Lag0016307 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0016307
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionTubulin-specific chaperone A
Locationchr12: 36086901 .. 36091151 (-)
RNA-Seq ExpressionLag0016307
SyntenyLag0016307
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGATATTCAGGTCTGAATCTCCTTTTGCACAAAGCCAACAAATCAACCTGGTTTTCCAAAATCTTTTCAAATGCATTTGTTTTTCCAAATTTCTTTTTTTAAAAATACAATAACTATCTAATTAACCCATACTCTTTACTTTCAAATAATTGGAACACTTTAAAATTTGTGTTTGGATGAGCTATAAAACAAACAATGATCAACAAATAAATAAAAATATATATAATGTAAATAAACTCAAATTGAGATGCAACATACAAATACAACAAAAGAGATAGTGTTGAACGGAACAAAATAGATAATTATTCAACTTTTTCAAGGTTGGAGTTAAGTAGAGTAAGAGTGAGCGATTGAAAAGATGGAAATGGCCCGGGAGAGATGTCGGAAGTAGTCGGATTGGACAAGAGATAGAGAGAGAAAGAGAAATTGACTAAAATAGATCAAATTTTTATATTTTGATAGTTTGAGTGTTTAATTTAAAATTTATCCTATAGTTTATGAGAGTTTAATTTTTATAAAGAAGTTTTGATTTTATAAACCAATTTATTTAACATGTATTTTTTTATTATTATTTAGCATAATTATTGTTACTCCATTTGCTATGATAAGTTACATATATATTATATTATATTAAAATTAGTTATATTAAAAAACAAAAAAATCATCCATAGAAGTAGAAAAAACAAAACTAATATAAGAATGTATATACAATCTTAATTAATTTTAAATTAATTTTACTTCATAATAACTTAGTCAAATTATTACACGTACATCGCACGATGCACGTGGTAAAAATCTAGTTCATATAAATTATGCAACATAGTCCTTTCCTCACACACATTCTTTCAAGTATTCAGCAATCATACAATTTACATTAACATACATAATATTTTGCTTCTCATATATTATTTTTCATTCATAACTATAACACATTTTCAACACACATTTCCCAACCTAAAAGCAAATTCCAAAGATTAATAATTTGAACATTGAACTCGAAAATTAGTTTGAAGGCCAAAATTTACCCAATTGGTCCTTCACCTAACTCGTGCCCTTAGATCTTGATTTATTCACATCACTTCGAACGCCCGATTCCTTAGATCTTAAGAGATTAAGACCCTGTTTAATAACTATTTGGTTTTTTAAAATCATATTTGTTTTCTCCTCATTTCCTTACAATGATTTTCATCTTTGTTAAGAACACACTTGAATCCCTAGTCGAATTCTAAAAAAAAAAAACAAGTTTTTGAAAATTACTTTTTTAAGTTTTCAAAATTTGAATCGGATTTTTAAAACTAGGAAAAATATAGATAACAAACACAAGGAAACTTGTAGATAAAAACAATGTTTATATGCTTAATTTTAAAAAATCAAAAGCAAAAAATAAAATGGTTAGGCCATGTTTGATAACCATTTTGTTTTTTTATTTAGTTTTTGAAAATTAAGCCTATAAACCTACTCCCCTCCATAAGTTTCTTTATTTTGTTACCAAACTTTTTTATTTTTATTTTTATATTTTCAAAAACCAACTCAAGTTTTGAAAACTTAAAAAAAATAGTTTTCAAAAACTTGTTTTTGGTTTTGGAATTTTACTAAGAATTCAAATGTGTTCTTAACAAAGATGAAAATCATAGCAAAAAAATTAGAAAAAAATAAGAACAAAATTGTTATGGAACAAAACCTTAGTAAATGAGACTTAAATTGTTATTTTATGAATGATGTTTTTTAACCCAAAAAATCCCCTTTTTTGTTTTTTGAAAAATTCACTCTTTCATTTCTGTTTTCCTCTTCTTCTTCTCCATAGATCTCTTCGTCGCAGTCTACATCCATCGCCATTGTTCCACAACAGCTCACGCTCTGTCAATTTTCAGAAGAAGAAATTAGGGTTTCTTCGACGCCCAAGTTCTTCACGAACAGGTACGTTTTCCCTTTTCTTCTTCTTCGAATGCACCAGATTCATTTCCAATCAAAACCCTATCAGTATATTGATGTGTTCTTGTGGTTATGCTGATGCTAGGCCTTAATCGTTTCTGCAAATGAAATGGGACTTTGATTGTAATGTATACATCTCTGCTTGGAAGTTCTTCTTAGACCGCAAACTTGTTTAATGTTATGAATATGTTATCTTAGGCTATGTTTGGGAAAATCAATTTCCTCTAAAATGAACATGTTTGGCAAAGAGATTCGACGGCTAGGGCTTTGTGAGAGAGTTGATGAATTAGAAACGGAATATGGTATCTTAGGAAATTTACGAGTGTTGGCGGGGGTGCGTCGGTGACAGAGTTGGAGAACATCGCCGGCTAGGGCATTGTGAGAGAAATTACAATGTTTAAATGTGAGGATAGTTTTTTAATCTCAGCGTTCTGTAGGTTTAAATTAGAAGGTTTAATTTTGTTTTGGACTGATTTCAAAGTGATTCATCAAATACATCTTAGTCATTTTGATTTCTTTTGGTTCGTTTCTCTCCTTTCTGTATCGTCCTCCTTCCTTTTCGATCGTATTCTGTTAAGCCACTGTTCTGAAGTCAGATCAGGAGTGCAAGACCCATTCGTGATTCGAGCACAAACAAGCAAAGACCAGGCAGCAGTAAAATCTCTTCAATCCAGTCCTTTACAATTTATTAGGTTGATTTAGTTTAGAGTTTGGCTTAATTACTTTCTGAAATCCTTATTTTTTATTATTTTAGGATGTGTAAAAGGGGTCAGTAAGAATTGTAGCAAGTCTTTTGGCTTATGTTTTTCGCTGATTTCTGACCCCTTGTAATTTTGGGGCTAAATTGCTTCAATTCAGTGAATTATGTTCAGAAGGTACTTGTCCTAATAGGATGTATGTTTGTGGTTTCTAAATCCATGATAAATGCTTCTTGTGATAGGTAAGTATGGCTACTGTAAAGAACCTCAAGATTAAGACAGCAACCTGCAAACGCATTATCAAGGAGTTGCATTCTTATGAGAAGGAGGTAGAGAGAGAAGCTGCCAAAACAGCTGACATGAAAGAAAAAGGAGCTGACCCTTATGACCTTAAGCAACAGGTACATAAATGTTTTGTATTCTTCATAATCAGAACTTTGAATGATTGTGGTCTGCTGACTGCTCGTTGTCTGCTTGACTGCTCATGGTTTTGTTTGTGCCATCTTTGAATATCTAAAACAGGATTTCTTAGACATTCACAACCTTGTGATAGACTGAAAATATGAACATTAGAATCTGTGAGCGTGAAGATAAGTGATCTAGAATATGAAGACGAAGAATGCTTTTGAATTTGGAGTCTAGAGATGGTCATCAGGGTAGAAATTTTGAAATTATCCGTAGCCTTTAACTTTTTCACTGCGGTCAAACTTTATTTTCAGAAAGCAAAACAACGAACTAAAATGTTACTCCTCCGTTCAGAATGACCATAGAGCAACTCTTGTATATTAAGATTCTAGATTTTGGTACGGCTGATAAATGCACACCACAAATATTCAACATTGATTCAAAGGAGATGATCGAGCAGTTTCTTCCCCATCCTCCTTTTTGGGAACAGAGAAATTTTTTGTGGCATATTGGGATTTGTGCTATTGTTTGGGGATTGTAGGGTAAGAGGAACAAATAGGACCTTTTGAGGGATGGATGGGAATCCTCATGATGTTTGGTCCCTTGCTAGATATTATGTTTCTCTTTGGATGTAAGTGACACGTCTTTTTGGGGACTTGGTTTTTTTTGTTTGCCCTTGTATTCTTTCATTTTTTTTTCTCAATGAAAGTGTGGTTCTTCATAGAAAAAAATGTATATATTCAACATTGATTCATTTGAGTTTCATGTTTACTCTTTTAGCTTCTGGGTAAATGGAGATTGAATGTAATGCCATCATCACATGAATCTTCTTCTTCAATTAATCTTTGTATTATTACAATTTTACAGTTAGCATTCTCTTTGTAAGTAGGAAAATGTGCTGGCTGAATCAAGGATGATGGTTCCCGATTGTCACAAGCGTCTGGAGGCTGCCTTAGCTGATCTGAAAGGAGCATTGGTATTATCATTAGCTTTTCTTTTCATTCTTCCCTTTTTCGCTCTTCTGAAGAGCTCGATTCTTGAAGGTTTTCTGCACGTGCCCCGTTTTCATAAGTCAACTAAAACAAACCTTTTCACCTCCTCCATCTCCAGGCTGAACTGGAAAATTCAACACAAGAGAAAGGCCCAGAATTCGATGATGCTCGGAGCACAATCGCCGAGATCGAAAGTTTCCTTAAGACGACAGAGGAATAG

mRNA sequence

ATGCCGATATTCAGGTCTGAATCTCCTTTTGCACAAAGCCAACAAATCAACCTGATCTCTTCGTCGCAGTCTACATCCATCGCCATTGTTCCACAACAGCTCACGCTCTGTCAATTTTCAGAAGAAGAAATTAGGGTTTCTTCGACGCCCAAGTTCTTCACGAACAGATCAGGAGTGCAAGACCCATTCGTGATTCGAGCACAAACAAGCAAAGACCAGGCAGCAGTAAGTATGGCTACTGTAAAGAACCTCAAGATTAAGACAGCAACCTGCAAACGCATTATCAAGGAGTTGCATTCTTATGAGAAGGAGGTAGAGAGAGAAGCTGCCAAAACAGCTGACATGAAAGAAAAAGGAGCTGACCCTTATGACCTTAAGCAACAGGAAAATGTGCTGGCTGAATCAAGGATGATGGTTCCCGATTGTCACAAGCGTCTGGAGGCTGCCTTAGCTGATCTGAAAGGAGCATTGGCTGAACTGGAAAATTCAACACAAGAGAAAGGCCCAGAATTCGATGATGCTCGGAGCACAATCGCCGAGATCGAAAGTTTCCTTAAGACGACAGAGGAATAG

Coding sequence (CDS)

ATGCCGATATTCAGGTCTGAATCTCCTTTTGCACAAAGCCAACAAATCAACCTGATCTCTTCGTCGCAGTCTACATCCATCGCCATTGTTCCACAACAGCTCACGCTCTGTCAATTTTCAGAAGAAGAAATTAGGGTTTCTTCGACGCCCAAGTTCTTCACGAACAGATCAGGAGTGCAAGACCCATTCGTGATTCGAGCACAAACAAGCAAAGACCAGGCAGCAGTAAGTATGGCTACTGTAAAGAACCTCAAGATTAAGACAGCAACCTGCAAACGCATTATCAAGGAGTTGCATTCTTATGAGAAGGAGGTAGAGAGAGAAGCTGCCAAAACAGCTGACATGAAAGAAAAAGGAGCTGACCCTTATGACCTTAAGCAACAGGAAAATGTGCTGGCTGAATCAAGGATGATGGTTCCCGATTGTCACAAGCGTCTGGAGGCTGCCTTAGCTGATCTGAAAGGAGCATTGGCTGAACTGGAAAATTCAACACAAGAGAAAGGCCCAGAATTCGATGATGCTCGGAGCACAATCGCCGAGATCGAAAGTTTCCTTAAGACGACAGAGGAATAG

Protein sequence

MPIFRSESPFAQSQQINLISSSQSTSIAIVPQQLTLCQFSEEEIRVSSTPKFFTNRSGVQDPFVIRAQTSKDQAAVSMATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEAALADLKGALAELENSTQEKGPEFDDARSTIAEIESFLKTTEE
Homology
[Close]
BLAST of Lag0016307 vs. NCBI nr
Match: XP_022155762.1 (tubulin-folding cofactor A [Momordica charantia])

HSP 1 Score: 205.3 bits (521), Expect = 4.7e-49
Identity = 105/113 (92.92%), Postives = 112/113 (99.12%), Query Frame = 0 

Query: 78  MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 137
           MATV+NLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 138 MVPDCHKRLEAALADLKGALAELENSTQEKGPEFDDARSTIAEIESFLKTTEE 191
           M+PDCHKRLEA+LADLKGALAELE STQEKGPEFD+ARSTI+E+E+FLKTTEE
Sbjct: 61  MIPDCHKRLEASLADLKGALAELEESTQEKGPEFDNARSTISEVENFLKTTEE 113

[Close]
BLAST of Lag0016307 vs. NCBI nr
Match: XP_038907024.1 (tubulin-folding cofactor A [Benincasa hispida])

HSP 1 Score: 201.8 bits (512), Expect = 5.2e-48
Identity = 106/113 (93.81%), Postives = 109/113 (96.46%), Query Frame = 0 

Query: 78  MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 137
           MATVKNLKIKTATCKRIIKELHSYEKEVE EAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRIIKELHSYEKEVEIEAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 138 MVPDCHKRLEAALADLKGALAELENSTQEKGPEFDDARSTIAEIESFLKTTEE 191
           MVPDCHKRLE+AL DLKGALAELE STQEKGPEF+DARSTI EIESFL+TTEE
Sbjct: 61  MVPDCHKRLESALVDLKGALAELEKSTQEKGPEFNDARSTITEIESFLQTTEE 113

[Close]
BLAST of Lag0016307 vs. NCBI nr
Match: XP_023006149.1 (tubulin-folding cofactor A [Cucurbita maxima] >XP_023006150.1 tubulin-folding cofactor A [Cucurbita maxima] >XP_023006151.1 tubulin-folding cofactor A [Cucurbita maxima] >XP_023006152.1 tubulin-folding cofactor A [Cucurbita maxima])

HSP 1 Score: 201.1 bits (510), Expect = 8.8e-48
Identity = 106/113 (93.81%), Postives = 107/113 (94.69%), Query Frame = 0 

Query: 78  MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 137
           MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 138 MVPDCHKRLEAALADLKGALAELENSTQEKGPEFDDARSTIAEIESFLKTTEE 191
           MVPDCHKRLE+ALADLKG L ELE STQ KGPEFDDARS I EIESFLKTTEE
Sbjct: 61  MVPDCHKRLESALADLKGTLDELEKSTQVKGPEFDDARSIITEIESFLKTTEE 113

[Close]
BLAST of Lag0016307 vs. NCBI nr
Match: XP_022959143.1 (tubulin-folding cofactor A [Cucurbita moschata] >XP_022959144.1 tubulin-folding cofactor A [Cucurbita moschata] >XP_022959145.1 tubulin-folding cofactor A [Cucurbita moschata] >XP_022959146.1 tubulin-folding cofactor A [Cucurbita moschata])

HSP 1 Score: 200.7 bits (509), Expect = 1.2e-47
Identity = 106/113 (93.81%), Postives = 107/113 (94.69%), Query Frame = 0 

Query: 78  MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 137
           MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 138 MVPDCHKRLEAALADLKGALAELENSTQEKGPEFDDARSTIAEIESFLKTTEE 191
           MVPDCHKRLEAALADLKG L ELE STQ KGPEF+DARS I EIESFLKTTEE
Sbjct: 61  MVPDCHKRLEAALADLKGTLDELEKSTQVKGPEFEDARSIITEIESFLKTTEE 113

[Close]
BLAST of Lag0016307 vs. NCBI nr
Match: XP_023548059.1 (tubulin-folding cofactor A [Cucurbita pepo subsp. pepo] >XP_023548060.1 tubulin-folding cofactor A [Cucurbita pepo subsp. pepo] >XP_023548061.1 tubulin-folding cofactor A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.9 bits (507), Expect = 2.0e-47
Identity = 105/113 (92.92%), Postives = 107/113 (94.69%), Query Frame = 0 

Query: 78  MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 137
           MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 138 MVPDCHKRLEAALADLKGALAELENSTQEKGPEFDDARSTIAEIESFLKTTEE 191
           MVPDCHKRLE+ALADLKG L ELE STQ +GPEFDDARS I EIESFLKTTEE
Sbjct: 61  MVPDCHKRLESALADLKGTLDELEKSTQVRGPEFDDARSIITEIESFLKTTEE 113

[Close]
BLAST of Lag0016307 vs. ExPASy Swiss-Prot
Match: O04350 (Tubulin-folding cofactor A OS=Arabidopsis thaliana OX=3702 GN=TFCA PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 9.8e-42
Identity = 83/112 (74.11%), Postives = 100/112 (89.29%), Query Frame = 0 

Query: 78  MATVKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 137
           MAT++NLKIKT+TCKRI+KELHSYEKEVEREAAKTADMK+KGADPYDLKQQENVL ESRM
Sbjct: 1   MATIRNLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLGESRM 60

Query: 138 MVPDCHKRLEAALADLKGALAELENSTQEKGPEFDDARSTIAEIESFLKTTE 190
           M+PDCHKRLE+ALADLK  LAELE + +++GPE +DA+ T+A++E    T +
Sbjct: 61  MIPDCHKRLESALADLKSTLAELEETDEKEGPEIEDAKKTVADVEKQFPTED 112

[Close]
BLAST of Lag0016307 vs. ExPASy Swiss-Prot
Match: O75347 (Tubulin-specific chaperone A OS=Homo sapiens OX=9606 GN=TBCA PE=1 SV=3)

HSP 1 Score: 74.7 bits (182), Expect = 1.2e-12
Identity = 42/103 (40.78%), Postives = 64/103 (62.14%), Query Frame = 0 

Query: 81  VKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVP 140
           V+ +KIKT   KR++KE   YEKE +++  K   M+ +  + YD+K+Q  +L ESRMM+P
Sbjct: 6   VRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIP 65

Query: 141 DCHKRLEAALADLKGALAELENSTQ-EKGPEFDDARSTIAEIE 183
           DC +RLEAA  DL+     LEN    E+  E+ +AR  +  ++
Sbjct: 66  DCQRRLEAAYLDLQRI---LENEKDLEEAEEYKEARLVLDSVK 105

[Close]
BLAST of Lag0016307 vs. ExPASy Swiss-Prot
Match: P80585 (Tubulin-specific chaperone A OS=Gallus gallus OX=9031 GN=TBCA PE=1 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 1.6e-12
Identity = 43/103 (41.75%), Postives = 63/103 (61.17%), Query Frame = 0 

Query: 81  VKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVP 140
           ++ +KIKT   KR+ KE   YEKE +++  K   MK +  D Y +K+Q  +L ESRMM+P
Sbjct: 6   LRQIKIKTGVVKRLAKEKVMYEKEAKQQEEKIEKMKAEACDDYGIKKQAEILQESRMMIP 65

Query: 141 DCHKRLEAALADLKGALAELENSTQ-EKGPEFDDARSTIAEIE 183
           DC +RLE A ADL      LEN  + E+  E+ +ARS +  ++
Sbjct: 66  DCQRRLEIAHADLTQL---LENEKELEEAEEYKEARSILESVK 105

[Close]
BLAST of Lag0016307 vs. ExPASy Swiss-Prot
Match: Q6PEC1 (Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.8e-12
Identity = 42/102 (41.18%), Postives = 63/102 (61.76%), Query Frame = 0 

Query: 81  VKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVP 140
           V+ +KIKT   KR++KE   YEKE +++  K   MK +  + Y +K+Q  +L ESRMM+P
Sbjct: 6   VRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMKAEDGENYAIKKQAEILQESRMMIP 65

Query: 141 DCHKRLEAALADLKGALAELENSTQEKGPEFDDARSTIAEIE 183
           DC +RLEAA  DL+  L E E   +E   E+ +AR  +  ++
Sbjct: 66  DCQRRLEAAYTDLRQIL-ESEKDLEE-AEEYKEARIVLDSVK 105

[Close]
BLAST of Lag0016307 vs. ExPASy Swiss-Prot
Match: P48427 (Tubulin-specific chaperone A OS=Bos taurus OX=9913 GN=TBCA PE=1 SV=3)

HSP 1 Score: 72.0 bits (175), Expect = 8.1e-12
Identity = 42/102 (41.18%), Postives = 62/102 (60.78%), Query Frame = 0 

Query: 81  VKNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVP 140
           V+ +KIKT   KR++KE   YEKE +++  K   MK +  + Y +K+Q  +L ESRMM+P
Sbjct: 6   VRQIKIKTGVVKRLVKEKMMYEKEAKQQEEKIEKMKAEDGENYAIKKQAEILQESRMMIP 65

Query: 141 DCHKRLEAALADLKGALAELENSTQEKGPEFDDARSTIAEIE 183
           DC +RLEAA  DL   L E E   +E   E+ +AR  +  ++
Sbjct: 66  DCQRRLEAAHTDLL-QLLESEKDLEE-AEEYKEARLVLDSVK 105

The following BLAST results are available for this feature:
BLAST of Lag0016307 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022155762.14.7e-4992.92tubulin-folding cofactor A [Momordica charantia][more]
XP_038907024.15.2e-4893.81tubulin-folding cofactor A [Benincasa hispida][more]
XP_023006149.18.8e-4893.81tubulin-folding cofactor A [Cucurbita maxima] >XP_023006150.1 tubulin-folding co... [more]
XP_022959143.11.2e-4793.81tubulin-folding cofactor A [Cucurbita moschata] >XP_022959144.1 tubulin-folding ... [more]
XP_023548059.12.0e-4792.92tubulin-folding cofactor A [Cucurbita pepo subsp. pepo] >XP_023548060.1 tubulin-... [more]
BLAST of Lag0016307 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O043509.8e-4274.11Tubulin-folding cofactor A OS=Arabidopsis thaliana OX=3702 GN=TFCA PE=1 SV=2[more]
O753471.2e-1240.78Tubulin-specific chaperone A OS=Homo sapiens OX=9606 GN=TBCA PE=1 SV=3[more]
P805851.6e-1241.75Tubulin-specific chaperone A OS=Gallus gallus OX=9031 GN=TBCA PE=1 SV=2[more]
Q6PEC12.8e-1241.18Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1[more]
P484278.1e-1241.18Tubulin-specific chaperone A OS=Bos taurus OX=9913 GN=TBCA PE=1 SV=3[more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 91..118
NoneNo IPR availableCOILSCoilCoilcoord: 143..166
NoneNo IPR availableGENE3D1.20.58.90coord: 75..190
e-value: 4.3E-41
score: 141.6
NoneNo IPR availablePANTHERPTHR21500:SF4TUBULIN-SPECIFIC CHAPERONE Acoord: 78..190
IPR004226Tubulin binding cofactor APFAMPF02970TBCAcoord: 84..163
e-value: 2.2E-27
score: 95.2
IPR004226Tubulin binding cofactor APANTHERPTHR21500TUBULIN-SPECIFIC CHAPERONE Acoord: 78..190
IPR036126Tubulin binding cofactor A superfamilySUPERFAMILY46988Tubulin chaperone cofactor Acoord: 80..181

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0016307.1Lag0016307.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007023 post-chaperonin tubulin folding pathway
biological_process GO:0007021 tubulin complex assembly
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005874 microtubule
molecular_function GO:0048487 beta-tubulin binding