Lag0015805 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0015805
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr12: 24921404 .. 24924790 (-)
RNA-Seq ExpressionLag0015805
SyntenyLag0015805
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAAGTTCTAGAGGCAAAGGGAAAGCGATTCCAATTTCCGAAGATCATGAAGATCACAAAAGTGATTCAAATTCAAAACTATCAAACACCACCAATCAAGAACTATCTATAGCAAAGATAGAAGATAAACTCCATCAATGGAATATTCCAAAGGTAGATCCCAAAACAATCTACTACCATAGTACTTTCAATTTTACTAAAAAAAATTGTATCAAGATTTCAGAAAAGAATATTCCAATCAACAATGATCGTGAAACAATAAATCTTTTTTCAAAAAAGCTTATCCTTCATCACCGTGAAGAATTTAATTATCTTCACATAGGATTAGTTCAAATAGCCATTAAACCCTTATTCAAACTCGGGTTAGATATTCCAGTCCTTGTTTCTTTAAGAGATAAAAGACATCTAAATTTTTCAAACTCCTTATTAGGAATCGTTCAATCCAATCTTGAAGGAGGACCTATCTTCTTCAATTGTTATCCAAATTTTACCCTCTCTTTGAAAGATCCAAACATCCTATCTTCTTCAATAGCCGATGTTTATACTCAAAATCTTAATATACAGGATCAAACTCATTCTGCTGTAATGATTTTAGAATCTATAACAAGTTGATGAATACAAATATCTCTCCTAGAGCTTTAAGATCTTCTCCAAAAGGATCCACCGTCCTTTTAGAAGCAAATCTAGAGAGATCATCAGTCACTGTTCCAAAAGTCTATCATGGGAACAGATCACCAGAAACCCAACGTGGAGGCTCACAGAAGCTTTCACTCCTCCAAAAAAGAATTCAAACCTTGCTCAAATTATCGAACATCCAGATGGATCAGTAGAAGTTCAATTTTCTGAAGAACCAAACAGGTCAAAGGTCAAAGACTTCATGTCTTCACGACCTAGTACTTCCGGATCAACTTCAGAAGATGGATCAAAATTCTATATGAATAGATCTAACTCGTTAAGAGTAAAATCTGTAAATATAGAACAAAATGTAGCAAATGTTCAATACGAGGATCAACCTCAATCACCAACTCAAACAGACATGGATAATAGATCTGTGTTTGAAAGTCAATTGAATGTCCTTATTCAAGAATTTTCAATCGATAAAGAAACCTTAAAAAAAGACTTTCTTTCCTACAAAAATAATGCAAAAGAAAAGCCTTTTTCAAAAACTATGATAAAGACCAAAGATCTGAGATAAGATCAAAATGGTATTCATTCATGGAAGAAACCGAACGAAATATTCCATTTTTTACTTGGATGAAAGAATCCGAAAATGAAATCAATATGCTTCAAGAATCGTGGAAAACTATTCAAAGAGGGAGTATACACTCTACTCATCCTCCCTTAGAGGAGATTAAATTTGAAACAATTTACGGGGAAAAGGTCAAAGCTAGCCCATTCAAAAATATTAGTGAAAAGGACGAGAAGAACGTTCCTACTCTTAAGGATATATAAAATATCCAGCTTCAAAACAATTTTTCCAATAAAATCCTTTCTACTATAGCTAACCAAGTAGAAAAGATTGAAGGGAAAATATCAAAGCCTTCAATTACTTCGTCATCAAACAGAGAAATCTTTATACCTCCCATTGATGAGTCAATTCCATTATTTAAACCTACGGTGATCAACAGCAAGATTAAAATAATGTATAAAGAAGAAGAAACTCTAGCTTTAATTGAAGAAAAGCTAAGTAGTCTTCATATCTCAAAACCATCAACTTCAAAATCAACCCCTACAATCAACGTCCTAAATGATTCTGTTATTGATCAAATTATTCAAAAAACAAGAAATATTTCCTTAGAGGAAGAACCGATTGAATTACCAAAAAAAGTCCTAAAAATAGGAACAAGATCAAAAGCGTCAAAACAAGTATTAATGCGAAACTGGTATCCACAACCTTCTTTTCCAGATGTCCAATTCGAAGAAAAACACAAGTGACTCAAGCCGTTATGACGATTAGCCATCCATGAATGGAATATAGATGGCATATCCGATTATCTTATCCTCAATGTGCTCAATGAAATGTTCATGGCCTCAAACGCTTACCGACAAAGAGGCAAAAAAGATCACGAAATAGCCCAACTACTTGTTGCAGGATTTACAGGGCAATTGAAACAATGGTGGGATCAATATCTGACAGATTATGATCGTCAGTATATTTTAACCCACACAACTATTGAAAAGAAAAAACAGACAATCAAACTCGAGGGTCAATTACCTCAAACTGTTGAAAGAGAAGAAAGTATAGAAGACGCTGTCAATACCCTCGTATATACCCTTACAAATGCCTTTGTAGGCGATCCAACTCAATATCACGCCAGATCGGCTGATATCCTTTTAAACCTCAAATGTCCAACACTAGGAGATTTTAGATGGTACAAAGATATGTTTTTAAGCAAAGTCCTTATTAGAGTTGATTGCTCTTCTTCAATCTGGAAGGAACAATTCATTAAGGGTCTTCCCAGTTAAAATACGACGGAAAAATTCCATGGGACACCCTAACCTATGGGAATCTAACTTCCTTTATAATAGGTGAAGGTCTTCGTCTCTGCAATGAGTCAAAAGTTCAATAAAAACTTAGCAAATCCTTCGGGTCAAGACGAGCTGAGTTAGGAATTTTTTGCGATCAATATGGATGTGGAAAAATTCGTCGCCATCCATAATCAGAAAATCTTCTATCAAAAGATATCGAAAATATCAAGAACGACAAAACTATAAAACGTATAGCAATTTCAAAGAAAGAATTATAGAAAGCCGTATAATTCTTACAATAAAAAACGACCCTTCTACAAAGGAGGAAGCTCCAAAAGAAACGTCCAATGTTACAAATGTAGATCAAATGGACATTATGCCAATAAATGTCCAATGAAAAAGAAGATCAATGAATTAGAAATTGATAATGATACAAAGCAACAGCTTTTGAGTATCATTCAATCTGATTCAGAAGAGTCAATAATTTATAGTTCGGATGAAGGTCAAATTCTTGAATTACAAGAAGAAACAGATTCGTATTCTAGTAGTGATTATAATGACGAAGAATACGATGGCAAACGAGTCTGCTCAGGATGCATATGTGTCTTGACGAAAGACCAAGAAACTCTACTCGATGTTGTTGACAAGATAGACAACGTCGAACTCCAAAAGTCAATCTTACATAGCTTAAAAAACTCAATTCTTGAAAATAGAGATCAAGAAGAACAGAGTAACTTTCAACCTTATGAATGGAAGAATGTTTTCAAAAAATTTGAAGAACCAAAACCAGTTACCATTCAAGATCTTCAAGCTGAGATTAATATTCTAAAAGAGAAGTCTCAGAACTCAAAAGAAATACTGATCAAGAAATTTTTCATCTCCTTCAAGAAATATCTCAAATCAAAACCGAAGTAG

mRNA sequence

ATGTTAAGTTCTAGAGGCAAAGGGAAAGCGATTCCAATTTCCGAAGATCATGAAGATCACAAAAGTGATTCAAATTCAAAACTATCAAACACCACCAATCAAGAACTATCTATAGCAAAGATAGAAGATAAACTCCATCAATGGAATATTCCAAAGATCACCAGAAACCCAACGTGGAGGCTCACAGAAGCTTTCACTCCTCCAAAAAAGAATTCAAACCTTGCTCAAATTATCGAACATCCAGATGGATCAGTAGAAGTTCAATTTTCTGAAGAACCAAACAGATCAAATGGACATTATGCCAATAAATGTCCAATGAAAAAGAAGATCAATGAATTAGAAATTGATAATGATACAAAGCAACAGCTTTTGAGTATCATTCAATCTGATTCAGAAGAGTCAATAATTTATAGTTCGGATGAAGGTCAAATTCTTGAATTACAAGAAGAAACAGATTCGTATTCTAGTAGTGATTATAATGACGAAGAATACGATGGCAAACGAGTCTGCTCAGGATGCATATGTGTCTTGACGAAAGACCAAGAAACTCTACTCGATGTTGTTGACAAGATAGACAACGTCGAACTCCAAAAGTCAATCTTACATAGCTTAAAAAACTCAATTCTTGAAAATAGAGATCAAGAAGAACAGAGTAACTTTCAACCTTATGAATGGAAGAATGTTTTCAAAAAATTTGAAGAACCAAAACCAGTTACCATTCAAGATCTTCAAGCTGAGATTAATATTCTAAAAGAGAAGTCTCAGAACTCAAAAGAAATACTGATCAAGAAATTTTTCATCTCCTTCAAGAAATATCTCAAATCAAAACCGAAGTAG

Coding sequence (CDS)

ATGTTAAGTTCTAGAGGCAAAGGGAAAGCGATTCCAATTTCCGAAGATCATGAAGATCACAAAAGTGATTCAAATTCAAAACTATCAAACACCACCAATCAAGAACTATCTATAGCAAAGATAGAAGATAAACTCCATCAATGGAATATTCCAAAGATCACCAGAAACCCAACGTGGAGGCTCACAGAAGCTTTCACTCCTCCAAAAAAGAATTCAAACCTTGCTCAAATTATCGAACATCCAGATGGATCAGTAGAAGTTCAATTTTCTGAAGAACCAAACAGATCAAATGGACATTATGCCAATAAATGTCCAATGAAAAAGAAGATCAATGAATTAGAAATTGATAATGATACAAAGCAACAGCTTTTGAGTATCATTCAATCTGATTCAGAAGAGTCAATAATTTATAGTTCGGATGAAGGTCAAATTCTTGAATTACAAGAAGAAACAGATTCGTATTCTAGTAGTGATTATAATGACGAAGAATACGATGGCAAACGAGTCTGCTCAGGATGCATATGTGTCTTGACGAAAGACCAAGAAACTCTACTCGATGTTGTTGACAAGATAGACAACGTCGAACTCCAAAAGTCAATCTTACATAGCTTAAAAAACTCAATTCTTGAAAATAGAGATCAAGAAGAACAGAGTAACTTTCAACCTTATGAATGGAAGAATGTTTTCAAAAAATTTGAAGAACCAAAACCAGTTACCATTCAAGATCTTCAAGCTGAGATTAATATTCTAAAAGAGAAGTCTCAGAACTCAAAAGAAATACTGATCAAGAAATTTTTCATCTCCTTCAAGAAATATCTCAAATCAAAACCGAAGTAG

Protein sequence

MLSSRGKGKAIPISEDHEDHKSDSNSKLSNTTNQELSIAKIEDKLHQWNIPKITRNPTWRLTEAFTPPKKNSNLAQIIEHPDGSVEVQFSEEPNRSNGHYANKCPMKKKINELEIDNDTKQQLLSIIQSDSEESIIYSSDEGQILELQEETDSYSSSDYNDEEYDGKRVCSGCICVLTKDQETLLDVVDKIDNVELQKSILHSLKNSILENRDQEEQSNFQPYEWKNVFKKFEEPKPVTIQDLQAEINILKEKSQNSKEILIKKFFISFKKYLKSKPK
Homology
[Close]
BLAST of Lag0015805 vs. NCBI nr
Match: XP_022933039.1 (uncharacterized protein LOC111439730 [Cucurbita moschata])

HSP 1 Score: 119.8 bits (299), Expect = 3.8e-23
Identity = 66/129 (51.16%), Postives = 92/129 (71.32%), Query Frame = 0 

Query: 95  RSNGHYANKCPMKKKINELEIDNDTKQQLLSIIQSDSEESIIYSSDEGQILELQEETDSY 154
           R  GHYANKCP++ KINEL+ID + K QLL +  +DSE+     S EG+ILELQEE+DSY
Sbjct: 176 REEGHYANKCPIRGKINELDIDQELKNQLLPLTLTDSEQ-----SSEGEILELQEESDSY 235

Query: 155 SSSDYNDEEYDGKRVCSGCICVLTKDQETLLDVVDKIDNVELQKSILHSLKNSILENRDQ 214
           SS++Y  E+ +GKR C GCI VLTKDQE LL+VV+K+ + E+Q+ I   L++++  ++  
Sbjct: 236 SSTEYESEQ-EGKRTCEGCINVLTKDQEILLEVVEKVQDPEIQQKIAQRLRDAMTISKPP 295

Query: 215 EEQSNFQPY 224
           E +    PY
Sbjct: 296 EREER-NPY 297

[Close]
BLAST of Lag0015805 vs. NCBI nr
Match: XP_023521035.1 (uncharacterized protein LOC111784623 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 106.7 bits (265), Expect = 3.3e-19
Identity = 62/113 (54.87%), Postives = 81/113 (71.68%), Query Frame = 0 

Query: 95  RSNGHYANKCPMKKKINELEIDNDTKQQLLSIIQSDSEESIIYSSDEGQILELQEETDSY 154
           R  GHYAN+CP++ KINEL+ID + K QLL +  +DSE+     S EG+ILELQEE+DSY
Sbjct: 258 REEGHYANECPIRGKINELDIDQELKNQLLRLALTDSEQ-----SSEGEILELQEESDSY 317

Query: 155 SSSDYNDEEYDGKRVCSGCICVLTKDQETLLDVVDKIDNVELQKSILHSLKNS 208
           SS++Y   + +GKR C GCI VLTKDQE LL+VV+K    ++QK    SL +S
Sbjct: 318 SSTEYESGQ-EGKRTCEGCINVLTKDQEILLEVVEKF---KIQKFNRKSLNDS 361

[Close]
BLAST of Lag0015805 vs. NCBI nr
Match: XP_023520850.1 (uncharacterized protein LOC111784362 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-18
Identity = 58/103 (56.31%), Postives = 76/103 (73.79%), Query Frame = 0 

Query: 95  RSNGHYANKCPMKKKINELEIDNDTKQQLLSIIQSDSEESIIYSSDEGQILELQEETDSY 154
           R  GHYA KCP+K KINEL+ID + K QLL +  ++SE+     S EG+IL+LQEE+DS 
Sbjct: 606 RVEGHYAKKCPIKGKINELDIDQELKNQLLRLTLTNSEQ-----SGEGEILKLQEESDSN 665

Query: 155 SSSDYNDEEYDGKRVCSGCICVLTKDQETLLDVVDKIDNVELQ 198
           SS+ Y  E+ +GKR C GCI VLTKDQE LL+VV+K+ + E+Q
Sbjct: 666 SSTKYESEQ-EGKRTCEGCINVLTKDQEILLEVVEKVQDQEIQ 702

[Close]
BLAST of Lag0015805 vs. NCBI nr
Match: KAA0050625.1 (Enzymatic polyprotein [Cucumis melo var. makuwa] >TYK07815.1 Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 99.4 bits (246), Expect = 5.3e-17
Identity = 69/170 (40.59%), Postives = 103/170 (60.59%), Query Frame = 0 

Query: 98  GHYANKCPMKKKINELEIDNDTKQQLLSIIQSD---SEESIIYSSDEGQILE-LQEETDS 157
           GHYAN+CP+ KKIN++EID D KQ LL +++++   SEE    S  E  +L  L EE+  
Sbjct: 253 GHYANRCPVVKKINQMEIDEDEKQSLLKVVKAEELSSEEKEFSSEKEEDLLNVLLEESSE 312

Query: 158 YSSSDYNDEEYDGKRVCSGCICVLTKDQETLLDVVDKIDNVELQKSILHSLKNSILENRD 217
             SS  N+ + +    CSGCI VLT  Q+ LLD+++++D+  ++K+IL  L+   LE  D
Sbjct: 313 EPSSSKNETDIEEVISCSGCIDVLTSTQKCLLDIIEEVDDEAIRKNILLRLRED-LETPD 372

Query: 218 Q--EEQSNFQPYEWKNVFKKFEEPKPVTIQDLQAEINILK-EKSQNSKEI 261
           Q  ++  NF      N+  K E   PV + DLQ EI +LK E ++N ++I
Sbjct: 373 QKFKDPMNFSFQNVMNLLSK-EHAAPVKVTDLQHEIKVLKMEVNENKQQI 420

[Close]
BLAST of Lag0015805 vs. NCBI nr
Match: TYK28079.1 (hypothetical protein E5676_scaffold384G003430 [Cucumis melo var. makuwa])

HSP 1 Score: 97.1 bits (240), Expect = 2.6e-16
Identity = 73/182 (40.11%), Postives = 104/182 (57.14%), Query Frame = 0 

Query: 98  GHYANKCPMKKKINELEIDNDTKQQLLSIIQSDSE--ESIIYSSDEGQILELQEETDS-- 157
           GHYAN+CP+K KIN + ID +TKQ LL  I+SD +       SS+E  I  LQEE  S  
Sbjct: 98  GHYANRCPLKDKINAMTIDEETKQSLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSE 157

Query: 158 ---YSSSDYNDEE--------YDGKRVCSGCICVLTKDQETLLDVVDKIDNVELQKSILH 217
              YS SD +D+E          GK  CSG I V+TKDQETL D++++I + E +++ L 
Sbjct: 158 EEFYSQSDSSDDEGAIPCTGRCAGK--CSGHINVITKDQETLFDLIEQIPDEEAKRTCLL 217

Query: 218 SLKNSILENRDQEEQSNFQPYEWKNVFK--KFEEPKPVTIQDLQAEINILKEKSQNSKEI 263
            LK S+ E   Q+   N   Y ++++    K E   P+ ++DL  E+ ILK +   +K+ 
Sbjct: 218 KLKQSLEEQVPQKTIQNPIMYSYQDILNRVKGEAKIPIQVEDLHHEVKILKREVAENKQR 277

[Close]
BLAST of Lag0015805 vs. ExPASy TrEMBL
Match: A0A6J1EYM2 (uncharacterized protein LOC111439730 OS=Cucurbita moschata OX=3662 GN=LOC111439730 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.8e-23
Identity = 66/129 (51.16%), Postives = 92/129 (71.32%), Query Frame = 0 

Query: 95  RSNGHYANKCPMKKKINELEIDNDTKQQLLSIIQSDSEESIIYSSDEGQILELQEETDSY 154
           R  GHYANKCP++ KINEL+ID + K QLL +  +DSE+     S EG+ILELQEE+DSY
Sbjct: 176 REEGHYANKCPIRGKINELDIDQELKNQLLPLTLTDSEQ-----SSEGEILELQEESDSY 235

Query: 155 SSSDYNDEEYDGKRVCSGCICVLTKDQETLLDVVDKIDNVELQKSILHSLKNSILENRDQ 214
           SS++Y  E+ +GKR C GCI VLTKDQE LL+VV+K+ + E+Q+ I   L++++  ++  
Sbjct: 236 SSTEYESEQ-EGKRTCEGCINVLTKDQEILLEVVEKVQDPEIQQKIAQRLRDAMTISKPP 295

Query: 215 EEQSNFQPY 224
           E +    PY
Sbjct: 296 EREER-NPY 297

[Close]
BLAST of Lag0015805 vs. ExPASy TrEMBL
Match: A0A5A7UAJ7 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G001100 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.6e-17
Identity = 69/170 (40.59%), Postives = 103/170 (60.59%), Query Frame = 0 

Query: 98  GHYANKCPMKKKINELEIDNDTKQQLLSIIQSD---SEESIIYSSDEGQILE-LQEETDS 157
           GHYAN+CP+ KKIN++EID D KQ LL +++++   SEE    S  E  +L  L EE+  
Sbjct: 253 GHYANRCPVVKKINQMEIDEDEKQSLLKVVKAEELSSEEKEFSSEKEEDLLNVLLEESSE 312

Query: 158 YSSSDYNDEEYDGKRVCSGCICVLTKDQETLLDVVDKIDNVELQKSILHSLKNSILENRD 217
             SS  N+ + +    CSGCI VLT  Q+ LLD+++++D+  ++K+IL  L+   LE  D
Sbjct: 313 EPSSSKNETDIEEVISCSGCIDVLTSTQKCLLDIIEEVDDEAIRKNILLRLRED-LETPD 372

Query: 218 Q--EEQSNFQPYEWKNVFKKFEEPKPVTIQDLQAEINILK-EKSQNSKEI 261
           Q  ++  NF      N+  K E   PV + DLQ EI +LK E ++N ++I
Sbjct: 373 QKFKDPMNFSFQNVMNLLSK-EHAAPVKVTDLQHEIKVLKMEVNENKQQI 420

[Close]
BLAST of Lag0015805 vs. ExPASy TrEMBL
Match: A0A5D3DXC4 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003430 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.3e-16
Identity = 73/182 (40.11%), Postives = 104/182 (57.14%), Query Frame = 0 

Query: 98  GHYANKCPMKKKINELEIDNDTKQQLLSIIQSDSE--ESIIYSSDEGQILELQEETDS-- 157
           GHYAN+CP+K KIN + ID +TKQ LL  I+SD +       SS+E  I  LQEE  S  
Sbjct: 98  GHYANRCPLKDKINAMTIDEETKQSLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSE 157

Query: 158 ---YSSSDYNDEE--------YDGKRVCSGCICVLTKDQETLLDVVDKIDNVELQKSILH 217
              YS SD +D+E          GK  CSG I V+TKDQETL D++++I + E +++ L 
Sbjct: 158 EEFYSQSDSSDDEGAIPCTGRCAGK--CSGHINVITKDQETLFDLIEQIPDEEAKRTCLL 217

Query: 218 SLKNSILENRDQEEQSNFQPYEWKNVFK--KFEEPKPVTIQDLQAEINILKEKSQNSKEI 263
            LK S+ E   Q+   N   Y ++++    K E   P+ ++DL  E+ ILK +   +K+ 
Sbjct: 218 KLKQSLEEQVPQKTIQNPIMYSYQDILNRVKGEAKIPIQVEDLHHEVKILKREVAENKQR 277

[Close]
BLAST of Lag0015805 vs. ExPASy TrEMBL
Match: A0A5D3BEY3 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold690G00300 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.7e-16
Identity = 72/182 (39.56%), Postives = 103/182 (56.59%), Query Frame = 0 

Query: 98   GHYANKCPMKKKINELEIDNDTKQQLLSIIQSDSE--ESIIYSSDEGQILELQEETDS-- 157
            GHYAN+CP+K KIN + ID +TKQ LL  I+SD +       SS+E  I  LQEE  S  
Sbjct: 936  GHYANRCPLKDKINAMTIDEETKQSLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSE 995

Query: 158  ---YSSSDYNDEE--------YDGKRVCSGCICVLTKDQETLLDVVDKIDNVELQKSILH 217
               YS SD +D+E          GK  CSG I V+TKDQETL D++++I + E +++ L 
Sbjct: 996  EEFYSQSDSSDDEGAIPCTGRCAGK--CSGHINVITKDQETLFDLIEQIPDEEAKRTCLL 1055

Query: 218  SLKNSILENRDQEEQSNFQPYEWKNVFK--KFEEPKPVTIQDLQAEINILKEKSQNSKEI 263
             LK S+ E   Q+   N   Y ++++    K E   P+ ++DL  E+  LK +   +K+ 
Sbjct: 1056 KLKQSLEEQAPQKAIQNPIMYSYQDILNRVKGEAKMPIQVEDLHHEVKTLKREVAENKQR 1115

[Close]
BLAST of Lag0015805 vs. ExPASy TrEMBL
Match: A0A5A7UX67 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001460 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.7e-16
Identity = 72/182 (39.56%), Postives = 103/182 (56.59%), Query Frame = 0 

Query: 98  GHYANKCPMKKKINELEIDNDTKQQLLSIIQSDSE--ESIIYSSDEGQILELQEETDS-- 157
           GHYAN+CP+K KIN + ID +TKQ LL  I+SD +       SS+E  I  LQEE  S  
Sbjct: 676 GHYANRCPLKDKINAMTIDEETKQSLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSE 735

Query: 158 ---YSSSDYNDEE--------YDGKRVCSGCICVLTKDQETLLDVVDKIDNVELQKSILH 217
              YS SD +D+E          GK  CSG I V+TKDQETL D++++I + E +++ L 
Sbjct: 736 EEFYSQSDSSDDEGAIPCTGRCAGK--CSGHINVITKDQETLFDLIEQIPDEEAKRTCLL 795

Query: 218 SLKNSILENRDQEEQSNFQPYEWKNVFK--KFEEPKPVTIQDLQAEINILKEKSQNSKEI 263
            LK S+ E   Q+   N   Y ++++    K E   P+ ++DL  E+  LK +   +K+ 
Sbjct: 796 KLKQSLEEQAPQKAIQNPIMYSYQDILNRVKGEAKMPIQVEDLHHEVKTLKREVAENKQR 855

The following BLAST results are available for this feature:
BLAST of Lag0015805 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022933039.13.8e-2351.16uncharacterized protein LOC111439730 [Cucurbita moschata][more]
XP_023521035.13.3e-1954.87uncharacterized protein LOC111784623 [Cucurbita pepo subsp. pepo][more]
XP_023520850.11.3e-1856.31uncharacterized protein LOC111784362 [Cucurbita pepo subsp. pepo][more]
KAA0050625.15.3e-1740.59Enzymatic polyprotein [Cucumis melo var. makuwa] >TYK07815.1 Enzymatic polyprote... [more]
TYK28079.12.6e-1640.11hypothetical protein E5676_scaffold384G003430 [Cucumis melo var. makuwa][more]
BLAST of Lag0015805 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0015805 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EYM21.8e-2351.16uncharacterized protein LOC111439730 OS=Cucurbita moschata OX=3662 GN=LOC1114397... [more]
A0A5A7UAJ72.6e-1740.59Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold17... [more]
A0A5D3DXC41.3e-1640.11CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A5D3BEY31.7e-1639.56Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold69... [more]
A0A5A7UX671.7e-1639.56Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43... [more]
BLAST of Lag0015805 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 240..260
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0015805.1Lag0015805.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding