Lag0015753 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0015753
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUlp1-like peptidase
Locationchr12: 22969344 .. 22970093 (+)
RNA-Seq ExpressionLag0015753
SyntenyLag0015753
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCTGTGAGGACTTGGATAATTTATACTCTAATCTAGAGTTCCAAACTGAGGAGGATGAAGTGAAGATGTCCATATTTTACTTTATTGAGCTCGTGATGATGGGGAGAGAGAAAAGACAGTTAATTGACACATCCCTGTTGAATATCATCGACGATGGGTTGCTTTCTATAATGAGGATTGGAGCAACATGATATTCCAAAAGACTATAAAGAGCCTCAAGAAAGCATTAAAAGGAAAGGCAGAGTCGTACAAGGCAAAAGGATCGGATTAAAAGAAGCAAGCGACTTATAGTTTATATGGATTTCCTTTCGCGTTTCAGGTTGACATATGTTGAATTCAATGTCTTAATTTTTTTAAAGTGTTTTTCTTTCCATATTTCAAACTAATTTATACTATGATGCAGGTTTGGGCGTATGAGACCATTTCCTCATTGACTGGAAAGGTTGCAAATCGCATGAGTGACACGCCCATGCCGCGCATTCAAAGATGGTCATGCTCGCACTCTCCTTCGTACACCCGTCTTGAAACTGAGGTGTTTGCATCGATGGCGGTCAGTACTAGATTTCATTTTGTTCGTTAATTAAATTGATTTTGTTACAAAATAACTTGATTGTTGATAATTTTTGTAGGTTGTTGTCACGATACATCTTGTTCCCACCGACGAAGAGAGAGAGTTTATGTCTCGAACGTTGGAGGCTCCACATGTAGAACCTGACCTCCCCCCTCTCCCTGTCGCTGTCCCTTAG

mRNA sequence

ATGAGCTGTGAGGACTTGGATAATTTATACTCTAATCTAGAGTTCCAAACTGAGGAGGATGAAGTGAAGATGTCCATATTTTACTTTATTGAGCTCGTTTGGGCGTATGAGACCATTTCCTCATTGACTGGAAAGGTTGCAAATCGCATGAGTGACACGCCCATGCCGCGCATTCAAAGATGGTCATGCTCGCACTCTCCTTCGTACACCCGTCTTGAAACTGAGGTGTTTGCATCGATGGCGGTTGTTGTCACGATACATCTTGTTCCCACCGACGAAGAGAGAGAGTTTATGTCTCGAACGTTGGAGGCTCCACATGTAGAACCTGACCTCCCCCCTCTCCCTGTCGCTGTCCCTTAG

Coding sequence (CDS)

ATGAGCTGTGAGGACTTGGATAATTTATACTCTAATCTAGAGTTCCAAACTGAGGAGGATGAAGTGAAGATGTCCATATTTTACTTTATTGAGCTCGTTTGGGCGTATGAGACCATTTCCTCATTGACTGGAAAGGTTGCAAATCGCATGAGTGACACGCCCATGCCGCGCATTCAAAGATGGTCATGCTCGCACTCTCCTTCGTACACCCGTCTTGAAACTGAGGTGTTTGCATCGATGGCGGTTGTTGTCACGATACATCTTGTTCCCACCGACGAAGAGAGAGAGTTTATGTCTCGAACGTTGGAGGCTCCACATGTAGAACCTGACCTCCCCCCTCTCCCTGTCGCTGTCCCTTAG

Protein sequence

MSCEDLDNLYSNLEFQTEEDEVKMSIFYFIELVWAYETISSLTGKVANRMSDTPMPRIQRWSCSHSPSYTRLETEVFASMAVVVTIHLVPTDEEREFMSRTLEAPHVEPDLPPLPVAVP
Homology
[Close]
BLAST of Lag0015753 vs. NCBI nr
Match: XP_022154965.1 (uncharacterized protein LOC111022110 [Momordica charantia])

HSP 1 Score: 76.3 bits (186), Expect = 2.1e-10
Identity = 39/83 (46.99%), Postives = 56/83 (67.47%), Query Frame = 0 

Query: 33  VWAYETISSLTGKVANRMSDTPMPRIQRWSCSHSPSYTRLETEVFASMAVVVTIHLVPTD 92
           VWAYETIS+L+ +VA R++D  +PR+ RWSC++S ++  LE EVF ++   V + L  TD
Sbjct: 77  VWAYETISTLSTRVALRLNDDAIPRLLRWSCTYSRAFNVLEREVFENVKSKVVVRLEATD 136

Query: 93  EEREFMSRTLEAPHVEPDLPPLP 116
            ER+ M+R +  P V P  PP P
Sbjct: 137 VERQHMARVMHPP-VAPVGPPAP 158

[Close]
BLAST of Lag0015753 vs. NCBI nr
Match: XP_022136676.1 (uncharacterized protein LOC111008328 [Momordica charantia])

HSP 1 Score: 76.3 bits (186), Expect = 2.1e-10
Identity = 39/83 (46.99%), Postives = 56/83 (67.47%), Query Frame = 0 

Query: 33  VWAYETISSLTGKVANRMSDTPMPRIQRWSCSHSPSYTRLETEVFASMAVVVTIHLVPTD 92
           VWAYETIS+L+ +VA R++D  +PR+ RWSC++S ++  LE EVF ++   V + L  TD
Sbjct: 20  VWAYETISTLSTRVALRLNDDAIPRLLRWSCTYSRAFNVLEREVFENVKSKVVVRLEATD 79

Query: 93  EEREFMSRTLEAPHVEPDLPPLP 116
            ER+ M+R +  P V P  PP P
Sbjct: 80  VERQHMARVMHPP-VTPVGPPAP 101

[Close]
BLAST of Lag0015753 vs. NCBI nr
Match: TYK26811.1 (hypothetical protein E5676_scaffold124G001260 [Cucumis melo var. makuwa])

HSP 1 Score: 70.5 bits (171), Expect = 1.1e-08
Identity = 35/81 (43.21%), Postives = 51/81 (62.96%), Query Frame = 0 

Query: 5  DLDNLYSNLEFQTEEDEVKMSIFYFIELV------------WAYETISSLTGKVANRMSD 64
          +LDN Y NL+F+ +EDEVK+S+FYFI++V            W Y+ +SSL+G+V +R+S 
Sbjct: 5  ELDNDYPNLQFENDEDEVKISLFYFIKIVMMGRTSLAMTEAWVYKILSSLSGRVVSRVSS 64

Query: 65 TPMPRIQRWSCSHSPSYTRLE 74
            +P I  W CS+S     LE
Sbjct: 65 DAIPCIMWWGCSYSLGLKDLE 85

[Close]
BLAST of Lag0015753 vs. NCBI nr
Match: KGN49944.1 (hypothetical protein Csa_000148 [Cucumis sativus])

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-07
Identity = 30/65 (46.15%), Postives = 45/65 (69.23%), Query Frame = 0 

Query: 33  VWAYETISSLTGKVANRMSDTPMPRIQRWSCSHSPSYTRLETEVFASMAVVVTIHLVPTD 92
           VWAYE ISS+ GK   R+++  +PRI RWSCS+S     L+ +VF SM +V++  L+ +D
Sbjct: 241 VWAYEIISSIAGKAVTRLNNEAVPRILRWSCSYSLPSKLLQRDVFNSMRIVISPTLIMSD 300

Query: 93  EEREF 98
            E++F
Sbjct: 301 AEKQF 305

[Close]
BLAST of Lag0015753 vs. NCBI nr
Match: XP_031741885.1 (uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus])

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-07
Identity = 30/65 (46.15%), Postives = 45/65 (69.23%), Query Frame = 0 

Query: 33  VWAYETISSLTGKVANRMSDTPMPRIQRWSCSHSPSYTRLETEVFASMAVVVTIHLVPTD 92
           VWAYE ISS+ GK   R+++  +PRI RWSCS+S     L+ +VF SM +V++  L+ +D
Sbjct: 324 VWAYEIISSIAGKAVTRLNNEAVPRILRWSCSYSLPSKLLQRDVFNSMRIVISPTLIMSD 383

Query: 93  EEREF 98
            E++F
Sbjct: 384 AEKQF 388

The following BLAST results are available for this feature:
BLAST of Lag0015753 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022154965.12.1e-1046.99uncharacterized protein LOC111022110 [Momordica charantia][more]
XP_022136676.12.1e-1046.99uncharacterized protein LOC111008328 [Momordica charantia][more]
TYK26811.11.1e-0843.21hypothetical protein E5676_scaffold124G001260 [Cucumis melo var. makuwa][more]
KGN49944.11.2e-0746.15hypothetical protein Csa_000148 [Cucumis sativus][more]
XP_031741885.11.2e-0746.15uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus][more]
BLAST of Lag0015753 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0015753.1Lag0015753.1mRNA