Lag0016005 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0016005
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr12: 31179341 .. 31180348 (+)
RNA-Seq Expression	Lag0016005
Synteny	Lag0016005

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTTCTCTCCCTCATCTTTGGCTTGAGCTTCATGGTGGTAACTCCCTCCTGTCTGGCTCAAGACTCACTTGAGGATTTCGTGAATGCCCATAACACGGCTCGTGCCAAGGTTGGCGTCAGACCCGTCGAGTGGGATGAAAAAGTAGCAAGCTAGGCTCGACAATATGCAAACGAACGCATGAACGACTGTCAATTGATACACTCCACTGGTAGTCCATATGGGACGTTTCTTTTCACTTCATCTTCATCCTAAATTTATTCTTCACTTCCATTTTTTCTTTTGTTCTCTTCCGTTGTTGTGAATGGAAAAATATTGTAAGTCTAAAATGGCCAAAAAAGAGGAAGAAGGGAAAAAGATACTGAGGAAGGAGAGATGCCAGTTACACCTGAAGCACCAAAGACGAGAACGAAGAGAAGGAAAAACCAGAAGAGAGAGAGGCCAAAAGACGGAGAAGGCAACAAAAGCTTAAGCAACAGAGGTAGTGAGGAAAGTGATTGAATATCATCGAAGAAGTGGTTGGAGAAGAACAACCAAAAGAACTTGAAGTAGTGGCTGAGCAGTCGAAGGAACTAGAGGAAGGGAAAAATTTAGAGCCAGGTGATCAAATTGTCGAAACTCAGTAGAAGGTTCAGGAAAAGCAAGTAGAAGAAATGTCGAAACAAGGAAACAACCATTGAACCCAAGAGCAACAGGTTCAGGCGGGAATGTGCCAGAACCGTCGCGTCGTCGCCGCCGCAAGCAAAAGGTGGGATGTATCAAGGTGGTTAGGGTAGATACTTCATCTCCGTCAACAATGAAATCTGAGAGGAGAATACAGAAAATGAGGATCAAGAGAAAGAGGAAACTGAAAAGAAGGCTGAAGAAGAGGCCCTGACGAAGCAACAAGAAGACAGGGGCAAAGGTGTTGCTGAAGCAACGGTCGAAGCAGAGGAGGATGAAGCTGAGGAGCCAAGGATGTCATATGTGCGTTTCATCAACGATCTTGCCCGAGAAAATATCTAG

mRNA sequence

ATGGATTTTCTCTCCCTCATCTTTGGCTTGAGCTTCATGGTGGTAACTCCCTCCTGTCTGGCTCAAGACTCACTTGAGGATTTCGTGAATGCCCATAACACGGCTCGTGCCAAGGAAACAACCATTGAACCCAAGAGCAACAGGTTCAGGCGGGAATGTGCCAGAACCGTCGCGTCGTCGCCGCCGCAAGCAAAAGAAAATGAGGATCAAGAGAAAGAGGAAACTGAAAAGAAGGCTGAAGAAGAGGCCCTGACGAAGCAACAAGAAGACAGGGGCAAAGGTGTTGCTGAAGCAACGGTCGAAGCAGAGGAGGATGAAGCTGAGGAGCCAAGGATGTCATATGTGCGTTTCATCAACGATCTTGCCCGAGAAAATATCTAG

Coding sequence (CDS)

ATGGATTTTCTCTCCCTCATCTTTGGCTTGAGCTTCATGGTGGTAACTCCCTCCTGTCTGGCTCAAGACTCACTTGAGGATTTCGTGAATGCCCATAACACGGCTCGTGCCAAGGAAACAACCATTGAACCCAAGAGCAACAGGTTCAGGCGGGAATGTGCCAGAACCGTCGCGTCGTCGCCGCCGCAAGCAAAAGAAAATGAGGATCAAGAGAAAGAGGAAACTGAAAAGAAGGCTGAAGAAGAGGCCCTGACGAAGCAACAAGAAGACAGGGGCAAAGGTGTTGCTGAAGCAACGGTCGAAGCAGAGGAGGATGAAGCTGAGGAGCCAAGGATGTCATATGTGCGTTTCATCAACGATCTTGCCCGAGAAAATATCTAG

Protein sequence

MDFLSLIFGLSFMVVTPSCLAQDSLEDFVNAHNTARAKETTIEPKSNRFRRECARTVASSPPQAKENEDQEKEETEKKAEEEALTKQQEDRGKGVAEATVEAEEDEAEEPRMSYVRFINDLARENI

Homology

The following BLAST results are available for this feature:

BLAST of Lag0016005 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0016005 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 64..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0016005.1	Lag0016005.1	mRNA