Lag0015984 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0015984
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
Location	chr12: 30757432 .. 30758076 (-)
RNA-Seq Expression	Lag0015984
Synteny	Lag0015984

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGAATTGGGAATTCCAATCCTTCAGTTCAAGGTACCTACATTCAAACCGTATGATGACAAGAAAGATCTCGTACAACATATAAACGCCTACAGGAACTTGATGGACTTCCACGGCGTCTCAAATGCAACCAGGTGTCGCGCCTTCTCTTCCACTCTGACAGGATCGGCTAAGTAGTGGTTTGAAAGGTTAAAAAGGAGATCCATCAGCTCTTTCAAGGAATTAGCCCAAGCGTTCCTCGCACAGTTTATGGGAGCCAGAGAACAGTGCAAGCCTCACATCAACCTCTTAACCGTCAAACAACAGCCAAGTGAGAGCTTGTGCGACTATATAACACGTTTTAACGAGGAAGAACTGTAGGTTGAAGGATACAGTGAGGGAGTAGCCCTAGTAGCCATCACAACCGGACTGGAAGATGAGAGATTACTCAATTCAATAGGTAAGAGCCAACCTCGAACCTATGCTGAGTTTGTTTCCAGGGCACAGAAGTATATGAGCGCAGAAGAATTACTGAAATCAAAGAGGTCAAAACGAGACCTTAAGAGACATTCTACAGTCGATCATGACAGAAAGAAAGATAAGAGACAGCGGACAGACGATGGTGACCGAGGCCGAGCCGACCATGACCATGGTCAAGGCTGA

mRNA sequence

ATGACGGAATTGGGAATTCCAATCCTTCAGTTCAAGGTACCTACATTCAAACCGTATGATGACAAGAAAGATCTCGTACAACATATAAACGCCTACAGGAACTTGATGGACTTCCACGGCGTCTCAAATGCAACCAGTGAGGGAGTAGCCCTAGTAGCCATCACAACCGGACTGGAAGATGAGAGATTACTCAATTCAATAGGTAAGAGCCAACCTCGAACCTATGCTGAGTTTGTTTCCAGGGCACAGAAGTATATGAGCGCAGAAGAATTACTGAAATCAAAGAGGTCAAAACGAGACCTTAAGAGACATTCTACAGTCGATCATGACAGAAAGAAAGATAAGAGACAGCGGACAGACGATGGTGACCGAGGCCGAGCCGACCATGACCATGGTCAAGGCTGA

Coding sequence (CDS)

ATGACGGAATTGGGAATTCCAATCCTTCAGTTCAAGGTACCTACATTCAAACCGTATGATGACAAGAAAGATCTCGTACAACATATAAACGCCTACAGGAACTTGATGGACTTCCACGGCGTCTCAAATGCAACCAGTGAGGGAGTAGCCCTAGTAGCCATCACAACCGGACTGGAAGATGAGAGATTACTCAATTCAATAGGTAAGAGCCAACCTCGAACCTATGCTGAGTTTGTTTCCAGGGCACAGAAGTATATGAGCGCAGAAGAATTACTGAAATCAAAGAGGTCAAAACGAGACCTTAAGAGACATTCTACAGTCGATCATGACAGAAAGAAAGATAAGAGACAGCGGACAGACGATGGTGACCGAGGCCGAGCCGACCATGACCATGGTCAAGGCTGA

Protein sequence

MTELGIPILQFKVPTFKPYDDKKDLVQHINAYRNLMDFHGVSNATSEGVALVAITTGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSKRSKRDLKRHSTVDHDRKKDKRQRTDDGDRGRADHDHGQG

Homology

[Close]

BLAST of Lag0015984 vs. NCBI nr
Match: GFY94598.1 (hypothetical protein Acr_09g0010440 [Actinidia rufa])

HSP 1 Score: 58.2 bits (139), Expect = 6.5e-05
Identity = 41/125 (32.80%), Postives = 66/125 (52.80%), Query Frame = 0


Query: 10  QFKVPT-FKPYDDKKDLVQHINAYRNLMDFHGVSN-------------ATSEGVALVAIT 69
           +FK+PT    Y+ K D + H+++Y++LM   G S+               S+ V ++A+ 
Sbjct: 131 KFKLPTQLGIYEGKTDPMDHLDSYKSLMSLQGCSDEVMCKAFSATLKGPASDKVIIMAMM 190

Query: 70  TGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSKRSKRDLKRHSTVDHDRKKDK 121
            GL    L +S+ K+ P T +   S+A KY+ AEEL ++KR     +R    DH RK+  
Sbjct: 191 EGLRPGPLFDSLSKNVPETLSALQSKADKYIVAEELAEAKR-----RRRGKDDHKRKEPD 250

[Close]

BLAST of Lag0015984 vs. NCBI nr
Match: GFY81010.1 (hypothetical protein Acr_01g0008190 [Actinidia rufa])

HSP 1 Score: 57.8 bits (138), Expect = 8.5e-05
Identity = 40/119 (33.61%), Postives = 65/119 (54.62%), Query Frame = 0


Query: 10  QFKVPT-FKPYDDKKDLVQHINAYRNLMDFHGVSNAT-------SEGVALVAITTGLEDE 69
           +FK+PT    Y+ K D + H+++Y++ M   G S+         S+ V ++A+  GL   
Sbjct: 135 KFKLPTQLGIYEGKIDPMDHLDSYKSSMSLQGCSDEAILEVEDPSDKVIIMAMMEGLRPG 194

Query: 70  RLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSKRSKRDLKRHSTVDHDRKKDKRQRTD 121
            L +S+ K+ P T +   S+A KY+SAEEL ++KR     +R    DH RK+   +R D
Sbjct: 195 PLFDSLSKNVPETLSALQSKADKYISAEELAEAKR-----RRRGKDDHKRKEPNTRRID 248

[Close]

BLAST of Lag0015984 vs. NCBI nr
Match: GFY87072.1 (hypothetical protein Acr_05g0007110 [Actinidia rufa])

HSP 1 Score: 57.0 bits (136), Expect = 1.5e-04
Identity = 38/114 (33.33%), Postives = 64/114 (56.14%), Query Frame = 0


Query: 10  QFKVPT-FKPYDDKKDLVQHINAYRNLMDFHGVSNA--TSEGVALVAITTGLEDERLLNS 69
           +FK+PT    Y+ K D + H+++Y++LM    V +    S+ V ++A+  GL    L +S
Sbjct: 161 KFKLPTQLGIYEGKTDPMDHLDSYKSLMSSRAVLDVEDPSDKVIIMAMMEGLRPGPLFDS 220

Query: 70  IGKSQPRTYAEFVSRAQKYMSAEELLKSKRSKRDLKRHSTVDHDRKKDKRQRTD 121
           + K+ P T +   S+A KY++AEEL ++K      +R    DH RK+   +R D
Sbjct: 221 LSKNVPETLSALQSKADKYIAAEELAEAK-----CRRRGKEDHKRKEPDTRRAD 269

[Close]

BLAST of Lag0015984 vs. NCBI nr
Match: GFZ19195.1 (hypothetical protein Acr_27g0009340 [Actinidia rufa])

HSP 1 Score: 57.0 bits (136), Expect = 1.5e-04
Identity = 41/128 (32.03%), Postives = 67/128 (52.34%), Query Frame = 0


Query: 10  QFKVPT-FKPYDDKKDLVQHINAYRNLMDFHGVSNAT----------------SEGVALV 69
           +FK+PT    Y+ K D + H+++Y++LM   G S+                  S+ V ++
Sbjct: 191 KFKLPTQLGIYEGKTDPMDHLDSYKSLMYLQGCSDEVMCKAFSATLKGPARIPSDKVIIM 250

Query: 70  AITTGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSKRSKRDLKRHSTVDHDRK 121
           A+  GL    L +S+ K+ P T +   S+A KY++AEEL ++KR     +R    DH RK
Sbjct: 251 AMMEGLRPGPLFDSLSKNVPETLSALQSKADKYIAAEELAEAKR-----RRRGKDDHKRK 310

[Close]

BLAST of Lag0015984 vs. NCBI nr
Match: GFZ19944.1 (hypothetical protein Acr_28g0006490 [Actinidia rufa])

HSP 1 Score: 56.6 bits (135), Expect = 1.9e-04
Identity = 40/128 (31.25%), Postives = 66/128 (51.56%), Query Frame = 0


Query: 10  QFKVPT-FKPYDDKKDLVQHINAYRNLMDFHGVSNAT----------------SEGVALV 69
           +FK+PT    Y+ K D + H+++Y++LM   G S+                  S+ V ++
Sbjct: 66  KFKLPTQLGIYEGKTDPMDHLDSYKSLMSLQGCSDEVMCKAFSATFERTGQDPSDKVIIM 125

Query: 70  AITTGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSAEELLKSKRSKRDLKRHSTVDHDRK 121
           A+  GL    L +S+ K+ P T +   S+A KY++AEEL ++KR     +R    DH RK
Sbjct: 126 AMMEGLRPGPLFDSLSKNVPETLSALQSKADKYIAAEELAEAKR-----RRRGKEDHKRK 185

The following BLAST results are available for this feature:

BLAST of Lag0015984 vs. NCBI nr


Match Name	E-value	Identity	Description
GFY94598.1	6.5e-05	32.80	hypothetical protein Acr_09g0010440 [Actinidia rufa]	[more]
GFY81010.1	8.5e-05	33.61	hypothetical protein Acr_01g0008190 [Actinidia rufa]	[more]
GFY87072.1	1.5e-04	33.33	hypothetical protein Acr_05g0007110 [Actinidia rufa]	[more]
GFZ19195.1	1.5e-04	32.03	hypothetical protein Acr_27g0009340 [Actinidia rufa]	[more]
GFZ19944.1	1.9e-04	31.25	hypothetical protein Acr_28g0006490 [Actinidia rufa]	[more]

BLAST of Lag0015984 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0015984.1	Lag0015984.1	mRNA