Lag0015796 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0015796
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Locationchr12: 24415641 .. 24423931 (+)
RNA-Seq ExpressionLag0015796
SyntenyLag0015796
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCACCCCTGTAGCTTCTCCGAATATCACTCCCAACACTATTCCAGTAGTCACACCGATACACCAACCGATTAATCCTCTTGTCCAGCCTCCAAATCAGCCTCTGAATTCGAATACCCCAACACAAAACCATTCAACACTTCGACCGCAGCCACCAATATCGCAACCCCAGCCTCCATTCGTTCCTCAATCTCAACCTCAAGTATTTTATCCTCAAACTTTTGCCCACCCCTTTTATCCCACCTCTGTTCTACGCCCTCAATCAACTCCAGCATTTTTCCAAATCCAATCCCATATTAGCAACCGTTTGCTCCAGCAACCTATCTTCAACATCAGAACCAAAACCCCCAACCCCCTTATCCCCAACCTCCGGCATTCCCAAATATCCTTTCCCCGAATCCATACCTGACCCTCCCACAACCCCTGTTTGTCAAGCTTAACCATACTGATTTTCTCCTCTAGAAGAATCAACTCCTGAATGCTGTGTTAGCAAATGGCTTGAGTGGTTATCTTGATGGCTCCATCCCTGCGCCTGCAAAGTTTCTTGATGATCAACAACTTAATATGGCCCAAGCAAACCTTAGTAGTCTTCACATTAATAATAGCTATCGTCCTACCTCTCGGCCCTTCAATTCAACTCCTAGAACTCCCTTCAATCGACCTAATTTCCAAGCCTTTTCTATTCCACCAGCCCCTGTTTCTCCAAGTCTCTAAGGTAAACCTCAGTCTCAACGTATACAAAAATGGCCTCCTAGATCCTCTTCGAAAAAACCAGAACGCCAAAAATGTGGTAAATTCGGTCATACCGCTCTGATTTGTCATCATAGGACTAACTTAGCTTACCAAACTCGTCCACCCCAAGCTTTGTTAACCACTGCAGCCCCCACACATTCTCCGTCTCCTACACCTGACTCGTTGTCCACTATGTCCGTTGAATCTTATCATCCAGATGAAAATTGGTTCCTTGATTCTGGAGCTACTCATCATATGACTCCTGAAGCCTCCTCTCTTTATACATCGATGCCTTTCAATGGTGGTGAGCAAGTCACAGTTGGTAATGGTAAGAAAATTCCTATCTCTAGCATTGGAACTTCTTTTATTCATAGTTCTCAAAAACCTATTTTTCTTGACTTTATCCTATATACTCCAACTATTTCAAAGAAGCTTATTAGTGTTGCTCGACTCTGCAAAGATAACAAAACATTTGTTGAGTTTTGCTATTTTTTTATTTCTTGTGAAGGATCTTCAATCCAAACAAGTTCTCACTACTACAAATTTGACCTTTATTGACGCTTGGCTTTTTACATTTATTGACGTTTGTGTAAAAAAAACGTCAATAAACGTAATTTTTGTACTTTAAAATAAATTATTAATAATTAAATAGATATATTAACGGTTTTATGGTATCAAGAAATGATATGGGTTATGTTCACGACCAAAAAGTGTCAATAAATGTGCTTAAAAGCGTAATTTACGTAGATTTTCATCCAACTTCGCCTTTTCACATAGTTGACGGACAAAAAACATCAATAAAAGGGTTTTGTTGACGGTTTTTATTGACACTTATTAGCCGTCAATAAAAACCGCATTCATTGATGGCTAATAAGCGTCAATAAACATTACTATATTGACACGTAATAAACGTCAATATTAATGAGGGTTTCTTGACGGGTATTAAACGTCAAAAACTTTATCTTTTTATGGAATTTTGGATTTAAGTTTAAATTGCTCTCAAATTTGAAGTGATTTTAGGAGTTTAAATTTGGTTTTTAATTAGAAAAGAGATAAAGTTGGAAAAAAAACCTAAGACTCTTGTTTGTGTGTTTTTTTTTTTTATTTGAGTGGATTAAGAAAAATAAAAGAAAAAGAAAAATAAGAAAAAGAAAAAAAACCCTAAGACTCTCCTCATTCTCTCCCATTCCTTCTCCATGCTCCCCCGTCGTCAGTTTCACACCCTCCCCTTCTCACACAATTTCAGCCTTCATCTTCTTCTCCTTACAGCAGCCAACAACCTTGCCTCCATTAGTTTCTTCTTTTTTTTTTTTTTTTTAAAATTCCAATCGCCCAAGGCCTTGCCTTCGTGGCCTTCTTCTCAGCCATGGGTCTTCCTCTCGCCGGCCACCTCCTTCGTCGACGGCGCGTCTCTCCGGTAGTAGCAGACAACGGTGACGCTTCCAGTGACAGTGGCGGTTTCTAGGTGCAAGCGGCCAGTCAGTTGCGTTTTTTTCCTTCTTTTGCGTGGGTTTTGCCTCTCATTCATCCCCTTCGGTCTTTGGTCGTTTTCAGGTGTTGTGGGTGTTTTATTTCAGGAGATTTCGGGCAAACGAAGGCTGTTTGGAGCATTTTCCGGCGACTGTTCGGTGTTGGGCGCGACTGCAGCGATTTTTGGGTCTTTTGGGGCGTTTTTCCGATGAATCCTTGCGTGGGTAAGTGAGATAAAGCATGTTTTGGTTATCTTAAGTGTATTGGAAGAGTACCCATTAGTTTTCGCCTTTGGTTAAAAGGTTTCCTTTTGCTGATAAAGGTTATCAGGTTTAATTGTAGTTTGGAGCGAATTTAGAAGCTTGGGTAGTGAGCTTTGGGGCCGATTAGGTGAGTTTTTGGGAATTAAACCTCTCCCAAAAATTTGATTATCTCCTATTGCCTTGTGACTCAAAGAGGTTTATGAGTTTGATTTATGTTCTTCCTCTTTTGTGTAGTTGGTTAGGAGCTTGGAAGCTTGGAAGTTTACTTGTTTTGTCAAGCTCCTTAATTAACTAATGTAAGTAGCTATTGGATACACTCTTCTACCTTTATACCCAAATGCTTGATTGTTGGGTTCGATCAAGTCTAGTCCCATGCTTTGAACTAATTTCCCTTGTAAATTTGGTATGCTTATAAGAGTTAGTTTAAAGCTTTTAGTTGTTTTTGGATTTAAGAGCGCTTGTTGAGTTTCATTGCGAAGCATGATACTGGTTCTCCATTATTCATTGTATCTGAGTTACTGTGTTGTTAAAAATCAGTCTCGGTTATTTTGAATCGTTATAGTTGTTAATCTTAGATAATTAGATTAACAACTTTTGCACGTATTGAAGAGAGCTTTTCCATCTTTAATGAATGAGAATGTCAGATGATTTTTACTTTTTAAATTGATAATTTCTGACCTAAGAAAACAAAATCCACCCTTGCAACCAGAAAAATCATACAAAAGAAAAAAAAATGAGAGGGGATAGAAATGATTTGAAAACAATTCTGGCCCATACTTGAAATTTCCATGACCCGTTCTTGAAAATGGATAGAATTTGATGGTTAGAATGGTTGGATGAGTGATCTTATGTTTGTCTCTCTTGGTTTTATTTTTTAGCTCTCATGCTTTTGTTTTAGTAAGAGGGAAAAACGAAAAGTATGTAACATAAAATAAAAGAGTGAAATCAAAAGAAAAAAACATCACTTATTACTGCTTCTCATGAATCGTTCACATACAAAGGGATAAAATTAAATTTTAAAATGATTTCGTACACATACAAAGGGATAAAATTAAATTTTAAAATGATTTTCGATGTTCAATATTCAGAAAAAAAAACCCCCAAAATCTTGAAGGTTGTAAAAGGGAACTCACCGCCATTTAAATAAATCTAAGAAAGTGAAAAAAGATCGTAGTCACAAATCGGAAGCCACATAAACGTTTTTGTTAAAAAATGAAACAGAAAATACCCAAACTTTATGGTAGCCCACAATCAATTACGGAGGAAGAAATTCAAATCAACCGCCTTATCAAACAAGAAACTCATCCCCATCCCGAACGACCTTAAATCGAGTTACTCATAACCCGTCGACTTGGGAACTTGGTTGTTGGGGATAATTTGAACACAAACCAGCAGAAATTTGGAGTTATTTGGTAAGTTCCAACATCTTTAAACCTTTGGAATTTGTCTAAGTTAGCTTGTGAATAGCTTAAGGCCATTGGATGCTCTTTAAAGTGTAGTTAGACCCAATTTGGATCCCTGCATATTCAAAGAGCTTTAGTGTTGGTTCACAAATTCCAACAAGCTTGTAGGCTCGTGTTTAGCATGGTCGATATGTTTCTTCACCTTTTTAGCCTTGTTAGAACTCTTGGTAGGCTCCCTAATTACTATTATTGAGTTTTATTGAGTTTGCAGAGGAGAACTCACCTTAATATGAAAGAGTTTAGTTAACGTGACAAACCAACACATAGCATATTTTATTACTGTAGAGAGATTTTTATGAGTTCTCCTTAATATCACAAATATAATTATACAAACTTACAGATAATTGTTCACATTACGAAAACTCAGCTTAGGTATCAAGAGTTCCTTTTGAGTTATATCTTTTGATTAGTGAAGATTTAGATCTGGATATCTAAAGCATCACTAAACTCCGAAAAAGTTAATATTATAAACATAACAATTTAATTACCAATAAATTACAACTGTGCCATAAATATTTTAGGTTAATGTTTTAATTTATATAGATTCACCTATTAGCCAATTGGCATCAATTAGAGCTTATGAGTTATTTTCAGCGAAAGAGCTAATTTTTTTTTGGTGAAGTATAGGATGTATCAATACTCTTTAAACCCTTTCAAGCATGTTTAAAGCATCTCCACGTTAGTTATAATCCTTTAGAAGTTATCCCTCTTGCTTATGAGCCGTATAACGTTGAATATGGAAGTTTAGTTGTTTGTTGGAGTTTGAGATATAAATTGTTTTTTTTTTTTTTTGAATGAATGCATAACTTTGGGGAGATTTTGAACATTGAATAGCTTTATTATCTTAGGTATCAAGGACGCTCTATATTTGTGACGTTTCTTTGACTTGAACGAGTTATTGCAATGTTCACAAAGAAAAAAGAATATGCTTAGTTCTATGTTTATTCTTAGTTTTGATTCTTTTCATTTAATAAAGTTATTGTTCTAGTAATTGTGTTATAAGCCTTTAACTAGTAAGTGGTGTTTCTGTTGTTTGATTGTGGCTAAATGAGAATGCGAGATCTGACTGGCTAGTTTGTGGAGGAGTTCTGTTGTGTATTAGTGGTGCTGTGGTGTGTAGTTGTGGGTTGTTTGGCTTATAGAAGTGTGTTTTATGCTTAATAGGTTAAGGAAAAAAATTTGGATTAGTCCTATGTATGTTGTTATGCTGCCGAAATTTTGGTGCATTCGGTTAGTTTGGTTTAGGAGATAGTAATGTCGCTAGGATAGTTCTACAATCCTGGGGCGTTACACTAAGTGATCAGTTTGAGTTTAGATGATTTCATTTAGTTTAGCTTTGGAGTTCTTCTATAATTTTTTTTTTTTGAATTGTTATGTTTGGTTTAGGTGTTTTGTATTTGTCTATTTTATTTATATTAAAAGAAAGTACTTGTTCATTAATTTTATTTGATTAGGTTATAGCATAATGGATAAATCATGGATGTTGAAAGATAGATTATCAAAGGAGTATGAAGACTTTTACTTATTTTATTTATATTAATAGAAAAAGTTTCACCTTCGAATGGGTATATGTTAGGTTGTTTTAATCATATTATACAAATTCTCTTTACATGTGTTGAGCTATATATGTAGTGTGCTCAACAATTGGATCTATGGAGTGTGGATACTATACTCTTCAATTTATACGAGATATTGTATCCCACAGGAGCAGAGTGATTACAAATGTGGTACTAATCAATTTAGCCTTGTATTCAACTTAACTTTATATATTTATTATAATTTTAGTAATGTAGTGTGTTTACTTTTTTTTTTTTTTTTTTCTTTATTTTTCTTTTTTTGCAGTTGACGAGAGAAACTGCATTAAGCCAATCAGAAATCAATGAGATAATAGTTGAATTATGTGAATATGTAGCACAATACATGGGATCATTGTTTGTTAATGTTATACTTCGTTTTTTTATTCGTTTTTTAGACAACTTGTTAGACACTGTGATATGTTCTTAATTTGATGAAATTAATATTATGACTTACTTAAGTTGTGTTCTTAGATAACTTTTTCGTTAATGAAATCTATTATCTCATTATGATTTCACGTTTGGTTGAAATTATGATTAATTTGATTCTATATTTCTATATGAACAATAATGTGTTCTTTACGAGATCTAACTCGTACTATATTTATACTTGAGTTTTGGTGTTACTTTCATATAATGTATTGAACATGTCATGTTATTGTCAAGTGAAGTGAAAGTTGTGTTCTGGGTTTAGAAGTGTATATTTCTATTCTTTCAGGTATCTAAAAATTTTTGGTTAGTTATAATTACGTTGTTATGTAGTTGGATTTTTGGTAAATCAAACTTGGTTACAGGGTAAAATTTAGTAACGTCCTCTATATTATGTTGAATTTTGGAGACATTACAATTGGTAGATAGCTACTATTGTGTAGATGCAGGTTGCAACGCAGAGGTAAAAACAACGTGAGGTTATTTATTTATTTTTTCTTCCAAATATGTATCGTTGACGGCTAATAAACGTCAATAAAATGATATATTGACAGTTCATAAGCGTCAATAAATATATATATTGACATTTTCGATCCTATAATTGACATTGAAAAAACGTCAACATAGGTTTCTATTGACGGTTTATAAATATCAATAAATACGACAACATTGACGCTTTATGGATATCATTGACGAATAAAACGTGTCAATTATACGATTTGTTGATGGCTAGTAAACGTCAACAAAGGTGCTTACGTTGACGCTTTATGAATATCATTGACGGATAAAACGTGTCAATAATGTCTTTGTTGATGGCTTATAAACGTCAATAACGACATCTTCGTTGACGTCCAATAAGCGTCAATGAAAACAGTAATATTGACGCTTTAGTTTTATTGACACCACTTCAGTTGACTGCCAAAAAGCGTCAATGAAGGCCATAGTTGATATTTTTAGTCGTCAACAAAGGCCAAATTTGTAGTAGTGTCTTCTCCGGGGCATCCTTGAAGATGGACTTTATAAGTTGTTGTCTCCTTCTTCGACTCCTTCAAGTGCTTGGCCCCTGCTGTCCTTGTCTTCTACTGCTGTTTTTTTATCATCTGCAGTTGTTGTCCCTGATTGGCACCATCGACTCGGGCACCCTGCTGCTGCTATTTTACACCGTGTTATGTCTTTCTGTCATGTGTCTAGTCCTAGTGTTCCAAATTTTTGTAATTCATGTCAGCTTGCTAAAAGTCATAGTCTTCCTTTTTCATTATCTCAATCTCAGCCTGTTGCACCATTTCATTTAGTACATTCAGATGTATGGGGACCTTCTCCAAAAATTTCAATTAATGGAGCACGAAATTTTCTTTTGTTTGTTGATGATTTTTCTCGCTTTTCTTGGTTGTACCTTCTTAAAACCAATGATGAAACTTTTTCTTGTTTCCTTCATTTCAAGCAACTTGTAGAAACTCAATTTGATACTAAAATTAAAAGTCTTCAAACTGATTGGGGAGGTGAGTTTCATAGAGTTTCTTCATTTTTATCATCTCATAGCATTATCCATCGTATGTCTTGCCCGTATACTTCTGAACAAAATTTTCGCTTTGAGCGTAAAAATCGCCATGTTGTTGAAGTTGGCTTAGCCTTACTTGCTCATTCCAAATTTCCGTTATCGTTTTGGAGTTATACTTTTCAAACTGTCATTTATCTTATCAATAGATTGCCTTCTTCGGTTTTAAATTTTCAAAGTCCTTATCAAATGCTATATCACAAAGCCCCTGACTATTCTTTGTTGCGAAGTTTTGGTTGTGCTTGTTTCCCGTGTTTACGGCCTTATAATTTCCATAAGCTTTTATTTCGGTCAACTGAATGTATTTTTGTCGGGTATATCTCTAAGCATAAGGGCTACTTATGTGTCGATCCTTCTTCTGGTCGTTTATATGTTTCTCGTCATGTCATTTTTAATGAGAATGTCTTTCCTTGTGCTAATTCTAATTTCATTTTTGGTTTCGTAAAGTCTAGTCCCCTTGATTCCTTCGTTTTTCATCTGCTCCTTTTCCCATTGTTCAGCAGCCCTCTGTTCCGAATCCTCCCATTCCCTTTCCTTCTGCTTCAATCTCCCCCTCTACATCATCCCAGTCTTTGTCTCTTCCCCGTGGTTTTTCTTCATTACCCGTGACTGCTCACCAATCTCCTTTGGGCTTTTCACCTGCTGCTTTTTCCCATTTCGGCTGCTACACAAAATTTGCCTTCTGCCTCTCCATCTCCCCTGTCTACTTCTCCTTGAGCCACTACCTACGCAAATCTTGTTTGCACCGTCCCCCCCCCCCCAATTCTTTACCTTCCATTCCATCACCGTCAGTTTTACCTTAG

mRNA sequence

ATGACCACCCCTGTAGCTTCTCCGAATATCACTCCCAACACTATTCCAGTAGTCACACCGATACACCAACCGATTAATCCTCTTGTCCAGCCTCCAAATCAGCCTCTGAATTCGAATACCCCAACACAAAACCATTCAACACTTCGACCGCAGCCACCAATATCGCAACCCCAGCCTCCATTCGTTCCTCAATCTCAACCTCAAAAGAATCAACTCCTGAATGCTGTGTTAGCAAATGGCTTGAGTGGTTATCTTGATGGCTCCATCCCTGCGCCTGCAAAGTTTCTTGATGATCAACAACTTAATATGGCCCAAGCAAACCTTAGTAGTCTTCACATTAATAATAGCTATCGTCCTACCTCTCGGCCCTTCAATTCAACTCCTAGAACTCCCTTCAATCGACCTAATTTCCAAGCCTTTTCTATTCCACCAGCCCCTGTTTCTCCAACTTACCAAACTCGTCCACCCCAAGCTTTGTTAACCACTGCAGCCCCCACACATTCTCCGTCTCCTACACCTGACTCGTTGTCCACTATGTCCGTTGAATCTTATCATCCAGATGAAAATTGGTTCCTTGATTCTGGAGCTACTCATCATATGACTCCTGAAGCCTCCTCTCTTTATACATCGATGCCTTTCAATGGTGGTGAGCAAGTCACAGTTGGTAATGGCCTTGCCTTCGTGGCCTTCTTCTCAGCCATGGGTCTTCCTCTCGCCGGCCACCTCCTTCGTCGACGGCGCGTCTCTCCGGTAGTAGCAGACAACGGTGACGCTTCCAGTGACAGTGGCGGAGATTTCGGGCAAACGAAGGCTGTTTGGAGCATTTTCCGGCGACTGTTCGGTGTTGGGCGCGACTGCAGCGATTTTTGGGTCTTTTGGGGCGTTTTTCCGATGAATCCTTGCGTGGATGGACTTTATAAGTTGTTGTCTCCTTCTTCGACTCCTTCAAGTGCTTGGCCCCTGCTGTCCTTGTCTTCTACTGCTGTTTTTTTATCATCTGCAGTTGTTGTCCCTGATTGGCACCATCGACTCGGGCACCCTGCTGCTGCTATTTTACACCGTGTTATGTCTTTCTGTCATGTGTCTAGTCCTAGTGTTCCAAATTTTTGTAATTCATGTCAGCTTGCTAAAAGTCATAGTCTTCCTTTTTCATTATCTCAATCTCAGCCTGTTGCACCATTTCATTTAGTACATTCAGATCAGCCCTCTGTTCCGAATCCTCCCATTCCCTTTCCTTCTGCTTCAATCTCCCCCTCTACATCATCCCAGTCTTTGTCTCTTCCCCGTGGTTTTTCTTCATTACCCGTGACTGCTCACCAATCTCCTTTGGGCTTTTCACCTGCTGCTTTTTCCCATTTCGGCTGCTACACAAAATTTGCCTTCTGCCTCTCCATCTCCCCTGTCTACTTCTCCTTGAGCCACTACCTACGCAAATCTTGTTTGCACCGTCCCCCCCCCCCCAATTCTTTACCTTCCATTCCATCACCGTCAGTTTTACCTTAG

Coding sequence (CDS)

ATGACCACCCCTGTAGCTTCTCCGAATATCACTCCCAACACTATTCCAGTAGTCACACCGATACACCAACCGATTAATCCTCTTGTCCAGCCTCCAAATCAGCCTCTGAATTCGAATACCCCAACACAAAACCATTCAACACTTCGACCGCAGCCACCAATATCGCAACCCCAGCCTCCATTCGTTCCTCAATCTCAACCTCAAAAGAATCAACTCCTGAATGCTGTGTTAGCAAATGGCTTGAGTGGTTATCTTGATGGCTCCATCCCTGCGCCTGCAAAGTTTCTTGATGATCAACAACTTAATATGGCCCAAGCAAACCTTAGTAGTCTTCACATTAATAATAGCTATCGTCCTACCTCTCGGCCCTTCAATTCAACTCCTAGAACTCCCTTCAATCGACCTAATTTCCAAGCCTTTTCTATTCCACCAGCCCCTGTTTCTCCAACTTACCAAACTCGTCCACCCCAAGCTTTGTTAACCACTGCAGCCCCCACACATTCTCCGTCTCCTACACCTGACTCGTTGTCCACTATGTCCGTTGAATCTTATCATCCAGATGAAAATTGGTTCCTTGATTCTGGAGCTACTCATCATATGACTCCTGAAGCCTCCTCTCTTTATACATCGATGCCTTTCAATGGTGGTGAGCAAGTCACAGTTGGTAATGGCCTTGCCTTCGTGGCCTTCTTCTCAGCCATGGGTCTTCCTCTCGCCGGCCACCTCCTTCGTCGACGGCGCGTCTCTCCGGTAGTAGCAGACAACGGTGACGCTTCCAGTGACAGTGGCGGAGATTTCGGGCAAACGAAGGCTGTTTGGAGCATTTTCCGGCGACTGTTCGGTGTTGGGCGCGACTGCAGCGATTTTTGGGTCTTTTGGGGCGTTTTTCCGATGAATCCTTGCGTGGATGGACTTTATAAGTTGTTGTCTCCTTCTTCGACTCCTTCAAGTGCTTGGCCCCTGCTGTCCTTGTCTTCTACTGCTGTTTTTTTATCATCTGCAGTTGTTGTCCCTGATTGGCACCATCGACTCGGGCACCCTGCTGCTGCTATTTTACACCGTGTTATGTCTTTCTGTCATGTGTCTAGTCCTAGTGTTCCAAATTTTTGTAATTCATGTCAGCTTGCTAAAAGTCATAGTCTTCCTTTTTCATTATCTCAATCTCAGCCTGTTGCACCATTTCATTTAGTACATTCAGATCAGCCCTCTGTTCCGAATCCTCCCATTCCCTTTCCTTCTGCTTCAATCTCCCCCTCTACATCATCCCAGTCTTTGTCTCTTCCCCGTGGTTTTTCTTCATTACCCGTGACTGCTCACCAATCTCCTTTGGGCTTTTCACCTGCTGCTTTTTCCCATTTCGGCTGCTACACAAAATTTGCCTTCTGCCTCTCCATCTCCCCTGTCTACTTCTCCTTGAGCCACTACCTACGCAAATCTTGTTTGCACCGTCCCCCCCCCCCCAATTCTTTACCTTCCATTCCATCACCGTCAGTTTTACCTTAG

Protein sequence

MTTPVASPNITPNTIPVVTPIHQPINPLVQPPNQPLNSNTPTQNHSTLRPQPPISQPQPPFVPQSQPQKNQLLNAVLANGLSGYLDGSIPAPAKFLDDQQLNMAQANLSSLHINNSYRPTSRPFNSTPRTPFNRPNFQAFSIPPAPVSPTYQTRPPQALLTTAAPTHSPSPTPDSLSTMSVESYHPDENWFLDSGATHHMTPEASSLYTSMPFNGGEQVTVGNGLAFVAFFSAMGLPLAGHLLRRRRVSPVVADNGDASSDSGGDFGQTKAVWSIFRRLFGVGRDCSDFWVFWGVFPMNPCVDGLYKLLSPSSTPSSAWPLLSLSSTAVFLSSAVVVPDWHHRLGHPAAAILHRVMSFCHVSSPSVPNFCNSCQLAKSHSLPFSLSQSQPVAPFHLVHSDQPSVPNPPIPFPSASISPSTSSQSLSLPRGFSSLPVTAHQSPLGFSPAAFSHFGCYTKFAFCLSISPVYFSLSHYLRKSCLHRPPPPNSLPSIPSPSVLP
Homology
BLAST of Lag0015796 vs. NCBI nr
Match: RVW69807.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera])

HSP 1 Score: 119.8 bits (299), Expect = 6.8e-23
Identity = 108/335 (32.24%), Postives = 153/335 (45.67%), Query Frame = 0

Query: 98  DQQLNMAQANLSSLHINNSY-------RPTSRPFNSTPRT-----PFNRPNFQAFSIPPA 157
           DQ LN  QAN      NNS        +      N   RT     P   PN  AF+    
Sbjct: 233 DQNLNFPQANPRQPGYNNSIPQCQICGKSGHIALNGYHRTNLTYHPPVFPNAAAFN---- 292

Query: 158 PVSPTYQTRPPQALLTTAAPTHSPSPTPDSLSTMSVESYHPDENWFLDSGATHHMTPEAS 217
           P  P   + P  A+LTT+A        P  LS+ S      D +W++DSGATHH TPE  
Sbjct: 293 PNGPGQTSSPISAMLTTSA-------APTGLSSQS-----SDNSWYMDSGATHHFTPEFG 352

Query: 218 SLYTSMPFNGGEQVTVGNGLAFVAFFSAMGLPLAGHLLRRRRVSPVVADNGDASSDSGGD 277
            +  +M ++ G+   VGN          +G+   GH L    V P+  ++   + +    
Sbjct: 353 HMTDAMQYSSGDHALVGND-------KQIGISHIGHALLHSSVKPIHLNHVLHTPEI--- 412

Query: 278 FGQTKAVWSIFRRLFGVGRDCSDFWVFWGVFPM------------NPCVDGLYKLLSPSS 337
              +K + S+ R    +G D   F  F+  F +                 GLYKL  P++
Sbjct: 413 ---SKQLISVTR----LGADNKAFVEFYPTFFLVKDQQTKQLLLQGHLERGLYKLAQPTT 472

Query: 338 TPSSAWPLLSLSST--------AVFLSSAVVVPDWHHRLGHPAAAILHRVMSFCHVSSPS 397
             SS+  + S  ST          FLS    V  WH+RLGHPA  ++H+V+  C++   +
Sbjct: 473 LTSSS--VSSSPSTQFFPAPPAQAFLSQQNQVVLWHNRLGHPAPKVVHQVLQSCNLKFSN 532

Query: 398 VPNFCNSCQLAKSHSLPFSLSQSQPVAPFHLVHSD 401
             + C+SCQLAKSH LPF LS+S+ + PF LV+SD
Sbjct: 533 SEHICSSCQLAKSHRLPFVLSESRAMKPFDLVYSD 532

BLAST of Lag0015796 vs. NCBI nr
Match: PKU75882.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatum])

HSP 1 Score: 107.1 bits (266), Expect = 4.6e-19
Identity = 84/262 (32.06%), Postives = 119/262 (45.42%), Query Frame = 0

Query: 173 PDSLSTMSVESYHPDENWFLDSGATHHMTPEASSLYTSMPFNGGEQVTVGNGLAFVAFFS 232
           P + +  S  S H    W+LDSGA+ H+T + +   +S P+ G  QV +GNG       +
Sbjct: 322 PPNTAFFSSPSPHTSSEWYLDSGASTHLTSDQTQFQSSQPYTGSSQVILGNGNQLPIHNT 381

Query: 233 AMGL---PLAGHLLRRRRVSPVVADNGDASSDSGGDFGQTKAVWSIFR------RLFGVG 292
             G+   P     L+   + P ++ N               +V+ + R           G
Sbjct: 382 GKGILPTPQGSLQLKNLNLVPNLSFN-------------LLSVYQLTRDNNCLITFSSCG 441

Query: 293 RDCSDFWVFWGVFPMNPCVDGLYKLLSPSSTPSSAWPLLSLSSTAVFLSSAVVVPD-WHH 352
            +  D      V    PC++GLY + + S          +LS T + L S   +PD WH 
Sbjct: 442 FEIKDMMTH-QVLLKGPCINGLYSIRATSP---------NLSKTELALISVQAIPDLWHR 501

Query: 353 RLGHPAAAILHRVMS-FCHVSSPSVPNFCNSCQLAKSHSLPFSLSQSQPVAPFHLVHSDQ 412
           RLGHP+A+ L  +   F  +   S  + CNSCQ+AKSH  PF +SQS  V+PF LVHSD 
Sbjct: 502 RLGHPSASTLSSLAKHFSDICISSASSMCNSCQMAKSHRKPFPVSQSTSVSPFDLVHSD- 548

Query: 413 PSVPNPPIPFPSASISPSTSSQ 424
             V  P         SPSTS Q
Sbjct: 562 --VWGP---------SPSTSCQ 548

BLAST of Lag0015796 vs. NCBI nr
Match: RVX01101.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera])

HSP 1 Score: 106.7 bits (265), Expect = 6.0e-19
Identity = 74/217 (34.10%), Postives = 99/217 (45.62%), Query Frame = 0

Query: 186 PDENWFLDSGATHHMTPEASSLYTSMPFNGGEQVTVGNGLAFVAFFSAMGLPLAGHLLRR 245
           PD NW++DSGATHH TP  + L T  PF+G +QVTVGN   FV F+       A H L +
Sbjct: 12  PDTNWYMDSGATHHFTPNINMLDTVTPFSGSDQVTVGN--VFVEFY-------ATHFLVK 71

Query: 246 RRVSPVVADNGDASSDSGGDFGQTKAVWSIFRRLFGVGRDCSDFWVFWGVFPMNPCVDGL 305
            +VS  V   G                                              +GL
Sbjct: 72  DQVSKRVLFQGQLD-------------------------------------------NGL 131

Query: 306 YKLLSPSSTPSSAWPLLSLSSTAVFLSSAVVVPDWHHRLGHPAAAILHRVMSFCHVSSPS 365
           YK+ S  S    ++P        VF+++      WH RLGHP   ++++++  C+++   
Sbjct: 132 YKVQSSCSPSDVSFP------PQVFIANTKDPNLWHKRLGHPTLFVVNQILDSCNIARTQ 170

Query: 366 VP--NFCNSCQLAKSHSLPFSLSQSQPVAPFHLVHSD 401
               NFCNSCQLAKSH   FSLS S  V  F LVH+D
Sbjct: 192 KIRFNFCNSCQLAKSHMFHFSLSPSIAVKHFELVHTD 170

BLAST of Lag0015796 vs. NCBI nr
Match: KAF8399498.1 (hypothetical protein HHK36_015364 [Tetracentron sinense])

HSP 1 Score: 103.6 bits (257), Expect = 5.0e-18
Identity = 70/222 (31.53%), Postives = 115/222 (51.80%), Query Frame = 0

Query: 187 DENWFLDSGATHHMTPEASSLYTSMPFNGGEQVTVGNGLAFVAFFSAMGLPL-----AGH 246
           D++WFLDSGATHH+T  +++L  S P++G +QVTVGNG       SA+G  +        
Sbjct: 209 DDSWFLDSGATHHLTQSSANLINSTPYSGLDQVTVGNGKQL--SISAVGSQILDSNSVSF 268

Query: 247 LLRRRRVSPVVADNGDASSDSGGDFGQTKAVWSIFRRLFGVGRDCSDFWVFWGVFPMNPC 306
            L++    P +++N  + +    D     +V       F V    +       V      
Sbjct: 269 SLKKVFYVPYLSNNLISVAQFCAD---NNSVIEFHPNCFFVKDRTTK-----RVLAQGKL 328

Query: 307 VDGLYK--LLSPSSTPSSAWPLLSLSSTAVFLSSAVVVPDWHHRLGHPAAAILHRVMSFC 366
            +GLYK  + S ++  S    + + +S + F S    +  WH R+GH ++ I+HR++  C
Sbjct: 329 ENGLYKFPVTSTANKQSDCSSIFNNTSVSAFHSHVDTIELWHSRVGHASSEIVHRILKDC 388

Query: 367 HVS-SPSVPNFCNSCQLAKSHSLPFSLSQSQPVAPFHLVHSD 401
           +VS   +  + C+SCQ AKSH LP+ +S S+  +P  LV++D
Sbjct: 389 NVSVRNNTDHLCSSCQYAKSHRLPYQVSTSRAASPLDLVYTD 420

BLAST of Lag0015796 vs. NCBI nr
Match: KAF8393253.1 (hypothetical protein HHK36_021494 [Tetracentron sinense])

HSP 1 Score: 103.2 bits (256), Expect = 6.6e-18
Identity = 70/222 (31.53%), Postives = 113/222 (50.90%), Query Frame = 0

Query: 187 DENWFLDSGATHHMTPEASSLYTSMPFNGGEQVTVGNGLAFVAFFSAMGLPL-----AGH 246
           D++WFLDSGATHH+T  +++L  S P+ G +QVTVGNG       SA+G  +        
Sbjct: 343 DDSWFLDSGATHHLTQSSANLINSTPYTGLDQVTVGNGKQL--SISAVGSQILDSNSVSF 402

Query: 247 LLRRRRVSPVVADNGDASSDSGGDFGQTKAVWSIFRRLFGVGRDCSDFWVFWGVFPMNPC 306
            L++    P +++N  + +    D     +V       F V    +       V      
Sbjct: 403 SLKKVFYMPYLSNNLISVAQFCAD---NNSVIEFHPNCFFVKDRTTK-----RVLAQGKL 462

Query: 307 VDGLYK--LLSPSSTPSSAWPLLSLSSTAVFLSSAVVVPDWHHRLGHPAAAILHRVMSFC 366
            +GLYK  + S  +  S    + + +S + F S    +  WH R+GH ++ I+HR++  C
Sbjct: 463 ENGLYKFPVTSTENKQSDCSSIFNNTSVSAFHSHVDTIELWHSRVGHASSEIVHRILKDC 522

Query: 367 HVS-SPSVPNFCNSCQLAKSHSLPFSLSQSQPVAPFHLVHSD 401
           +VS   +  + C+SCQ AKSH LP+ +S S+  +P  LV++D
Sbjct: 523 NVSVRNNTDHLCSSCQYAKSHRLPYQVSTSRAASPLDLVYTD 554

BLAST of Lag0015796 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.3e-13
Identity = 76/260 (29.23%), Postives = 114/260 (43.85%), Query Frame = 0

Query: 157 QALLTTAAPTHSPSP-TP-DSLSTMSVESYHPDENWFLDSGATHHMTPEASSLYTSMPFN 216
           Q  L++      PSP TP    + +++ S +   NW LDSGATHH+T + ++L    P+ 
Sbjct: 296 QHFLSSVNSQQPPSPFTPWQPRANLALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYT 355

Query: 217 GGEQVTVGNGLAFVAFFSAMGLPLAGHLLRRRRVSPVVADNGDASSDSGGDFGQTKAVWS 276
           GG+ V V +G       S + +   G      +  P+   N                V +
Sbjct: 356 GGDDVMVADG-------STIPISHTGSTSLSTKSRPLNLHN-------------ILYVPN 415

Query: 277 IFRRLFGVGRDCSDFWVFWGVFPMNPCV----DGLYKLLSPSSTPSSAWPLLSLSSTAVF 336
           I + L  V R C+   V    FP +  V     G+  L   +      WP+ S    ++F
Sbjct: 416 IHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVSLF 475

Query: 337 L--SSAVVVPDWHHRLGHPAAAILHRVMSFCHVS--SPSVPNF-CNSCQLAKSHSLPFSL 396
              SS      WH RLGHPA +IL+ V+S   +S  +PS     C+ C + KS+ +PFS 
Sbjct: 476 ASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQ 535

Query: 397 SQSQPVAPFHLVHSDQPSVP 406
           S      P   ++SD  S P
Sbjct: 536 STINSTRPLEYIYSDVWSSP 535

BLAST of Lag0015796 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 8.7e-13
Identity = 86/308 (27.92%), Postives = 129/308 (41.88%), Query Frame = 0

Query: 114 NNSYRPT---SRPFNSTPRTPFNR---PNFQAFSIPPAPVSPTYQTRPPQALLTTAAPTH 173
           +NS++P+   SR  N  P+    R    + Q  S    P    +Q+   Q   T      
Sbjct: 234 SNSWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSAKRCPQLHQFQSTTNQQQST------ 293

Query: 174 SPSPTPDSLSTMSVESYHPDENWFLDSGATHHMTPEASSLYTSMPFNGGEQVTVGNGLAF 233
           SP       + ++V S +   NW LDSGATHH+T + ++L    P+ GG+ V + +G   
Sbjct: 294 SPFTPWQPRANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTI 353

Query: 234 -VAFFSAMGLPLAGHLLRRRRVSPVVADNGDASSDSGGDFGQTKAVWSIFRRLFGVGRDC 293
            +    +  LP +   L                     D  +   V +I + L  V R C
Sbjct: 354 PITHTGSASLPTSSRSL---------------------DLNKVLYVPNIHKNLISVYRLC 413

Query: 294 SDFWVFWGVFPMNPCV----DGLYKLLSPSSTPSSAWPLLSLSSTAVFLS--SAVVVPDW 353
           +   V    FP +  V     G+  L   +      WP+ S  + ++F S  S      W
Sbjct: 414 NTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSW 473

Query: 354 HHRLGHPAAAILHRVMS--FCHVSSPSVPNF-CNSCQLAKSHSLPFSLSQSQPVAPFHLV 406
           H RLGHP+ AIL+ V+S     V +PS     C+ C + KSH +PFS S      P   +
Sbjct: 474 HSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYI 514

BLAST of Lag0015796 vs. ExPASy TrEMBL
Match: A0A438GC62 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_210 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.3e-23
Identity = 108/335 (32.24%), Postives = 153/335 (45.67%), Query Frame = 0

Query: 98  DQQLNMAQANLSSLHINNSY-------RPTSRPFNSTPRT-----PFNRPNFQAFSIPPA 157
           DQ LN  QAN      NNS        +      N   RT     P   PN  AF+    
Sbjct: 233 DQNLNFPQANPRQPGYNNSIPQCQICGKSGHIALNGYHRTNLTYHPPVFPNAAAFN---- 292

Query: 158 PVSPTYQTRPPQALLTTAAPTHSPSPTPDSLSTMSVESYHPDENWFLDSGATHHMTPEAS 217
           P  P   + P  A+LTT+A        P  LS+ S      D +W++DSGATHH TPE  
Sbjct: 293 PNGPGQTSSPISAMLTTSA-------APTGLSSQS-----SDNSWYMDSGATHHFTPEFG 352

Query: 218 SLYTSMPFNGGEQVTVGNGLAFVAFFSAMGLPLAGHLLRRRRVSPVVADNGDASSDSGGD 277
            +  +M ++ G+   VGN          +G+   GH L    V P+  ++   + +    
Sbjct: 353 HMTDAMQYSSGDHALVGND-------KQIGISHIGHALLHSSVKPIHLNHVLHTPEI--- 412

Query: 278 FGQTKAVWSIFRRLFGVGRDCSDFWVFWGVFPM------------NPCVDGLYKLLSPSS 337
              +K + S+ R    +G D   F  F+  F +                 GLYKL  P++
Sbjct: 413 ---SKQLISVTR----LGADNKAFVEFYPTFFLVKDQQTKQLLLQGHLERGLYKLAQPTT 472

Query: 338 TPSSAWPLLSLSST--------AVFLSSAVVVPDWHHRLGHPAAAILHRVMSFCHVSSPS 397
             SS+  + S  ST          FLS    V  WH+RLGHPA  ++H+V+  C++   +
Sbjct: 473 LTSSS--VSSSPSTQFFPAPPAQAFLSQQNQVVLWHNRLGHPAPKVVHQVLQSCNLKFSN 532

Query: 398 VPNFCNSCQLAKSHSLPFSLSQSQPVAPFHLVHSD 401
             + C+SCQLAKSH LPF LS+S+ + PF LV+SD
Sbjct: 533 SEHICSSCQLAKSHRLPFVLSESRAMKPFDLVYSD 532

BLAST of Lag0015796 vs. ExPASy TrEMBL
Match: A0A2I0WJQ1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Dendrobium catenatum OX=906689 GN=MA16_Dca005929 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.2e-19
Identity = 84/262 (32.06%), Postives = 119/262 (45.42%), Query Frame = 0

Query: 173 PDSLSTMSVESYHPDENWFLDSGATHHMTPEASSLYTSMPFNGGEQVTVGNGLAFVAFFS 232
           P + +  S  S H    W+LDSGA+ H+T + +   +S P+ G  QV +GNG       +
Sbjct: 322 PPNTAFFSSPSPHTSSEWYLDSGASTHLTSDQTQFQSSQPYTGSSQVILGNGNQLPIHNT 381

Query: 233 AMGL---PLAGHLLRRRRVSPVVADNGDASSDSGGDFGQTKAVWSIFR------RLFGVG 292
             G+   P     L+   + P ++ N               +V+ + R           G
Sbjct: 382 GKGILPTPQGSLQLKNLNLVPNLSFN-------------LLSVYQLTRDNNCLITFSSCG 441

Query: 293 RDCSDFWVFWGVFPMNPCVDGLYKLLSPSSTPSSAWPLLSLSSTAVFLSSAVVVPD-WHH 352
            +  D      V    PC++GLY + + S          +LS T + L S   +PD WH 
Sbjct: 442 FEIKDMMTH-QVLLKGPCINGLYSIRATSP---------NLSKTELALISVQAIPDLWHR 501

Query: 353 RLGHPAAAILHRVMS-FCHVSSPSVPNFCNSCQLAKSHSLPFSLSQSQPVAPFHLVHSDQ 412
           RLGHP+A+ L  +   F  +   S  + CNSCQ+AKSH  PF +SQS  V+PF LVHSD 
Sbjct: 502 RLGHPSASTLSSLAKHFSDICISSASSMCNSCQMAKSHRKPFPVSQSTSVSPFDLVHSD- 548

Query: 413 PSVPNPPIPFPSASISPSTSSQ 424
             V  P         SPSTS Q
Sbjct: 562 --VWGP---------SPSTSCQ 548

BLAST of Lag0015796 vs. ExPASy TrEMBL
Match: A0A438IWI4 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_118 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.9e-19
Identity = 74/217 (34.10%), Postives = 99/217 (45.62%), Query Frame = 0

Query: 186 PDENWFLDSGATHHMTPEASSLYTSMPFNGGEQVTVGNGLAFVAFFSAMGLPLAGHLLRR 245
           PD NW++DSGATHH TP  + L T  PF+G +QVTVGN   FV F+       A H L +
Sbjct: 12  PDTNWYMDSGATHHFTPNINMLDTVTPFSGSDQVTVGN--VFVEFY-------ATHFLVK 71

Query: 246 RRVSPVVADNGDASSDSGGDFGQTKAVWSIFRRLFGVGRDCSDFWVFWGVFPMNPCVDGL 305
            +VS  V   G                                              +GL
Sbjct: 72  DQVSKRVLFQGQLD-------------------------------------------NGL 131

Query: 306 YKLLSPSSTPSSAWPLLSLSSTAVFLSSAVVVPDWHHRLGHPAAAILHRVMSFCHVSSPS 365
           YK+ S  S    ++P        VF+++      WH RLGHP   ++++++  C+++   
Sbjct: 132 YKVQSSCSPSDVSFP------PQVFIANTKDPNLWHKRLGHPTLFVVNQILDSCNIARTQ 170

Query: 366 VP--NFCNSCQLAKSHSLPFSLSQSQPVAPFHLVHSD 401
               NFCNSCQLAKSH   FSLS S  V  F LVH+D
Sbjct: 192 KIRFNFCNSCQLAKSHMFHFSLSPSIAVKHFELVHTD 170

BLAST of Lag0015796 vs. ExPASy TrEMBL
Match: A0A803NGK1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 7.1e-18
Identity = 97/317 (30.60%), Postives = 138/317 (43.53%), Query Frame = 0

Query: 123 PFNSTPRTPFNRPNFQAFSIPPAPVSPTYQTRPPQALLTTAAPTHSPSPTPDSLSTMSVE 182
           P+N+  R P  R N   F+ P        +  PP    T   P     P P S      +
Sbjct: 94  PYNN--RGPPYRTNDNQFTQPNMS-----KNGPPNNRSTQPNPAGRGGPNP-SRGNQEFQ 153

Query: 183 SYH------PDENWFLDSGATHHMTPEASSLYTSMPFNGGEQVTVGNGLAFVAFFSAMGL 242
           +Y        DE+W+ DSGATHH+TP +S+L TS  ++G EQ+ +GNG         MGL
Sbjct: 154 AYFASAESVADESWYPDSGATHHLTPNSSNLDTSTSYSGQEQIMIGNG---------MGL 213

Query: 243 PLAGHLLRRRRVSPVVADNGDASSDSGGDFGQTKAVWSIF------RRLFGVGRDCSDFW 302
           P+               +N   ++ S     +T  V ++       + L  V +   D  
Sbjct: 214 PI---------------ENIGNTTFSSLFPSKTLLVNNLLHVPAMTKNLLSVSQFAKDNN 273

Query: 303 VFWGVFPMNPCV---------------DGLYK-----LLSPSSTPSSAWPLLSLSSTAVF 362
           +F+   P + CV               +GLYK     L SPS   + A P    +     
Sbjct: 274 IFFEFHPFSCCVKDQVTKEILLVGKLENGLYKFDTLHLSSPSVNQAKAPPTSLSTQHIQC 333

Query: 363 LSSAVVVPD-----WHHRLGHPAAAILHRVMSFCHVSSPS--VPNFCNSCQLAKSHSLPF 401
             S   VP+     WH RLGHP+A I+   +S C++  P+   P+ CN+C L KSH LPF
Sbjct: 334 FHSHTFVPNTQFSLWHSRLGHPSAKIVKLALSNCNIHLPNKVFPDICNACCLGKSHKLPF 378

BLAST of Lag0015796 vs. ExPASy TrEMBL
Match: A0A438H229 (7-deoxyloganetin glucosyltransferase OS=Vitis vinifera OX=29760 GN=UGT85A24_11 PE=3 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.6e-17
Identity = 82/272 (30.15%), Postives = 119/272 (43.75%), Query Frame = 0

Query: 164 APTHSPSP---TPDSLSTMSVESYHPDENWFLDSGATHHMTPEASSLYTSMPFNGGEQVT 223
           APT S S    TP + + M+  S    ++WFLDSGATHH++  A++++   P+NG + V 
Sbjct: 317 APTSSTSQIGLTPPAQAMMAAPSSASMDSWFLDSGATHHLSHTAANIHNGTPYNGTDSVM 376

Query: 224 VGNGLAFVAFFSAMGLPLAGHLLRRRRVSPVVADNGDASSDSGGDFGQTKAVWSIFRRLF 283
           VGNG        ++ +   GH        P V  N                V  +   L 
Sbjct: 377 VGNG-------KSLPITQVGHSFLHTPAKPFVLHN-------------VLHVPQLTSNLI 436

Query: 284 GVGRDCSDFWVFWGVFPMNPCVD---------------GLYKLLSPSSTPSSAWPLLSLS 343
            V + C+D        P +  V                GLYK   P+S+ SS  P  S  
Sbjct: 437 SVSKFCTDNNTILEFHPSSFFVKDKDTKVTLLQGQLERGLYKF--PTSSISS--PTASPK 496

Query: 344 STAVFLSSAVVVPDWHHRLGHPAAAILHRVMSFCHVS--SPSVPNFCNSCQLAKSHSLPF 403
                  +      WH R GHP+  IL ++   C++S  S    + CN+C  AKSH +PF
Sbjct: 497 HQVFLTKTQPTTMLWHQRFGHPSGVILQKIFHTCNISHNSNKTVDVCNACCCAKSHKVPF 556

Query: 404 SLSQSQPVAPFHLVHSDQPSVPNPPIPFPSAS 416
           SLS S+  +P  L+H+D       P P PS++
Sbjct: 557 SLSTSRASSPLELIHADLWG----PAPVPSST 560

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RVW69807.16.8e-2332.24Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera][more]
PKU75882.14.6e-1932.06Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatu... [more]
RVX01101.16.0e-1934.10Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera][more]
KAF8399498.15.0e-1831.53hypothetical protein HHK36_015364 [Tetracentron sinense][more]
KAF8393253.16.6e-1831.53hypothetical protein HHK36_021494 [Tetracentron sinense][more]
Match NameE-valueIdentityDescription
Q94HW22.3e-1329.23Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT948.7e-1327.92Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Match NameE-valueIdentityDescription
A0A438GC623.3e-2332.24Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976... [more]
A0A2I0WJQ12.2e-1932.06Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Dendrobium catena... [more]
A0A438IWI42.9e-1934.10Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976... [more]
A0A803NGK17.1e-1830.60Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A438H2291.6e-1730.157-deoxyloganetin glucosyltransferase OS=Vitis vinifera OX=29760 GN=UGT85A24_11 P... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 304..378
e-value: 2.0E-8
score: 34.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..66

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0015796.1Lag0015796.1mRNA