Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGCTCCTTGTGTAAGAAATTTCCTGAGACTACTGACCATGCCTTAGTGACTTGCGCACGAGCGAAGCGGTTGTGGAAGACTTTACTGCCGCAGGTTGATTGGTCGCTGAACTTCAACAGTAGTTTTTGGGATCGATGTTTATTTTTACAAGGACTTTTGTCAGTTTCGGATTTTGGGTTGTGGTGTGTTGGTTGTTGGGCATGGTGGAATGATAGGAATGCGTATTTGAACGGTTCGATCCTCCCGGCTATCCCTGTTAAAGCTGAGTGGGTTGGCAAGTATTTGGGTTCCTTTTCCTCTGTGCATGAGAGTCGAAGGTCGGATATTTGTGGGTCTATTGTTCAAGGGCCAGTTTCAGTTTCGCAGTGGGTCTGTCCTCCCCAGGGCTGGTTCAAAATTAATGTTGATGCTTCCTGTTCATCAAAGTATAGTCTGACTGGCGTCGGCGTGGTTGTTCGAACGGCGTCGGGTCGTTTGCATGCTGCCCAATTGGAGGTCGTTCCTATTGTTCTTGCTCCTTTGCTCGCTGAAGCCCGTGCGGTACTCGTGGGTTTGAGGTTGGCACTGGTATTGGATCTCGTGTGTGTTGAGGTGGAATCAGATTGTCTTTCCCTCATTTCCATGTTGACTGGGTCCTTCATCTCCCTCCATGAAGAGGGTACTTATGTTGCTGAAATTCTTGAGTTGGCCTCTCACTTTACAAGTGTTGTTTTCCGTCACGTCCGCAGGGGAGGAAATAGGCCAGCGCACATTCTGGCCTCTCATGCTAGTGTTGAAGGTTCAATGTTGTGGTGTGCCTCTTTCCCTGAGTGGTTGACAGATGTTGTTGGTCAGGATTCTTCTCCTGCTAGTTGTAACCCTTGTGGTGATTTGATTCTCTAA
mRNA sequence
ATGTGCTCCTTGTGTAAGAAATTTCCTGAGACTACTGACCATGCCTTAGTGACTTGCGCACGAGCGAAGCGGTTGTGGAAGACTTTACTGCCGCAGGTTGATTGGTCGCTGAACTTCAACAGTAGTTTTTGGGATCGATGTTTATTTTTACAAGGACTTTTGTCAGTTTCGGATTTTGGGTTGTGGTGTGTTGGTTGTTGGGCATGGTGGAATGATAGGAATGCGTATTTGAACGGTTCGATCCTCCCGGCTATCCCTGTTAAAGCTGAGTGGGTTGGCAAGTATTTGGGTTCCTTTTCCTCTGTGCATGAGAGTCGAAGGTCGGATATTTGTGGGTCTATTGTTCAAGGGCCAGTTTCAGTTTCGCAGTGGGTCTGTCCTCCCCAGGGCTGGTTCAAAATTAATGTTGATGCTTCCTGTTCATCAAAGTATAGTCTGACTGGCGTCGGCGTGGTTGTTCGAACGGCGTCGGGTCGTTTGCATGCTGCCCAATTGGAGGTCGTTCCTATTGTTCTTGCTCCTTTGCTCGCTGAAGCCCGTGCGGTACTCGTGGGTTTGAGGTTGGCACTGGTATTGGATCTCGTGTGTGTTGAGGTGGAATCAGATTGTCTTTCCCTCATTTCCATGTTGACTGGGTCCTTCATCTCCCTCCATGAAGAGGGTACTTATGTTGCTGAAATTCTTGAGTTGGCCTCTCACTTTACAAGTGTTGTTTTCCGTCACGTCCGCAGGGGAGGAAATAGGCCAGCGCACATTCTGGCCTCTCATGCTAGTGTTGAAGGTTCAATGTTGTGGTGTGCCTCTTTCCCTGAGTGGTTGACAGATGTTGTTGGTCAGGATTCTTCTCCTGCTAGTTGTAACCCTTGTGGTGATTTGATTCTCTAA
Coding sequence (CDS)
ATGTGCTCCTTGTGTAAGAAATTTCCTGAGACTACTGACCATGCCTTAGTGACTTGCGCACGAGCGAAGCGGTTGTGGAAGACTTTACTGCCGCAGGTTGATTGGTCGCTGAACTTCAACAGTAGTTTTTGGGATCGATGTTTATTTTTACAAGGACTTTTGTCAGTTTCGGATTTTGGGTTGTGGTGTGTTGGTTGTTGGGCATGGTGGAATGATAGGAATGCGTATTTGAACGGTTCGATCCTCCCGGCTATCCCTGTTAAAGCTGAGTGGGTTGGCAAGTATTTGGGTTCCTTTTCCTCTGTGCATGAGAGTCGAAGGTCGGATATTTGTGGGTCTATTGTTCAAGGGCCAGTTTCAGTTTCGCAGTGGGTCTGTCCTCCCCAGGGCTGGTTCAAAATTAATGTTGATGCTTCCTGTTCATCAAAGTATAGTCTGACTGGCGTCGGCGTGGTTGTTCGAACGGCGTCGGGTCGTTTGCATGCTGCCCAATTGGAGGTCGTTCCTATTGTTCTTGCTCCTTTGCTCGCTGAAGCCCGTGCGGTACTCGTGGGTTTGAGGTTGGCACTGGTATTGGATCTCGTGTGTGTTGAGGTGGAATCAGATTGTCTTTCCCTCATTTCCATGTTGACTGGGTCCTTCATCTCCCTCCATGAAGAGGGTACTTATGTTGCTGAAATTCTTGAGTTGGCCTCTCACTTTACAAGTGTTGTTTTCCGTCACGTCCGCAGGGGAGGAAATAGGCCAGCGCACATTCTGGCCTCTCATGCTAGTGTTGAAGGTTCAATGTTGTGGTGTGCCTCTTTCCCTGAGTGGTTGACAGATGTTGTTGGTCAGGATTCTTCTCCTGCTAGTTGTAACCCTTGTGGTGATTTGATTCTCTAA
Protein sequence
MCSLCKKFPETTDHALVTCARAKRLWKTLLPQVDWSLNFNSSFWDRCLFLQGLLSVSDFGLWCVGCWAWWNDRNAYLNGSILPAIPVKAEWVGKYLGSFSSVHESRRSDICGSIVQGPVSVSQWVCPPQGWFKINVDASCSSKYSLTGVGVVVRTASGRLHAAQLEVVPIVLAPLLAEARAVLVGLRLALVLDLVCVEVESDCLSLISMLTGSFISLHEEGTYVAEILELASHFTSVVFRHVRRGGNRPAHILASHASVEGSMLWCASFPEWLTDVVGQDSSPASCNPCGDLIL
Homology
BLAST of Lag0016371 vs. NCBI nr
Match:
XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])
HSP 1 Score: 136.3 bits (342), Expect = 4.1e-28
Identity = 96/282 (34.04%), Postives = 135/282 (47.87%), Query Frame = 0
Query: 2 CSLCKKFPETTDHALVTCARAKRLWKTLLPQVD-WSLNFNSSFWDRCLFLQGLLSVSDFG 61
C++C E+ HA C RA+++W+TL P + S N SF + L L D
Sbjct: 1173 CTICGDRRESIIHAFFHCKRARQIWRTLFPFLTCLSAEDNISFLELWSSLTEQLEPKDLN 1232
Query: 62 LWCVGCWAWWNDRNAYLNGSILPAIPVKAEWVGKYLGSFSSVHESRRSDICGSIVQGPVS 121
L + W WNDRN+ ++G + + K EW+ +L S S S S S PV
Sbjct: 1233 LAAITGWGIWNDRNSLIHGKQVSPVEFKCEWLTPFLDSHSQAQMSNYSPRTQS-NHRPV- 1292
Query: 122 VSQWVCPPQGWFKINVDASCSSKYSLTGVGVVVRTASGRLHAAQLEVVPIVLAPLLAEAR 181
V W K+N DA+C + + T G ++R +S L AA VP L+PLLAE R
Sbjct: 1293 VQYWRPSSSVSLKLNTDAAC--RGASTSFGCIIRDSSCSLVAATSIRVPFPLSPLLAEIR 1352
Query: 182 AVLVGLRLALVLDLVCVEVESDCLSLISMLTGSFISLHEEGTYVAEILELASHFTSVVFR 241
+L GL+ A + +EVESD L I ++ + +E +V EI L F + F
Sbjct: 1353 CILEGLKFAAASNFTHLEVESDSLLAIQLIRNEIHTRGDEQNWVMEIQALTCCFAFISFS 1412
Query: 242 HVRRGGNRPAHILASH--ASVEGSMLWCASFPEWLTDVVGQD 281
H R NR AH LA S + W +FP WL D+V +D
Sbjct: 1413 HSSRQCNRAAHGLAKWGITSPSATYAWLFNFPTWLLDLVQRD 1450
BLAST of Lag0016371 vs. NCBI nr
Match:
XP_022145060.1 (uncharacterized protein LOC111014578 [Momordica charantia])
HSP 1 Score: 124.0 bits (310), Expect = 2.1e-24
Identity = 73/189 (38.62%), Postives = 97/189 (51.32%), Query Frame = 0
Query: 2 CSLCKKFPETTDHALVTCARAKRLWKTLLPQVDWSLNFNSSFWDRCLFLQGLLSVSDFGL 61
C +C K ETTDHAL C RAK +W LLPQ +FN+S D L+L LS DF L
Sbjct: 28 CLVCGKQIETTDHALFKCKRAKEVWNILLPQAFPQCDFNNSVQDGLLYLVESLSTPDFDL 87
Query: 62 WCVGCWAWWNDRNAYLNGSILPAIPVKAEWVGKYLGSFS-----SVHESRRSDICGSIVQ 121
VG WA WNDRNA +P ++++W+ Y+ F S+ + R + S
Sbjct: 88 VGVGVWAIWNDRNAIRMQRQIPDAKIRSDWILTYVRDFQVRDVPSLGDFRIQEDASS--N 147
Query: 122 GPVSVSQWVCPPQGWFKINVDASCSSKYSLTGVGVVVRTASGRLHAAQLEVVPIVLAPLL 181
+ W PP GW KINVDA+C TG+G+V R G++ AA PL+
Sbjct: 148 DRTIENYWSPPPAGWIKINVDAACKKHQFRTGIGIVCRNEKGQILAAASH------DPLM 207
Query: 182 AEARAVLVG 186
AE+ A+ G
Sbjct: 208 AESLALFDG 208
BLAST of Lag0016371 vs. NCBI nr
Match:
XP_030497600.1 (uncharacterized protein LOC115713257 [Cannabis sativa])
HSP 1 Score: 123.2 bits (308), Expect = 3.6e-24
Identity = 88/281 (31.32%), Postives = 132/281 (46.98%), Query Frame = 0
Query: 2 CSLCKKFPETTDHALVTCARAKRLWKTLLPQVDWSLNFNSSFWDRCLFLQGLLSVSDFGL 61
CSLC + E+ HAL +C AK +W+ Q+D++ D LFL +L+ S+
Sbjct: 1093 CSLCSRAWESIGHALFSCCHAKSVWQHTSFQLDFTKASFMKDGDYLLFLSTILTKSELEK 1152
Query: 62 WCVGCWAWWNDRNAYLNGSILPAIPVKAEWVGKYLGSFSSVHESRRSDICGSIVQGPVSV 121
W W+DRN Y++ L + YL +F SV + + S V
Sbjct: 1153 LFCTMWFIWSDRNNYIHCKQLKHPMAISSQAEAYLANFHSVKSATAPAV--SCVAADART 1212
Query: 122 SQWVCPPQGWFKINVDASCSSKYSLTGVGVVVRTASGRLHAAQLEVVPIVLAPLLAEARA 181
+WV P + K+NVDA+ S + G+GV++R ++GR+ AA + V EA+A
Sbjct: 1213 VKWVPPTESNLKMNVDAALDSSRNKIGIGVIIRDSTGRVIAAMSKPVVGNFKSQEMEAKA 1272
Query: 182 VLVGLRLALVLDLVCVEVESDCLSLISMLTGSFISLHEEGTYVAEILELASHFTSVVFRH 241
+ GL+ A L L VE+DCL L+ L G L V +I S F++ H
Sbjct: 1273 MFWGLQWAKQLQLQPHCVETDCLMLVHALQGKQSQLSSFHDLVEDISYHLSSFSNACISH 1332
Query: 242 VRRGGNRPAHILASHA-SVEGSMLWCASFPEWLTDVVGQDS 282
VRR N+ AH LA A ++ +W P + VV D+
Sbjct: 1333 VRRDANQAAHGLAKQALQLDNDCIWIEEIPSTIFSVVVNDT 1371
BLAST of Lag0016371 vs. NCBI nr
Match:
XP_030502555.1 (uncharacterized protein LOC115717715 [Cannabis sativa])
HSP 1 Score: 121.7 bits (304), Expect = 1.1e-23
Identity = 87/282 (30.85%), Postives = 135/282 (47.87%), Query Frame = 0
Query: 2 CSLCKKFPETTDHALVTCARAKRLWKTLLPQVDWSLNFNSSFWDRCLFLQGLLSVSDFGL 61
CSLC + E+ HAL +C AK +W+ Q+D+ D +FL +L+ S+
Sbjct: 1093 CSLCSRVWESIGHALFSCCHAKAVWQNTGFQLDFQKASYMKDGDYLMFLSTILTNSELER 1152
Query: 62 WCVGCWAWWNDRNAYLNGSILPAIPVKAEWVGKYLGSFSSVHESRRSDICGSIVQGPVSV 121
W W+DRN +++G L + YL +F+SV ++ V V+
Sbjct: 1153 LFCTMWFIWSDRNNFIHGKQLKQPMAISSQAEAYLANFNSV--QLQATPATFRVAADVNR 1212
Query: 122 SQWVCPPQGWFKINVDASCSSKYSLTGVGVVVRTASGRLHAAQLEVVPIVLAPLLAEARA 181
+W PP+ K+NVDA+ S S G+GV++R +SG + AA + EA+A
Sbjct: 1213 VKWTPPPETKLKMNVDAAIDSSRSKIGMGVIIRDSSGSVVAAMSKPAVGNFKSQEMEAKA 1272
Query: 182 VLVGLRLALVLDLVCVEVESDCLSLISMLTGSFISLHEEGTYVAEILELASHFTSVVFRH 241
+ GL+LA L L VE+DCL L++ + G+ V +I S ++ H
Sbjct: 1273 MFWGLQLAEQLQLQLHYVETDCLMLVTAINGAQSQHSSFHDLVKDISYHLSSSSNACISH 1332
Query: 242 VRRGGNRPAHILASHA-SVEGSMLWCASFPEWLTDVVGQDSS 283
VRR N+ AH LA A ++ +W P + VV +DSS
Sbjct: 1333 VRRDANQAAHGLAKQALQLDNDCIWIEEIPSSIFSVVVKDSS 1372
BLAST of Lag0016371 vs. NCBI nr
Match:
XP_023880683.1 (uncharacterized protein LOC111993063 [Quercus suber])
HSP 1 Score: 118.6 bits (296), Expect = 8.9e-23
Identity = 85/287 (29.62%), Postives = 127/287 (44.25%), Query Frame = 0
Query: 1 MCSLCKKFPETTDHALVTCARAKRLW---KTLLPQVD-WSLNFNSSFWDRCLFLQGLLSV 60
+C C++ PET H L +C +AK W K + D +L F W+ L L G
Sbjct: 10 LCESCREAPETVGHVLWSCPKAKEAWECSKLAIGGFDGQNLTFQDLMWE--LLLNGEAGE 69
Query: 61 SDFGLWCVGCWAWWNDRNAYLNGSILPAIPVKAEWVGKYLGSFSSVHESR--RSDICGSI 120
WA W++RN G + + W YL +++ E + R +
Sbjct: 70 DKVAHAATTAWALWHNRNEIRCGGARKSGQQLSRWATDYLREYNAAAEVKIPRESV---- 129
Query: 121 VQGPVSVSQWVCPPQGWFKINVDASCSSKYSLTGVGVVVRTASGRLHAAQLEVVPIVLAP 180
P V+ W P G FKINVD + + GVGVV+R GRL AA + +
Sbjct: 130 ---PRQVAFWSPPRNGHFKINVDGAVFAAQKAVGVGVVIRDDEGRLEAALCRKITAPMGA 189
Query: 181 LLAEARAVLVGLRLALVLDLVCVEVESDCLSLISMLTGSFISLHEEGTYVAEILELASHF 240
+ AEA+A GL A + + + +E D L + + L + V I++++ F
Sbjct: 190 VEAEAKAFEAGLLFAKAVGVRDIILEGDSLVVYNALCNISSPPSSIASIVQGIVDMSGEF 249
Query: 241 TSVVFRHVRRGGNRPAHILASHAS-VEGSMLWCASFPEWLTDVVGQD 281
SV + H+RR GN PAHILA HAS + + W P + + D
Sbjct: 250 RSVSYSHIRRQGNVPAHILAKHASGITNYIAWIEEDPCCIAQALSHD 287
BLAST of Lag0016371 vs. ExPASy TrEMBL
Match:
A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)
HSP 1 Score: 136.3 bits (342), Expect = 2.0e-28
Identity = 96/282 (34.04%), Postives = 135/282 (47.87%), Query Frame = 0
Query: 2 CSLCKKFPETTDHALVTCARAKRLWKTLLPQVD-WSLNFNSSFWDRCLFLQGLLSVSDFG 61
C++C E+ HA C RA+++W+TL P + S N SF + L L D
Sbjct: 1173 CTICGDRRESIIHAFFHCKRARQIWRTLFPFLTCLSAEDNISFLELWSSLTEQLEPKDLN 1232
Query: 62 LWCVGCWAWWNDRNAYLNGSILPAIPVKAEWVGKYLGSFSSVHESRRSDICGSIVQGPVS 121
L + W WNDRN+ ++G + + K EW+ +L S S S S S PV
Sbjct: 1233 LAAITGWGIWNDRNSLIHGKQVSPVEFKCEWLTPFLDSHSQAQMSNYSPRTQS-NHRPV- 1292
Query: 122 VSQWVCPPQGWFKINVDASCSSKYSLTGVGVVVRTASGRLHAAQLEVVPIVLAPLLAEAR 181
V W K+N DA+C + + T G ++R +S L AA VP L+PLLAE R
Sbjct: 1293 VQYWRPSSSVSLKLNTDAAC--RGASTSFGCIIRDSSCSLVAATSIRVPFPLSPLLAEIR 1352
Query: 182 AVLVGLRLALVLDLVCVEVESDCLSLISMLTGSFISLHEEGTYVAEILELASHFTSVVFR 241
+L GL+ A + +EVESD L I ++ + +E +V EI L F + F
Sbjct: 1353 CILEGLKFAAASNFTHLEVESDSLLAIQLIRNEIHTRGDEQNWVMEIQALTCCFAFISFS 1412
Query: 242 HVRRGGNRPAHILASH--ASVEGSMLWCASFPEWLTDVVGQD 281
H R NR AH LA S + W +FP WL D+V +D
Sbjct: 1413 HSSRQCNRAAHGLAKWGITSPSATYAWLFNFPTWLLDLVQRD 1450
BLAST of Lag0016371 vs. ExPASy TrEMBL
Match:
A0A803NGI9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 132.1 bits (331), Expect = 3.8e-27
Identity = 85/281 (30.25%), Postives = 135/281 (48.04%), Query Frame = 0
Query: 2 CSLCKKFPETTDHALVTCARAKRLWKTLLPQVDWSLNFNSSFWDRCLFLQGLLSVSDFGL 61
CSLC E+ +HAL C AK++W+ +++ L SF D + L L S S+
Sbjct: 847 CSLCSNAWESVEHALFLCKHAKKVWRVAGISLNFDLVSRMSFADFLMLLSTLKSTSEMEQ 906
Query: 62 WCVGCWAWWNDRNAYLNGSILPAIPVKAEWVGKYLGSFSSVHESRRSDICGSIVQGPVSV 121
W WNDRN +++G P + W K + F + + S G +
Sbjct: 907 LLCTLWFLWNDRNNFIHGK--PGLSPTQLW-AKSVAYFCNFQQQSTSSKSIRDSTGAAAQ 966
Query: 122 SQWVCPPQGWFKINVDASCSSKYSLTGVGVVVRTASGRLHAAQLEVVPIVLAPLLAEARA 181
W+ PP K+NVDA+C + GVG+++R +SG++ AA + + L P EA+A
Sbjct: 967 PHWISPPLDKLKMNVDAACDISRNKIGVGIIIRNSSGQVVAAYSKPLTGRLKPQEMEAKA 1026
Query: 182 VLVGLRLALVLDLVCVEVESDCLSLISMLTGSFISLHEEGTYVAEILELASHFTSVVFRH 241
+L+G+ A +L ESD L L++ + ++ G V +I S+ +SV H
Sbjct: 1027 LLIGINWAARCNLSINLFESDSLILVNSINSISNAISSFGDLVLDIKNRLSYLSSVCVSH 1086
Query: 242 VRRGGNRPAHILASHA-SVEGSMLWCASFPEWLTDVVGQDS 282
V+R N+ AH LA HA ++ +W P + VV D+
Sbjct: 1087 VKRDANQAAHGLAKHALELDDDCMWFEEIPSTIFSVVVNDA 1124
BLAST of Lag0016371 vs. ExPASy TrEMBL
Match:
A0A6J1CTE3 (uncharacterized protein LOC111014578 OS=Momordica charantia OX=3673 GN=LOC111014578 PE=4 SV=1)
HSP 1 Score: 124.0 bits (310), Expect = 1.0e-24
Identity = 73/189 (38.62%), Postives = 97/189 (51.32%), Query Frame = 0
Query: 2 CSLCKKFPETTDHALVTCARAKRLWKTLLPQVDWSLNFNSSFWDRCLFLQGLLSVSDFGL 61
C +C K ETTDHAL C RAK +W LLPQ +FN+S D L+L LS DF L
Sbjct: 28 CLVCGKQIETTDHALFKCKRAKEVWNILLPQAFPQCDFNNSVQDGLLYLVESLSTPDFDL 87
Query: 62 WCVGCWAWWNDRNAYLNGSILPAIPVKAEWVGKYLGSFS-----SVHESRRSDICGSIVQ 121
VG WA WNDRNA +P ++++W+ Y+ F S+ + R + S
Sbjct: 88 VGVGVWAIWNDRNAIRMQRQIPDAKIRSDWILTYVRDFQVRDVPSLGDFRIQEDASS--N 147
Query: 122 GPVSVSQWVCPPQGWFKINVDASCSSKYSLTGVGVVVRTASGRLHAAQLEVVPIVLAPLL 181
+ W PP GW KINVDA+C TG+G+V R G++ AA PL+
Sbjct: 148 DRTIENYWSPPPAGWIKINVDAACKKHQFRTGIGIVCRNEKGQILAAASH------DPLM 207
Query: 182 AEARAVLVG 186
AE+ A+ G
Sbjct: 208 AESLALFDG 208
BLAST of Lag0016371 vs. ExPASy TrEMBL
Match:
A0A803PIB6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 123.2 bits (308), Expect = 1.8e-24
Identity = 88/281 (31.32%), Postives = 132/281 (46.98%), Query Frame = 0
Query: 2 CSLCKKFPETTDHALVTCARAKRLWKTLLPQVDWSLNFNSSFWDRCLFLQGLLSVSDFGL 61
CSLC + E+ HAL +C AK +W+ Q+D++ D LFL +L+ S+
Sbjct: 1553 CSLCSRAWESIGHALFSCCHAKSVWQHTSFQLDFTKASFMKDGDYLLFLSTILTKSELEK 1612
Query: 62 WCVGCWAWWNDRNAYLNGSILPAIPVKAEWVGKYLGSFSSVHESRRSDICGSIVQGPVSV 121
W W+DRN Y++ L + YL +F SV + + S V
Sbjct: 1613 LFCTMWFIWSDRNNYIHCKQLKHPMAISSQAEAYLANFHSVKSATAPAV--SCVAADART 1672
Query: 122 SQWVCPPQGWFKINVDASCSSKYSLTGVGVVVRTASGRLHAAQLEVVPIVLAPLLAEARA 181
+WV P + K+NVDA+ S + G+GV++R ++GR+ AA + V EA+A
Sbjct: 1673 VKWVPPTESNLKMNVDAALDSSRNKIGIGVIIRDSTGRVIAAMSKPVVGNFKSQEMEAKA 1732
Query: 182 VLVGLRLALVLDLVCVEVESDCLSLISMLTGSFISLHEEGTYVAEILELASHFTSVVFRH 241
+ GL+ A L L VE+DCL L+ L G L V +I S F++ H
Sbjct: 1733 MFWGLQWAKQLQLQPHCVETDCLMLVHALQGKQSQLSSFHDLVEDISYHLSSFSNACISH 1792
Query: 242 VRRGGNRPAHILASHA-SVEGSMLWCASFPEWLTDVVGQDS 282
VRR N+ AH LA A ++ +W P + VV D+
Sbjct: 1793 VRRDANQAAHGLAKQALQLDNDCIWIEEIPSTIFSVVVNDT 1831
BLAST of Lag0016371 vs. ExPASy TrEMBL
Match:
A0A803NI87 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 117.5 bits (293), Expect = 9.6e-23
Identity = 80/260 (30.77%), Postives = 124/260 (47.69%), Query Frame = 0
Query: 2 CSLCKKFPETTDHALVTCARAKRLWKTLLPQVDWSLNFNSSFWDRCLFLQGLLSVSDFGL 61
CSLC E+ HAL+ C AK++W + +D+ + F D + L L + S+
Sbjct: 754 CSLCSNAWESIKHALLLCKHAKKVWHSAGYSLDYDMLARMKFSDCLVLLSTLKTTSEMEQ 813
Query: 62 WCVGCWAWWNDRNAYLNGSILPAIPVKAEWV--GKYLGSFSSVHESRRSDICGSIVQGPV 121
W W DRN Y++G P + W Y +F + S + I G
Sbjct: 814 MFCTMWFLWTDRNNYIHGK--PVLSPSQIWAKSAAYYCNFQHHSTIQNSPM---ISTGAA 873
Query: 122 SVSQWVCPPQGWFKINVDASCSSKYSLTGVGVVVRTASGRLHAAQLEVVPIVLAPLLAEA 181
+ S+W+ PP K+NVDA+C + GVG++VR +SG++ AA + EA
Sbjct: 874 TQSKWIRPPLNELKMNVDAACDVSRNKIGVGIIVRNSSGQIVAAYSKSFTGRYKSQEMEA 933
Query: 182 RAVLVGLRLALVLDLVCVEVESDCLSLISMLTGSFISLHEEGTYVAEILELASHFTSVVF 241
+A+L GL A +L+ +ESD L L++ + ++ G V +I S+ +SV
Sbjct: 934 KALLTGLDWAAHHNLLVSTLESDSLVLVNSINSQSTAISSFGDLVLDIKNRLSYLSSVCV 993
Query: 242 RHVRRGGNRPAHILASHASV 260
HV+R N+ AH LA A V
Sbjct: 994 SHVKRDANQAAHGLAKQALV 1008
BLAST of Lag0016371 vs. TAIR 10
Match:
AT3G09510.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 71.6 bits (174), Expect = 1.2e-12
Identity = 77/300 (25.67%), Postives = 128/300 (42.67%), Query Frame = 0
Query: 2 CSLCKKFPETTDHALVTCARAKRLWK----TLLPQVDWSLNFNSSFWDRCLFLQGLLSVS 61
C C + E+ +HAL TC A W+ +L+ S +F + + F+Q ++S
Sbjct: 200 CPRCHRENESINHALFTCPFATMAWRLSDSSLIRNQLMSNDFEENISNILNFVQD-TTMS 259
Query: 62 DF----GLWCVGCWAWWNDRNAYL--------NGSILPAIPVKAEWVGKYLGSFSSVHES 121
DF +W + W W RN + + ++L A +W+ + +
Sbjct: 260 DFHKLLPVWLI--WRIWKARNNVVFNKFRESPSKTVLSAKAETHDWLNATQSHKKTPSPT 319
Query: 122 RRSDICGSIVQGPVSVSQWVCPPQGWFKINVDASCS-SKYSLTGVGVVVRTASGRLHAAQ 181
R+ I + + +W PP + K N DA K TG G ++R G +
Sbjct: 320 RQ------IAENKI---EWRNPPATYVKCNFDAGFDVQKLEATG-GWIIRNHYGTPISWG 379
Query: 182 LEVVPIVLAPLLAEARAVLVGLRLALVLDLVCVEVESDCLSLISMLTGSFISLHEE-GTY 241
+ PL AE +A+L L+ + V +E DC +LI+++ G IS H +
Sbjct: 380 SMKLAHTSNPLEAETKALLAALQQTWIRGYTQVFMEGDCQTLINLING--ISFHSSLANH 439
Query: 242 VAEILELASHFTSVVFRHVRRGGNRPAHILASHASVEGSML-WCASFPEWLTDVVGQDSS 283
+ +I A+ F S+ F +RR GN+ AH+LA + + S P WL DS+
Sbjct: 440 LEDISFWANKFASIQFGFIRRKGNKLAHVLAKYGCTYSTFYSGSGSLPIWLDRYFCNDSN 484
BLAST of Lag0016371 vs. TAIR 10
Match:
AT2G13980.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 47.8 bits (112), Expect = 1.8e-05
Identity = 41/134 (30.60%), Postives = 67/134 (50.00%), Query Frame = 0
Query: 122 SQWVCPPQGWFKINVDASCSSKYSLTGVGVVVRTASG-RLHAAQLEVVPIVLAPLLAEAR 181
++W PP K N DA + + + ++R G H L+ + PL AE +
Sbjct: 11 TKWKAPPDTHIKCNYDAGFNVQNLDSTARWIIRNHDGIAQHWGSLQ-LDNTSTPLEAETK 70
Query: 182 AVLVGLRLALVLDLVCVEVESDCLSLISMLTGSFISLHEEGTYVAEILELASHFTSVVFR 241
A+L L+ + + V +E DC +L ++++GS S + + +I A F++V F
Sbjct: 71 ALLAALQQTWIRGYLRVIMEGDCETLTNLVSGS-SSHNHLANLLDDIRIWAKKFSNVQFS 130
Query: 242 HVRRGGNRPAHILA 255
VRRGGN+ AH LA
Sbjct: 131 FVRRGGNKVAHELA 142
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DX30 | 2.0e-28 | 34.04 | uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A803NGI9 | 3.8e-27 | 30.25 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A6J1CTE3 | 1.0e-24 | 38.62 | uncharacterized protein LOC111014578 OS=Momordica charantia OX=3673 GN=LOC111014... | [more] |
A0A803PIB6 | 1.8e-24 | 31.32 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803NI87 | 9.6e-23 | 30.77 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT3G09510.1 | 1.2e-12 | 25.67 | Ribonuclease H-like superfamily protein | [more] |
AT2G13980.1 | 1.8e-05 | 30.60 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |