Lag0015995 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0015995
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionPeptidase S74 domain-containing protein
Locationchr12: 30990878 .. 30993113 (+)
RNA-Seq ExpressionLag0015995
SyntenyLag0015995
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGACCATCCCTGCACGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAGTCACTGCAAATGAAGCTGATGACGACTGTGGTCACCACCCCTGCAAGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAATGAAGCTGATGACGACCGTGGTCACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAATGAAGCTGATGACGACCGTGGTGAACACCCTTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTACAAATGAAGCTGATGACGACCGTGGTGACCATCCTTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAATGAAGTTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAATGAAGCTGATGACGACCGTGGTGACCACCCTTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAAACAAGTGGTGAAATCACTGCAAGTGAATTTGGTGACGACTGTTGCACGAAGCTTACACATTCAAGGAAGAAAGAAACAAATTGCAAAAAAAAAAAAAAAAAAAAAAATCGAAAATTAAAAAAAAAATCGAAAATTAAAAAAAAAAAAAGAAAAGAAAGTTTCCTACTTGGATCCCTTCTTGAATGCTCTCTGCAATTGATGTGTGTTCTCCCCTACTAAGGTTTAGTTTATATATAAGGGGGTTTTAAGTTCAAATCAAAGGTTTAGATAAAGATTTGATTCAAATAAATCCTATCTCCGGTTCAAAATTTTATGAGATAATCTTTATCTTTATCTGAACCAACTTGATTAAATTGAAATTCTTAAAAGATAAGTGTTTCAGTTCAAATCAATTTGGGAATTCAAATTTTATCTAAATAATTTTATTTGGGCATACTCCAAATTTTTCTTCCAAATCAAAATTTGAGATTCAAAATCAAATTCTATTCCAAATGAAAATTTGAATTTGGTAAAATTTTACCTCAAATTAAATTTTGGCCATAATCCAAATTCTATCCCAAATGGACCAGAGTCCAAACCTCAAGTTCTATTCCATATGCAAGTTAAAATTGGGTAGGATTTTACCTCAAATCAAAATTTGGGTATAAATCAAATTTTGCCCAAACTTGAAATCAAAGTTTGCTGCCAAACAAGGAAAATCAAATTTTGACCAAACCTCAAATTTGATTAATTGGCGATAAAAGTGTGTCAAATAAAAAAATCAAAATTTTGACCAAAATTCATATTTTGATTAAATTGACGCACCAAATGGAGTCAAAGTCAAGAACAAATACCTTGCATTTTAATTCCAAAATATATTTTTCGAGATTCACTCACACACAACTTGTGCCTAAATCTCGAAAAGGGGGCATTTGTTGAAGGAGAAATTTCGGCCAATCACAAATTGTCACGTCATTAATATAAATTAACGATAAAATAAATTTGGGACCAATTACACATTTACATGTGTGCCTAAATTAAATTAATAGACATTAAAATTCGGCAAATCAAAGAATGCCACTTGTCTATTAGTGATCCATAAGATAACATCAGTCAGGTTCAATCAAATTATGCCACGTGGCAATTGAACCCAAGCCCAAGCCCATATAAGGTCCATCAAACTCTATAAATAGAGGAGGCCACCATTCATAAATAGGGGGATTCAGCCAGAGGCAGAGAGGGCAGAGTCCAGAGCATTCTCCCAAGATTCAGAGTCGTCATAATCCAAAGAGTCTAGAGAATTCAGAGATTCGGATTCAGAATTCAAAGGATTCAAGACTCAGAAGATTTAAAGACTAGAAGACTCTAAAAGAAATCAACAAGCCAATCGACTGATCAAGAAGATCAACAAGTCAGCAGGCCAATCATCCAAGAGGATCAACAAGCTAACAAGTCGATCCAACAAATCAACAAGCCAACAAGTTGATCCAAGAGATCATCACGCCAACAGGCCGATCATCCAAGAAGATCAACAAGCCAATAGGCCAATCCAAGAGATCATCAACCTAACAGACCGATCATCCAGGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCACGCCAACAGGCCGATCATCCAAGAAGATCAACAAGCCAATAG

mRNA sequence

ATGGTGACCATCCCTGCACGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAGTCACTGCAAATGAAGCTGATGACGACTGTGGTCACCACCCCTGCAAGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAATGAAGCTGATGACGACCGTGGTCACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAATGAAGCTGATGACGACCGTGGTGAACACCCTTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTACAAATGAAGCTGATGACGACCGTGGTGACCATCCTTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAATGAAGTTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAATGAAGCTGATGACGACCGTGGTGACCACCCTTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAAACAAGTGGTGAAATCACTGCAAGTGAATTTGAAGATCAACAAGTCAGCAGGCCAATCATCCAAGAGGATCAACAAGCTAACAAGTCGATCCAACAAATCAACAAGCCAACAAGTTGATCCAAGAGATCATCACGCCAACAGGCCGATCATCCAAGAAGATCAACAAGCCAATAGGCCAATCCAAGAGATCATCAACCTAACAGACCGATCATCCAGGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCACGCCAACAGGCCGATCATCCAAGAAGATCAACAAGCCAATAG

Coding sequence (CDS)

ATGGTGACCATCCCTGCACGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAGTCACTGCAAATGAAGCTGATGACGACTGTGGTCACCACCCCTGCAAGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAATGAAGCTGATGACGACCGTGGTCACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAATGAAGCTGATGACGACCGTGGTGAACACCCTTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTACAAATGAAGCTGATGACGACCGTGGTGACCATCCTTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAATGAAGTTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAATGAAGCTGATGACGACCGTGGTGACCACCCTTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAAACAAGTGGTGAAATCACTGCAAGTGAATTTGAAGATCAACAAGTCAGCAGGCCAATCATCCAAGAGGATCAACAAGCTAACAAGTCGATCCAACAAATCAACAAGCCAACAAGTTGATCCAAGAGATCATCACGCCAACAGGCCGATCATCCAAGAAGATCAACAAGCCAATAGGCCAATCCAAGAGATCATCAACCTAACAGACCGATCATCCAGGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCACGCCAACAGGCCGATCATCCAAGAAGATCAACAAGCCAATAG

Protein sequence

MVTIPARNYSHQSDWSRQVVKSLQMKLMTTVVTTPARNYSHQSDWSRQVVKSLQMKLMTTVVTTPAGNYSHQSDWSRQVVKSLQMKLMTTVVNTLAGNYSHQSDWSRQVVKSLQMKLMTTVVTILAGNYSHQSDWSRQVVKSLQMKLMTTVVTTPAGNYSHQSDWSRQVVKSLQMKLMTTVVTTLAGNYSHQSDWSKQVVKSLQVNLKINKSAGQSSKRINKLTSRSNKSTSQQVDPRDHHANRPIIQEDQQANRPIQEIINLTDRSSRKINKPTSRSKRSSRQQADHPRRSTSQ
Homology
[Close]
BLAST of Lag0015995 vs. ExPASy TrEMBL
Match: A0A6C0LDK3 (Peptidase S74 domain-containing protein (Fragment) OS=viral metagenome OX=1070528 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 7.9e-09
Identity = 52/179 (29.05%), Postives = 104/179 (58.10%), Query Frame = 0 

Query: 59  TTVVTTPAGNYSHQSDWSRQVVKSLQMKLMTTVVNTLAGNYSHQSDWSRQVVKSLQMKLM 118
           TTV+T+   N S+ S++ + V  +L   + TTV+ ++  N S+ S++ + V  +L + + 
Sbjct: 6   TTVLTSIDSNNSNVSNYIKAVDSNLNNVINTTVLTSIDSNNSNVSNYIQAVDSNLNVIIN 65

Query: 119 TTVVTILAGNYSHQSDWSRQVVKSLQMKLMTTVVTTPAGNYSHQSDWSRQVVKSLQMKLM 178
           TTV+T +  N S+ S++ + V  +L + + TTV+T+   N S+ S++ + V  +L   + 
Sbjct: 66  TTVLTSIDSNNSNVSNYIKAVDSNLNVIINTTVLTSIDSNNSNVSNYIKAVDSNLNTIIN 125

Query: 179 TTVVTTLAGNYSHQSDWSKQVVKSLQVNLKINKSAGQS-----SKRINKLTSRSNKSTS 233
           TTV+T++  N S+ S++ K V  +L+V + I  +A  +     + R++ + S +N + S
Sbjct: 126 TTVLTSIDSNNSNVSNYIKAVDSNLKVIINIKDTALSNYSLGINDRLSGIISANNNTMS 184

[Close]
BLAST of Lag0015995 vs. ExPASy TrEMBL
Match: A0A6C0LCS6 (Uncharacterized protein (Fragment) OS=viral metagenome OX=1070528 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.0e-08
Identity = 48/161 (29.81%), Postives = 93/161 (57.76%), Query Frame = 0 

Query: 43  SDWSRQVVKSLQMKLMTTVVTTPAGNYSHQSDWSRQVVKSLQMKLMTTVVNTLAGNYSHQ 102
           S++   V  +L   + TTV+T+   N S+ S++ + V  +L   + TTV+ ++  N S+ 
Sbjct: 119 SNYINAVDSNLNTIINTTVITSIDSNNSNVSNYIQAVDSNLNNIINTTVLTSIDSNNSNV 178

Query: 103 SDWSRQVVKSLQMKLMTTVVTILAGNYSHQSDWSRQVVKSLQMKLMTTVVTTPAGNYSHQ 162
           S++ + V  +L + + TTV+T +  N S+ S++ + V  +L   + TTV+T+   N S+ 
Sbjct: 179 SNYIQAVDSNLNVIINTTVLTSIDSNNSNVSNYIQAVDSNLNNIINTTVLTSIDSNNSNV 238

Query: 163 SDWSRQVVKSLQMKLMTTVVTTLAGNYSHQSDWSKQVVKSL 204
           S++ + V  +L   + TTV+T++  N S+ S++ K V  +L
Sbjct: 239 SNYIKAVDSNLNNIINTTVLTSIDSNNSNVSNYIKAVDSNL 279

The following BLAST results are available for this feature:
BLAST of Lag0015995 vs.
Match NameE-valueIdentityDescription
BLAST of Lag0015995 vs.
Match NameE-valueIdentityDescription
BLAST of Lag0015995 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6C0LDK37.9e-0929.05Peptidase S74 domain-containing protein (Fragment) OS=viral metagenome OX=107052... [more]
A0A6C0LCS61.0e-0829.81Uncharacterized protein (Fragment) OS=viral metagenome OX=1070528 PE=4 SV=1[more]
BLAST of Lag0015995 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..295
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 280..295
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..269

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0015995.1Lag0015995.1mRNA