Lag0015918 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCGATCCGCCTGGGGTACGGTTTGAGCTTGATCCAGAAATTGAAAGGACATTTAGGAACAGAAGGAGGGAGCAGCGTAGAAACCAGATGGAGAACGCCCCGCAACTTCCGCAGGTTCCTGAAGGTCCAGCAGCAGCAAACCCCAGCAGAATCCGTTGCTGCAGCAAAACCCACTGTTTGAGCAAAATGAGCAGCGAAATAATCAGGCTGAGAATCCTATCTTGATAGCGAACGATAGGACCAGAGCATTCGAGCATATGCTGTCCCGATGTTTAATGAGTTGAATCCAGGGATTGCACGTCCCCATATCCAAGCGGCAAATTTTGAAATGAAACCGGTAATGTTTCAGATGTTGCAAACCGTGGGGCAATTCCATGGTTTGTCATCTGAAGACCCTCATTTACATCTTAAGTCTTTTCTAGGAGTTAGTGATTCTTTTGTAATTCAAAGAGTGCCTAGAGATGCTCTTAGATTAACTTTGTTCCGTATTCTCTTAGAGATGGAGCAAAGTCATGGTTAAACTCTTTTGCTCCAGGATCAATTAGGACGTGGGATGAGTTAGCTGAAAATTTTTTGAGTAAATATTTCCCACCTAATAGAAATGCAAATTAAGGAGTGAAATAGTATGGTTTAGGCCACTTGAGGATGAGACTTTTAGTGAGGCTTGGGAGAGGTTTAAGGAGCTTTTACGAAAGTGTCCCCACCATGGGTTACCTCATTGTATTCAAATGGAAACATTTTACAATGGTTTAAATGGAGTAACCCAAGGTATGGTCGATGCCTCGGCTGGAGGGGCCCTTTTGGCAAAAACTTTTGATGAAGCCTATGAAATTTTAGAAAGAATATCATTAATAGTTGTCAGTGGTCGGATGTTAGAGGCACAAATAAAAAGGTTAAGAGTGTATTAGAGGTTGATGGTGTGTCCACTATTAGGGCCGATCTTGCTATGATTGCTAATGCTCTTAAGAATGTGACAGTGATTAGTCATCAGCAGCCACCAGCTATGGAGCCTGCAGCAGTGGTGAACCAAGTCACGGACGAAGCATGTGTCTATTGCGGTGAAGACCACAACTACGAGTTTTGCCCCAGCAATCCAGCTTCTGTGTTTTTTGTAGGTAATCAGAGGAACAACCCTTATTCTAACTTTTATAATCCAGGTTGGCGCAACCACCCCAACTTCTCATGGGGAGTCAAGGAAATAACGTACAAGCGCAACAGAAGATGAACCAGCCGGGATTTGCTAAAGCGCAGGTAATGCCCCAGCAAAATAACCGGCTTTGCCCCAGCAAAATTCGGGAAATCCTCTCGAGGCAATGATGAAAGAATTTATGGCTCGCACAGATGCCGCAATTCAAAGTAATCAAGCTTCGATGAGGGCCCTGGAATTGCAAGTGGGTTAGCTAGCTAATGAGCTCAAGGCGAGGCCTCAAGGGAAACTTCCTTCGGATACTGAACACCCTCGAAGGGAAGGTAAGGAGCAGGTAAAGGCAGTAACTCTTAGGAGTGGTAAGCCACTAGAAGAGTCTAGAAAGACCCAGGATTTAAATAGTAATAGAAATAATAATGTTGTTATTGAGAAAGAGTTGGAGTCTGGACAGGGTGCTGGAGGCAGCAAAGAGAATGCTGGAGCATCTGGTTCTGTGCCAGATGTAGAAGCACCATATGTGCCGCCCCCACCTTATGTACCACCTCTACCTTTTCCACAAAGGCAAAAGCCTAAGAATAGGATGGTCAATTTAAAAAGTTTTTAGAGATTCTTAAGCAGTTGCATATAAATATCCCTTTAGTAGAAGCTATAGAGCAAATGCCTAATTATGCTAAATTTCTTAAGGATATTTTGACTAAAAAGAAAAGGTTAGGTGAGTTTGAAACTGTATCTCTTACTGAGGAGTGTAGTGTGATTATCAAGAATGGTCTACCCCCAAGGCTAAGGATCCAGGGTCATTTACCATACCTGTGTCTATAGGTGGAAAGGAATTAGGTAGAGCACTCTGTGATTTAGGTGCAAGCATTAACCTTATGCCTCTTTCGGTCTATCGGAAGTTAGGTATTGGTGAAGCTAGTCCTACCATAGTTACACTCCAACTAGCTGATAGGTCTATCACATATCCAGAGGGTAAAATTGAGGATGTCTTAGTAAAAGTGGATAAATTCATATTTCCGGTTGATTTTATTATTTTAGACTATGAGGCTGATAAAGATGTCCCAATTATTCTAGGTCGTCCATTTTTGGCTACTGGTAGGGCATTAATAGATGTTCAAAAAGGAGAATTAACAATGAGAGTCTGTAATGAGGAAGTGAAATTTAATGTGTTTAAAGCCATGAAATATCCAGACGAAATGGAGGATTGCTCCTTCATTAGGATTCTGGAGAGCACAGTTATTGAGACAGCAATACAGGATTCGGCTGATAAGCATTCAGAAAAGCATGGAGAGGTTAGTGTAGAAGATTTTGAATCTTGTTCTTTAGATAGAAGAAATGAAAAAGAATTGTTTAGGTGTGAGGATGTTTTTGAGTCTTTAGATTTAGATCAAAGAAAGGCTCCCCCAATTAAACCATCCCTGATGAGGCACCTACTTTAGATTTGAAGCCTTTACCAGATCATCTAAAGTATGTGTATCTTGGGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTGAGACGTTGCCCATTATTGTTGCATCAGATTTAATACCGGAGCATGAGGAGGCCTTAATAAAATTGCTGCAGCAATACCGCAAAGCTATAGGTTGGACATTAGCTGATATTCAGGGAATTAGCCTATCTTTTTGTATGCACAAAATCACTCTAGAGGAGGGATCCTTTAGGAGTATTGAGCAACAAAGAAGGCTTAACCCTGCAATGAAAGAGGTTGTTAAAAAGGAGGTAATTAAATGGTTGGATGTTGGGATCATTTATCCAATTGCCGATAGCAATTGGGTAAGCCCTGTCCAATGTGTTCCTAAGAAAGGAGGTGTCACTGTGGTGAGCAATAAAGATAATGAGTTGATCCCCACAAGGACAGTAACTGGCTGGAGGGTTTGTATGGATTACAGAAGGCTTAATAAAGCCACTCGAAAGGATCATTTCCCTCTACCATTTATCGACAAGATGTTGGATCGATTGGCTGGTCAGGCCTATTACTGTTTCTTGGATGGTTATTCTGGGTATAACCAGATTACTATTGCTCCTGAAGATCGGGAAAAAACCACTTTCACCTGCCCTTATGGGACATTCGCTTTTAGGAGAATGCCTTTTGGCCTTTTGGCCTTTGCAATGCTCCAACAACATTTCAGTGGTGTATGTTAG ATGAGCGATCCGCCTGGGGTACGGTTTGAGCTTGATCCAGAAATTGAAAGGACATTTAGGAACAGAAGGAGGGAGCAGCGTAGAAACCAGATGGAGAACGCCCCGCAACTTCCGCAGGACCAGAGCATTCGAGCATATGCTGTCCCGATGTTTAATGAGTTGAATCCAGGGATTGCACGTCCCCATATCCAAGCGGCAAATTTTGAAATGAAACCGGTAATGTTTCAGATGTTGCAAACCGTGGGGCAATTCCATGGTTTGTCATCTGAAGACCCTCATTTACATCTTAAGTCTTTTCTAGGAGTTAGTGATTCTTTTGTAATTCAAAGAGTGCCTAGAGATGCTCTTAGATTAACTTTGTTCCGTATTCTCTTAGAGATGGAGCAAAGTCATGTGATTAGTCATCAGCAGCCACCAGCTATGGAGCCTGCAGCAGTGGTGAACCAAGTCACGGACGAAGCATGTGTCTATTGCGGTGAAGACCACAACTACGAGTTTTGCCCCAGCAATCCAGCTTCTGTGTTGGCGCAACCACCCCAACTTCTCATGGGGAGTCAAGGAAATAACGTACAAGCGCAACAGAAGATGAACCAGCCGGGATTTGCTAAAGCGCAGCTAGCTAATGAGCTCAAGGCGAGGCCTCAAGGGAAACTTCCTTCGGATACTGAACACCCTCGAAGGGAAGGTAAGGAGCAGGTAAAGGCAGTAACTCTTAGGAGTGGTAAGCCACTAGAAGAGTCTAGAAAGACCCAGGATTTAAATAGTAATAGAAATAATAATGTTGTTATTGAGAAAGAGTTGGAGTCTGGACAGGGTGCTGGAGGCAGCAAAGAGAATGCTGGAGCATCTGGTTCTGTGCCAGATGTAGAAGCACCATATGTGCCGCCCCCACCTTATGTACCACCTCTACCTTTTCCACAAAGGCAAAAGCCTAAGAATAGGATGTGTGATTATCAAGAATGGTCTACCCCCAAGGCTAAGGATCCAGGGTCATTTACCATACCTGTGTCTATAGGTGGAAAGGAATTAGGTAGAGCACTCTGTGATTTAGGTGCAAGCATTAACCTTATGCCTCTTTCGGTCTATCGGAAGTTAGGTATTGGTGAAGCTAGTCCTACCATAGTTACACTCCAACTAGCTGATAGGTCTATCACATATCCAGAGGGTAAAATTGAGGATGTCTTAGTAAAAGTGGATAAATTCATATTTCCGGTTGATTTTATTATTTTAGACTATGAGGCTGATAAAGATGTCCCAATTATTCTAGGTCGTCCATTTTTGGCTACTGGTAGGGCATTAATAGATGTTCAAAAAGGAGAATTAACAATGAGAGTCTGTAATGAGGAAGTGAAATTTAATGTGTTTAAAGCCATGAAATATCCAGACGAAATGGAGGATTGCTCCTTCATTAGGATTCTGGAGAGCACAGTTATTGAGACAGCAATACAGGATTCGGCTGATAAGCATTCAGAAAAGCATGGAGAGCAATACCGCAAAGCTATAGGTTGGACATTAGCTGATATTCAGGGAATTAGCCTATCTTTTTGTATGCACAAAATCACTCTAGAGGAGGGATCCTTTAGGAGTATTGAGCAACAAAGAAGGCTTAACCCTGCAATGAAAGAGGTTGTTAAAAAGGAGGTAATTAAATGGTTGGATGTTGGGATCATTTATCCAATTGCCGATAGCAATTGGGTAAGCCCTGTCCAATGTGTTCCTAAGAAAGGAGGTGTCACTGTGGTGAGCAATAAAGATAATGAGTTGATCCCCACAAGGACAGTAACTGGCTGGAGGGTTTGTATGGATTACAGAAGGCTTAATAAAGCCACTCGAAAGGATCATTTCCCTCTACCATTTATCGACAAGATGTTGGATCGATTGGCTGGTCAGGCCTATTACTGTTTCTTGGATGGTTATTCTGGGTATAACCAGATTACTATTGCTCCTGAAGATCGGGAAAAAACCACTTTCACCTGCCCTTATGGGACATTCGCTTTTAGGAGAATGCCTTTTGGCCTTTTGGCCTTTGCAATGCTCCAACAACATTTCAGTGGTGTATGTTAG ATGAGCGATCCGCCTGGGGTACGGTTTGAGCTTGATCCAGAAATTGAAAGGACATTTAGGAACAGAAGGAGGGAGCAGCGTAGAAACCAGATGGAGAACGCCCCGCAACTTCCGCAGGACCAGAGCATTCGAGCATATGCTGTCCCGATGTTTAATGAGTTGAATCCAGGGATTGCACGTCCCCATATCCAAGCGGCAAATTTTGAAATGAAACCGGTAATGTTTCAGATGTTGCAAACCGTGGGGCAATTCCATGGTTTGTCATCTGAAGACCCTCATTTACATCTTAAGTCTTTTCTAGGAGTTAGTGATTCTTTTGTAATTCAAAGAGTGCCTAGAGATGCTCTTAGATTAACTTTGTTCCGTATTCTCTTAGAGATGGAGCAAAGTCATGTGATTAGTCATCAGCAGCCACCAGCTATGGAGCCTGCAGCAGTGGTGAACCAAGTCACGGACGAAGCATGTGTCTATTGCGGTGAAGACCACAACTACGAGTTTTGCCCCAGCAATCCAGCTTCTGTGTTGGCGCAACCACCCCAACTTCTCATGGGGAGTCAAGGAAATAACGTACAAGCGCAACAGAAGATGAACCAGCCGGGATTTGCTAAAGCGCAGCTAGCTAATGAGCTCAAGGCGAGGCCTCAAGGGAAACTTCCTTCGGATACTGAACACCCTCGAAGGGAAGGTAAGGAGCAGGTAAAGGCAGTAACTCTTAGGAGTGGTAAGCCACTAGAAGAGTCTAGAAAGACCCAGGATTTAAATAGTAATAGAAATAATAATGTTGTTATTGAGAAAGAGTTGGAGTCTGGACAGGGTGCTGGAGGCAGCAAAGAGAATGCTGGAGCATCTGGTTCTGTGCCAGATGTAGAAGCACCATATGTGCCGCCCCCACCTTATGTACCACCTCTACCTTTTCCACAAAGGCAAAAGCCTAAGAATAGGATGTGTGATTATCAAGAATGGTCTACCCCCAAGGCTAAGGATCCAGGGTCATTTACCATACCTGTGTCTATAGGTGGAAAGGAATTAGGTAGAGCACTCTGTGATTTAGGTGCAAGCATTAACCTTATGCCTCTTTCGGTCTATCGGAAGTTAGGTATTGGTGAAGCTAGTCCTACCATAGTTACACTCCAACTAGCTGATAGGTCTATCACATATCCAGAGGGTAAAATTGAGGATGTCTTAGTAAAAGTGGATAAATTCATATTTCCGGTTGATTTTATTATTTTAGACTATGAGGCTGATAAAGATGTCCCAATTATTCTAGGTCGTCCATTTTTGGCTACTGGTAGGGCATTAATAGATGTTCAAAAAGGAGAATTAACAATGAGAGTCTGTAATGAGGAAGTGAAATTTAATGTGTTTAAAGCCATGAAATATCCAGACGAAATGGAGGATTGCTCCTTCATTAGGATTCTGGAGAGCACAGTTATTGAGACAGCAATACAGGATTCGGCTGATAAGCATTCAGAAAAGCATGGAGAGCAATACCGCAAAGCTATAGGTTGGACATTAGCTGATATTCAGGGAATTAGCCTATCTTTTTGTATGCACAAAATCACTCTAGAGGAGGGATCCTTTAGGAGTATTGAGCAACAAAGAAGGCTTAACCCTGCAATGAAAGAGGTTGTTAAAAAGGAGGTAATTAAATGGTTGGATGTTGGGATCATTTATCCAATTGCCGATAGCAATTGGGTAAGCCCTGTCCAATGTGTTCCTAAGAAAGGAGGTGTCACTGTGGTGAGCAATAAAGATAATGAGTTGATCCCCACAAGGACAGTAACTGGCTGGAGGGTTTGTATGGATTACAGAAGGCTTAATAAAGCCACTCGAAAGGATCATTTCCCTCTACCATTTATCGACAAGATGTTGGATCGATTGGCTGGTCAGGCCTATTACTGTTTCTTGGATGGTTATTCTGGGTATAACCAGATTACTATTGCTCCTGAAGATCGGGAAAAAACCACTTTCACCTGCCCTTATGGGACATTCGCTTTTAGGAGAATGCCTTTTGGCCTTTTGGCCTTTGCAATGCTCCAACAACATTTCAGTGGTGTATGTTAG MSDPPGVRFELDPEIERTFRNRRREQRRNQMENAPQLPQDQSIRAYAVPMFNELNPGIARPHIQAANFEMKPVMFQMLQTVGQFHGLSSEDPHLHLKSFLGVSDSFVIQRVPRDALRLTLFRILLEMEQSHVISHQQPPAMEPAAVVNQVTDEACVYCGEDHNYEFCPSNPASVLAQPPQLLMGSQGNNVQAQQKMNQPGFAKAQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEESRKTQDLNSNRNNNVVIEKELESGQGAGGSKENAGASGSVPDVEAPYVPPPPYVPPLPFPQRQKPKNRMCDYQEWSTPKAKDPGSFTIPVSIGGKELGRALCDLGASINLMPLSVYRKLGIGEASPTIVTLQLADRSITYPEGKIEDVLVKVDKFIFPVDFIILDYEADKDVPIILGRPFLATGRALIDVQKGELTMRVCNEEVKFNVFKAMKYPDEMEDCSFIRILESTVIETAIQDSADKHSEKHGEQYRKAIGWTLADIQGISLSFCMHKITLEEGSFRSIEQQRRLNPAMKEVVKKEVIKWLDVGIIYPIADSNWVSPVQCVPKKGGVTVVSNKDNELIPTRTVTGWRVCMDYRRLNKATRKDHFPLPFIDKMLDRLAGQAYYCFLDGYSGYNQITIAPEDREKTTFTCPYGTFAFRRMPFGLLAFAMLQQHFSGVC Homology
BLAST of Lag0015918 vs. NCBI nr
Match: PIN12235.1 (DNA-directed DNA polymerase [Handroanthus impetiginosus]) HSP 1 Score: 540.0 bits (1390), Expect = 2.9e-149 Identity = 322/649 (49.61%), Postives = 389/649 (59.94%), Query Frame = 0
BLAST of Lag0015918 vs. NCBI nr
Match: XP_023522102.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111785979 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 539.7 bits (1389), Expect = 3.8e-149 Identity = 318/692 (45.95%), Postives = 394/692 (56.94%), Query Frame = 0
BLAST of Lag0015918 vs. NCBI nr
Match: PIN22487.1 (DNA-directed DNA polymerase [Handroanthus impetiginosus]) HSP 1 Score: 537.0 bits (1382), Expect = 2.5e-148 Identity = 333/731 (45.55%), Postives = 395/731 (54.04%), Query Frame = 0
BLAST of Lag0015918 vs. NCBI nr
Match: PIN22518.1 (DNA-directed DNA polymerase [Handroanthus impetiginosus]) HSP 1 Score: 534.3 bits (1375), Expect = 1.6e-147 Identity = 306/617 (49.59%), Postives = 364/617 (59.00%), Query Frame = 0
BLAST of Lag0015918 vs. NCBI nr
Match: PIN00194.1 (DNA-directed DNA polymerase [Handroanthus impetiginosus]) HSP 1 Score: 531.6 bits (1368), Expect = 1.0e-146 Identity = 318/649 (49.00%), Postives = 387/649 (59.63%), Query Frame = 0
BLAST of Lag0015918 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3) HSP 1 Score: 103.2 bits (256), Expect = 1.2e-20 Identity = 74/215 (34.42%), Postives = 104/215 (48.37%), Query Frame = 0
BLAST of Lag0015918 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2) HSP 1 Score: 103.2 bits (256), Expect = 1.2e-20 Identity = 74/215 (34.42%), Postives = 104/215 (48.37%), Query Frame = 0
BLAST of Lag0015918 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 2.3e-16 Identity = 85/341 (24.93%), Postives = 153/341 (44.87%), Query Frame = 0
BLAST of Lag0015918 vs. ExPASy Swiss-Prot
Match: P10394 (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 9.7e-15 Identity = 47/132 (35.61%), Postives = 71/132 (53.79%), Query Frame = 0
BLAST of Lag0015918 vs. ExPASy Swiss-Prot
Match: P31843 (RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 4.8e-14 Identity = 38/76 (50.00%), Postives = 49/76 (64.47%), Query Frame = 0
BLAST of Lag0015918 vs. ExPASy TrEMBL
Match: A0A2G9H400 (Reverse transcriptase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_15163 PE=4 SV=1) HSP 1 Score: 540.0 bits (1390), Expect = 1.4e-149 Identity = 322/649 (49.61%), Postives = 389/649 (59.94%), Query Frame = 0
BLAST of Lag0015918 vs. ExPASy TrEMBL
Match: A0A2G9HYA0 (Reverse transcriptase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04802 PE=4 SV=1) HSP 1 Score: 537.0 bits (1382), Expect = 1.2e-148 Identity = 333/731 (45.55%), Postives = 395/731 (54.04%), Query Frame = 0
BLAST of Lag0015918 vs. ExPASy TrEMBL
Match: A0A2G9HYD8 (Reverse transcriptase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04775 PE=4 SV=1) HSP 1 Score: 534.3 bits (1375), Expect = 7.7e-148 Identity = 306/617 (49.59%), Postives = 364/617 (59.00%), Query Frame = 0
BLAST of Lag0015918 vs. ExPASy TrEMBL
Match: A0A2G9G4F1 (DNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_27304 PE=4 SV=1) HSP 1 Score: 531.6 bits (1368), Expect = 5.0e-147 Identity = 318/649 (49.00%), Postives = 387/649 (59.63%), Query Frame = 0
BLAST of Lag0015918 vs. ExPASy TrEMBL
Match: A0A2G9HH15 (Reverse transcriptase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10756 PE=4 SV=1) HSP 1 Score: 529.3 bits (1362), Expect = 2.5e-146 Identity = 321/688 (46.66%), Postives = 382/688 (55.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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