Lag0016017 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0016017
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Nuclear transport factor 2 family protein
Location	chr12: 31586079 .. 31588502 (+)
RNA-Seq Expression	Lag0016017
Synteny	Lag0016017

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACCATCTTCTCGTTTCAATCATGCACATCCCTCCAAACCTCTCTCAACGCCATTCCACATAATCGCCCTCTCAAAATCTACAGAGCCCGGTGCCAGGGCCAGGGGAACAATCCCGCTACCGATTCGCCGAAGAATCAGGAATCCAAGCCCGAGAATGCGGTGCTCAAGGCCGCTTGGTATGGCTCCGAGCTTTTGGGAATCGCCGCTTCATTTCTCCGCCCGCCGTCGGATGCTGGAGCTCCCGTTAGGGCTCCGGAGGAGCTCGCGAGAGATGTCTCCGGTGCAATTCGTCGCCCTGTGATTGTGGAAACGATCAAGGAGGATTTTGAGCGCTCGTACTTTGTCACAGGTTTGGGAATTTTTGTTTGTTTTTGTCTCTGCAAGTTTGGAAGTATTAGTTCTTTATCCTTCTCCTGAAATGAAGAAAGTTTGTATGTTCGATTCAAGTTGTTTTTAGCCAATTCTTAATTAAGAGTTTGTTCGTATGGAGAAGTTTAAATTGGGAAATGGAAAGTTACTAGGGTAGAGTTGGAGTGATGCCAAACTTTCATTTGCTCTTAACAATGTTGAAATCTTTTTGTATGTTTAAACCACATCATATTCCCTAACTTTTAAAATAAATATTTAAATATTTATTATAGTCCCTGGACTGAAAGAAATAACCATATAGATCCATTCTAAACAAATTTAATGGATTGATGGGCATGGGGGTAAATAAGTTGATCAAGGTGGATATTGTGTAGATGGATATTAGGCTACAAAATAGTAACAAGAACCAAAATGGTTATTGGACTAAAAGATATTTTGAAAGTGTAAAGACCAACATGGTTGTTTTTAAAGTCCAGGGTCTAAGAAAGATATTTTGGAAGTTCAAGGATCAAAATGGAATAAATCTAAAAGTTCAGAGTCCAAAATGGGATTTAAAGCTTTTTAAATGTAAAGTGCAACCTGAAGACTATTTTTTTTTTCCTTTATAAAAATAATAATGATAATAAGGATTGCATAAAAAGACATGGAAACTTCTAGCACAATGATAAAAGATTTGGAAAAGATTGCATAAAGGGTCTTATAGCTTTACCGATCAAGTGAATTTGTTCACTTATACTTACTTTTGCTGTCTCATTGAAAAACTTGGAATTTTTATTTGCTTAAATTTGGTGATGAATGATGATAATCAGGGAACCTTACTCTTGATGCTTATGAAGAGCAGTGTGAATTTGCTGATCCTGCTGGTTCTTTCAAAGGGCTTCGCCGATTTAAAAGAAACTGCACAAACTTTGGATCCCTTGTGGATAAGTCAAACATGAAGCTTACCAAATGGGAGGATTTTGAGGTCAGCTCACTCTTGATTACTTTTTTTTTGTTCACTGAGCTTAGTGTTGAATTGTTAGTTGTTTTCTGAAGCAAAGGGTTTACTGGGCTGAGTACAGGACAAGGGCATTGGACATTGGAAGTTCAGTTGTATCTTGTCATTTCCGTGGAGACCAATTCTATCTGGTATGTTTTATCTATGATGCATAAGAGCAAGATTGAGATAATCTCTTAGGGTAGTGCTTTTTAGGAAAGTACTTTTGGAATGAGCACTAATCAAGTGTTTCCTATAACATATCTAGAGAGAGTTTGAAATGATAATGAACTGTACTTTAGTCTATTAAAAGCCATTTTCAAAATTTTCATGTTGTTTAGTTACATTGTCAAGGAAACACCCAATAGTGACTTATTCTAAAAGCACTTATACGGACAGTATTTCACTTAGAAGTAGCCTTCTCTACTTCTAACTTCTGAAGTGCAAGTTCTGTAAAACATTTTTAAAATTTTCAAATCACTTTTAAAGACTATTTTCATGGGCTAAAGCACTTTTCACCCTTCAAAAGTCACACTACACTCAACTCATCCAAATTTTATCCTTAGGTGCCATGAAAACTCGAGTTTGGGACACGTTTTTGTTAAATTTCGTTAGAGCTATTGGCAAGTTGATCAATTCAAATTAATTGGGTATTTCCACAGCATTACATTCTTTTAGCCCCATGATGCTTTGGCATCCCCCAAATAATTCACCTTCCCAGATGGTAAATAGTTTACAAACATTTTAAAAGCATTAAAATGCAGATGTACTTTCTTAATCTTAGTATGACCTCAATTCAAACATCTTGCATTCCTCATGAATCTGAGCAAAATATTGCAGCAACTGGATATACAGAGTATTATTTTGATGCAGGATCTGGAAAAGTATGCAGGTAACCTGTAAATCTCTTGTGTTTCTGAATTTTCTTTACTGAAATCTCCATTTCATTCCAACTCTTAATGGAAAATCTTAGGCATGTAGAGCACTGGAATGTTCCTAAAATGGCTTTACTGAAGCAAATTCTGAGACCCACTAGAGGTTGGTTGTGGTTTAAGAAGGCAGGTGGTGGTTGA

mRNA sequence

ATGGCGACCATCTTCTCGTTTCAATCATGCACATCCCTCCAAACCTCTCTCAACGCCATTCCACATAATCGCCCTCTCAAAATCTACAGAGCCCGGTGCCAGGGCCAGGGGAACAATCCCGCTACCGATTCGCCGAAGAATCAGGAATCCAAGCCCGAGAATGCGGTGCTCAAGGCCGCTTGGTATGGCTCCGAGCTTTTGGGAATCGCCGCTTCATTTCTCCGCCCGCCGTCGGATGCTGGAGCTCCCGTTAGGGCTCCGGAGGAGCTCGCGAGAGATGTCTCCGGTGCAATTCGTCGCCCTGTGATTGTGGAAACGATCAAGGAGGATTTTGAGCGCTCGTACTTTGTCACAGGGAACCTTACTCTTGATGCTTATGAAGAGCAGTGTGAATTTGCTGATCCTGCTGGTTCTTTCAAAGGGCTTCGCCGATTTAAAAGAAACTGCACAAACTTTGGATCCCTTGTGGATAAGTCAAACATGAAGCTTACCAAATGGGAGGATTTTGAGGACAAGGGCATTGGACATTGGAAGTTCAGTTGTATCTTGTCATTTCCGTGGAGACCAATTCTATCTGCAACTGGATATACAGAGTATTATTTTGATGCAGGATCTGGAAAAGTATGCAGGCATGTAGAGCACTGGAATGTTCCTAAAATGGCTTTACTGAAGCAAATTCTGAGACCCACTAGAGGTTGGTTGTGGTTTAAGAAGGCAGGTGGTGGTTGA

Coding sequence (CDS)

ATGGCGACCATCTTCTCGTTTCAATCATGCACATCCCTCCAAACCTCTCTCAACGCCATTCCACATAATCGCCCTCTCAAAATCTACAGAGCCCGGTGCCAGGGCCAGGGGAACAATCCCGCTACCGATTCGCCGAAGAATCAGGAATCCAAGCCCGAGAATGCGGTGCTCAAGGCCGCTTGGTATGGCTCCGAGCTTTTGGGAATCGCCGCTTCATTTCTCCGCCCGCCGTCGGATGCTGGAGCTCCCGTTAGGGCTCCGGAGGAGCTCGCGAGAGATGTCTCCGGTGCAATTCGTCGCCCTGTGATTGTGGAAACGATCAAGGAGGATTTTGAGCGCTCGTACTTTGTCACAGGGAACCTTACTCTTGATGCTTATGAAGAGCAGTGTGAATTTGCTGATCCTGCTGGTTCTTTCAAAGGGCTTCGCCGATTTAAAAGAAACTGCACAAACTTTGGATCCCTTGTGGATAAGTCAAACATGAAGCTTACCAAATGGGAGGATTTTGAGGACAAGGGCATTGGACATTGGAAGTTCAGTTGTATCTTGTCATTTCCGTGGAGACCAATTCTATCTGCAACTGGATATACAGAGTATTATTTTGATGCAGGATCTGGAAAAGTATGCAGGCATGTAGAGCACTGGAATGTTCCTAAAATGGCTTTACTGAAGCAAATTCTGAGACCCACTAGAGGTTGGTTGTGGTTTAAGAAGGCAGGTGGTGGTTGA

Protein sequence

MATIFSFQSCTSLQTSLNAIPHNRPLKIYRARCQGQGNNPATDSPKNQESKPENAVLKAAWYGSELLGIAASFLRPPSDAGAPVRAPEELARDVSGAIRRPVIVETIKEDFERSYFVTGNLTLDAYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILSATGYTEYYFDAGSGKVCRHVEHWNVPKMALLKQILRPTRGWLWFKKAGGG

Homology

[Close]

BLAST of Lag0016017 vs. NCBI nr
Match: XP_038906789.1 (uncharacterized protein LOC120092709 isoform X1 [Benincasa hispida])

HSP 1 Score: 441.0 bits (1133), Expect = 6.4e-120
Identity = 215/242 (88.84%), Postives = 223/242 (92.15%), Query Frame = 0


Query: 1   MATIFSFQSCTSLQTSLNAIPHNRPLKIYRARCQGQGNNPATDSPKNQESKPENAVLKAA 60
           MATIFS QS +SL+TSLN I  N PL+I R RC  QGNNPATDSPKNQESKPENAVLK A
Sbjct: 1   MATIFSIQSHSSLRTSLNPIRPNLPLRISRIRC--QGNNPATDSPKNQESKPENAVLKVA 60

Query: 61  WYGSELLGIAASFLRPPSDAGAPVRAPEELARDVSGAIRRPVIVETIKEDFERSYFVTGN 120
           WYGSELLGIAASFLRPPSD   P+RA +ELARDVSGAI RP+IVETIKEDF RSYFVTGN
Sbjct: 61  WYGSELLGIAASFLRPPSDVETPLRA-QELARDVSGAIHRPLIVETIKEDFGRSYFVTGN 120

Query: 121 LTLDAYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFS 180
           LTL+AYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHW+FS
Sbjct: 121 LTLEAYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWRFS 180

Query: 181 CILSFPWRPILSATGYTEYYFDAGSGKVCRHVEHWNVPKMALLKQILRPTRGWLWFKKAG 240
           CILSFPWRPILSATGYTEYYFDA SGKVCRHVEHWNVPKMALLKQILRPTR WLWFKKAG
Sbjct: 181 CILSFPWRPILSATGYTEYYFDARSGKVCRHVEHWNVPKMALLKQILRPTREWLWFKKAG 239

Query: 241 GG 243
           GG
Sbjct: 241 GG 239

[Close]

BLAST of Lag0016017 vs. NCBI nr
Match: XP_023547468.1 (uncharacterized protein LOC111806404 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 439.9 bits (1130), Expect = 1.4e-119
Identity = 215/240 (89.58%), Postives = 221/240 (92.08%), Query Frame = 0


Query: 1   MATIFSFQSCTSLQTSLNAIPHNRPLKIYRARCQGQGNNPATDSPKNQESKPENAVLKAA 60
           MATIF FQS TSLQTSLNAI  NRPLKI   RC  QG+NPATDSPKNQESKPENAVLK A
Sbjct: 1   MATIFPFQSRTSLQTSLNAIRPNRPLKICTIRC--QGDNPATDSPKNQESKPENAVLKVA 60

Query: 61  WYGSELLGIAASFLRPPSDAGAPVRAPEELARDVSGAIRRPVIVETIKEDFERSYFVTGN 120
           WYGSELLGIAASFLRPP+D   PVRA +ELARDVSGAIRRPVIVETIK+DFERSYFVTGN
Sbjct: 61  WYGSELLGIAASFLRPPTDVETPVRA-QELARDVSGAIRRPVIVETIKKDFERSYFVTGN 120

Query: 121 LTLDAYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFS 180
           LT++AYEEQCEFADPAGSFKGL RFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFS
Sbjct: 121 LTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFS 180

Query: 181 CILSFPWRPILSATGYTEYYFDAGSGKVCRHVEHWNVPKMALLKQILRPTRGWLWFKKAG 240
           CILSFPWRPILSATGYTEYYFDAGSGKV RHVEHWNVPKMALL QILRPTR WLWFKK G
Sbjct: 181 CILSFPWRPILSATGYTEYYFDAGSGKVSRHVEHWNVPKMALLNQILRPTRAWLWFKKPG 237

[Close]

BLAST of Lag0016017 vs. NCBI nr
Match: XP_022959200.1 (uncharacterized protein LOC111460260 [Cucurbita moschata])

HSP 1 Score: 437.2 bits (1123), Expect = 9.3e-119
Identity = 213/240 (88.75%), Postives = 221/240 (92.08%), Query Frame = 0


Query: 1   MATIFSFQSCTSLQTSLNAIPHNRPLKIYRARCQGQGNNPATDSPKNQESKPENAVLKAA 60
           MATIF FQS TSLQTSLNAI  NRPLKI + RCQG+  NPAT SPKN+ESKPENAVLK A
Sbjct: 1   MATIFPFQSRTSLQTSLNAIRPNRPLKICKIRCQGE--NPATGSPKNRESKPENAVLKVA 60

Query: 61  WYGSELLGIAASFLRPPSDAGAPVRAPEELARDVSGAIRRPVIVETIKEDFERSYFVTGN 120
           WYGSELLGIAASFLRPP+D   PVRA +ELARDVSGAIRRPVIVETIK+DFERSYFVTGN
Sbjct: 61  WYGSELLGIAASFLRPPTDVETPVRA-QELARDVSGAIRRPVIVETIKKDFERSYFVTGN 120

Query: 121 LTLDAYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFS 180
           LT++AYEEQCEFADPAGSFKGL RFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFS
Sbjct: 121 LTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFS 180

Query: 181 CILSFPWRPILSATGYTEYYFDAGSGKVCRHVEHWNVPKMALLKQILRPTRGWLWFKKAG 240
           CILSFPWRPILSATGYTEYYFDAGSGKV RHVEHWNVPKMALL QILRPTR WLWFKK G
Sbjct: 181 CILSFPWRPILSATGYTEYYFDAGSGKVSRHVEHWNVPKMALLNQILRPTRAWLWFKKPG 237

[Close]

BLAST of Lag0016017 vs. NCBI nr
Match: XP_023006651.1 (uncharacterized protein LOC111499312 [Cucurbita maxima])

HSP 1 Score: 432.6 bits (1111), Expect = 2.3e-117
Identity = 211/240 (87.92%), Postives = 219/240 (91.25%), Query Frame = 0


Query: 1   MATIFSFQSCTSLQTSLNAIPHNRPLKIYRARCQGQGNNPATDSPKNQESKPENAVLKAA 60
           MATIF FQS TSL+TSLNAI  NRPLKI   RC  QG+NPATDSPKN+ESKPENAVLK A
Sbjct: 1   MATIFPFQSRTSLRTSLNAIRPNRPLKICTIRC--QGDNPATDSPKNRESKPENAVLKVA 60

Query: 61  WYGSELLGIAASFLRPPSDAGAPVRAPEELARDVSGAIRRPVIVETIKEDFERSYFVTGN 120
           WYGSELLGIAASFLRPP+D   PVRA +EL RDVSGAIRRPVIVETIK+DFERSYFVTGN
Sbjct: 61  WYGSELLGIAASFLRPPTDVETPVRA-QELTRDVSGAIRRPVIVETIKKDFERSYFVTGN 120

Query: 121 LTLDAYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFS 180
           LT++AYEEQCEFADPAGSFKGL RFKRNCTNFGSLVDKSNMKLTKW DFEDKGIGHWKFS
Sbjct: 121 LTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWVDFEDKGIGHWKFS 180

Query: 181 CILSFPWRPILSATGYTEYYFDAGSGKVCRHVEHWNVPKMALLKQILRPTRGWLWFKKAG 240
           CILSFPWRPILSATGYTEYYFDAGSGKV RHVEHWNVPKMALL QILRPTR WLWFKK G
Sbjct: 181 CILSFPWRPILSATGYTEYYFDAGSGKVSRHVEHWNVPKMALLNQILRPTRAWLWFKKPG 237

[Close]

BLAST of Lag0016017 vs. NCBI nr
Match: KAG6575195.1 (hypothetical protein SDJN03_25834, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 430.3 bits (1105), Expect = 1.1e-116
Identity = 210/241 (87.14%), Postives = 217/241 (90.04%), Query Frame = 0


Query: 1   MATIFSFQSCTSLQTSLNAIPHNRPLKIYRARCQGQGNNPATDSPKNQESKPENAVLKAA 60
           MATIF FQS TSLQTSLN I  NRPLKI   RC  QG+NPATDSPK +ESKPENAVLK A
Sbjct: 1   MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRC--QGDNPATDSPKKRESKPENAVLKVA 60

Query: 61  WYGSELLGIAASFLRPPSDAGAPVRAPEELARDVSGAIRRPVIVETIKEDFERSYFVTGN 120
           WYGSELLGIAASFLRPP+D   PVRA +EL RDVSGAIRRPVIVETIK+DFERSYFVTGN
Sbjct: 61  WYGSELLGIAASFLRPPTDVETPVRA-QELTRDVSGAIRRPVIVETIKKDFERSYFVTGN 120

Query: 121 LTLDAYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFS 180
           LT++AYEEQCEFADPAGSFKGL RFKRNCTNFGSLVDK NMKLTKWEDFEDKGIGHWKFS
Sbjct: 121 LTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKLNMKLTKWEDFEDKGIGHWKFS 180

Query: 181 CILSFPWRPILSATGYTEYYFDAGSGKVCRHVEHWNVPKMALLKQILRPTRGWLWFKKAG 240
           CILSFPWRPILSATGYTEYYFDAGSGKV RHVEHWNVPKMALL QILRPTR WLWFKK  
Sbjct: 181 CILSFPWRPILSATGYTEYYFDAGSGKVSRHVEHWNVPKMALLNQILRPTRAWLWFKKPD 238

Query: 241 G 242
           G
Sbjct: 241 G 238

[Close]

BLAST of Lag0016017 vs. ExPASy TrEMBL
Match: A0A6J1H5M4 (uncharacterized protein LOC111460260 OS=Cucurbita moschata OX=3662 GN=LOC111460260 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 4.5e-119
Identity = 213/240 (88.75%), Postives = 221/240 (92.08%), Query Frame = 0


Query: 1   MATIFSFQSCTSLQTSLNAIPHNRPLKIYRARCQGQGNNPATDSPKNQESKPENAVLKAA 60
           MATIF FQS TSLQTSLNAI  NRPLKI + RCQG+  NPAT SPKN+ESKPENAVLK A
Sbjct: 1   MATIFPFQSRTSLQTSLNAIRPNRPLKICKIRCQGE--NPATGSPKNRESKPENAVLKVA 60

Query: 61  WYGSELLGIAASFLRPPSDAGAPVRAPEELARDVSGAIRRPVIVETIKEDFERSYFVTGN 120
           WYGSELLGIAASFLRPP+D   PVRA +ELARDVSGAIRRPVIVETIK+DFERSYFVTGN
Sbjct: 61  WYGSELLGIAASFLRPPTDVETPVRA-QELARDVSGAIRRPVIVETIKKDFERSYFVTGN 120

Query: 121 LTLDAYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFS 180
           LT++AYEEQCEFADPAGSFKGL RFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFS
Sbjct: 121 LTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFS 180

Query: 181 CILSFPWRPILSATGYTEYYFDAGSGKVCRHVEHWNVPKMALLKQILRPTRGWLWFKKAG 240
           CILSFPWRPILSATGYTEYYFDAGSGKV RHVEHWNVPKMALL QILRPTR WLWFKK G
Sbjct: 181 CILSFPWRPILSATGYTEYYFDAGSGKVSRHVEHWNVPKMALLNQILRPTRAWLWFKKPG 237

[Close]

BLAST of Lag0016017 vs. ExPASy TrEMBL
Match: A0A6J1KYC4 (uncharacterized protein LOC111499312 OS=Cucurbita maxima OX=3661 GN=LOC111499312 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 1.1e-117
Identity = 211/240 (87.92%), Postives = 219/240 (91.25%), Query Frame = 0


Query: 1   MATIFSFQSCTSLQTSLNAIPHNRPLKIYRARCQGQGNNPATDSPKNQESKPENAVLKAA 60
           MATIF FQS TSL+TSLNAI  NRPLKI   RC  QG+NPATDSPKN+ESKPENAVLK A
Sbjct: 1   MATIFPFQSRTSLRTSLNAIRPNRPLKICTIRC--QGDNPATDSPKNRESKPENAVLKVA 60

Query: 61  WYGSELLGIAASFLRPPSDAGAPVRAPEELARDVSGAIRRPVIVETIKEDFERSYFVTGN 120
           WYGSELLGIAASFLRPP+D   PVRA +EL RDVSGAIRRPVIVETIK+DFERSYFVTGN
Sbjct: 61  WYGSELLGIAASFLRPPTDVETPVRA-QELTRDVSGAIRRPVIVETIKKDFERSYFVTGN 120

Query: 121 LTLDAYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFS 180
           LT++AYEEQCEFADPAGSFKGL RFKRNCTNFGSLVDKSNMKLTKW DFEDKGIGHWKFS
Sbjct: 121 LTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWVDFEDKGIGHWKFS 180

Query: 181 CILSFPWRPILSATGYTEYYFDAGSGKVCRHVEHWNVPKMALLKQILRPTRGWLWFKKAG 240
           CILSFPWRPILSATGYTEYYFDAGSGKV RHVEHWNVPKMALL QILRPTR WLWFKK G
Sbjct: 181 CILSFPWRPILSATGYTEYYFDAGSGKVSRHVEHWNVPKMALLNQILRPTRAWLWFKKPG 237

[Close]

BLAST of Lag0016017 vs. ExPASy TrEMBL
Match: A0A5D3BY85 (Nuclear transport factor 2 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001340 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 6.7e-115
Identity = 207/241 (85.89%), Postives = 215/241 (89.21%), Query Frame = 0


Query: 1   MATIFSFQSCTSLQTSLNAIPHNRPLKIYRARCQGQGNNPATDSPKNQESKPENAVLKAA 60
           MATI SFQ  +SLQTSL +I  N  L+I R  C  +GNNP TDSP NQESKPENAVLK A
Sbjct: 1   MATIVSFQLHSSLQTSLYSIRPNPSLRICRIHC--RGNNPTTDSPNNQESKPENAVLKVA 60

Query: 61  WYGSELLGIAASFLRPPSDAGAPVRAPEELARDVSGAIRRPVIVETIKEDFERSYFVTGN 120
           WYGSELLGIAASFLRPPSD   PVRA +EL  DVSGAI RP+IVETIKEDF RSYFVTGN
Sbjct: 61  WYGSELLGIAASFLRPPSDVQTPVRA-QELTTDVSGAIPRPLIVETIKEDFRRSYFVTGN 120

Query: 121 LTLDAYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFS 180
           LTL+AYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFS
Sbjct: 121 LTLEAYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFS 180

Query: 181 CILSFPWRPILSATGYTEYYFDAGSGKVCRHVEHWNVPKMALLKQILRPTRGWLWFKKAG 240
           CILSFPWRPILSATGYT+YYFDA SGKVCRHVEHWNVPKMALLKQILRPTR WLWFKKAG
Sbjct: 181 CILSFPWRPILSATGYTDYYFDARSGKVCRHVEHWNVPKMALLKQILRPTRDWLWFKKAG 238

Query: 241 G 242
           G
Sbjct: 241 G 238

[Close]

BLAST of Lag0016017 vs. ExPASy TrEMBL
Match: A0A1S3C8H3 (uncharacterized protein LOC103497690 OS=Cucumis melo OX=3656 GN=LOC103497690 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 6.7e-115
Identity = 207/241 (85.89%), Postives = 215/241 (89.21%), Query Frame = 0


Query: 1   MATIFSFQSCTSLQTSLNAIPHNRPLKIYRARCQGQGNNPATDSPKNQESKPENAVLKAA 60
           MATI SFQ  +SLQTSL +I  N  L+I R  C  +GNNP TDSP NQESKPENAVLK A
Sbjct: 1   MATIVSFQLHSSLQTSLYSIRPNPSLRICRIHC--RGNNPTTDSPNNQESKPENAVLKVA 60

Query: 61  WYGSELLGIAASFLRPPSDAGAPVRAPEELARDVSGAIRRPVIVETIKEDFERSYFVTGN 120
           WYGSELLGIAASFLRPPSD   PVRA +EL  DVSGAI RP+IVETIKEDF RSYFVTGN
Sbjct: 61  WYGSELLGIAASFLRPPSDVQTPVRA-QELTTDVSGAIPRPLIVETIKEDFRRSYFVTGN 120

Query: 121 LTLDAYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFS 180
           LTL+AYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFS
Sbjct: 121 LTLEAYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFS 180

Query: 181 CILSFPWRPILSATGYTEYYFDAGSGKVCRHVEHWNVPKMALLKQILRPTRGWLWFKKAG 240
           CILSFPWRPILSATGYT+YYFDA SGKVCRHVEHWNVPKMALLKQILRPTR WLWFKKAG
Sbjct: 181 CILSFPWRPILSATGYTDYYFDARSGKVCRHVEHWNVPKMALLKQILRPTRDWLWFKKAG 238

Query: 241 G 242
           G
Sbjct: 241 G 238

[Close]

BLAST of Lag0016017 vs. ExPASy TrEMBL
Match: A0A6J1CZI8 (uncharacterized protein LOC111016220 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016220 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.3e-113
Identity = 206/244 (84.43%), Postives = 219/244 (89.75%), Query Frame = 0


Query: 1   MATIFSFQS--CTSLQTS-LNAIPHNRPLKIYRARCQGQGNNPATDSPKNQESKPENAVL 60
           MA I SFQS   T LQTS +N +  N PLKI R RC+G+  NPATDS KN+ES+PENA+L
Sbjct: 1   MAAICSFQSLTITPLQTSRINPLRPNSPLKICRIRCRGENPNPATDSAKNRESEPENALL 60

Query: 61  KAAWYGSELLGIAASFLRPPSDAGAPVRAPEELARDVSGAIRRPVIVETIKEDFERSYFV 120
           K AWYGSELLGIAASFLR PSDA APVRAP +LA DVSGAIRR +IVETIKEDF RSYFV
Sbjct: 61  KVAWYGSELLGIAASFLRSPSDAEAPVRAP-DLATDVSGAIRRGLIVETIKEDFGRSYFV 120

Query: 121 TGNLTLDAYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHW 180
           TGNLTLDAYEE+CEFADPAGSFKGLRRF+RNCTNFGSLV+ SNMKLTKWEDFEDKGIGHW
Sbjct: 121 TGNLTLDAYEEECEFADPAGSFKGLRRFQRNCTNFGSLVENSNMKLTKWEDFEDKGIGHW 180

Query: 181 KFSCILSFPWRPILSATGYTEYYFDAGSGKVCRHVEHWNVPKMALLKQILRPTRGWLWFK 240
           KFSC+LSFPWRPILSATGYTEYYFDAGSGKVCRHVEHWNVPKMALLKQILRPTR WLWFK
Sbjct: 181 KFSCVLSFPWRPILSATGYTEYYFDAGSGKVCRHVEHWNVPKMALLKQILRPTREWLWFK 240

Query: 241 KAGG 242
           KAGG
Sbjct: 241 KAGG 243

[Close]

BLAST of Lag0016017 vs. TAIR 10
Match: AT2G46100.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 298.9 bits (764), Expect = 3.7e-81
Identity = 138/210 (65.71%), Postives = 166/210 (79.05%), Query Frame = 0


Query: 23  NRPLKIYRARCQGQGNNPATDSPKNQESKPENAVLKAAWYGSELLGIAASFLRPPSDAGA 82
           NR  +     C+GQ  NP  +   ++  +P+N +LK AWYGSELLGIAAS  R P    +
Sbjct: 29  NRRFEATGVSCRGQ--NPTDEPQTSKGPEPDNVLLKIAWYGSELLGIAASVFRSPET--S 88

Query: 83  PVRAPEELARDVSGAIRRPVIVETIKEDFERSYFVTGNLTLDAYEEQCEFADPAGSFKGL 142
           P+    E+  D SG   R  +V++IK+DF+RSYFVTGNLT + YEE+CEFADPAGSFKGL
Sbjct: 89  PIVTGFEVPVDCSGRAVRVAVVDSIKQDFKRSYFVTGNLTPEVYEEKCEFADPAGSFKGL 148

Query: 143 RRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILSATGYTEYYFD 202
            RFKRNCTNFGSL++KSNMKL KWE+FEDKGIGHWKFSC++SFPW+PILSATGYTEYYFD
Sbjct: 149 ARFKRNCTNFGSLIEKSNMKLMKWENFEDKGIGHWKFSCVMSFPWKPILSATGYTEYYFD 208

Query: 203 AGSGKVCRHVEHWNVPKMALLKQILRPTRG 233
             SGK+CRHVEHWNVPK+AL KQ+LRP+RG
Sbjct: 209 TESGKICRHVEHWNVPKIALFKQLLRPSRG 234

[Close]

BLAST of Lag0016017 vs. TAIR 10
Match: AT2G46100.2 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 172.2 bits (435), Expect = 5.2e-43
Identity = 86/148 (58.11%), Postives = 107/148 (72.30%), Query Frame = 0


Query: 23  NRPLKIYRARCQGQGNNPATDSPKNQESKPENAVLKAAWYGSELLGIAASFLRPPSDAGA 82
           NR  +     C+GQ  NP  +   ++  +P+N +LK AWYGSELLGIAAS  R P    +
Sbjct: 29  NRRFEATGVSCRGQ--NPTDEPQTSKGPEPDNVLLKIAWYGSELLGIAASVFRSPET--S 88

Query: 83  PVRAPEELARDVSGAIRRPVIVETIKEDFERSYFVTGNLTLDAYEEQCEFADPAGSFKGL 142
           P+    E+  D SG   R  +V++IK+DF+RSYFVTGNLT + YEE+CEFADPAGSFKGL
Sbjct: 89  PIVTGFEVPVDCSGRAVRVAVVDSIKQDFKRSYFVTGNLTPEVYEEKCEFADPAGSFKGL 148

Query: 143 RRFKRNCTNFGSLVDKSNMKLTKWEDFE 171
            RFKRNCTNFGSL++KSNMKL KWE+FE
Sbjct: 149 ARFKRNCTNFGSLIEKSNMKLMKWENFE 172

[Close]

BLAST of Lag0016017 vs. TAIR 10
Match: AT3G04890.1 (Uncharacterized conserved protein (DUF2358) )

HSP 1 Score: 85.9 bits (211), Expect = 4.9e-17
Identity = 43/128 (33.59%), Postives = 64/128 (50.00%), Query Frame = 0


Query: 103 IVETIKEDFERSYFVTGNLTLDAYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMK 162
           ++  ++ D+   YFVTG LT   Y + C F DP  SF+G   ++RN       ++ ++++
Sbjct: 80  VMGILRSDYRNFYFVTGVLTSAIYSDDCIFEDPTISFQGTELYERNLKLLVPFLEDASIE 139

Query: 163 LTKWEDFEDKG----IGHWKFSCILSFPWRPILSATGYTEYYFDAGSGKVCRHVEHWNVP 222
           L   E  E       +  WK    L  PWRP++S  G T Y  D    K+ RHVE WNV 
Sbjct: 140 LQNMEKSESSQRNYILATWKLRTYLKLPWRPLISINGNTVYDLDK-DFKIVRHVESWNVS 199

Query: 223 KMALLKQI 227
            +  + QI
Sbjct: 200 ALEAIGQI 206

[Close]

BLAST of Lag0016017 vs. TAIR 10
Match: AT3G04890.2 (Uncharacterized conserved protein (DUF2358) )

HSP 1 Score: 68.9 bits (167), Expect = 6.2e-12
Identity = 33/104 (31.73%), Postives = 51/104 (49.04%), Query Frame = 0


Query: 103 IVETIKEDFERSYFVTGNLTLDAYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMK 162
           ++  ++ D+   YFVTG LT   Y + C F DP  SF+G   ++RN       ++ ++++
Sbjct: 80  VMGILRSDYRNFYFVTGVLTSAIYSDDCIFEDPTISFQGTELYERNLKLLVPFLEDASIE 139

Query: 163 LTKWEDFEDKG----IGHWKFSCILSFPWRPILSATGYTEYYFD 203
           L   E  E       +  WK    L  PWRP++S  G T Y  D
Sbjct: 140 LQNMEKSESSQRNYILATWKLRTYLKLPWRPLISINGNTVYDLD 183

The following BLAST results are available for this feature:

BLAST of Lag0016017 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906789.1	6.4e-120	88.84	uncharacterized protein LOC120092709 isoform X1 [Benincasa hispida]	[more]
XP_023547468.1	1.4e-119	89.58	uncharacterized protein LOC111806404 [Cucurbita pepo subsp. pepo]	[more]
XP_022959200.1	9.3e-119	88.75	uncharacterized protein LOC111460260 [Cucurbita moschata]	[more]
XP_023006651.1	2.3e-117	87.92	uncharacterized protein LOC111499312 [Cucurbita maxima]	[more]
KAG6575195.1	1.1e-116	87.14	hypothetical protein SDJN03_25834, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Lag0016017 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0016017 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H5M4	4.5e-119	88.75	uncharacterized protein LOC111460260 OS=Cucurbita moschata OX=3662 GN=LOC1114602...	[more]
A0A6J1KYC4	1.1e-117	87.92	uncharacterized protein LOC111499312 OS=Cucurbita maxima OX=3661 GN=LOC111499312...	[more]
A0A5D3BY85	6.7e-115	85.89	Nuclear transport factor 2 family protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3C8H3	6.7e-115	85.89	uncharacterized protein LOC103497690 OS=Cucumis melo OX=3656 GN=LOC103497690 PE=...	[more]
A0A6J1CZI8	1.3e-113	84.43	uncharacterized protein LOC111016220 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Lag0016017 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46100.1	3.7e-81	65.71	Nuclear transport factor 2 (NTF2) family protein	[more]
AT2G46100.2	5.2e-43	58.11	Nuclear transport factor 2 (NTF2) family protein	[more]
AT3G04890.1	4.9e-17	33.59	Uncharacterized conserved protein (DUF2358)	[more]
AT3G04890.2	6.2e-12	31.73	Uncharacterized conserved protein (DUF2358)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018790	Protein of unknown function DUF2358	PFAM	PF10184	DUF2358	coord: 103..211 e-value: 2.7E-11 score: 43.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..53
None	No IPR available	PANTHER	PTHR34123	FAMILY NOT NAMED	coord: 7..232
None	No IPR available	PANTHER	PTHR34123:SF1	OS04G0578200 PROTEIN	coord: 7..232
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	54427	NTF2-like	coord: 122..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0016017.1	Lag0016017.1	mRNA