Lag0016344 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCACCCACTTTCTCCAATCAGAGAATACAGAGTAATTCCTCATCTTCTTCCTTCAGCCCTACCCCAACCCCAGTTTCTTCTTTCTTTCGTCGATGATTTCTTTTCACATTGGTTCTTGACAGGCACTCGGAGAACTTCCCTTCAAGTATCTGCAGTGTCGAAGAAATTGGAACCCGCCAAGGTCTGTAACTGTTCTCCCCTTTTGTGGGGGGTTTCTATTGAGTTTTGAATTGAAACATTGCAGATTCTGGCTTCGTTTTTCGATTGATTGTCTGTTTTGAGTTAATGGGGTTGGAGATTTTTGGTTATGATGGGCTTGTGTTTGTACTTGTGACTTGTAGGTTGTGCCACAAGGGGATAGAGTTCTCATTCGGCTCGAGGAGCTTCCTGAGGTGTGAATTTTTGACATCCATGATTGCCATGTTCTTCAATCATTTTGCTTTTGTGTTTTTATGTGATATCTTGTTCAAGTTCTTAACTGGCTGAGTTGAAATTGGATTTTTTGACATCCATGAATGCCATGTTCTTCACTCATTTTGCTTTTGTGTTTTTATGTGATATCCTGTTCAAGTTCTTAACTGGCTGAATTGAAATTGGATTTTTTATTTTCCACCATATCCTTCATATCATAACTTAAACAACCATGGTAGTGGCATTGAAACTTGTTGAAAAAGAAAAAAAAGGAAAGAGACTTTGGGGAATGAGTTTAAATCTTATGACCACTTAGGACACAGTGTAACTTTGAGTTTTAAGTCCTTTTATCTTGAACTTGAACAGTTATTTGTATCATAACTTAACTTTGATCTTACTTTTTGTTGGCATTTCATATTGATACGGAACTAAAACTCTAGTTAGTTCAATCTGTCAACGACATTGTATGATATTCAATTTGAATCTTTATTGATCGAGTGAATTGACCTTGAGCACAAGTTATGGAGTCTACTTTTCTGATGACTAATGAGAAAGTTCCTTCTCAAATTTCAATACGGAGTTCGTTAAAGAGTTTATTCTACTTGATAAATGAATTTCTTGGGTGTGGTCCTGCTGCTCTATCCACTGCAGCAAAAATCTTCTATGATACTGTTATATATAAGTGCATGTTTGAGATTAATTTTGAAATAGTTAAAATCACTTTTATGATGTTCGAAGTCACCTTGAAACATACTTTTAATCATTCAAAATTAGTTTCATGTTTGATTTTACACTTTTAAACGTGATTTTCATATCATCAAAATTGATTTTGAATTATTAAAGGTATGTTTCGGAGTGATTTTGAATATGACAAAAGTGATTTTAACCCAAACATGCCCTAAGTTCGCATTCATGCTTAAGTAAGTTGTACCATGTTGAGGCTATGAGAAATGGTGCTTTACTAAAGCCAAGGCATTGCTTCTTTGGGGATAGAAATTTGGAAACAAGATCAATCTGCCAATGTCAAATATGTTCTGGAGACTTTAGGACTTCGTGAATTGATTTTAGCTGCCGAGATAATTGTGTAGCATGCTTTCGTATATACCGATTTAATTTCCACTTAAGAAAATAATATGTATGAGTGACAGTGCTGATCATGCTTCATCATCATACCATTGTAGCATGCAATCTGGAATTGATTCTTCAATCATTTTATGTCACAGAAATCAGCAGGAGGAGTTCTATTGCCCAAGTCAGCCGTTAAATTCGAGCGTTATCTTTTGGGAGAGGTAAACAAAACTCCTTCCTTTTTCAATTCTGCTATGATGGGAAACAAAATGGAGCTTCTTTCTTCTCTTCGTGTTTCTTTACTCTGCTGCTAGGGCTGACTTCGCATCTTTTTTCAGATCCTCTCTACAGGGGCTGATGCCGGGGAACTGGGGCAAGGAAAGAAGGTCAGGATTCAACCTTCTATTTAGCTTGTTGATTTTCTAATTACGTTGTGGAATGCTTCAAATATTTTGGCAATGGATCTGAACTTCTCTCGGAAAGAAAAGTTTTCTTGTACCTTTTTTTAAGAGGAGATTTTTTCTTGTGTTGCAGGTTCTTTTCTCAGACATAAGTGCTTATGAGGTAAGCCAAATTTATTCGAAGATTACTTGTCCATTTCAGCAGTTATTCGTCGGAATTTGCATAGTTCATGATTTCCCATTTCAAACGAGTAGTAGCGTTCTCAGTTTAATGAAAGTGCATGACCAAAACTGAAACTTAACTATAGAAATAAGAAATTGACACAAAGTAGGTGAAAAAAAACTTATAGAGACTACTGGATTCAGAACAAAGAAGCACACTCATATTAGGCTTGGCCCAAATACACGCCACCCGACCAGACCAACCTTTAAAACACAGCTGAAGAGAATCAATCAAACTCCCCTTCAGGGTAAACCACCCTCAAACTCCCAATAAGAGAAGACCTCGAGCGATTTCGTGGTTTAGATAAGAGATTTCCTATAGATCTAGGGCTCAAACTCGAACACCTTACGTTAGGAGAAATAATTCATTGATATGGCTAGAACAATTTGATTTACACTTTTACACCATTGAACATATCAGAGAAACTCAAAAGAAAATGTAGTTTAACGCTTTAACCACGCATCAACGGTTCGACCGCATTTTGTTTTGCACAAAGATGTCGAATATGGCTGTTTTTCTGTATGTTAGGTGAAATATGAACTATTGATTTCAACACTTTCCATGTATTATTTCACAGGTGGATTTAGGCACAGATGCAAAGCATGTCTTCTGCAAAGCAAGTGATTTGCTGGCTGTAGTTGAGTAA ATGCACCCACTTTCTCCAATCAGAGAATACAGAGTAATTCCTCATCTTCTTCCTTCAGCCCTACCCCAACCCCAGTTTCTTCTTTCTTTCGTCGATGATTTCTTTTCACATTGGTTCTTGACAGGCACTCGGAGAACTTCCCTTCAAGTATCTGCAGTGTCGAAGAAATTGGAACCCGCCAAGGTTGTGCCACAAGGGGATAGAGTTCTCATTCGGCTCGAGGAGCTTCCTGAGAAATCAGCAGGAGGAGTTCTATTGCCCAAGTCAGCCGTTAAATTCGAGCGTTATCTTTTGGGAGAGATCCTCTCTACAGGGGCTGATGCCGGGGAACTGGGGCAAGGAAAGAAGGTTCTTTTCTCAGACATAAGTGCTTATGAGGTGGATTTAGGCACAGATGCAAAGCATGTCTTCTGCAAAGCAAGTGATTTGCTGGCTGTAGTTGAGTAA ATGCACCCACTTTCTCCAATCAGAGAATACAGAGTAATTCCTCATCTTCTTCCTTCAGCCCTACCCCAACCCCAGTTTCTTCTTTCTTTCGTCGATGATTTCTTTTCACATTGGTTCTTGACAGGCACTCGGAGAACTTCCCTTCAAGTATCTGCAGTGTCGAAGAAATTGGAACCCGCCAAGGTTGTGCCACAAGGGGATAGAGTTCTCATTCGGCTCGAGGAGCTTCCTGAGAAATCAGCAGGAGGAGTTCTATTGCCCAAGTCAGCCGTTAAATTCGAGCGTTATCTTTTGGGAGAGATCCTCTCTACAGGGGCTGATGCCGGGGAACTGGGGCAAGGAAAGAAGGTTCTTTTCTCAGACATAAGTGCTTATGAGGTGGATTTAGGCACAGATGCAAAGCATGTCTTCTGCAAAGCAAGTGATTTGCTGGCTGTAGTTGAGTAA MHPLSPIREYRVIPHLLPSALPQPQFLLSFVDDFFSHWFLTGTRRTSLQVSAVSKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGELGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE Homology
BLAST of Lag0016344 vs. NCBI nr
Match: XP_023513476.1 (10 kDa chaperonin 1, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 204.9 bits (520), Expect = 4.8e-49 Identity = 110/123 (89.43%), Postives = 111/123 (90.24%), Query Frame = 0
BLAST of Lag0016344 vs. NCBI nr
Match: XP_022958987.1 (10 kDa chaperonin 1, chloroplastic-like [Cucurbita moschata] >XP_022958988.1 10 kDa chaperonin 1, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 202.6 bits (514), Expect = 2.4e-48 Identity = 104/109 (95.41%), Postives = 106/109 (97.25%), Query Frame = 0
BLAST of Lag0016344 vs. NCBI nr
Match: XP_023006781.1 (10 kDa chaperonin 1, chloroplastic-like [Cucurbita maxima] >XP_023006782.1 10 kDa chaperonin 1, chloroplastic-like [Cucurbita maxima] >XP_023549322.1 10 kDa chaperonin 1, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 202.6 bits (514), Expect = 2.4e-48 Identity = 104/109 (95.41%), Postives = 106/109 (97.25%), Query Frame = 0
BLAST of Lag0016344 vs. NCBI nr
Match: XP_022964390.1 (10 kDa chaperonin 1, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 201.4 bits (511), Expect = 5.3e-48 Identity = 108/123 (87.80%), Postives = 110/123 (89.43%), Query Frame = 0
BLAST of Lag0016344 vs. NCBI nr
Match: XP_004145027.1 (10 kDa chaperonin 1, chloroplastic [Cucumis sativus] >XP_016902509.1 PREDICTED: 10 kDa chaperonin-like [Cucumis melo] >KAA0039955.1 chloroplast chaperonin [Cucumis melo var. makuwa] >TYK24548.1 chloroplast chaperonin [Cucumis melo var. makuwa]) HSP 1 Score: 201.4 bits (511), Expect = 5.3e-48 Identity = 106/123 (86.18%), Postives = 110/123 (89.43%), Query Frame = 0
BLAST of Lag0016344 vs. ExPASy Swiss-Prot
Match: Q9M1C2 (10 kDa chaperonin 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPN10-1 PE=2 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 1.8e-38 Identity = 80/110 (72.73%), Postives = 93/110 (84.55%), Query Frame = 0
BLAST of Lag0016344 vs. ExPASy Swiss-Prot
Match: O80504 (10 kDa chaperonin 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPN10-2 PE=2 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 8.7e-38 Identity = 77/110 (70.00%), Postives = 94/110 (85.45%), Query Frame = 0
BLAST of Lag0016344 vs. ExPASy Swiss-Prot
Match: A5GNB0 (10 kDa chaperonin OS=Synechococcus sp. (strain WH7803) OX=32051 GN=groS PE=3 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 5.0e-09 Identity = 41/107 (38.32%), Postives = 63/107 (58.88%), Query Frame = 0
BLAST of Lag0016344 vs. ExPASy Swiss-Prot
Match: Q0I7U2 (10 kDa chaperonin OS=Synechococcus sp. (strain CC9311) OX=64471 GN=groS PE=3 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 5.0e-09 Identity = 41/107 (38.32%), Postives = 63/107 (58.88%), Query Frame = 0
BLAST of Lag0016344 vs. ExPASy Swiss-Prot
Match: Q7TV92 (10 kDa chaperonin OS=Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) OX=167539 GN=groS PE=3 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 6.5e-09 Identity = 42/107 (39.25%), Postives = 62/107 (57.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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