Lag0015732 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCACAATGAATTTGAGATGAGTATGATGGGAGAGCTTAGCTTCTTCCTTGGACTCCAAATCAAACAACTCAAGGATGACATTTTCATAAGTCAAGAGAAATATACAAGGGATTTGCTCAAAAGGTTCAAATTCAATGAAGGTAAAATTGCAAAAACTCCTATGAGCACATCCACTAAGCTTGACAAGGATGAAGAAGGTAAGTGTGTGGATATAAAATCTTATAGAGGTATGATTGGATCTTTACTTTATTTAACCGCTAGTAGATCCAATATCATGTTTAGTGTATGTCTTTGTGCTCGATTTCAATCTTGTCCTAAGGAATCACATTTGCATGTCGTTAAAAGAATTTTTAAATATTTGCTTGGTCTATTGATTTAGGCTTATGGTATCCTAGAAATAATGCTGAATTTAAATTGGTAGGATATTCCGACGCGGATTTTGCGGGTAGTTTACTTGACCGTAAGAGTACTAGTGGGACTTGCCAATTCCTTGGTAGTTCCTTAGTTTCTTGGTTTAATAAAAAGCAAAATTCGGTTGCCTTATCTACTATGGAAGCGAAATATATTGCGGTTGCTAGTTGTTGTGCTCAAATTCTTTGGATGAAACAAACTCTTTGTGATTTTGGATTAAAGTTTGATAATGTGCCTATATTTTGTGATAATACTAGTGCTATTAATTTGACTAAAAATCTTACACATCATTCTAGGACTAAGCATATTGATATTAGACATCACTTTATTAGAGAACATGTGTAAAATGGTAATATTACTCTTGAATTTATAGGCTCTAATAATCAATTAGCGGATATTTTTACCAAGCCTTTAAATGAAGAAAGTTCTTGTAAAAATAGACTTGAGCTCGGTATTATTCGTTGTGATGCCTCTTGATTTTATAATCTTTCTTGTTAAATCTTTTAGAAGGCATTTTGATAGGGGGAGATATGAAAAGCATGTGTTGATAGTCTTAGGGGGAGTTGTGCTAAATTTATGTTCATGTTTTCTATTATGGGAATCATTATGTAGTTCTAAATTTTTCTTAATTATTCTTTTTGATGATTCCAAAGGGGGAGAAGATTAAGAAAAATATGTTATAAATTTATTATGATTTTGATTGTATTTATTAGGAGGAGAATTTATTTTTGAGTGAATTTCAAGAATGATCTTTATGGTGATATGTTGAATTTTATTATGTGCTACCTATGGTTTACATGTATTTCAAGTTATTTTTCTTGTATGGTTTGTCATCATCAAAAATGGGGAGATTGTTGGCTTTTTGGTCCTTACTCTCAAATTAATTAATTAATCATTGTTTTGATGATAACAAATCCAATTTTTAATTATTGAAATTTTTAGTGTTTTAATGTGCCCATAGCGTAGAGCTCGAAACAACGATTCCAACACCTCTTGAATCATTCAAATCAGAGCTAAAACGAAGAAGTTATGGCCGAAATAAGCTTTAACGAAAAATACTTGTGCGCGATGACGTGGCGACTGAGTCAGCATCATGGACCAATCCGACGACGACACGTGGATTAATGGAGGAGTGACACATGGAGCTTTTTGGTTATTTATATTTATATATTATATATATATTATATCTTATTTACAAAAAATATGTGAGTAACGTTTTTTAAAAAAAAAAAATCTGAATGCATTTAATGTTTCTCTCCGTTGGGTGTACAACTTTAAAAAAAAACAATTAAATTTTCTTACCGTTTTCTCACATTATCATTTATATATTATTATTATTATTATTATTATTATTATTTGTTTTAATTTTTTTTTACCGTTAGAGTTTTAAATATATATATATATATATATATATATATATATATATATATATATATTATTTATATATTATTATTAATATTTTTTAATCTCCACCCTTAATTTGTCTTATATTCAAATCCAATGGTCCAAATTAAATTTAACTTTTTACCAACTTCATTATCTTTATAAATCTTCTTCCTTCCCAAAATTTTACCAACACAATTTTACATTTGTACCATCCTCCAAGCTCAAAAGTTTCCATTGTTGCTCTCTCCAAGCTCCCAATTTTTTTTTTTTTCTTTTCATCGTATTCTTGAGAGAGTGTTATTGTATTGTGAGGATACATTTGTTGAGTGCTCAAATTTGTAAATCCACTCTATTGAGAGTTGTATTGTGTTCTTCAAAAATTCCAACACTTGTAACGGTTTGATCCTAACCCGTGAAAAGGATCGGGTTTGCTCTTGAACCCGTAAAAGGAGCGGTGGTGTATCGGTTGGGCTCTAATCCGTGGAAAGAATCGAAAGGTTTTTATTCAAATTCCCAAGAGGCGCTTGGGGAGTGGAGTAGGTCGAGTTTGACCGAACCACTATAAAATTACGGTGTCTTCTTCTCTAACTCTTTCCTTTTTATTTTTGCAATTAATTTAAGCAATTTATTGCATGATTTGGTTTGTTCTTATTTGTTGCATAAATTGAAATTTTCTTATTGCTTATAAAATGTGTATTAATTAGTTCAATTGGGTTAATTTAGGAAAAAGTTTAATTAAACTCTATTCACTCCCCCCCCTCTAGGGTTGCCATACCGATCCAACATAGTGAATATCTACTGTGATAACCAGAGCACAATCTTCTTAACCAAAAATCCACAGTTCCATATCCGAACTAAACACATAGATATCAATTTTCATTTTGTAAGAGATGAAATTGAGAAGGGGGAAATTCAGGTTTTGAAAATACATACCTCGGACAATGCGACGGATATGCTAAATAAACCTCTGACTCAGTTGAAATTCCAGCATTGTCTTCAGTTTGTAGGGTTCCACCTACCAGAGAAAAGGTAAAGGATTAAAGAAGAAGGGAGCAATTCATTCCGACTTTGTTAATTACAAAGGTGGAGATTGTAAAAGAGGAAATTACCTGTAATTCCCCTGTTGTAACCAACCAGCTCGTCCCTCAATTGTCATACCAGTGATCAAATTCGTGAGTATAAAAGGTAGATGAGGATTAGAATAAGGAAGAAAGAAAAATCATATAAGTTGAGAGTGAATTACTTGTACCTTGTAATTGTGATTAGTGTCGGGAATAAAACCAACGACTCCCTTCACAGTGGATGTAGGCCATCGTTGCCGAACCACTATAAACGCTTGTCTTACTTTCTTCTTCCTTTGATTTCTGCGTATTTCGCTTTGAGAGTTTGAGTTCATCATCCGAGTGAGCGGTGGTGAGTTTGTGTGTATGTTTCTTCGACTGTGAGAGAGATTTTCTTCCCTGGGTGTTGCATGTGTTTTGAGTGAGTGGAGAAGGTAGTTTTCACGTGTAATTCTCTCCTTTGGGAAGACTCCAAAATGCAGCAAGATCTTCAATATGACACCTGATAGCGCACATAGCGAGCTATTTTTCCTAGTTATTTTAGTTAGTCTTTGAGTACTGATAACTTGCAAAAAGCAAGTTATTTCTCACCTAAATTTAGATTAAAAGAGGTTATAGAAGAGATTTGATGCGCCATATCAGTGCATATGAGCATAGAATTGTGATAAATGTATCTTTAAAGTGAAATTCTTTGATGCAGTGAGAAAAATGAAAACATTTATTCATCTAATGCATATACCGTAGCTTTTTCTCTTGCCCAAGCTATTTTGTATCGCAGGCGTTGGAACTACCAGGTGAGAAGGTACATCAACAACCTGTTCGGCACTGGTGCTGACATGTGGCAGAGGTGTGAGCTGGCAGATTTAGAAGTTGAACACGCAATCCTGTTACTTGAAGAAGTCAGCATCCTCAAGTCTATAAATTCCAACCATTTGATCGTGAATGAAAAAGGGACGGAAGAGAGAGGAGAAAAAGAAGAACAGAAGGACATCTGTTCAACGCAAAATTCTCCATTTTAATGTATTGCGTTATGTATTCCTTTAGTAGCATGACATAACTTTCTTTTATCAAGGCTTAACCTAGGCACCCATGTAGCAATGAACGTTTCCTGTATGCGTGATATTTTTTAATGAATGAAATTGATGCTTTCAACTTAGATGTGCTAATACTTTCATTACTAATGCTCGTCTGTGATAGCATGCATAAATGCTATCAATTTATAGTTAGATTTAAGAGTTTTTGTTGGATTTTATTGTGGTTTTAATGTTTAAATATATTAAATTCTGAATTTTTGTCCCTAGGAGCTTTTTGATAAATTTTAGAGAAAAAGGAGAAGAATTGGCCTAATTTATAAAAATGCAATCATGAAAGATCAAGGATGGGTCAAAGGAAGAATTAAAGGGCTTTAAAGTGAAGATCAAAGGCCTAAAGTGTAGTGAGGAAGGCCCAAATCTAGTCGAAGAGCCGAATGGAAGAAGGTTCCAGCGAAGGGCAACGTCGCGACGCCGCATCAACTTAGAGAACACGAAGAATACGTCACACCGTCGCGACGCTAACGCACCTGGAGCTCTATTTAAGACGCGATTTGGCCACAGATTGGGATCATCAAGCAACATTCTTCAACAACATTTTTAG ATGCACAATGAATTTGAGATGAGTATGATGGGAGAGCTTAGCTTCTTCCTTGGACTCCAAATCAAACAACTCAAGGATGACATTTTCATAAGTCAAGAGAAATATACAAGGGATTTGCTCAAAAGGTTCAAATTCAATGAAGGTAAAATTGCAAAAACTCCTATGAGCACATCCACTAAGCTTGACAAGGATGAAGAAGGCTTATGGTATCCTAGAAATAATGCTGAATTTAAATTGGTAGGATATTCCGACGCGGATTTTGCGGGTAGTTTACTTGACCGGTTGCCATACCGATCCAACATAGTGAATATCTACTGTGATAACCAGAGCACAATCTTCTTAACCAAAAATCCACAGTTCCATATCCGAACTAAACACATAGATATCAATTTTCATTTTGTAAGAGATGAAATTGAGAAGGGGGAAATTCAGGTTTTGAAAATACATACCTCGGACAATGCGACGGATATGCTAAATAAACCTCTGACTCAGTTGAAATTCCAGCATTGTCTTCAGTTTGTAGGGTTCCACCTACCAGAGAAAAGGCGTTGGAACTACCAGGTGAGAAGGTACATCAACAACCTGTTCGGCACTGGTGCTGACATGTGGCAGAGGTGTGAGCTGGCAGATTTAGAAGTTGAACACGCAATCCTGTTACTTGAAGAAATCAAGGATGGGTCAAAGGAAGAATTAAAGGGCTTTAAAGTGAAGATCAAAGGCCTAAAGTGTAGTGAGGAAGGCCCAAATCTAGTCGAAGAGCCGAATGGAAGAAGGTTCCAGCGAAGGGCAACGTCGCGACGCCGCATCAACTTAGAGAACACGAAGAATACGTCACACCGTCGCGACGCTAACGCACCTGGAGCTCTATTTAAGACGCGATTTGGCCACAGATTGGGATCATCAAGCAACATTCTTCAACAACATTTTTAG ATGCACAATGAATTTGAGATGAGTATGATGGGAGAGCTTAGCTTCTTCCTTGGACTCCAAATCAAACAACTCAAGGATGACATTTTCATAAGTCAAGAGAAATATACAAGGGATTTGCTCAAAAGGTTCAAATTCAATGAAGGTAAAATTGCAAAAACTCCTATGAGCACATCCACTAAGCTTGACAAGGATGAAGAAGGCTTATGGTATCCTAGAAATAATGCTGAATTTAAATTGGTAGGATATTCCGACGCGGATTTTGCGGGTAGTTTACTTGACCGGTTGCCATACCGATCCAACATAGTGAATATCTACTGTGATAACCAGAGCACAATCTTCTTAACCAAAAATCCACAGTTCCATATCCGAACTAAACACATAGATATCAATTTTCATTTTGTAAGAGATGAAATTGAGAAGGGGGAAATTCAGGTTTTGAAAATACATACCTCGGACAATGCGACGGATATGCTAAATAAACCTCTGACTCAGTTGAAATTCCAGCATTGTCTTCAGTTTGTAGGGTTCCACCTACCAGAGAAAAGGCGTTGGAACTACCAGGTGAGAAGGTACATCAACAACCTGTTCGGCACTGGTGCTGACATGTGGCAGAGGTGTGAGCTGGCAGATTTAGAAGTTGAACACGCAATCCTGTTACTTGAAGAAATCAAGGATGGGTCAAAGGAAGAATTAAAGGGCTTTAAAGTGAAGATCAAAGGCCTAAAGTGTAGTGAGGAAGGCCCAAATCTAGTCGAAGAGCCGAATGGAAGAAGGTTCCAGCGAAGGGCAACGTCGCGACGCCGCATCAACTTAGAGAACACGAAGAATACGTCACACCGTCGCGACGCTAACGCACCTGGAGCTCTATTTAAGACGCGATTTGGCCACAGATTGGGATCATCAAGCAACATTCTTCAACAACATTTTTAG MHNEFEMSMMGELSFFLGLQIKQLKDDIFISQEKYTRDLLKRFKFNEGKIAKTPMSTSTKLDKDEEGLWYPRNNAEFKLVGYSDADFAGSLLDRLPYRSNIVNIYCDNQSTIFLTKNPQFHIRTKHIDINFHFVRDEIEKGEIQVLKIHTSDNATDMLNKPLTQLKFQHCLQFVGFHLPEKRRWNYQVRRYINNLFGTGADMWQRCELADLEVEHAILLLEEIKDGSKEELKGFKVKIKGLKCSEEGPNLVEEPNGRRFQRRATSRRRINLENTKNTSHRRDANAPGALFKTRFGHRLGSSSNILQQHF Homology
BLAST of Lag0015732 vs. NCBI nr
Match: GEU86091.1 (retrovirus-related Pol polyprotein from transposon TNT 1-94 [Tanacetum cinerariifolium]) HSP 1 Score: 157.9 bits (398), Expect = 1.4e-34 Identity = 91/195 (46.67%), Postives = 113/195 (57.95%), Query Frame = 0
BLAST of Lag0015732 vs. NCBI nr
Match: CAN70326.1 (hypothetical protein VITISV_041472 [Vitis vinifera]) HSP 1 Score: 157.9 bits (398), Expect = 1.4e-34 Identity = 95/220 (43.18%), Postives = 118/220 (53.64%), Query Frame = 0
BLAST of Lag0015732 vs. NCBI nr
Match: PWA63219.1 (retrotransposon protein [Artemisia annua]) HSP 1 Score: 156.8 bits (395), Expect = 3.1e-34 Identity = 87/222 (39.19%), Postives = 115/222 (51.80%), Query Frame = 0
BLAST of Lag0015732 vs. NCBI nr
Match: GEU93550.1 (hypothetical protein [Tanacetum cinerariifolium]) HSP 1 Score: 153.7 bits (387), Expect = 2.6e-33 Identity = 95/227 (41.85%), Postives = 123/227 (54.19%), Query Frame = 0
BLAST of Lag0015732 vs. NCBI nr
Match: RVW40379.1 (Copia protein [Vitis vinifera]) HSP 1 Score: 153.7 bits (387), Expect = 2.6e-33 Identity = 88/194 (45.36%), Postives = 108/194 (55.67%), Query Frame = 0
BLAST of Lag0015732 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 5.7e-15 Identity = 34/74 (45.95%), Postives = 53/74 (71.62%), Query Frame = 0
BLAST of Lag0015732 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.1e-13 Identity = 45/125 (36.00%), Postives = 69/125 (55.20%), Query Frame = 0
BLAST of Lag0015732 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.1e-13 Identity = 44/125 (35.20%), Postives = 72/125 (57.60%), Query Frame = 0
BLAST of Lag0015732 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 59.3 bits (142), Expect = 8.8e-08 Identity = 27/68 (39.71%), Postives = 38/68 (55.88%), Query Frame = 0
BLAST of Lag0015732 vs. ExPASy TrEMBL
Match: A5BMB5 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_041472 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 6.7e-35 Identity = 95/220 (43.18%), Postives = 118/220 (53.64%), Query Frame = 0
BLAST of Lag0015732 vs. ExPASy TrEMBL
Match: A0A6L2NIK7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Tanacetum cinerariifolium OX=118510 GN=Tci_058069 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 6.7e-35 Identity = 91/195 (46.67%), Postives = 113/195 (57.95%), Query Frame = 0
BLAST of Lag0015732 vs. ExPASy TrEMBL
Match: A0A2U1MPN7 (Retrotransposon protein OS=Artemisia annua OX=35608 GN=CTI12_AA355870 PE=4 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 1.5e-34 Identity = 87/222 (39.19%), Postives = 115/222 (51.80%), Query Frame = 0
BLAST of Lag0015732 vs. ExPASy TrEMBL
Match: A0A438DY28 (Copia protein OS=Vitis vinifera OX=29760 GN=GIP_425 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 1.3e-33 Identity = 88/194 (45.36%), Postives = 108/194 (55.67%), Query Frame = 0
BLAST of Lag0015732 vs. ExPASy TrEMBL
Match: A0A6L2P531 (Integrase catalytic domain-containing protein (Fragment) OS=Tanacetum cinerariifolium OX=118510 GN=Tci_065528 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 1.3e-33 Identity = 95/227 (41.85%), Postives = 123/227 (54.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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