Lag0015936 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTCGAAACTACAGAAGAAAGAACATGTCACAAAAGCAAAGGAGAAAGATAAAAAGTTTGAGAAAGCCTAAACTAGTTGTCGAAGAGAATCAAGATTTTGTTCTAACTCGACATTTGGTAACCCTTAAAGATTTCTTCCCAAAGAACTTTCTTAATGATGATCATGAAGACATCCCTAAGATAGTCGCATGTCATGCTGTCAATGCATTCGAAGAAGGCGATTCTTCCTCAAGTCCATCTCAGGTGATGACAAGGCCAGAAGATTCACCTTCATTTACAATAGATGATTTATTGTCATTTCCTCAAGAAACCAAAGATACTATTGTTGAAACATTTAAAAGTTCTAACGTTTCAGACGTTCCAGACTTGCAAGAACACAAATGTGCCTCATGTTATATGTCCATTAGCTTTACAGATGAAGATTTGATGATGGGATTGAAGCCTCATTATAGGCCTTTATTCGTCTCAGGATATATTCGAGAGCAAAAAGTTCGCCTAAGTCAACCATGA ATGTTTCGAAACTACAGAAGAAAGAACATGTCACAAAAGCAAAGGAGAAAGATAAAAAGTTTGAGAAAGCCTAAACTAGTTGTCGAAGAGAATCAAGATTTTGTTCTAACTCGACATTTGGTAACCCTTAAAGATTTCTTCCCAAAGAACTTTCTTAATGATGATCATGAAGACATCCCTAAGATAGTCGCATGTCATGCTGTCAATGCATTCGAAGAAGGCGATTCTTCCTCAAGTCCATCTCAGGTGATGACAAGGCCAGAAGATTCACCTTCATTTACAATAGATGATTTATTGTCATTTCCTCAAGAAACCAAAGATACTATTGTTGAAACATTTAAAAGTTCTAACGTTTCAGACGTTCCAGACTTGCAAGAACACAAATGTGCCTCATGTTATATGTCCATTAGCTTTACAGATGAAGATTTGATGATGGGATTGAAGCCTCATTATAGGCCTTTATTCGTCTCAGGATATATTCGAGAGCAAAAAGTTCGCCTAAGTCAACCATGA ATGTTTCGAAACTACAGAAGAAAGAACATGTCACAAAAGCAAAGGAGAAAGATAAAAAGTTTGAGAAAGCCTAAACTAGTTGTCGAAGAGAATCAAGATTTTGTTCTAACTCGACATTTGGTAACCCTTAAAGATTTCTTCCCAAAGAACTTTCTTAATGATGATCATGAAGACATCCCTAAGATAGTCGCATGTCATGCTGTCAATGCATTCGAAGAAGGCGATTCTTCCTCAAGTCCATCTCAGGTGATGACAAGGCCAGAAGATTCACCTTCATTTACAATAGATGATTTATTGTCATTTCCTCAAGAAACCAAAGATACTATTGTTGAAACATTTAAAAGTTCTAACGTTTCAGACGTTCCAGACTTGCAAGAACACAAATGTGCCTCATGTTATATGTCCATTAGCTTTACAGATGAAGATTTGATGATGGGATTGAAGCCTCATTATAGGCCTTTATTCGTCTCAGGATATATTCGAGAGCAAAAAGTTCGCCTAAGTCAACCATGA MFRNYRRKNMSQKQRRKIKSLRKPKLVVEENQDFVLTRHLVTLKDFFPKNFLNDDHEDIPKIVACHAVNAFEEGDSSSSPSQVMTRPEDSPSFTIDDLLSFPQETKDTIVETFKSSNVSDVPDLQEHKCASCYMSISFTDEDLMMGLKPHYRPLFVSGYIREQKVRLSQP Homology
BLAST of Lag0015936 vs. NCBI nr
Match: KAA0032810.1 (uncharacterized protein E6C27_scaffold708G00640 [Cucumis melo var. makuwa] >TYK30368.1 uncharacterized protein E5676_scaffold575G00350 [Cucumis melo var. makuwa]) HSP 1 Score: 135.2 bits (339), Expect = 5.3e-28 Identity = 81/169 (47.93%), Postives = 106/169 (62.72%), Query Frame = 0
BLAST of Lag0015936 vs. NCBI nr
Match: KAA0035943.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK30459.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 130.2 bits (326), Expect = 1.7e-26 Identity = 76/166 (45.78%), Postives = 101/166 (60.84%), Query Frame = 0
BLAST of Lag0015936 vs. NCBI nr
Match: KAA0056780.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYJ97603.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 129.0 bits (323), Expect = 3.8e-26 Identity = 75/166 (45.18%), Postives = 104/166 (62.65%), Query Frame = 0
BLAST of Lag0015936 vs. NCBI nr
Match: TYK15313.1 (uncharacterized protein E5676_scaffold1706G00210 [Cucumis melo var. makuwa]) HSP 1 Score: 127.9 bits (320), Expect = 8.5e-26 Identity = 76/164 (46.34%), Postives = 101/164 (61.59%), Query Frame = 0
BLAST of Lag0015936 vs. NCBI nr
Match: KAA0039557.1 (uncharacterized protein E6C27_scaffold744G00270 [Cucumis melo var. makuwa] >TYK01742.1 uncharacterized protein E5676_scaffold775G00710 [Cucumis melo var. makuwa]) HSP 1 Score: 127.5 bits (319), Expect = 1.1e-25 Identity = 74/166 (44.58%), Postives = 102/166 (61.45%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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