Lag0016360 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0016360
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Description5-oxoprolinase
Locationchr12: 36796068 .. 36796598 (+)
RNA-Seq ExpressionLag0016360
SyntenyLag0016360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACATATTTGATGGAAGAACGAAAAGAGGACCCGAGAATTTTCATCATCTCCGGGTTGATGTTCTTATGCGTTATCTGTGGCGGTCTCCTCCTTAGCCTCTACCTTTTCCTCCCCGAATCGCAATCGAACGATTGGTATTCGGTCGTCGGGATCGCGTTGGTTGCAACTCCCTGGATCTTTTGGTTTCTGGTTTATTTGTATCATTGCTTCAAACCGGTCACCAAAGTGCAATTCAGTGGCTATACCACCTCATCAAGCAACAAGGCACCACCTTCCAAAAGTAGTGGTGGTGGTGCAACCATTGTAGCCAATCTTCCTGAGGTTGAATCTCCTGTTAGTGATTCGCCTGGTGGGGGGAAACGCCGTGTGCATTTTGGAGCTGTGGTTGTCAATGAAAACCAGCCACAAGTAGGTAGAAATAGCCATGAAAGCCCGACAAAAGAACCTACAAACGCTGCCCTGAGTTCGAGGGAAAGCGAAGCGCCGTTAAGGTCGTCGTCGTCGTCGTCGTCGTCGTTATCTTCATAG

mRNA sequence

ATGACATATTTGATGGAAGAACGAAAAGAGGACCCGAGAATTTTCATCATCTCCGGGTTGATGTTCTTATGCGTTATCTGTGGCGGTCTCCTCCTTAGCCTCTACCTTTTCCTCCCCGAATCGCAATCGAACGATTGGTATTCGGTCGTCGGGATCGCGTTGGTTGCAACTCCCTGGATCTTTTGGTTTCTGGTTTATTTGTATCATTGCTTCAAACCGGTCACCAAAGTGCAATTCAGTGGCTATACCACCTCATCAAGCAACAAGGCACCACCTTCCAAAAGTAGTGGTGGTGGTGCAACCATTGTAGCCAATCTTCCTGAGGTTGAATCTCCTGTTAGTGATTCGCCTGGTGGGGGGAAACGCCGTGTGCATTTTGGAGCTGTGGTTGTCAATGAAAACCAGCCACAAGTAGGTAGAAATAGCCATGAAAGCCCGACAAAAGAACCTACAAACGCTGCCCTGAGTTCGAGGGAAAGCGAAGCGCCGTTAAGGTCGTCGTCGTCGTCGTCGTCGTCGTTATCTTCATAG

Coding sequence (CDS)

ATGACATATTTGATGGAAGAACGAAAAGAGGACCCGAGAATTTTCATCATCTCCGGGTTGATGTTCTTATGCGTTATCTGTGGCGGTCTCCTCCTTAGCCTCTACCTTTTCCTCCCCGAATCGCAATCGAACGATTGGTATTCGGTCGTCGGGATCGCGTTGGTTGCAACTCCCTGGATCTTTTGGTTTCTGGTTTATTTGTATCATTGCTTCAAACCGGTCACCAAAGTGCAATTCAGTGGCTATACCACCTCATCAAGCAACAAGGCACCACCTTCCAAAAGTAGTGGTGGTGGTGCAACCATTGTAGCCAATCTTCCTGAGGTTGAATCTCCTGTTAGTGATTCGCCTGGTGGGGGGAAACGCCGTGTGCATTTTGGAGCTGTGGTTGTCAATGAAAACCAGCCACAAGTAGGTAGAAATAGCCATGAAAGCCCGACAAAAGAACCTACAAACGCTGCCCTGAGTTCGAGGGAAAGCGAAGCGCCGTTAAGGTCGTCGTCGTCGTCGTCGTCGTCGTTATCTTCATAG

Protein sequence

MTYLMEERKEDPRIFIISGLMFLCVICGGLLLSLYLFLPESQSNDWYSVVGIALVATPWIFWFLVYLYHCFKPVTKVQFSGYTTSSSNKAPPSKSSGGGATIVANLPEVESPVSDSPGGGKRRVHFGAVVVNENQPQVGRNSHESPTKEPTNAALSSRESEAPLRSSSSSSSSLSS
Homology
BLAST of Lag0016360 vs. NCBI nr
Match: KAG7026101.1 (hypothetical protein SDJN02_12600, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 187.6 bits (475), Expect = 9.3e-44
Identity = 105/166 (63.25%), Postives = 124/166 (74.70%), Query Frame = 0

Query: 5   MEERKEDPRIFIISGLMFLCVICGGLLLSLYLFLPESQSNDWYSVVGIALVATPWIFWFL 64
           MEERK D RI IISGLMFLCV+ GG LL LYLF+PES+S DWYSVVGI LV+TPW+FWFL
Sbjct: 1   MEERKGDARILIISGLMFLCVVAGGFLLCLYLFVPESESQDWYSVVGIILVSTPWMFWFL 60

Query: 65  VYLYHCFKPVTKVQFSGYTTSSSNKAPPSKSSGGGATIVANLPEVESPVSDSPGGGKRRV 124
           VYLYHC KP+     +  + SSS+  PPS ++ GG  IVANLP+VESP  D+PG GKRRV
Sbjct: 61  VYLYHCLKPIRVQSNAALSHSSSSNRPPSAANKGGG-IVANLPQVESPDCDTPGDGKRRV 120

Query: 125 HFGAVVVNENQPQVG-RNSHESPTKEPTNAALSSRESEAPLRSSSS 170
           HFGAVVV  N+PQ G ++SH+S +KE     L S ES A   +SSS
Sbjct: 121 HFGAVVVKGNKPQGGKKSSHDSGSKE-----LRSNESGATSPTSSS 160

BLAST of Lag0016360 vs. NCBI nr
Match: XP_038875814.1 (uncharacterized protein LOC120068181 [Benincasa hispida])

HSP 1 Score: 186.0 bits (471), Expect = 2.7e-43
Identity = 108/172 (62.79%), Postives = 125/172 (72.67%), Query Frame = 0

Query: 5   MEERKEDPRIFIISGLMFLCVICGGLLLSLYLFLPESQSNDWYSVVGIALVATPWIFWFL 64
           MEERK D RIFIISGL+FLC+I GG+LL LYLFLPESQ+ DWY +VGI LV+TPWIFW  
Sbjct: 1   MEERKGDARIFIISGLIFLCIISGGILLCLYLFLPESQTPDWYPIVGIVLVSTPWIFWLS 60

Query: 65  VYLYHCFKPVTKVQFSGY----TTSSSNKAPPSKSSGGGATIVANLPEVESPVSDSPGGG 124
           +Y YHC KP TKVQ + +      S S K   +  + GGATI  NL EVE     SPG G
Sbjct: 61  IYFYHCLKP-TKVQLNAFGPNNNNSHSKKTEAANYNDGGATIEGNLGEVE-----SPGEG 120

Query: 125 KRRVHFGAVVVNENQPQVGRN-SHESPTKEPTNAALSSRESEAPLRSSSSSS 172
           KRRVHFGAVVV E QPQ+ RN SHES +K+PT   +S RE+E PLRSS+SSS
Sbjct: 121 KRRVHFGAVVVMEKQPQLDRNYSHESQSKQPT--TMSPRETEVPLRSSTSSS 164

BLAST of Lag0016360 vs. NCBI nr
Match: XP_023000624.1 (uncharacterized protein LOC111494867 [Cucurbita maxima])

HSP 1 Score: 183.3 bits (464), Expect = 1.8e-42
Identity = 104/166 (62.65%), Postives = 120/166 (72.29%), Query Frame = 0

Query: 5   MEERKEDPRIFIISGLMFLCVICGGLLLSLYLFLPESQSNDWYSVVGIALVATPWIFWFL 64
           MEERK D  I IISGLMFLCV+ GGLLL LYLF+PES+S DWYSVVGI LV+TPWIFWFL
Sbjct: 1   MEERKGDATILIISGLMFLCVVAGGLLLCLYLFVPESESQDWYSVVGIILVSTPWIFWFL 60

Query: 65  VYLYHCFKPVTKVQFSGYTTSSSNKAPPSKSSGGGATIVANLPEVESPVSDSPGGGKRRV 124
           VYLYHC KP+     +    SSS+  PPS ++  G  IVANLP+VESP  D+PG GKRRV
Sbjct: 61  VYLYHCLKPIRLQSNAALKHSSSSNRPPSAANNSGG-IVANLPQVESPDCDTPGDGKRRV 120

Query: 125 HFGAVVVNENQPQVG-RNSHESPTKEPTNAALSSRESEAPLRSSSS 170
           HFGAVVV  N PQ G ++SH+S +KE     L S ES A   + SS
Sbjct: 121 HFGAVVVKGNNPQGGKKSSHDSSSKE-----LRSNESGATSPTLSS 160

BLAST of Lag0016360 vs. NCBI nr
Match: KAG6593768.1 (hypothetical protein SDJN03_13244, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 162.9 bits (411), Expect = 2.5e-36
Identity = 92/150 (61.33%), Postives = 111/150 (74.00%), Query Frame = 0

Query: 21  MFLCVICGGLLLSLYLFLPESQSNDWYSVVGIALVATPWIFWFLVYLYHCFKPVTKVQFS 80
           MFLCV+ GG LL LYLF+PES+S DWYSVVGI LV+TPW+FWFLVYLYHC KP+     +
Sbjct: 1   MFLCVVAGGFLLCLYLFVPESESQDWYSVVGIILVSTPWMFWFLVYLYHCLKPIRVQSNA 60

Query: 81  GYTTSSSNKAPPSKSSGGGATIVANLPEVESPVSDSPGGGKRRVHFGAVVVNENQPQVG- 140
             + SSS+  PPS ++ GG  IVANLP+VESP  D+PG GKRRVHFGAVVV  N+PQ G 
Sbjct: 61  TLSHSSSSNRPPSAANKGGG-IVANLPQVESPDCDTPGDGKRRVHFGAVVVKGNKPQGGK 120

Query: 141 RNSHESPTKEPTNAALSSRESEAPLRSSSS 170
           ++SH+S +KE     L S ES A   +SSS
Sbjct: 121 KSSHDSGSKE-----LRSNESGATSPTSSS 144

BLAST of Lag0016360 vs. NCBI nr
Match: XP_022155761.1 (uncharacterized protein LOC111022806 [Momordica charantia])

HSP 1 Score: 159.5 bits (402), Expect = 2.7e-35
Identity = 95/174 (54.60%), Postives = 110/174 (63.22%), Query Frame = 0

Query: 1   MTYLMEERKEDPRIFIISGLMFLCVICGGLLLSLYLFLPESQSNDWYSVVGIALVATPWI 60
           MTYLMEERK D RI IISG++FLC+I GGLLL LYL+LP+S+S DWY +VGI LVATPWI
Sbjct: 1   MTYLMEERKGDARILIISGVIFLCIISGGLLLGLYLYLPQSESTDWYPIVGIVLVATPWI 60

Query: 61  FWFLVYLYHCFKPVTKVQ---FSGYTTSSSNKAPPSKSSGGGATIVANLPEVESPVSDSP 120
           FW LVYLYHCFKP  + Q   F+ +  SS+N+APP+ +  G           ESP  DSP
Sbjct: 61  FWLLVYLYHCFKPAAQPQPPRFNAF-NSSTNRAPPAANPSG----------AESPNCDSP 120

Query: 121 GGGKRRVHFGAVVVNENQPQVGRNSHESPTKEPTNAALSSRESEAPLRSSSSSS 172
           GGGKRRVHFG                +S T    N     RESE PL  S SSS
Sbjct: 121 GGGKRRVHFGT---------TREEGMDSNTNGGNNHEKCPRESELPLSPSISSS 154

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7026101.19.3e-4463.25hypothetical protein SDJN02_12600, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_038875814.12.7e-4362.79uncharacterized protein LOC120068181 [Benincasa hispida][more]
XP_023000624.11.8e-4262.65uncharacterized protein LOC111494867 [Cucurbita maxima][more]
KAG6593768.12.5e-3661.33hypothetical protein SDJN03_13244, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022155761.12.7e-3554.60uncharacterized protein LOC111022806 [Momordica charantia][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..176
NoneNo IPR availablePANTHERPTHR34964:SF1MEMBRANE LIPOPROTEIN-RELATEDcoord: 5..169
NoneNo IPR availablePANTHERPTHR34964MEMBRANE LIPOPROTEIN-RELATEDcoord: 5..169

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0016360.1Lag0016360.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane