Lag0016096 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAAGTTGGAGATGACTAGGAGGAGGAGGAAGATTATGAAGGGCAATTGGGAGCTTCTGCCTCATATTCATGACCTAATTTTCTCCAAACTCTATATCTCCAATTTTCCTGTCTGCAGGCTTGTCTGTAAATCTTGGAATGGTCTAGTTTTAGATTACGCTTCTTTTTCTTCTAAATTACTCCTTTCAAACATTCTCCTTTTCTCTGATTTCATTCCTCCGAGATGTAGTCTTAGTCGTTGGAAGACCAAGATCCATTGTCTCGATATTGATAAGCTGAGTTTGACGACACTGATGGGTCAGAGATCATCTTTCTCAACTCCTGCAATGGCCTGCTCTTTATTTCCAAACATTTCTCCTGTGACTATTTCAAAGATGTCTCCTCTTCGAAAGATTCTCCATGTGAGTGTTTCTATGATGATGACATATTTAATCCAATGACTGGGGAATTCTTCAAACTTAATGGACCTGTATCAGAAGATGATAATTTCGTATTCGGATTTGGTTTCAACCCTAATACCAAGCAGTACAAATTGTTCAAAGCAAACTACCTAGAATCCAGTCTTACAATGGAGATTTTCACGATTGGTAGAGGTGGTGTTGGGAATTGGGTGTGCAACCAAAGTCCCACATTGGCTAGATAA ATGGAGAAGTTGGAGATGACTAGGAGGAGGAGGAAGATTATGAAGGGCAATTGGGAGCTTCTGCCTCATATTCATGACCTAATTTTCTCCAAACTCTATATCTCCAATTTTCCTGTCTGCAGGCTTGTCTGTAAATCTTGGAATGGTCTAGTTTTAGATTACGCTTCTTTTTCTTCTAAATTACTCCTTTCAAACATTCTCCTTTTCTCTGATTTCATTCCTCCGAGATGTAGTCTTAGTCGTTGGAAGACCAAGATCCATTGTCTCGATATTGATAAGCTGAGTTTGACGACACTGATGGATGTCTCCTCTTCGAAAGATTCTCCATGTGAGTGTTTCTATGATGATGACATATTTAATCCAATGACTGGGGAATTCTTCAAACTTAATGGACCTGTATCAGAAGATGATAATTTCGTATTCGGATTTGGTTTCAACCCTAATACCAAGCAGTACAAATTGTTCAAAGCAAACTACCTAGAATCCAGTCTTACAATGGAGATTTTCACGATTGGTAGAGGTGGTGTTGGGAATTGGGTGTGCAACCAAAGTCCCACATTGGCTAGATAA ATGGAGAAGTTGGAGATGACTAGGAGGAGGAGGAAGATTATGAAGGGCAATTGGGAGCTTCTGCCTCATATTCATGACCTAATTTTCTCCAAACTCTATATCTCCAATTTTCCTGTCTGCAGGCTTGTCTGTAAATCTTGGAATGGTCTAGTTTTAGATTACGCTTCTTTTTCTTCTAAATTACTCCTTTCAAACATTCTCCTTTTCTCTGATTTCATTCCTCCGAGATGTAGTCTTAGTCGTTGGAAGACCAAGATCCATTGTCTCGATATTGATAAGCTGAGTTTGACGACACTGATGGATGTCTCCTCTTCGAAAGATTCTCCATGTGAGTGTTTCTATGATGATGACATATTTAATCCAATGACTGGGGAATTCTTCAAACTTAATGGACCTGTATCAGAAGATGATAATTTCGTATTCGGATTTGGTTTCAACCCTAATACCAAGCAGTACAAATTGTTCAAAGCAAACTACCTAGAATCCAGTCTTACAATGGAGATTTTCACGATTGGTAGAGGTGGTGTTGGGAATTGGGTGTGCAACCAAAGTCCCACATTGGCTAGATAA MEKLEMTRRRRKIMKGNWELLPHIHDLIFSKLYISNFPVCRLVCKSWNGLVLDYASFSSKLLLSNILLFSDFIPPRCSLSRWKTKIHCLDIDKLSLTTLMDVSSSKDSPCECFYDDDIFNPMTGEFFKLNGPVSEDDNFVFGFGFNPNTKQYKLFKANYLESSLTMEIFTIGRGGVGNWVCNQSPTLAR Homology
BLAST of Lag0016096 vs. NCBI nr
Match: XP_038879760.1 (uncharacterized protein LOC120071509 [Benincasa hispida]) HSP 1 Score: 114.0 bits (284), Expect = 1.4e-21 Identity = 71/197 (36.04%), Postives = 101/197 (51.27%), Query Frame = 0
BLAST of Lag0016096 vs. NCBI nr
Match: XP_008459707.1 (PREDICTED: F-box protein At3g07870-like [Cucumis melo]) HSP 1 Score: 110.5 bits (275), Expect = 1.6e-20 Identity = 79/201 (39.30%), Postives = 103/201 (51.24%), Query Frame = 0
BLAST of Lag0016096 vs. NCBI nr
Match: KAE8653057.1 (hypothetical protein Csa_020016 [Cucumis sativus]) HSP 1 Score: 100.5 bits (249), Expect = 1.6e-17 Identity = 71/219 (32.42%), Postives = 103/219 (47.03%), Query Frame = 0
BLAST of Lag0016096 vs. NCBI nr
Match: XP_011648473.2 (F-box protein At3g07870 [Cucumis sativus]) HSP 1 Score: 100.5 bits (249), Expect = 1.6e-17 Identity = 71/219 (32.42%), Postives = 103/219 (47.03%), Query Frame = 0
BLAST of Lag0016096 vs. NCBI nr
Match: XP_011660339.1 (putative F-box protein At1g32420 [Cucumis sativus]) HSP 1 Score: 100.1 bits (248), Expect = 2.1e-17 Identity = 64/163 (39.26%), Postives = 87/163 (53.37%), Query Frame = 0
BLAST of Lag0016096 vs. ExPASy Swiss-Prot
Match: Q9SFC7 (F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 3.6e-04 Identity = 51/166 (30.72%), Postives = 71/166 (42.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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