Lag0016088 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0016088
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr12: 32975298 .. 32976612 (-)
RNA-Seq ExpressionLag0016088
SyntenyLag0016088
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGACAAAACTGATGTCAAATAAGAGAACAAATGTAGATGCATTTAGATCAGTATTGCGGTTAGTGTGGAAAATTCACTACCACACGAGGATTGAATCGACAGGCGATAATGTCTTCTTTACCCAATTCAATTCGAAAATGGAGAAGGCCAGGATTTTGAATAGTGGTCCGTGGACCTTTGATAGGGCCTTATTGGTAATGGTGTCCCCTAAGGAAAATGAGAGGGTAGGGGATATGCAGTTCCATTTTGTGGATTTTTGGATTCATATTATGAATGTCCCGGTGAATTGTATGACTGTGAAGATGGCGAAGGTTTTGGGTGAGGCGGTGGGAACGATCCTAGAAGTTGATAGTGATGGGGATGATAACTGGTCAGGCCCTATTCTAAGAGTGCAGGTGAGGATCGATGTGAGAATGCCATTACAGAGGGGGTGACGTTGAAAACGAAGGATGGCAAGGAGATATGGTGTCCTATCCAATATGAGCAGCTGTTGGATATGTGTTTTAATTGTGGGGTTATTGGCCATGCGTTTAGGGAATGCCAGGAGGCTCCCGCGGAGTGTAAGGAAGTCACAGGGAGGCTTCCGTATGGTGAGTGGCTGCGGGCTCCGTTTAAGGTTAGGGGGACGCCGGGAGGAGGGAGGAGTGATGGGAAGAGAGGGGAAGGGGATGGAGGCGATGAAGGGTTTGGGGGCAATGTTAGGCATGAGGTCTTTAGCGCTAGGGGTGAGGGGAATGATGAAGGGGTGTTGGGTCGGGGTGTGAATGAGGAGGGCAACCCAAAATCTGTGAATGGTTTGCTGGTGGAGAAGGGAGGAGGAAGTACTGAATCTCATAATGTGGCGGATGGAGGAGGGAGTGAGGGGGGTGAGAAAGTGCAAAATGAATCGGGGGAGGATAGGGCACTGGGTGAGAGGGAGCGGAAGGGGAAGGGTGTGTTGGTGGAAGGTGCTGAGGAGGAGAGGATGTTGGTGGATGATCTGATAGGGGGGTGATTCGGTCTGGTGGGGTGGAGGATGGCTGGGTTGGGGAGGAGGGTATTGGAAGGCCAATTGGGGGAGGGGCCCTTATTATCAAGGAGGGTGGTGGAGGAGGTAGGAAATGGTGGAGGAAGGAGAGAATGGATGAAGGGGATAAGGAAGTGGGAATGGAGTCGAGGCTTGGAAAAAGAGGCCTAGAGTTGGGATATGGGGAGGGCGCTCTCTCTGAGCAGGAAGGATTGGGTGGTAAGAGGATGAGGGGCACTGATGTTGTTCTGGACTCAGAGATGGTAGCGGCGAACCCTGGGGACCAGGGTCGCCGACAGTTATGA

mRNA sequence

ATGGTGACAAAACTGATGTCAAATAAGAGAACAAATGTAGATGCATTTAGATCAGTATTGCGGTTAGTGTGGAAAATTCACTACCACACGAGGATTGAATCGACAGGCGATAATGTCTTCTTTACCCAATTCAATTCGAAAATGGAGAAGGCCAGGATTTTGAATAGTGGTCCGTGGACCTTTGATAGGGCCTTATTGGTAATGGTGTCCCCTAAGGAAAATGAGAGGGTAGGGGATATGCAGTTCCATTTTGTGGATTTTTGGATTCATATTATGAATGTCCCGGTGAATTGTATGACTGTGAAGATGGCGAAGGTTTTGGGTGAGGCGGTGGGAACGATCCTAGAAGTTGATAGTGATGGGGATGATAACTGGTCAGGCCCTATTCTAAGAGTGCAGCTGTTGGATATGTGTTTTAATTGTGGGGTTATTGGCCATGCGTTTAGGGAATGCCAGGAGGCTCCCGCGGAGTGTAAGGAAGTCACAGGGAGGCTTCCGTATGGTGAGTGGCTGCGGGCTCCGTTTAAGGTTAGGGGGACGCCGGGAGGAGGGAGGAGTGATGGGAAGAGAGGGGAAGGGGATGGAGGCGATGAAGGGTTTGGGGGCAATGTTAGGCATGAGGTCTTTAGCGCTAGGGGTGAGGGGAATGATGAAGGGGTGTTGGGTCGGGGTGTGAATGAGGAGGGCAACCCAAAATCTGTGAATGGTTTGCTGGTGGAGAAGGGAGGAGGAAGTACTGAATCTCATAATGTGGCGGATGGAGGAGGGAGTGAGGGGGGTGAGAAAGTGCAAAATGAATCGGGGGAGGATAGGGCACTGGGTGAGAGGGAGCGGAAGGGGAAGGGTGTGTTGGTGGAAGGTGCTGAGGAGGAGAGGATGTTGGATGGCTGGGTTGGGGAGGAGGGTATTGGAAGGCCAATTGGGGGAGGGGCCCTTATTATCAAGGAGGGTGGTGGAGGAGGTAGGAAATGGTGGAGGAAGGAGAGAATGGATGAAGGGGATAAGGAAGTGGGAATGGAGTCGAGGCTTGGAAAAAGAGGCCTAGAGTTGGGATATGGGGAGGGCGCTCTCTCTGAGCAGGAAGGATTGGGTGGTAAGAGGATGAGGGGCACTGATGTTGTTCTGGACTCAGAGATGGTAGCGGCGAACCCTGGGGACCAGGGTCGCCGACAGTTATGA

Coding sequence (CDS)

ATGGTGACAAAACTGATGTCAAATAAGAGAACAAATGTAGATGCATTTAGATCAGTATTGCGGTTAGTGTGGAAAATTCACTACCACACGAGGATTGAATCGACAGGCGATAATGTCTTCTTTACCCAATTCAATTCGAAAATGGAGAAGGCCAGGATTTTGAATAGTGGTCCGTGGACCTTTGATAGGGCCTTATTGGTAATGGTGTCCCCTAAGGAAAATGAGAGGGTAGGGGATATGCAGTTCCATTTTGTGGATTTTTGGATTCATATTATGAATGTCCCGGTGAATTGTATGACTGTGAAGATGGCGAAGGTTTTGGGTGAGGCGGTGGGAACGATCCTAGAAGTTGATAGTGATGGGGATGATAACTGGTCAGGCCCTATTCTAAGAGTGCAGCTGTTGGATATGTGTTTTAATTGTGGGGTTATTGGCCATGCGTTTAGGGAATGCCAGGAGGCTCCCGCGGAGTGTAAGGAAGTCACAGGGAGGCTTCCGTATGGTGAGTGGCTGCGGGCTCCGTTTAAGGTTAGGGGGACGCCGGGAGGAGGGAGGAGTGATGGGAAGAGAGGGGAAGGGGATGGAGGCGATGAAGGGTTTGGGGGCAATGTTAGGCATGAGGTCTTTAGCGCTAGGGGTGAGGGGAATGATGAAGGGGTGTTGGGTCGGGGTGTGAATGAGGAGGGCAACCCAAAATCTGTGAATGGTTTGCTGGTGGAGAAGGGAGGAGGAAGTACTGAATCTCATAATGTGGCGGATGGAGGAGGGAGTGAGGGGGGTGAGAAAGTGCAAAATGAATCGGGGGAGGATAGGGCACTGGGTGAGAGGGAGCGGAAGGGGAAGGGTGTGTTGGTGGAAGGTGCTGAGGAGGAGAGGATGTTGGATGGCTGGGTTGGGGAGGAGGGTATTGGAAGGCCAATTGGGGGAGGGGCCCTTATTATCAAGGAGGGTGGTGGAGGAGGTAGGAAATGGTGGAGGAAGGAGAGAATGGATGAAGGGGATAAGGAAGTGGGAATGGAGTCGAGGCTTGGAAAAAGAGGCCTAGAGTTGGGATATGGGGAGGGCGCTCTCTCTGAGCAGGAAGGATTGGGTGGTAAGAGGATGAGGGGCACTGATGTTGTTCTGGACTCAGAGATGGTAGCGGCGAACCCTGGGGACCAGGGTCGCCGACAGTTATGA

Protein sequence

MVTKLMSNKRTNVDAFRSVLRLVWKIHYHTRIESTGDNVFFTQFNSKMEKARILNSGPWTFDRALLVMVSPKENERVGDMQFHFVDFWIHIMNVPVNCMTVKMAKVLGEAVGTILEVDSDGDDNWSGPILRVQLLDMCFNCGVIGHAFRECQEAPAECKEVTGRLPYGEWLRAPFKVRGTPGGGRSDGKRGEGDGGDEGFGGNVRHEVFSARGEGNDEGVLGRGVNEEGNPKSVNGLLVEKGGGSTESHNVADGGGSEGGEKVQNESGEDRALGERERKGKGVLVEGAEEERMLDGWVGEEGIGRPIGGGALIIKEGGGGGRKWWRKERMDEGDKEVGMESRLGKRGLELGYGEGALSEQEGLGGKRMRGTDVVLDSEMVAANPGDQGRRQL
Homology
BLAST of Lag0016088 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 155.6 bits (392), Expect = 8.8e-34
Identity = 95/275 (34.55%), Postives = 138/275 (50.18%), Query Frame = 0

Query: 1   MVTKLMSNKRTNVDAFRSVLRLVWKIHYHTRIESTGDNVFFTQFNSKMEKARILNSGPWT 60
           +V KL ++KR + +A RSV++ VW++H  TR E  G N++   F S  EK+R+L+SGPWT
Sbjct: 39  VVAKLHTSKRISAEAIRSVMKSVWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWT 98

Query: 61  FDRALLVMVSPKENERVGDMQFHFVDFWIHIMNVPVNCMTVKMAKVLGEAVGTILEVDSD 120
           F+++LLV+ SP    +  DM F+F  FWI I N+P  C++ +MA +LG  +G + E++ D
Sbjct: 99  FNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGD 158

Query: 121 GDDNWSGPILRV-------------------------------QLLDMCFNCGVIGHAFR 180
           G D W+GP +RV                               +L D C+ CG IGH+ R
Sbjct: 159 GADGWAGPFIRVRVKIDVSKPLRRGIKLKNSDGKDIWCPLRYEKLPDFCYECGKIGHSGR 218

Query: 181 ECQEAPAECKEVTGRLP--YGEWLRAPFKVRGTPGGGRSDGKRGEGDGGDEGFGGNVRHE 240
           EC++     K VT   P  YG+WLRA    +           R    GG  G G    H+
Sbjct: 219 ECEQ---RSKVVTTNSPEQYGDWLRATLLKKSVSHPEEEVFWR----GGRFGRG----HQ 278

Query: 241 VFSARGEGNDEGVLGRGVNEEGNPKSVNGLLVEKG 243
           V   RG   D         +   P+S +   VE+G
Sbjct: 279 VNGGRGGRGDWRRRDENWRDIDGPESSHRRAVEEG 302

BLAST of Lag0016088 vs. NCBI nr
Match: XP_024955847.1 (uncharacterized protein LOC112498636 [Citrus sinensis])

HSP 1 Score: 134.4 bits (337), Expect = 2.1e-27
Identity = 66/204 (32.35%), Postives = 104/204 (50.98%), Query Frame = 0

Query: 1   MVTKLMSNKRTNVDAFRSVLRLVWKIHYHTRIESTGDNVFFTQFNSKMEKARILNSGPWT 60
           +V K+M  +  N++  RS +  +W+ +   RIES G N+F  +F  + +K R++  GPW 
Sbjct: 41  LVGKIMHQRGVNLEGLRSAMLQIWRTNKEVRIESLGSNIFMFKFAVEADKKRVMGGGPWH 100

Query: 61  FDRALLVMVSPKENERVGDMQFHFVDFWIHIMNVPVNCMTVKMAKVLGEAVGTILEVDSD 120
           FD AL+V+  PK    + +  F    FW+H+ N+P+  M   M + LGE +G++ E+D+D
Sbjct: 101 FDGALMVLTEPKGIGDIANQSFTHTLFWVHLRNMPITWMHRDMVQELGEYIGSVEEIDTD 160

Query: 121 GDDNWSG-------------------------------PILRVQLLDMCFNCGVIGHAFR 174
            + N  G                               PIL  +L D CF CG+IGH ++
Sbjct: 161 EEGNCIGKIARLRISVDITKPLRKFLEVETEDEGSIPIPILYERLPDFCFCCGLIGHQYK 220

BLAST of Lag0016088 vs. NCBI nr
Match: XP_022155933.1 (uncharacterized protein LOC111022932 [Momordica charantia])

HSP 1 Score: 134.0 bits (336), Expect = 2.7e-27
Identity = 59/133 (44.36%), Postives = 87/133 (65.41%), Query Frame = 0

Query: 2   VTKLMSNKRTNVDAFRSVLRLVWKIHYHTRIESTGDNVFFTQFNSKMEKARILNSGPWTF 61
           V KL ++KR +V+AFRSV++ +WK+H  T IE+ G N++   F S  EK R+L SGPW+F
Sbjct: 40  VGKLHTSKRISVEAFRSVMKSLWKVHESTHIETAGMNLYVIVFKSMAEKNRVLTSGPWSF 99

Query: 62  DRALLVMVSPKENERVGDMQFHFVDFWIHIMNVPVNCMTVKMAKVLGEAVGTILEVDSDG 121
           + +LLV+ SP   ++  DM F+F   WI I  +P  CM   MAK LG  +G + E+D +G
Sbjct: 100 ETSLLVLTSPTATDQPRDMNFNFFALWIQIHCIPFQCMIKDMAKFLGTRIGEVEEIDCNG 159

Query: 122 DDNWSGPILRVQL 135
              W+GP +RV++
Sbjct: 160 SYEWTGPFIRVRV 172

BLAST of Lag0016088 vs. NCBI nr
Match: XP_015380691.1 (uncharacterized protein LOC107174364 [Citrus sinensis])

HSP 1 Score: 133.3 bits (334), Expect = 4.7e-27
Identity = 65/204 (31.86%), Postives = 104/204 (50.98%), Query Frame = 0

Query: 1   MVTKLMSNKRTNVDAFRSVLRLVWKIHYHTRIESTGDNVFFTQFNSKMEKARILNSGPWT 60
           +V K++  +  N + F+S L+ VW+     +IES G+N F  +F  + +K R+L  GPW 
Sbjct: 19  LVGKVLLTRAVNKEGFKSALQQVWRTVKEVKIESLGNNCFMFKFTEEADKKRVLTGGPWH 78

Query: 61  FDRALLVMVSPKENERVGDMQFHFVDFWIHIMNVPVNCMTVKMAKVLGEAVGTILEVDSD 120
           FDRALLV+  PK    +    F    FWI I NVP+ CM  ++ + LG  +G + E+++D
Sbjct: 79  FDRALLVLTEPKGIGELTKQSFTHTAFWIQIRNVPIACMEKELIQELGGMIGAVEEIETD 138

Query: 121 -------------------------------GDDNWSGPILRVQLLDMCFNCGVIGHAFR 174
                                          G+ +   P++  +L D C+ CG+IGH ++
Sbjct: 139 ENGECLGEFARIRVLINITLPLKKILFLKQEGESDIQMPVVYERLPDFCYCCGIIGHQYK 198

BLAST of Lag0016088 vs. NCBI nr
Match: XP_015382410.1 (uncharacterized protein LOC107175497 [Citrus sinensis])

HSP 1 Score: 133.3 bits (334), Expect = 4.7e-27
Identity = 65/204 (31.86%), Postives = 104/204 (50.98%), Query Frame = 0

Query: 1   MVTKLMSNKRTNVDAFRSVLRLVWKIHYHTRIESTGDNVFFTQFNSKMEKARILNSGPWT 60
           +V K+M  +  N++  RS +  +W+ +   RIES G N+F  +F  + +K R++  GPW 
Sbjct: 41  LVGKIMHQRGVNLEGLRSAMLQIWRTNKEVRIESLGSNIFMFKFAVEADKKRVMGGGPWH 100

Query: 61  FDRALLVMVSPKENERVGDMQFHFVDFWIHIMNVPVNCMTVKMAKVLGEAVGTILEVDSD 120
           FD AL+V+  PK    + +  F    FW+H+ N+P+  M   M + LGE +G++ ++D+D
Sbjct: 101 FDGALMVLTEPKGIGDIANQSFTHTLFWVHLRNMPITWMHRDMVQELGEYIGSVEDIDTD 160

Query: 121 GDDNWSG-------------------------------PILRVQLLDMCFNCGVIGHAFR 174
            + N  G                               PIL  +L D CF CG+IGH ++
Sbjct: 161 KEGNCIGEIARLRISVDITKPLRKFLEVETEDECSIPIPILYERLPDFCFCCGLIGHQYK 220

BLAST of Lag0016088 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 4.2e-34
Identity = 95/275 (34.55%), Postives = 138/275 (50.18%), Query Frame = 0

Query: 1   MVTKLMSNKRTNVDAFRSVLRLVWKIHYHTRIESTGDNVFFTQFNSKMEKARILNSGPWT 60
           +V KL ++KR + +A RSV++ VW++H  TR E  G N++   F S  EK+R+L+SGPWT
Sbjct: 39  VVAKLHTSKRISAEAIRSVMKSVWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWT 98

Query: 61  FDRALLVMVSPKENERVGDMQFHFVDFWIHIMNVPVNCMTVKMAKVLGEAVGTILEVDSD 120
           F+++LLV+ SP    +  DM F+F  FWI I N+P  C++ +MA +LG  +G + E++ D
Sbjct: 99  FNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGD 158

Query: 121 GDDNWSGPILRV-------------------------------QLLDMCFNCGVIGHAFR 180
           G D W+GP +RV                               +L D C+ CG IGH+ R
Sbjct: 159 GADGWAGPFIRVRVKIDVSKPLRRGIKLKNSDGKDIWCPLRYEKLPDFCYECGKIGHSGR 218

Query: 181 ECQEAPAECKEVTGRLP--YGEWLRAPFKVRGTPGGGRSDGKRGEGDGGDEGFGGNVRHE 240
           EC++     K VT   P  YG+WLRA    +           R    GG  G G    H+
Sbjct: 219 ECEQ---RSKVVTTNSPEQYGDWLRATLLKKSVSHPEEEVFWR----GGRFGRG----HQ 278

Query: 241 VFSARGEGNDEGVLGRGVNEEGNPKSVNGLLVEKG 243
           V   RG   D         +   P+S +   VE+G
Sbjct: 279 VNGGRGGRGDWRRRDENWRDIDGPESSHRRAVEEG 302

BLAST of Lag0016088 vs. ExPASy TrEMBL
Match: A0A6J1DP89 (uncharacterized protein LOC111022932 OS=Momordica charantia OX=3673 GN=LOC111022932 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.3e-27
Identity = 59/133 (44.36%), Postives = 87/133 (65.41%), Query Frame = 0

Query: 2   VTKLMSNKRTNVDAFRSVLRLVWKIHYHTRIESTGDNVFFTQFNSKMEKARILNSGPWTF 61
           V KL ++KR +V+AFRSV++ +WK+H  T IE+ G N++   F S  EK R+L SGPW+F
Sbjct: 40  VGKLHTSKRISVEAFRSVMKSLWKVHESTHIETAGMNLYVIVFKSMAEKNRVLTSGPWSF 99

Query: 62  DRALLVMVSPKENERVGDMQFHFVDFWIHIMNVPVNCMTVKMAKVLGEAVGTILEVDSDG 121
           + +LLV+ SP   ++  DM F+F   WI I  +P  CM   MAK LG  +G + E+D +G
Sbjct: 100 ETSLLVLTSPTATDQPRDMNFNFFALWIQIHCIPFQCMIKDMAKFLGTRIGEVEEIDCNG 159

Query: 122 DDNWSGPILRVQL 135
              W+GP +RV++
Sbjct: 160 SYEWTGPFIRVRV 172

BLAST of Lag0016088 vs. ExPASy TrEMBL
Match: A0A5C7HUW5 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_015258 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 5.0e-27
Identity = 67/205 (32.68%), Postives = 104/205 (50.73%), Query Frame = 0

Query: 1   MVTKLMSNKRTNVDAFRSVLRLVWKIHYHTRIESTGDNVFFTQFNSKMEKARILNSGPWT 60
           +V K+++ KR N +AF+ V+  +W       IE+ GDN F   F S   ++ I + GPW 
Sbjct: 41  LVGKVLAGKRVNREAFKKVIEQLWSPIGSVEIEAVGDNTFMFFFPSLEVRSLIWSRGPWH 100

Query: 61  FDRALLVMVSPKENERVGDMQFHFVDFWIHIMNVPVNCMTVKMAKVLGEAVGTILEVDSD 120
           FDR L+V+  P     +  + FH V+FW+ I N+P+ CM  +MA+ L E +GT++E+ +D
Sbjct: 101 FDRNLIVLEKPTGTGDISKLSFHMVEFWVQIHNLPLMCMNRRMARYLAEQIGTVVELPTD 160

Query: 121 GDDNW------------SGPILRV-------------------QLLDMCFNCGVIGHAFR 174
             + W            S P+LR                    +L + C+ CG+IGH  R
Sbjct: 161 SRECWGRFIRVKVRIDISKPLLRCLRLNLDDSGEVTTAILLYERLPEFCYACGIIGHGLR 220

BLAST of Lag0016088 vs. ExPASy TrEMBL
Match: A0A5C7HKY9 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_015373 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.1e-26
Identity = 71/205 (34.63%), Postives = 98/205 (47.80%), Query Frame = 0

Query: 1   MVTKLMSNKRTNVDAFRSVLRLVWKIHYHTRIESTGDNVFFTQFNSKMEKARILNSGPWT 60
           +V K+++NK  N   FR V R +W       IE+  +NVF  QF    ++ RIL  GPWT
Sbjct: 41  LVGKVITNKLVNSSIFRDVFRKIWWTKGRVEIEAASNNVFTFQFEKAEDRCRILAGGPWT 100

Query: 61  FDRALLVMVSPKENERVGDMQFHFVDFWIHIMNVPVNCMTVKMAKVLGEAVGTILEVDSD 120
           FD AL+V+  P     V DM F + +FW+ I  VP+ CMT ++ + LG  VG + +VD  
Sbjct: 101 FDGALIVLEKPIGKGDVQDMSFSWAEFWVQIYQVPLLCMTKEIGQFLGSMVGVVKDVDVG 160

Query: 121 GDDNWSGPILRVQLL--------------------------------DMCFNCGVIGHAF 173
                SG  LRV+++                                + CF CG +GH  
Sbjct: 161 LTGECSGDFLRVRVVVDISKPLRRCIRVDVMGDEEETVMLLRSERLPNHCFRCGRLGHPA 220

BLAST of Lag0016088 vs. ExPASy TrEMBL
Match: A0A5C7I5K8 (DUF4283 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_010806 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 7.3e-26
Identity = 71/226 (31.42%), Postives = 115/226 (50.88%), Query Frame = 0

Query: 1   MVTKLMSNKRTNVDAFRSVLRLVWKIHYHTRIESTGDNVFFTQFNSKMEKARILNSGPWT 60
           +V K+++ KR N +AFR+V+  +W    +  IE  G+N+F   FN+  ++ RI   GPW 
Sbjct: 41  LVGKVLAGKRVNREAFRAVIEQLWCPFSNVEIEVVGENIFMFYFNNPEDRDRIWQRGPWH 100

Query: 61  FDRALLVMVSPKENERVGDMQFHFVDFWIHIMNVPVNCMTVKMAKVLGEAVGTILEVDSD 120
           FDR+L+V+V P+    +  + F+  +FW+ I ++P+ CM  +  K L E +GT++E+  +
Sbjct: 101 FDRSLIVLVKPEGTGDIAQLSFNKAEFWVQIHDIPLMCMNKRTVKWLAEQIGTVIEIPME 160

Query: 121 GDDNWSGPILRVQLLDMCFNCGVIGHAFRECQEAPAECKEVTG-RLPYGEWLRA------ 180
             + W G  +RV+       CG +GH   EC +  A+ + + G    YG WL+A      
Sbjct: 161 SRECW-GRFMRVKTSRFLLRCGRVGHGINECVDVEAKKEALEGTTTKYGSWLKAATVEKV 220

Query: 181 PFKVRGTPGGGRSDGKRGEGDGGDE-GFGGNVRHEVFSARGEGNDE 219
             K      GG S  KR   D  +    G  VR ++      G  E
Sbjct: 221 KLKSHSQGSGGSSVKKRSSDDLRETVNIGTFVREKLLPGNRNGGPE 265

BLAST of Lag0016088 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 59.7 bits (143), Expect = 6.1e-09
Identity = 32/111 (28.83%), Postives = 55/111 (49.55%), Query Frame = 0

Query: 44  FNSKMEKARILNSGPWTFDRALLVMVSPKENERVGDMQFHFVDFWIHIMNVPVNCMTVKM 103
           F S+     IL  GPW+F+  + V+   +  +   D +F  + FWI I  +P+  +T ++
Sbjct: 66  FQSEESMFSILRRGPWSFNDWMCVI--QRWTKLHSDAEFKRIPFWIQIRGIPLRFLTARI 125

Query: 104 AKVLGEAVGTILEVDSDGDDNWSGPILRVQ---LLDMCFNCGVIGHAFREC 152
              +GE +G  LE +   D +    +L+ Q   L + C  CG++ H   EC
Sbjct: 126 ITSIGERMGLFLETNLGRDVS----VLKFQYEKLKNFCTTCGMLSHDASEC 170

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022149484.18.8e-3434.55uncharacterized protein LOC111017902 [Momordica charantia][more]
XP_024955847.12.1e-2732.35uncharacterized protein LOC112498636 [Citrus sinensis][more]
XP_022155933.12.7e-2744.36uncharacterized protein LOC111022932 [Momordica charantia][more]
XP_015380691.14.7e-2731.86uncharacterized protein LOC107174364 [Citrus sinensis][more]
XP_015382410.14.7e-2731.86uncharacterized protein LOC107175497 [Citrus sinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1D7654.2e-3434.55uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A6J1DP891.3e-2744.36uncharacterized protein LOC111022932 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A5C7HUW55.0e-2732.68CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01525... [more]
A0A5C7HKY91.1e-2634.63CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01537... [more]
A0A5C7I5K87.3e-2631.42DUF4283 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_010806 ... [more]
Match NameE-valueIdentityDescription
AT3G42140.16.1e-0928.83zinc ion binding;nucleic acid binding [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 2..126
e-value: 1.4E-19
score: 70.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..284
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..284
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 320..342
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 318..342
NoneNo IPR availablePANTHERPTHR31286:SF26BNAC07G15150D PROTEINcoord: 43..278
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 43..278
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 138..153
score: 9.290097

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0016088.1Lag0016088.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding