACATAAGTACTGCTTGTTGGGCAGGCTATCCTCGGAGGTTGGATGGAACCATTATGATACCATCAAGGTGAGATTTGAGAATATCATGTGCTTTGAAATTAGTTAACTCTGTCTCTATGAATTTCATTGTGAATATTGTTACTAGATCGTATTGCTGTTTGGAGTGGAAATAGAATTTTGGTGATTGGCTGATTTCAACTGCAGTGGTGTATCTTTGGACTCAATTATGGGTGGATCTTGTGATGTTTTCTTGTTTAAATTAATGTGAATTATGCTTTTTGGGCGCCATACGTTCACTCTTTTTATTGCTTGCCATTGATTTTAGGTTCACTTCTTACTGTTGATCTCCAACTTTCAGTCTCAATTTCTAGTGTTGTTTTGATTATGCAAGTTATAAATTCACTTGTTTAATTGTATGTTGCTTTTATTTTTGCCCCTAAACTGTAATCCTTTCGAACTGGTGAATGGAAGTATATATCACTTGTCCAGTACTTGGTTTATACAGATATCAAAGTTCGACCTTTGGAAGTATGAATAATCCTCATATTTTGGCTCTAATGTTTAAGCAATTTCTCTTCCTGTTTGGATTATCCTGCTACCTAATTTCTTTATTTTTTTTTCCAAGATTCAGTTCTGACGTAGTGATGTTTTATAACAATGCAGGAACTCGAGAGGAAGAGAAAGGAGAGAGCTCAAGCTGCATATGAGAAGAAGAAACAGTTAAATAAGCTGAGGATTAAAGCCGAGAAGGTTGCCGAGGAGAAGCTTGGACCCCAACTTGAAGTTATTGCTCCTATCAAATACTAA

mRNA sequence

ATGAAAAATATGCCCAAAATGGAAGGCCCAATGAGTTTTAGCCCTAATTGGAACCCTGATATTAACCCTAGCAACTCCAGTCCTTGCAGAGAGGAAGAAGACGATAGCCGCTCCAGGGTTTTGCACAGAGACGAGAAAATGGTGTCCGGTTCCGGTATCTGCGCCAAGCGCGTTGTCGTCGATGCAAGGCATCACATGTTGGGAAGGCTCTCTTCGATTATCGCCAAAGAGCTTCTCAACGGCCAGAAAGTCGTCGTCGTCAGGTGCGAGGAGATCTGCATCTCCGGCGGGTTGGTCCGCCAGAAGATGAAGTACATGCGCTTCTTGAGGAAGCGGATGAACACCAAGCCCTCCCATGGCCCCATTCACTTCCGTGCCCCCGCTAAGATCCTCTGGCGCACCATTCGTGGCATGATTCCCCATAAGACTAAGCGTGGTGCGGCGGCGCTTGCCCGTTTGAAGGCGTACGAGGGTGTTCCTCCGCCGTATGATAAGATGAAGAGGATGGTTATCCCTGATGCTCTCAAGGTCTTGAGGCTTCAAGCAGGACATAAGTACTGCTTGTTGGGCAGGCTATCCTCGGAGGTTGGATGGAACCATTATGATACCATCAAGGAACTCGAGAGGAAGAGAAAGGAGAGAGCTCAAGCTGCATATGAGAAGAAGAAACAGTTAAATAAGCTGAGGATTAAAGCCGAGAAGGTTGCCGAGGAGAAGCTTGGACCCCAACTTGAAGTTATTGCTCCTATCAAATACTAA

Coding sequence (CDS)

ATGAAAAATATGCCCAAAATGGAAGGCCCAATGAGTTTTAGCCCTAATTGGAACCCTGATATTAACCCTAGCAACTCCAGTCCTTGCAGAGAGGAAGAAGACGATAGCCGCTCCAGGGTTTTGCACAGAGACGAGAAAATGGTGTCCGGTTCCGGTATCTGCGCCAAGCGCGTTGTCGTCGATGCAAGGCATCACATGTTGGGAAGGCTCTCTTCGATTATCGCCAAAGAGCTTCTCAACGGCCAGAAAGTCGTCGTCGTCAGGTGCGAGGAGATCTGCATCTCCGGCGGGTTGGTCCGCCAGAAGATGAAGTACATGCGCTTCTTGAGGAAGCGGATGAACACCAAGCCCTCCCATGGCCCCATTCACTTCCGTGCCCCCGCTAAGATCCTCTGGCGCACCATTCGTGGCATGATTCCCCATAAGACTAAGCGTGGTGCGGCGGCGCTTGCCCGTTTGAAGGCGTACGAGGGTGTTCCTCCGCCGTATGATAAGATGAAGAGGATGGTTATCCCTGATGCTCTCAAGGTCTTGAGGCTTCAAGCAGGACATAAGTACTGCTTGTTGGGCAGGCTATCCTCGGAGGTTGGATGGAACCATTATGATACCATCAAGGAACTCGAGAGGAAGAGAAAGGAGAGAGCTCAAGCTGCATATGAGAAGAAGAAACAGTTAAATAAGCTGAGGATTAAAGCCGAGAAGGTTGCCGAGGAGAAGCTTGGACCCCAACTTGAAGTTATTGCTCCTATCAAATACTAA

Protein sequence

MKNMPKMEGPMSFSPNWNPDINPSNSSPCREEEDDSRSRVLHRDEKMVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPQLEVIAPIKY

Homology

[Close]

BLAST of Lag0016427 vs. NCBI nr
Match: XP_022964267.1 (60S ribosomal protein L13a-4 [Cucurbita moschata] >XP_023515318.1 60S ribosomal protein L13a-4 [Cucurbita pepo subsp. pepo] >KAG6593785.1 60S ribosomal protein L13a-4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026115.1 60S ribosomal protein L13a-4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 405.6 bits (1041), Expect = 3.1e-109
Identity = 205/206 (99.51%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 47  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 106
           MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 107 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 166
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKI 120

Query: 167 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN 226
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN 180

Query: 227 KLRIKAEKVAEEKLGPQLEVIAPIKY 253
           KLRIKAEKVAEEKLGPQLEVIAPIKY
Sbjct: 181 KLRIKAEKVAEEKLGPQLEVIAPIKY 206

[Close]

BLAST of Lag0016427 vs. NCBI nr
Match: XP_008450411.1 (PREDICTED: 60S ribosomal protein L13a-4 [Cucumis melo] >XP_008457247.1 PREDICTED: 60S ribosomal protein L13a-4 [Cucumis melo] >XP_008458460.1 PREDICTED: 60S ribosomal protein L13a-4 [Cucumis melo] >XP_011649089.1 60S ribosomal protein L13a-4 [Cucumis sativus] >XP_031736175.1 60S ribosomal protein L13a-4 [Cucumis sativus] >KAA0033292.1 60S ribosomal protein L13a-4 [Cucumis melo var. makuwa] >KAA0051231.1 60S ribosomal protein L13a-4 [Cucumis melo var. makuwa] >KAE8653514.1 hypothetical protein Csa_007589 [Cucumis sativus] >KGN61467.1 hypothetical protein Csa_006236 [Cucumis sativus] >TYK14816.1 60S ribosomal protein L13a-4 [Cucumis melo var. makuwa])

HSP 1 Score: 404.8 bits (1039), Expect = 5.3e-109
Identity = 204/206 (99.03%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 47  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 106
           MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 107 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 166
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 167 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN 226
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QAAYE+KKQLN
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLN 180

Query: 227 KLRIKAEKVAEEKLGPQLEVIAPIKY 253
           KLRIKAEKVAEEKLGPQLEVIAPIKY
Sbjct: 181 KLRIKAEKVAEEKLGPQLEVIAPIKY 206

[Close]

BLAST of Lag0016427 vs. NCBI nr
Match: XP_022999881.1 (60S ribosomal protein L13a-4 [Cucurbita maxima])

HSP 1 Score: 404.4 bits (1038), Expect = 7.0e-109
Identity = 204/206 (99.03%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 47  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 106
           MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 107 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 166
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKI 120

Query: 167 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN 226
           K+MVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN
Sbjct: 121 KKMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN 180

Query: 227 KLRIKAEKVAEEKLGPQLEVIAPIKY 253
           KLRIKAEKVAEEKLGPQLEVIAPIKY
Sbjct: 181 KLRIKAEKVAEEKLGPQLEVIAPIKY 206

[Close]

BLAST of Lag0016427 vs. NCBI nr
Match: XP_023521847.1 (60S ribosomal protein L13a-4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 402.9 bits (1034), Expect = 2.0e-108
Identity = 202/206 (98.06%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 47  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 106
           MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 107 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 166
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 167 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN 226
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQA YEKKKQLN
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLN 180

Query: 227 KLRIKAEKVAEEKLGPQLEVIAPIKY 253
           KLR+KAEKVA+EKLGPQL+VIAPIKY
Sbjct: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 206

[Close]

BLAST of Lag0016427 vs. NCBI nr
Match: XP_038906567.1 (60S ribosomal protein L13a-4 [Benincasa hispida])

HSP 1 Score: 402.9 bits (1034), Expect = 2.0e-108
Identity = 203/206 (98.54%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 47  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 106
           MVSGSGICAKRVVVDARHHMLGRL+SIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 107 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 166
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPY+KM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYNKM 120

Query: 167 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN 226
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYE+KKQLN
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYERKKQLN 180

Query: 227 KLRIKAEKVAEEKLGPQLEVIAPIKY 253
           KLRIKAEKVAEEKLGPQLEVIAPIKY
Sbjct: 181 KLRIKAEKVAEEKLGPQLEVIAPIKY 206

[Close]

BLAST of Lag0016427 vs. ExPASy Swiss-Prot
Match: Q9FKC0 (60S ribosomal protein L13a-4 OS=Arabidopsis thaliana OX=3702 GN=RPL13AD PE=2 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 9.2e-104
Identity = 184/206 (89.32%), Postives = 197/206 (95.63%), Query Frame = 0


Query: 47  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 106
           MVSGSGIC+KRVVVDARHHMLGRL+SI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 107 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 166
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK YEGVP PYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120

Query: 167 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN 226
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERA   YE+KKQLN
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERAHVVYERKKQLN 180

Query: 227 KLRIKAEKVAEEKLGPQLEVIAPIKY 253
           KLR+KAEKVAEEKLG QL+++AP+KY
Sbjct: 181 KLRVKAEKVAEEKLGAQLDILAPVKY 206

[Close]

BLAST of Lag0016427 vs. ExPASy Swiss-Prot
Match: Q9SFU1 (60S ribosomal protein L13a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL13AA PE=2 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 1.7e-102
Identity = 181/206 (87.86%), Postives = 197/206 (95.63%), Query Frame = 0


Query: 47  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 106
           MVSGSGICAKRVVVDARHHMLGRL+S++AK+LLNGQ +VVVRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYM 60

Query: 107 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 166
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGA ALARLK +EGVP PYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKI 120

Query: 167 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN 226
           KRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERAQA YE+KKQL+
Sbjct: 121 KRMVVPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELENKRKERAQAVYERKKQLS 180

Query: 227 KLRIKAEKVAEEKLGPQLEVIAPIKY 253
           KLR KAEKVAEEKLG QL+V+AP+KY
Sbjct: 181 KLRAKAEKVAEEKLGSQLDVLAPVKY 206

[Close]

BLAST of Lag0016427 vs. ExPASy Swiss-Prot
Match: Q9LRX8 (60S ribosomal protein L13a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL13AB PE=2 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 2.9e-102
Identity = 185/206 (89.81%), Postives = 196/206 (95.15%), Query Frame = 0


Query: 47  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 106
           MVSGSGIC+KRVVVDARHHM GRL+SIIAKELLNGQ VVVVRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYM 60

Query: 107 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 166
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK +EGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKV 120

Query: 167 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN 226
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+QA YE+KKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEVKRKERSQALYERKKQLT 180

Query: 227 KLRIKAEKVAEEKLGPQLEVIAPIKY 253
           KLR KAEKVAEEKLG QL+V+A IKY
Sbjct: 181 KLRAKAEKVAEEKLGSQLDVLASIKY 206

[Close]

BLAST of Lag0016427 vs. ExPASy Swiss-Prot
Match: Q9SVR0 (60S ribosomal protein L13a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL13AC PE=2 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 6.6e-102
Identity = 181/206 (87.86%), Postives = 196/206 (95.15%), Query Frame = 0


Query: 47  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 106
           MVSGSGICAKRVVVD RHHMLGRL+S  AKELLNGQ+VVVVRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYM 60

Query: 107 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 166
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK +EG+PPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDKI 120

Query: 167 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN 226
           KRMVIPDALKVLRLQ+GHKYCLLGRLSSEVGWNHYDTIKELE KRKER+Q  YE+KKQLN
Sbjct: 121 KRMVIPDALKVLRLQSGHKYCLLGRLSSEVGWNHYDTIKELETKRKERSQVMYERKKQLN 180

Query: 227 KLRIKAEKVAEEKLGPQLEVIAPIKY 253
           KLR KAEKVAEE+LG QL+V+AP+KY
Sbjct: 181 KLRTKAEKVAEERLGSQLDVLAPVKY 206

[Close]

BLAST of Lag0016427 vs. ExPASy Swiss-Prot
Match: O49885 (60S ribosomal protein L13a OS=Lupinus luteus OX=3873 GN=RPL13A PE=2 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 5.4e-96
Identity = 171/206 (83.01%), Postives = 193/206 (93.69%), Query Frame = 0


Query: 47  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 106
           MVSGSGI AKRVVVDARHHMLGRL+SI+AKELLNGQKVV+VR EEICISGGLVRQKMKY+
Sbjct: 1   MVSGSGIAAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRSEEICISGGLVRQKMKYL 60

Query: 107 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 166
           RFLRKRMNTKPSHGPIH  AP+KI WRT+RGMIPHKTKRG  ALARLK YEG+PPP+DK 
Sbjct: 61  RFLRKRMNTKPSHGPIHC-APSKIFWRTVRGMIPHKTKRGEHALARLKVYEGIPPPFDKQ 120

Query: 167 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN 226
           KR+V+PDALKVLRLQ GHKYCLLG+LSSEVGWN+YDTIKELE+KRKER+Q  YE+KKQLN
Sbjct: 121 KRLVVPDALKVLRLQKGHKYCLLGQLSSEVGWNYYDTIKELEKKRKERSQVVYERKKQLN 180

Query: 227 KLRIKAEKVAEEKLGPQLEVIAPIKY 253
           KLR+KAE+VA+EKLG QL+++AP+KY
Sbjct: 181 KLRVKAEQVAQEKLGSQLDILAPVKY 205

[Close]

BLAST of Lag0016427 vs. ExPASy TrEMBL
Match: A0A6J1HHD3 (60S ribosomal protein L13a-4 OS=Cucurbita moschata OX=3662 GN=LOC111464335 PE=3 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.5e-109
Identity = 205/206 (99.51%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 47  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 106
           MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 107 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 166
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKI 120

Query: 167 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN 226
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN 180

Query: 227 KLRIKAEKVAEEKLGPQLEVIAPIKY 253
           KLRIKAEKVAEEKLGPQLEVIAPIKY
Sbjct: 181 KLRIKAEKVAEEKLGPQLEVIAPIKY 206

[Close]

BLAST of Lag0016427 vs. ExPASy TrEMBL
Match: A0A1S3C555 (60S ribosomal protein L13a-4 OS=Cucumis melo OX=3656 GN=LOC103496971 PE=3 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.6e-109
Identity = 204/206 (99.03%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 47  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 106
           MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 107 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 166
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 167 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN 226
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QAAYE+KKQLN
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLN 180

Query: 227 KLRIKAEKVAEEKLGPQLEVIAPIKY 253
           KLRIKAEKVAEEKLGPQLEVIAPIKY
Sbjct: 181 KLRIKAEKVAEEKLGPQLEVIAPIKY 206

[Close]

BLAST of Lag0016427 vs. ExPASy TrEMBL
Match: A0A5A7SQ28 (60S ribosomal protein L13a-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold472G00050 PE=3 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.6e-109
Identity = 204/206 (99.03%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 47  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 106
           MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 107 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 166
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 167 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN 226
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QAAYE+KKQLN
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLN 180

Query: 227 KLRIKAEKVAEEKLGPQLEVIAPIKY 253
           KLRIKAEKVAEEKLGPQLEVIAPIKY
Sbjct: 181 KLRIKAEKVAEEKLGPQLEVIAPIKY 206

[Close]

BLAST of Lag0016427 vs. ExPASy TrEMBL
Match: A0A0A0LL54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G138710 PE=3 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.6e-109
Identity = 204/206 (99.03%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 47  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 106
           MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 107 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 166
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 167 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN 226
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QAAYE+KKQLN
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLN 180

Query: 227 KLRIKAEKVAEEKLGPQLEVIAPIKY 253
           KLRIKAEKVAEEKLGPQLEVIAPIKY
Sbjct: 181 KLRIKAEKVAEEKLGPQLEVIAPIKY 206

[Close]

BLAST of Lag0016427 vs. ExPASy TrEMBL
Match: A0A6J1KEC1 (60S ribosomal protein L13a-4 OS=Cucurbita maxima OX=3661 GN=LOC111494221 PE=3 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 3.4e-109
Identity = 204/206 (99.03%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 47  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 106
           MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 107 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 166
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKI 120

Query: 167 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN 226
           K+MVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN
Sbjct: 121 KKMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN 180

Query: 227 KLRIKAEKVAEEKLGPQLEVIAPIKY 253
           KLRIKAEKVAEEKLGPQLEVIAPIKY
Sbjct: 181 KLRIKAEKVAEEKLGPQLEVIAPIKY 206

[Close]

BLAST of Lag0016427 vs. TAIR 10
Match: AT5G48760.1 (Ribosomal protein L13 family protein )

HSP 1 Score: 377.9 bits (969), Expect = 6.5e-105
Identity = 184/206 (89.32%), Postives = 197/206 (95.63%), Query Frame = 0


Query: 47  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 106
           MVSGSGIC+KRVVVDARHHMLGRL+SI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 107 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 166
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK YEGVP PYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120

Query: 167 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN 226
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERA   YE+KKQLN
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERAHVVYERKKQLN 180

Query: 227 KLRIKAEKVAEEKLGPQLEVIAPIKY 253
           KLR+KAEKVAEEKLG QL+++AP+KY
Sbjct: 181 KLRVKAEKVAEEKLGAQLDILAPVKY 206

[Close]

BLAST of Lag0016427 vs. TAIR 10
Match: AT5G48760.2 (Ribosomal protein L13 family protein )

HSP 1 Score: 377.9 bits (969), Expect = 6.5e-105
Identity = 184/206 (89.32%), Postives = 197/206 (95.63%), Query Frame = 0


Query: 47  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 106
           MVSGSGIC+KRVVVDARHHMLGRL+SI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 107 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 166
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK YEGVP PYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120

Query: 167 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN 226
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERA   YE+KKQLN
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERAHVVYERKKQLN 180

Query: 227 KLRIKAEKVAEEKLGPQLEVIAPIKY 253
           KLR+KAEKVAEEKLG QL+++AP+KY
Sbjct: 181 KLRVKAEKVAEEKLGAQLDILAPVKY 206

[Close]

BLAST of Lag0016427 vs. TAIR 10
Match: AT3G07110.1 (Ribosomal protein L13 family protein )

HSP 1 Score: 373.6 bits (958), Expect = 1.2e-103
Identity = 181/206 (87.86%), Postives = 197/206 (95.63%), Query Frame = 0


Query: 47  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 106
           MVSGSGICAKRVVVDARHHMLGRL+S++AK+LLNGQ +VVVRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYM 60

Query: 107 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 166
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGA ALARLK +EGVP PYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKI 120

Query: 167 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN 226
           KRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERAQA YE+KKQL+
Sbjct: 121 KRMVVPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELENKRKERAQAVYERKKQLS 180

Query: 227 KLRIKAEKVAEEKLGPQLEVIAPIKY 253
           KLR KAEKVAEEKLG QL+V+AP+KY
Sbjct: 181 KLRAKAEKVAEEKLGSQLDVLAPVKY 206

[Close]

BLAST of Lag0016427 vs. TAIR 10
Match: AT3G24830.1 (Ribosomal protein L13 family protein )

HSP 1 Score: 372.9 bits (956), Expect = 2.1e-103
Identity = 185/206 (89.81%), Postives = 196/206 (95.15%), Query Frame = 0


Query: 47  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 106
           MVSGSGIC+KRVVVDARHHM GRL+SIIAKELLNGQ VVVVRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYM 60

Query: 107 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 166
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK +EGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKV 120

Query: 167 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN 226
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+QA YE+KKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEVKRKERSQALYERKKQLT 180

Query: 227 KLRIKAEKVAEEKLGPQLEVIAPIKY 253
           KLR KAEKVAEEKLG QL+V+A IKY
Sbjct: 181 KLRAKAEKVAEEKLGSQLDVLASIKY 206

[Close]

BLAST of Lag0016427 vs. TAIR 10
Match: AT4G13170.1 (Ribosomal protein L13 family protein )

HSP 1 Score: 371.7 bits (953), Expect = 4.7e-103
Identity = 181/206 (87.86%), Postives = 196/206 (95.15%), Query Frame = 0


Query: 47  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 106
           MVSGSGICAKRVVVD RHHMLGRL+S  AKELLNGQ+VVVVRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYM 60

Query: 107 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 166
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK +EG+PPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDKI 120

Query: 167 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN 226
           KRMVIPDALKVLRLQ+GHKYCLLGRLSSEVGWNHYDTIKELE KRKER+Q  YE+KKQLN
Sbjct: 121 KRMVIPDALKVLRLQSGHKYCLLGRLSSEVGWNHYDTIKELETKRKERSQVMYERKKQLN 180

Query: 227 KLRIKAEKVAEEKLGPQLEVIAPIKY 253
           KLR KAEKVAEE+LG QL+V+AP+KY
Sbjct: 181 KLRTKAEKVAEERLGSQLDVLAPVKY 206

The following BLAST results are available for this feature:

BLAST of Lag0016427 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964267.1	3.1e-109	99.51	60S ribosomal protein L13a-4 [Cucurbita moschata] >XP_023515318.1 60S ribosomal ...	[more]
XP_008450411.1	5.3e-109	99.03	PREDICTED: 60S ribosomal protein L13a-4 [Cucumis melo] >XP_008457247.1 PREDICTED...	[more]
XP_022999881.1	7.0e-109	99.03	60S ribosomal protein L13a-4 [Cucurbita maxima]	[more]
XP_023521847.1	2.0e-108	98.06	60S ribosomal protein L13a-4-like [Cucurbita pepo subsp. pepo]	[more]
XP_038906567.1	2.0e-108	98.54	60S ribosomal protein L13a-4 [Benincasa hispida]	[more]

BLAST of Lag0016427 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKC0	9.2e-104	89.32	60S ribosomal protein L13a-4 OS=Arabidopsis thaliana OX=3702 GN=RPL13AD PE=2 SV=...	[more]
Q9SFU1	1.7e-102	87.86	60S ribosomal protein L13a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL13AA PE=2 SV=...	[more]
Q9LRX8	2.9e-102	89.81	60S ribosomal protein L13a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL13AB PE=2 SV=...	[more]
Q9SVR0	6.6e-102	87.86	60S ribosomal protein L13a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL13AC PE=2 SV=...	[more]
O49885	5.4e-96	83.01	60S ribosomal protein L13a OS=Lupinus luteus OX=3873 GN=RPL13A PE=2 SV=1	[more]

BLAST of Lag0016427 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HHD3	1.5e-109	99.51	60S ribosomal protein L13a-4 OS=Cucurbita moschata OX=3662 GN=LOC111464335 PE=3 ...	[more]
A0A1S3C555	2.6e-109	99.03	60S ribosomal protein L13a-4 OS=Cucumis melo OX=3656 GN=LOC103496971 PE=3 SV=1	[more]
A0A5A7SQ28	2.6e-109	99.03	60S ribosomal protein L13a-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0LL54	2.6e-109	99.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G138710 PE=3 SV=1	[more]
A0A6J1KEC1	3.4e-109	99.03	60S ribosomal protein L13a-4 OS=Cucurbita maxima OX=3661 GN=LOC111494221 PE=3 SV...	[more]

BLAST of Lag0016427 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48760.1	6.5e-105	89.32	Ribosomal protein L13 family protein	[more]
AT5G48760.2	6.5e-105	89.32	Ribosomal protein L13 family protein	[more]
AT3G07110.1	1.2e-103	87.86	Ribosomal protein L13 family protein	[more]
AT3G24830.1	2.1e-103	89.81	Ribosomal protein L13 family protein	[more]
AT4G13170.1	4.7e-103	87.86	Ribosomal protein L13 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 205..225
None	No IPR available	GENE3D	6.10.250.3250		coord: 202..252 e-value: 3.6E-14 score: 54.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	PANTHER	PTHR11545:SF20	60S RIBOSOMAL PROTEIN L13A-1-RELATED	coord: 47..252
IPR005755	Ribosomal protein L13, eukaryotic/archaeal	TIGRFAM	TIGR01077	TIGR01077	coord: 58..199 e-value: 1.1E-52 score: 176.1
IPR005822	Ribosomal protein L13	PFAM	PF00572	Ribosomal_L13	coord: 56..161 e-value: 3.5E-26 score: 91.7
IPR005822	Ribosomal protein L13	PANTHER	PTHR11545	RIBOSOMAL PROTEIN L13	coord: 47..252
IPR005822	Ribosomal protein L13	HAMAP	MF_01366	Ribosomal_L13	coord: 57..181 score: 19.066811
IPR005822	Ribosomal protein L13	CDD	cd00392	Ribosomal_L13	coord: 58..159 e-value: 6.1268E-41 score: 134.554
IPR036899	Ribosomal protein L13 superfamily	GENE3D	3.90.1180.10	Ribosomal protein L13	coord: 54..200 e-value: 1.0E-60 score: 205.9
IPR036899	Ribosomal protein L13 superfamily	SUPERFAMILY	52161	Ribosomal protein L13	coord: 58..200
IPR023563	Ribosomal protein L13, conserved site	PROSITE	PS00783	RIBOSOMAL_L13	coord: 135..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0016427.1	Lag0016427.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017148	negative regulation of translation
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome