Lag0016354 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0016354
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr12: 36745676 .. 36748229 (-)
RNA-Seq ExpressionLag0016354
SyntenyLag0016354
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTGTGGTAAGCGGCTTTGGATATGAGGAATTCCTAAAAAAAAAGGGAGCTATGCCAAGAGATCACTACTTTGATACGGTTGGTTCCATTGGTCATTCTGGAAGCTTCATTGATAGATGGATCAAAATTGACTCGAGCTCATCTTTGAAAGACCTCGAGCTTGTAGCTGTCTCCTGTTGGGCAGTTTGGAATGATAGGAAACAAACTGGTTCATGGTGAATCAATTCCCCTTGTCTCTATCAAATTAAATGTAGATGGATAAAGAATTGCCTCGAGTCTTTTAAGAAGGCAGATTCTAGAGTGGCCTCAAATCAAGCGATCAATTGCTCTCATGCTTCAAGTTCGAGCCGTCTTGCTCCCTAGTCTTCCCCCTGTGGAGGGTTTCTGGAAGCTAAATTCAGATGCTCCATGTTTCCCATCCCCCCATCGACAGGTCTATGGTTGATTTGTAGCGTTTTCGTTGGGATGCTCCAAGTTGAAGGTGGAAACAAATTGTTTAATGGCCATCAAATTTATCAAAAAGTTCTCAAAGGTGATATCTGGGATTTGATTCCCTTGTTTAGGAAAATAGATTTTTCTTTTATTCCCAAGGGATCGGAGTGTAATAATGTTGCAGACATTTTGGCTAAGCATGCTAGATCATAGAGAGTTAATGAGACTTGGGTCCGTCATTACCCAAGTTAGTTATGTAATGATCAGGTCGAGGTTGACCATCTTTTTTCTGTCCATGTGGCGTAAATAAATATGATTTTCTTTTTTAAAAAAAAAAGACGGGTAAAATACAGGCAATTTCAAGCAACTTTTACGGACTTTCAAAAAGATATTTGCTATAAGGAATTTCTTTTCAAAGGAAAAATATGTTCTCCATTTATTTGGTTACGGATTGTTGATTCGATATCTTTTCTCTCATTTTGAAGTTTGATTTGTAAGTTGATTTTGCACTAGAGCATAGTTCAACGGTATAAAGTTGTATCGATGACCATGAGATCTGTGGTTCGTATTCTTCCACCCCACATATTGTAAAAAAATAAATAAAAAATAAAAAATCAAATTTGTAAGTAGATTTTTGTACATTTTTCTTAAAAGATTTTTTTAGCATTTGATATGTATTAGTTTTTAACGCACGTGAAATAATTTGTGGGAAAAATTATGAACTAAAATGAATTTAAAACTAATTAAGATTAGTTCTATACATTAAATTACGAAATTTCATTCTGAAATTTGTAAACTAATTATGTAATTATCTGAAATTTAAAAAGTATTCAGGTCTAAAAATATTTTTCAGAAATCTTGGCATTTTAATATAGTATCGATCTTATAAACAAAAAAGTTGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACAATTCTTCTTATTTTTCAATTGAAGAAACTTACTTTATTGATTTAGGTCATTTAAAAGAAAAAACATAACATAAAAGTTTAAATGTGTATAAAACTAATAGGGAAAAATACACTTTTGGTCCGAGGTTTGGGTTAAGTGACAGTTTGTCATTTTAGTCCCCTCCAATTTTCCCGTTAATTACTAACGTTTGATGTGGCACTATTTTTTTAATTAAAAATGTTTTTTTTTTAATTTTTTAAAACAAAATATATTAAAATAATATAAAATATTTTTATGTTTTTTTCTTTTTCATTTCTCTCTCCTCCCTCCTTCTTCTTCCTCTTATTCTTCTTCTTCTTACCGTCGGGCCATCACTTGTCGTCGCTGGAGTTGGCTGTCGCCGGAACCGCCGCCTCTTCTTCTCCTTCCCTTTTCCTCTGCTCTCCCCTTCTCCTGACGAACCTCGTATTTAAAAAAATAAAGGAAAATGTTTTAGATCTGAGTTCATGTCGTGGGTTTTCCAGATTTGAGTTCATGCCGCCATGTGTTCTCGCCGTCAACACTAGTCGTCGGAGAAGGAGAAGACCGAGAGAAGGAGACATTCGACGCGGGTTTTATGTCCAAATTTGTTCGTGTCATCGTGGGTTTTATTTTCAGATTTGTTCATGTCGTCGTCGATTTCCAGATCTGTGGTGGTGCCGCCGTTCAGAACAAAGCTTGTCGGTGCTGTCGTTCGAACGTGGGCTGTGTCGTCGGAGATGACATCGATTTTTCAGATTTGAGAATGGAGAAGGGGAAAGATAAGAATAAGGGAAGGAAAAGGGAAAATGAGAAAGAGAAAGGAAAGGAAAGAAGAGGACGGTTTGAGAATCACCGTTCTGAGCGGGGAGATTTCGCTTTTGGGGGAATTTTCTCTGGTCACGTAGGCCTCGATTTGAAGGTTCAGGAGAGTGGTCGTGGCGGAGGGCAGGAGGAGGTGGTGGAAGAAGGTCAGATCGGCGACGGTTTTGACGGTGAAGACGAGGAGGAGGTTGGGGAGCGGAACGGATTTGTTGGTGGTGCTGAGGTGAATCAGGGGACAAATGATGGAGATGAAAGGGGTGATGTCGGAGCCGTCGACGATGAAGATGATGGACCTCCCTCCCTCTCCTTGATATTCTGA

mRNA sequence

ATGCTTGTGGTAAGCGGCTTTGGATATGAGGAATTCCTAAAAAAAAAGGGAGCTATGCCAAGAGATCACTACTTTGATACGGTTGGTTCCATTGGTCATTCTGGAAGCTTCATTGATAGATGGATCAAAATTGACTCGAGCTCATCTTTGAAAGACCTCGAGCTTGTAGCTGTCTCCTGTTGGGCAGTTTGGAATGATAGGAAACAAACTGGTCTATGGTTGATTTGTAGCGTTTTCGTTGGGATGCTCCAAGTTGAAGGTGGAAACAAATTGTTTAATGGCCATCAAATTTATCAAAAAGTTCTCAAAGATTTGAGTTCATGCCGCCATGTGTTCTCGCCGTCAACACTAGTCGTCGGAGAAGGAGAAGACCGAGAGAAGGAGACATTCGACGCGGGTTTTATGTCCAAATTTGTTCGTGTCATCGTGGGTTTTATTTTCAGATTTGTTCATGTCGTCGTCGATTTCCAGATCTGTGGTGGTGCCGCCGTTCAGAACAAAGCTTGTCGGTGCTGTCGTTCGAACGTGGGCTGTGTCGTCGGAGATGACATCGATTTTTCAGATTTGAGAATGGAGAAGGGGAAAGATAAGAATAAGGGAAGGAAAAGGGAAAATGAGAAAGAGAAAGGAAAGGAAAGAAGAGGACGGTTTGAGAATCACCGTTCTGAGCGGGGAGATTTCGCTTTTGGGGGAATTTTCTCTGGTCACGTAGGCCTCGATTTGAAGGTTCAGGAGAGTGGTCGTGGCGGAGGGCAGGAGGAGGTGGTGGAAGAAGGTCAGATCGGCGACGGTTTTGACGGTGAAGACGAGGAGGAGGTTGGGGAGCGGAACGGATTTGTTGGTGGTGCTGAGGTGAATCAGGGGACAAATGATGGAGATGAAAGGGGTGATGTCGGAGCCGTCGACGATGAAGATGATGGACCTCCCTCCCTCTCCTTGATATTCTGA

Coding sequence (CDS)

ATGCTTGTGGTAAGCGGCTTTGGATATGAGGAATTCCTAAAAAAAAAGGGAGCTATGCCAAGAGATCACTACTTTGATACGGTTGGTTCCATTGGTCATTCTGGAAGCTTCATTGATAGATGGATCAAAATTGACTCGAGCTCATCTTTGAAAGACCTCGAGCTTGTAGCTGTCTCCTGTTGGGCAGTTTGGAATGATAGGAAACAAACTGGTCTATGGTTGATTTGTAGCGTTTTCGTTGGGATGCTCCAAGTTGAAGGTGGAAACAAATTGTTTAATGGCCATCAAATTTATCAAAAAGTTCTCAAAGATTTGAGTTCATGCCGCCATGTGTTCTCGCCGTCAACACTAGTCGTCGGAGAAGGAGAAGACCGAGAGAAGGAGACATTCGACGCGGGTTTTATGTCCAAATTTGTTCGTGTCATCGTGGGTTTTATTTTCAGATTTGTTCATGTCGTCGTCGATTTCCAGATCTGTGGTGGTGCCGCCGTTCAGAACAAAGCTTGTCGGTGCTGTCGTTCGAACGTGGGCTGTGTCGTCGGAGATGACATCGATTTTTCAGATTTGAGAATGGAGAAGGGGAAAGATAAGAATAAGGGAAGGAAAAGGGAAAATGAGAAAGAGAAAGGAAAGGAAAGAAGAGGACGGTTTGAGAATCACCGTTCTGAGCGGGGAGATTTCGCTTTTGGGGGAATTTTCTCTGGTCACGTAGGCCTCGATTTGAAGGTTCAGGAGAGTGGTCGTGGCGGAGGGCAGGAGGAGGTGGTGGAAGAAGGTCAGATCGGCGACGGTTTTGACGGTGAAGACGAGGAGGAGGTTGGGGAGCGGAACGGATTTGTTGGTGGTGCTGAGGTGAATCAGGGGACAAATGATGGAGATGAAAGGGGTGATGTCGGAGCCGTCGACGATGAAGATGATGGACCTCCCTCCCTCTCCTTGATATTCTGA

Protein sequence

MLVVSGFGYEEFLKKKGAMPRDHYFDTVGSIGHSGSFIDRWIKIDSSSSLKDLELVAVSCWAVWNDRKQTGLWLICSVFVGMLQVEGGNKLFNGHQIYQKVLKDLSSCRHVFSPSTLVVGEGEDREKETFDAGFMSKFVRVIVGFIFRFVHVVVDFQICGGAAVQNKACRCCRSNVGCVVGDDIDFSDLRMEKGKDKNKGRKRENEKEKGKERRGRFENHRSERGDFAFGGIFSGHVGLDLKVQESGRGGGQEEVVEEGQIGDGFDGEDEEEVGERNGFVGGAEVNQGTNDGDERGDVGAVDDEDDGPPSLSLIF
Homology
The following BLAST results are available for this feature:
BLAST of Lag0016354 vs.
Match NameE-valueIdentityDescription
BLAST of Lag0016354 vs.
Match NameE-valueIdentityDescription
BLAST of Lag0016354 vs.
Match NameE-valueIdentityDescription
BLAST of Lag0016354 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 244..315
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..220

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0016354.1Lag0016354.1mRNA