Lag0015711 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0015711
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	protein VTE6, chloroplastic
Location	chr12: 21230012 .. 21235587 (+)
RNA-Seq Expression	Lag0015711
Synteny	Lag0015711

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCGCAATTCAATTGCAATTTCAAACAAACAAAAACAGGTTTCACTTTTAGTCCCTAGCAACGGCGCCAAAAACTTGGTTCGGCGTTAGGCTAAATGATGGATGTTAGGAAAGACGGTAAATAAAGATTAAGAATAATTCAGCCAACCTAGTGCAAGAATATGAAGGGGATGAAAGCCCCTACGCAGCGGAAGCGCATCGAAAGGACCTTACGCTATATATTAATTAACATTAAAATACCGTTACGAAACCAATTAGGTCTAGTGTTCTATTTATAGAAGAATGGCCATGAATAAAATATTCAATTAAATCAATCTTTTCAAAAATTGATTCAATCTTATTCCTTATTAAATCAATCCAAGATCAATCAATTCCATAATTGATTAATCTTTTCCACAAATGACTAATTACTTTCATAAGTGATTAGATCATTTCCATAAATGATTAGTCACTTCCATAAGTGATTAATTATTTCCATAATAGATATCCTTGTTTTTCTGCAAAAACACCAAACTAAGTCAAATTCTTAACAAAATTTGTCCTTTTATGCACAAATAAGCCTAATTTGACATACATGATTCTCAACTCCCTAATTCATCAACTATAACATTTTTTGAGCTCGGGAATAGTAAATTTGATCTAAAACATACAACTTCACTACTACAAAAACAGTTTTTAATGACAGACACAAAAAAAGAGGAGGACACTTTAATGACGGACGGAAAATGCGCGCCACTTTTAATGTCGGACGCGCGTTTTTCAATAAAAACTGACTTTTAATGACGGGCATTGCCCGTCATTAAAAACACCCTTTAATGGCGGGCATTGCCCGCCATTAAAAGCCCATTTTAATTTTTTTTTATTTTTTTAAAAAGGTAAAAAGTACCTGCCTTTTCTCTCTCCCCGAAGGCACTTCAACCCTAGCTCATTTCTTCTTCTCTCAGCCGCCACAGCTCCCTTCACCAATCTTCTTCAACAACCGCCGGCTGCCTTGGATTTTTCGTCTTCCTTCGCCGCATATTCGTATCTTCTTCAACGTTCGGCTGTTTGGACTCTTCGCTGCAGATTCCTCTCTTCCCGAAGGCGACGACTGGACGACAGTGGTAAAGCGGCACCAAACCTCGTTCGGCTGTTCCGACTCGTTTGCAAGGCGGCGACTGGTAAGGCGGCACCAAACCTCAACGACGGAGCAAGGCGGCGACTGGCAGCGTGGGTTTCGACTGAAGGCGGCGACCGGACCAAAAATATCCGACTCGTTGCGTTTCAACCTTAGCAAGGCGCCGACTGGACCAAAAGTTTGATCCACTTTTCATAGATTCAGTTCACTATTTGAACCTGGCCTTTAAGATATTCCAAGGTTTCTCAAATGGCTTTTCGAAAACCACGATTTACCCACACTTGAGATTGAGATTGTTATTACAACTTTCAAATTCTTGTTGCTCTGTGTTTGAGAAAGTATTCATTCCAAAGTTGGGGGAGAAGCATTCGCGCAACTCTGGCGACTTGGTTTTGTTGCCAGTTTTTGTACTAAACTGAGTGATACTGTCTCAAGTGAAATAGGGAAGGTGTATGGTAGAATAACGTAAGTACTACTATATCTTTACTTGGACTGGATGAAGCACTTTTTGTTATTCACTTTTGCACGCTTGTTGATATATTCAAACTTCGAAACTTTGAAATTTGAATAGCACTACGCTCACCTATATGGTCCTAGAAATTCCTAAACCATTTTTTAGATATTTGCCTAAGTTGTCAAAAGATGTTTGCATTCTTCATTGTGGTATTCCTTTTCTACTAATTATCAATTTCTTGAGTTTGTACTTTTCAGGAGAATTTTCTAACTAGTCTTTATTATATTTCCAATGTACACTATATAAGTTTATCTGTGAAATGGGAATTTATAATTTGGTTGGACCTTTTCAAATCTAGTTATATGAAGTTTTTGTTTTTTCAGTTCCTTCTTACAAACATGTTATATGTTTTACTAATGTTTCATTTATAATCAGGTACCTGGTGACAACATTTAAGGTTGTTCCTCGGGGAACAGAAGGGGCTGTCAGTCTCGAGGGAACCTTTGCTAGACTCTTAGCGGCAATCGCTCTTGCATTCGTTGGCTGTCTTTTGGGTGATGTAATTATTTATTGTTGTTCTTGCCACACTCCTGAACTATACTGCTGCTCTATCTTTTTAGAAAAAGTTCCATCTAATTTTATAATTTTCCCTTGTTCATTTTTTTTAGAGATCTTTTTCATAGACTAGCCATGCCTGAAATTTCCTAATCATCCTTTGTTCTGGTTTTTTCTTTCCAAAAGTTCAATTAATTTCAGTACATTTTTTTAATTTATAATCTACCTTAATTTCTCCTCAGCCAACCTCATGAAAAAGCTTAACTTAGCGTTGCTAGTAGTCAAGTGTTTTCCATATTTTAAGAACTCTACTGGCTAATTCCAAGCTCTTCTCAAAATTCTGAGTCCCTTCCCCCATTATATTTCTATAAAAATTACACGCTTCCTGTTATTGGATACACATTTAGATTTCTCTTTCGATGTTGATGCAGGTAACTGCACCTGAAGCAATTGTATGTGTTATAGCTTCACAGATTGCTAATCTTGGTGAAAGCATCATCGGTGTTGTCCTTCAAGAGAAGGAGGGATTTCAGTGGGTAAGTAACTGAAGTTTGTGATCCACTGATTGCCTTAATTTGATTGTGTTGTTTGTTTATAGATTTCTTCAACTGTTATTGCCTGCTCTTATGTATCATCGTCGCTTTATTCGTCAAGAACGATGAGTTTGAGTCTGAAAGTAGCTTGGCTGATAGCCTTGATTGGTTTAAATCTTAAGGCAACTGCAAAATTAGTAGGTAGATAAGAAGGATTCGGCTAAGGGTTAAAAGAACACCTAGATCAACAAAGGCTCATTTTTCTCGACCCTTCTCAGTCGACCTCTGTAGCATAATTTCATCTATAGCAATCCTACTTTTCTCGACCCTTCTCAGTCAACCCATTACTGGCCAGACGATTTTTCTGGGGTCTTCTTGGTCAGTTAATTCAATACCTTATTTCTTTGCTCTTATTTTCATATCATGATCCTTTTACTTTTGTCTTATCTGAATCTTTGGTGCAGGGCTGACCGTTGCTTCATTCTGTTATCTGCAATTCTTTCCAGCACCTTATCACATTGATGGTATGGTCCAATATCATTAAATGCTATGCAAGTAGTTCTATTTTCATATTAAATGAAGCAATAATTTGTCCATAATAAATTTATTTTTATTTTACCCAATAATCAACCTTTTAACACTTCTTCCATGTTAGTCCTACTTTTGAGTCTTTGACCAGCCTCGACATTTCTTCCAAGTTCGCTGGATTCACTCGCCTGGAAAAGAAGAGCGTGTGTGATTTGGTAATGTTATGCAATTTTAAGGTATTTGTTTCTTATCCTTTTTTTTCTTTTTTGAAAAGTTTTGTTTCTTAATCCTTATTCTTCTTTTTAGTTGGTCTTTTTACTTGGTTGATTGATTGAAGATGTTTTTAACTTTTCATATGTGGGAAGTGGCAGTGATTTTTGGAATTGTTACTCACATGGTGCAAGAGTTTAAACCCTTAGTTCCGAATTTGTTAATTAATTAACTATGCTTGTGCTTAAGTTGGCAAAGAATGAACATTCAAAAAAAAAAAAGTCGGCAAAGAATGAGAGTTCTTGGCTGGCATATATACTCGGTAAATTTTAGAGAAGAAATTTAAAGAGAAGTAGATAAAAGTTTAGAGAAGTAGAGATATAAAGATAAATTGGAGGGAAAAATTTAGATATGGAAATTTGAGAAATTCCAAAGCTTCATAACAAGATAAGTTAGTTCAATAAGTTAGTCTTGTTTACTTTTAAGTTCACAATTCAGCGACGTGCCTAATACAACAAAGATCAAGCTGCAACAAAGACTTTTTCTACAGTAAAAAATGGCTGGAAGCTGCTGAAGGTATGTATGATAAATGGTTCAAGGATACTAGACTTGCTACTTTGCATAGCTCCTCTGTATTTCATTATTCTTTCAGTTTGGTAGCTCTGTTGTTAGCTCCTCTTTTTCTTTTTGAAAAAACAGGCTTTTCTCCATTGTCTTTAGCTTGAAAGGCTCGTCTTTGCTTCTACTCGTTAAAGGGAAGTGACTTTGAGAATTTGGTCATTAAAGTTTCTGTATGTCATGTCCAATTACGTTGCAGACAAGTTTGCTCCCGATGCAAACAACAAGGTTTGTTTATAAATCTTGGTTCTTATCTATTTCTCCACCAATGCAGTGCTTAGAAACACAAGCTTGCTGTTTAATTTATTTTCTTTGCCACATGATGAAGATTGAATGGCTTAATATTTGTTTTCCTTTGCATTCTTGATTGCAAGTTTCATATGGAGGCTTGGTTTCTTGGTTAGATTTCTGCTGGAGTTCTTATTTTCCTCTCTGAGTTTTTACTTTCTTGAGCTCTTAATTACTTTTACTAATAGAACATTGTTGTAATCTCAGAATCTGTTGTGAACATATACCTGGTTGAAACCCCAAACTGAATTGTAAGGGAAAAAGTTTGAGGGTAAGAAAGATTTTGCGGTTCGTATCTTGTTTCCTTTGCATCCTTTCTTGTTCATTTTGATAATAATTGTTTGGTTATTGCAGTGACGTTGTAAACTTCTCTAACTTCCTTTTCATTTCAAACTTTCTTATTTGAATGCAAAATATGTTTATGTTTGTATCCCTTTTCGTTTCGTGTGGCTTTTTACGTGTTGCTTACTTTGTTCTTCATCTTGGCTCACATATTGAATACCTTGTTGGTTTGCATTGACAGTGGTTTGGACTTGGGGAAGATCAAGTGCTAGTTCTTGTGCAAAAAAAATGACTATCGGCTTAAGTATTAACAGACTGCTCCTTAAGTGAAGGATTACAAGGTCAACTCTTTCTTTCATATTTTGTTGATACGTTTGCATGAGATAGTGCTCAAATTTTTTGGGTGTTGATAGATGGGGTGCATGTAGTAGTTTCTTTTGTTGTGATTCTGCTGGAATTTTGCTTTGTTTATGTTATTGAAGAATTGTTTTACTTGGGAGCTTATTGCGATTTTGATGAAATTTTAGGTTAGAACTAACTATTGTACTGAAGTATAGGAGCGAACATACTTCAGTACAAATTTCCTTTTTCTGGAACCATATTGATGGGGTTGACAATGATTGAACTCTTTGTTATATTTCTTCATATTATTTTGTTGACTATCTTGCAATGTCCTTTAATGATTGTTTAGATTTAGGTTGTGCTTGATGCTTTGAGGATACAATTTTTGTCCTAATGTGGTCTTGCAGGATTCAGACTCTAACACTGAGGAACTTGAATTGTTGGATCCATCACCTGCATTAAATTTTTGTGTCATGTTTTGTCGAGGTGTGCTTAGTTAGCTCAAACACACTTATTAGTTTTTCATATGCTTAGTTTTTTTTCAAATATTTGTTTTTCTTAGGTTCTTCAAGTTTGATGTACGAGCAAGATTATGGTGACAGGAATGAAAGCGGCATGTACGAGAATTTTTGTTTTTTAGTGTAG

mRNA sequence

ATGTCGTCGCAATTCAATTGCAATTTCAAACAAACAAAAACAGGTAAAAAGTACCTGCCTTTTCTCTCTCCCCGAAGGCACTTCAACCCTAGCTCATTTCTTCTTCTCTCAGCCGCCACAGCTCCCTTCACCAATCTTCTTCAACAACCGCCGGCTGCCTTGGATTTTTCGTCTTCCTTCGCCGCATATTCGTATCTTCTTCAACGTTCGGCTGTTTGGACTCTTCGCTGCAGATTCCTCTCTTCCCGAAGGCGACGACTGGACGACAGTGGTAAAGCGGCACCAAACCTCGTTCGGCTGTTCCGACTCGTTTGCAAGGCGGCGACTGGTAAGGCGGCACCAAACCTCAACGACGGAGCAAGGCGGCGACTGGCAGCTATTCATTCCAAAGTTGGGGGAGAAGCATTCGCGCAACTCTGGCGACTTGGTTTTGTTGCCAGTTTTTGTACTAAACTGAGTGATACTGTCTCAAGTGAAATAGGGAAGGTGTATGGTAGAATAACGTACCTGGTGACAACATTTAAGGTTGTTCCTCGGGGAACAGAAGGGGCTGTCAGTCTCGAGGGAACCTTTGCTAGACTCTTAGCGGCAATCGCTCTTGCATTCGTTGGCTGTCTTTTGGGTGATGTAACTGCACCTGAAGCAATTGTATGTGTTATAGCTTCACAGATTGCTAATCTTGGTGAAAGCATCATCGGTGTTGTCCTTCAAGAGAAGGAGGGATTTCAGTGGATTTCTTCAACTGTTATTGCCTGCTCTTATGTATCATCGTCGCTTTATTCGTCAAGAACGATGAGTTTGAGTCTGAAAGTAGCTTGGCTGATAGCCTTGATTGGTTTAAATCTTAAGGCAACTGCAAAATTAGTAGGGCTGACCGTTGCTTCATTCTGTTATCTGCAATTCTTTCCAGCACCTTATCACATTGATGCGACGTGCCTAATACAACAAAGATCAAGCTGCAACAAAGACTTTTTCTACAGTAAAAAATGGCTGGAAGCTGCTGAAGACAAGTTTGCTCCCGATGCAAACAACAAGGATTCAGACTCTAACACTGAGGAACTTGAATTGTTGGATCCATCACCTGCATTAAATTTTTGTGTCATGTTTTGTCGAGGTTCTTCAAGTTTGATGTACGAGCAAGATTATGGTGACAGGAATGAAAGCGGCATGTACGAGAATTTTTGTTTTTTAGTGTAG

Coding sequence (CDS)

ATGTCGTCGCAATTCAATTGCAATTTCAAACAAACAAAAACAGGTAAAAAGTACCTGCCTTTTCTCTCTCCCCGAAGGCACTTCAACCCTAGCTCATTTCTTCTTCTCTCAGCCGCCACAGCTCCCTTCACCAATCTTCTTCAACAACCGCCGGCTGCCTTGGATTTTTCGTCTTCCTTCGCCGCATATTCGTATCTTCTTCAACGTTCGGCTGTTTGGACTCTTCGCTGCAGATTCCTCTCTTCCCGAAGGCGACGACTGGACGACAGTGGTAAAGCGGCACCAAACCTCGTTCGGCTGTTCCGACTCGTTTGCAAGGCGGCGACTGGTAAGGCGGCACCAAACCTCAACGACGGAGCAAGGCGGCGACTGGCAGCTATTCATTCCAAAGTTGGGGGAGAAGCATTCGCGCAACTCTGGCGACTTGGTTTTGTTGCCAGTTTTTGTACTAAACTGAGTGATACTGTCTCAAGTGAAATAGGGAAGGTGTATGGTAGAATAACGTACCTGGTGACAACATTTAAGGTTGTTCCTCGGGGAACAGAAGGGGCTGTCAGTCTCGAGGGAACCTTTGCTAGACTCTTAGCGGCAATCGCTCTTGCATTCGTTGGCTGTCTTTTGGGTGATGTAACTGCACCTGAAGCAATTGTATGTGTTATAGCTTCACAGATTGCTAATCTTGGTGAAAGCATCATCGGTGTTGTCCTTCAAGAGAAGGAGGGATTTCAGTGGATTTCTTCAACTGTTATTGCCTGCTCTTATGTATCATCGTCGCTTTATTCGTCAAGAACGATGAGTTTGAGTCTGAAAGTAGCTTGGCTGATAGCCTTGATTGGTTTAAATCTTAAGGCAACTGCAAAATTAGTAGGGCTGACCGTTGCTTCATTCTGTTATCTGCAATTCTTTCCAGCACCTTATCACATTGATGCGACGTGCCTAATACAACAAAGATCAAGCTGCAACAAAGACTTTTTCTACAGTAAAAAATGGCTGGAAGCTGCTGAAGACAAGTTTGCTCCCGATGCAAACAACAAGGATTCAGACTCTAACACTGAGGAACTTGAATTGTTGGATCCATCACCTGCATTAAATTTTTGTGTCATGTTTTGTCGAGGTTCTTCAAGTTTGATGTACGAGCAAGATTATGGTGACAGGAATGAAAGCGGCATGTACGAGAATTTTTGTTTTTTAGTGTAG

Protein sequence

MSSQFNCNFKQTKTGKKYLPFLSPRRHFNPSSFLLLSAATAPFTNLLQQPPAALDFSSSFAAYSYLLQRSAVWTLRCRFLSSRRRRLDDSGKAAPNLVRLFRLVCKAATGKAAPNLNDGARRRLAAIHSKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLGESIIGVVLQEKEGFQWISSTVIACSYVSSSLYSSRTMSLSLKVAWLIALIGLNLKATAKLVGLTVASFCYLQFFPAPYHIDATCLIQQRSSCNKDFFYSKKWLEAAEDKFAPDANNKDSDSNTEELELLDPSPALNFCVMFCRGSSSLMYEQDYGDRNESGMYENFCFLV

Homology

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BLAST of Lag0015711 vs. NCBI nr
Match: XP_022142893.1 (protein VTE6, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 218.0 bits (554), Expect = 1.5e-52
Identity = 111/122 (90.98%), Postives = 117/122 (95.90%), Query Frame = 0


Query: 129 SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLE 188
           +KVGGEAF QLWRLGFVASFCTKLSDTVSSEIGK YGRITYLVTTFKVVPRGTEGAVSLE
Sbjct: 175 NKVGGEAFTQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLE 234

Query: 189 GTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLGESIIGVVLQEKEGFQWISST 248
           GTFA LLAAIAL+FVGCLLGDVTAPEAIVCVIASQIANLGESIIG VLQEKEGFQW+++ 
Sbjct: 235 GTFAGLLAAIALSFVGCLLGDVTAPEAIVCVIASQIANLGESIIGAVLQEKEGFQWLNND 294

Query: 249 VI 251
           V+
Sbjct: 295 VV 296

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BLAST of Lag0015711 vs. NCBI nr
Match: XP_038876750.1 (protein VTE6, chloroplastic [Benincasa hispida])

HSP 1 Score: 216.9 bits (551), Expect = 3.3e-52
Identity = 111/122 (90.98%), Postives = 116/122 (95.08%), Query Frame = 0


Query: 129 SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLE 188
           +KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGK YGRITYLVTTFKVVPRGTEGAVSLE
Sbjct: 170 NKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLE 229

Query: 189 GTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLGESIIGVVLQEKEGFQWISST 248
           GTFA LLAAIALAFV CLLGDVTAPE IVCVIASQIANLGESIIG VLQEKEGFQW+++ 
Sbjct: 230 GTFAGLLAAIALAFVACLLGDVTAPEVIVCVIASQIANLGESIIGAVLQEKEGFQWLNND 289

Query: 249 VI 251
           V+
Sbjct: 290 VV 291

[Close]

BLAST of Lag0015711 vs. NCBI nr
Match: XP_031740533.1 (protein VTE6, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 215.7 bits (548), Expect = 7.2e-52
Identity = 111/122 (90.98%), Postives = 116/122 (95.08%), Query Frame = 0


Query: 129 SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLE 188
           +KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGK YGRITYLVT FKVVPRGTEGAVSLE
Sbjct: 81  NKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTNFKVVPRGTEGAVSLE 140

Query: 189 GTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLGESIIGVVLQEKEGFQWISST 248
           GTFA LLAAIALAFVGCLLGDVTA EAIVCVIASQIANLGESIIG VLQEKEGFQW+++ 
Sbjct: 141 GTFAGLLAAIALAFVGCLLGDVTASEAIVCVIASQIANLGESIIGAVLQEKEGFQWLNND 200

Query: 249 VI 251
           V+
Sbjct: 201 VV 202

[Close]

BLAST of Lag0015711 vs. NCBI nr
Match: XP_004137222.1 (protein VTE6, chloroplastic isoform X1 [Cucumis sativus] >KGN53585.1 hypothetical protein Csa_015244 [Cucumis sativus])

HSP 1 Score: 215.7 bits (548), Expect = 7.2e-52
Identity = 111/122 (90.98%), Postives = 116/122 (95.08%), Query Frame = 0


Query: 129 SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLE 188
           +KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGK YGRITYLVT FKVVPRGTEGAVSLE
Sbjct: 170 NKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTNFKVVPRGTEGAVSLE 229

Query: 189 GTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLGESIIGVVLQEKEGFQWISST 248
           GTFA LLAAIALAFVGCLLGDVTA EAIVCVIASQIANLGESIIG VLQEKEGFQW+++ 
Sbjct: 230 GTFAGLLAAIALAFVGCLLGDVTASEAIVCVIASQIANLGESIIGAVLQEKEGFQWLNND 289

Query: 249 VI 251
           V+
Sbjct: 290 VV 291

[Close]

BLAST of Lag0015711 vs. NCBI nr
Match: KAA0059051.1 (protein VTE6 [Cucumis melo var. makuwa])

HSP 1 Score: 211.5 bits (537), Expect = 1.4e-50
Identity = 108/122 (88.52%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 129 SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLE 188
           +KVGGEAF+QLWRLGFVASFCTKLSDTVSSEIGK YGRITYLVT FKVVPRGTEGAVSLE
Sbjct: 456 NKVGGEAFSQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTNFKVVPRGTEGAVSLE 515

Query: 189 GTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLGESIIGVVLQEKEGFQWISST 248
           GTFA LLAAI LA  GCLLGDVTAPEAIVCVIASQIANLGESIIG VLQEKEGFQW+++ 
Sbjct: 516 GTFAGLLAAITLASAGCLLGDVTAPEAIVCVIASQIANLGESIIGAVLQEKEGFQWLNND 575

Query: 249 VI 251
           V+
Sbjct: 576 VV 577

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BLAST of Lag0015711 vs. ExPASy Swiss-Prot
Match: Q9SYM0 (Protein VTE6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VTE6 PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 3.7e-43
Identity = 87/121 (71.90%), Postives = 104/121 (85.95%), Query Frame = 0


Query: 130 KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEG 189
           +VGG AF+QL+RLGFV+SFCTK+SDTVSSEIGK YG+ TYL TTFK+VPRGTEGA+SLEG
Sbjct: 188 QVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVPRGTEGAMSLEG 247

Query: 190 TFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLGESIIGVVLQEKEGFQWISSTV 249
           T A LLA+  LA VGC LG +T PEA VCV+ASQIANLGESIIG   Q+KEGF+W+++ V
Sbjct: 248 TLAGLLASFFLASVGCFLGQITPPEAAVCVLASQIANLGESIIGASFQDKEGFKWLNNDV 307

Query: 250 I 251
           +
Sbjct: 308 V 308

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BLAST of Lag0015711 vs. ExPASy Swiss-Prot
Match: P73555 (Uncharacterized membrane protein sll0875 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sll0875 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.3e-19
Identity = 82/223 (36.77%), Postives = 116/223 (52.02%), Query Frame = 0


Query: 31  SSFLLLSAATAPFTNLLQQPPAALDFSSSFAAYSYLLQRSAVWTLRCRFLSSRRRRLDDS 90
           +SFLL  AA AP   LL        +      ++ L  R  +  L   F+ S   R+   
Sbjct: 25  NSFLLALAAIAP-KKLLTPWGYGHAWVLGVIIWAALGWRGYLVVLAYFFVGSAVTRIGQK 84

Query: 91  GKAAPNLVRLFRLVCKAATGKAAPN--LNDGARRRLAAIHSKVGGEAFAQLW-RLGFVAS 150
            K A         + +  +G+  P           L A+    G E + QLW  LG+VAS
Sbjct: 85  EKEAAG-------IAEKRSGQRGPENVWGSALTAALCALAIAFGPEPW-QLWLALGYVAS 144

Query: 151 FCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALAFVGCLL 210
           F TKLSDT +SE+GK YG+ T+L+TT + VPRGTEGAVS+EGT A   A +ALA +G  +
Sbjct: 145 FSTKLSDTTASEVGKAYGKNTFLITTLQPVPRGTEGAVSVEGTLAGFAAGLALAVLGYGV 204

Query: 211 GDVTAPEAIVCVIASQIANLGESIIGVVLQEKEGFQWISSTVI 251
           G ++    I   +A+ IA   ES+IG  LQ K  + W+++ V+
Sbjct: 205 GLISFGGIIFSTLAAFIATNLESVIGATLQNK--WPWLTNEVV 236

[Close]

BLAST of Lag0015711 vs. ExPASy Swiss-Prot
Match: Q58343 (Uncharacterized membrane protein MJ0933 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0933 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.7e-09
Identity = 38/100 (38.00%), Postives = 62/100 (62.00%), Query Frame = 0


Query: 142 LGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEGTFARLLAAIALA 201
           +G+++S     SDT SSE+G +      L+TTF+VV +GT+GA+++ GT A +L A  + 
Sbjct: 115 IGYISSIAAATSDTFSSELGILSNEKPRLITTFEVVEKGTDGAITIFGTLAGVLGAFLIG 174

Query: 202 FVGCLL-GDVTAPEAIVCVIASQIA-NLGESIIGVVLQEK 240
             G LL GD+   + ++C  A  IA NL +S++G + + K
Sbjct: 175 LFGYLLFGDI---KIVLCGTAGGIAGNLADSLVGALFERK 211

[Close]

BLAST of Lag0015711 vs. ExPASy TrEMBL
Match: A0A6J1CPE4 (protein VTE6, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012898 PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 7.1e-53
Identity = 111/122 (90.98%), Postives = 117/122 (95.90%), Query Frame = 0


Query: 129 SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLE 188
           +KVGGEAF QLWRLGFVASFCTKLSDTVSSEIGK YGRITYLVTTFKVVPRGTEGAVSLE
Sbjct: 175 NKVGGEAFTQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLE 234

Query: 189 GTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLGESIIGVVLQEKEGFQWISST 248
           GTFA LLAAIAL+FVGCLLGDVTAPEAIVCVIASQIANLGESIIG VLQEKEGFQW+++ 
Sbjct: 235 GTFAGLLAAIALSFVGCLLGDVTAPEAIVCVIASQIANLGESIIGAVLQEKEGFQWLNND 294

Query: 249 VI 251
           V+
Sbjct: 295 VV 296

[Close]

BLAST of Lag0015711 vs. ExPASy TrEMBL
Match: A0A0A0KVG7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G083590 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 3.5e-52
Identity = 111/122 (90.98%), Postives = 116/122 (95.08%), Query Frame = 0


Query: 129 SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLE 188
           +KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGK YGRITYLVT FKVVPRGTEGAVSLE
Sbjct: 170 NKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTNFKVVPRGTEGAVSLE 229

Query: 189 GTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLGESIIGVVLQEKEGFQWISST 248
           GTFA LLAAIALAFVGCLLGDVTA EAIVCVIASQIANLGESIIG VLQEKEGFQW+++ 
Sbjct: 230 GTFAGLLAAIALAFVGCLLGDVTASEAIVCVIASQIANLGESIIGAVLQEKEGFQWLNND 289

Query: 249 VI 251
           V+
Sbjct: 290 VV 291

[Close]

BLAST of Lag0015711 vs. ExPASy TrEMBL
Match: A0A5A7UZZ0 (Protein VTE6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold233G00770 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 6.6e-51
Identity = 108/122 (88.52%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 129 SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLE 188
           +KVGGEAF+QLWRLGFVASFCTKLSDTVSSEIGK YGRITYLVT FKVVPRGTEGAVSLE
Sbjct: 456 NKVGGEAFSQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTNFKVVPRGTEGAVSLE 515

Query: 189 GTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLGESIIGVVLQEKEGFQWISST 248
           GTFA LLAAI LA  GCLLGDVTAPEAIVCVIASQIANLGESIIG VLQEKEGFQW+++ 
Sbjct: 516 GTFAGLLAAITLASAGCLLGDVTAPEAIVCVIASQIANLGESIIGAVLQEKEGFQWLNND 575

Query: 249 VI 251
           V+
Sbjct: 576 VV 577

[Close]

BLAST of Lag0015711 vs. ExPASy TrEMBL
Match: A0A5D3CWL7 (Protein VTE6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00320 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 6.6e-51
Identity = 108/122 (88.52%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 129 SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLE 188
           +KVGGEAF+QLWRLGFVASFCTKLSDTVSSEIGK YGRITYLVT FKVVPRGTEGAVSLE
Sbjct: 170 NKVGGEAFSQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTNFKVVPRGTEGAVSLE 229

Query: 189 GTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLGESIIGVVLQEKEGFQWISST 248
           GTFA LLAAI LA  GCLLGDVTAPEAIVCVIASQIANLGESIIG VLQEKEGFQW+++ 
Sbjct: 230 GTFAGLLAAITLASAGCLLGDVTAPEAIVCVIASQIANLGESIIGAVLQEKEGFQWLNND 289

Query: 249 VI 251
           V+
Sbjct: 290 VV 291

[Close]

BLAST of Lag0015711 vs. ExPASy TrEMBL
Match: A0A1S3BTA9 (protein VTE6, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492936 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 6.6e-51
Identity = 108/122 (88.52%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 129 SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLE 188
           +KVGGEAF+QLWRLGFVASFCTKLSDTVSSEIGK YGRITYLVT FKVVPRGTEGAVSLE
Sbjct: 170 NKVGGEAFSQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTNFKVVPRGTEGAVSLE 229

Query: 189 GTFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLGESIIGVVLQEKEGFQWISST 248
           GTFA LLAAI LA  GCLLGDVTAPEAIVCVIASQIANLGESIIG VLQEKEGFQW+++ 
Sbjct: 230 GTFAGLLAAITLASAGCLLGDVTAPEAIVCVIASQIANLGESIIGAVLQEKEGFQWLNND 289

Query: 249 VI 251
           V+
Sbjct: 290 VV 291

[Close]

BLAST of Lag0015711 vs. TAIR 10
Match: AT1G78620.1 (Protein of unknown function DUF92, transmembrane )

HSP 1 Score: 177.2 bits (448), Expect = 2.7e-44
Identity = 87/121 (71.90%), Postives = 104/121 (85.95%), Query Frame = 0


Query: 130 KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEG 189
           +VGG AF+QL+RLGFV+SFCTK+SDTVSSEIGK YG+ TYL TTFK+VPRGTEGA+SLEG
Sbjct: 188 QVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVPRGTEGAMSLEG 247

Query: 190 TFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLGESIIGVVLQEKEGFQWISSTV 249
           T A LLA+  LA VGC LG +T PEA VCV+ASQIANLGESIIG   Q+KEGF+W+++ V
Sbjct: 248 TLAGLLASFFLASVGCFLGQITPPEAAVCVLASQIANLGESIIGASFQDKEGFKWLNNDV 307

Query: 250 I 251
           +
Sbjct: 308 V 308

[Close]

BLAST of Lag0015711 vs. TAIR 10
Match: AT1G78620.2 (Protein of unknown function DUF92, transmembrane )

HSP 1 Score: 177.2 bits (448), Expect = 2.7e-44
Identity = 87/121 (71.90%), Postives = 104/121 (85.95%), Query Frame = 0


Query: 130 KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKVYGRITYLVTTFKVVPRGTEGAVSLEG 189
           +VGG AF+QL+RLGFV+SFCTK+SDTVSSEIGK YG+ TYL TTFK+VPRGTEGA+SLEG
Sbjct: 197 QVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVPRGTEGAMSLEG 256

Query: 190 TFARLLAAIALAFVGCLLGDVTAPEAIVCVIASQIANLGESIIGVVLQEKEGFQWISSTV 249
           T A LLA+  LA VGC LG +T PEA VCV+ASQIANLGESIIG   Q+KEGF+W+++ V
Sbjct: 257 TLAGLLASFFLASVGCFLGQITPPEAAVCVLASQIANLGESIIGASFQDKEGFKWLNNDV 316

Query: 250 I 251
           +
Sbjct: 317 V 317

The following BLAST results are available for this feature:

BLAST of Lag0015711 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142893.1	1.5e-52	90.98	protein VTE6, chloroplastic isoform X1 [Momordica charantia]	[more]
XP_038876750.1	3.3e-52	90.98	protein VTE6, chloroplastic [Benincasa hispida]	[more]
XP_031740533.1	7.2e-52	90.98	protein VTE6, chloroplastic isoform X2 [Cucumis sativus]	[more]
XP_004137222.1	7.2e-52	90.98	protein VTE6, chloroplastic isoform X1 [Cucumis sativus] >KGN53585.1 hypothetica...	[more]
KAA0059051.1	1.4e-50	88.52	protein VTE6 [Cucumis melo var. makuwa]	[more]

BLAST of Lag0015711 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYM0	3.7e-43	71.90	Protein VTE6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VTE6 PE=1 SV=1	[more]
P73555	1.3e-19	36.77	Uncharacterized membrane protein sll0875 OS=Synechocystis sp. (strain PCC 6803 /...	[more]
Q58343	2.7e-09	38.00	Uncharacterized membrane protein MJ0933 OS=Methanocaldococcus jannaschii (strain...	[more]

BLAST of Lag0015711 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CPE4	7.1e-53	90.98	protein VTE6, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A0A0KVG7	3.5e-52	90.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G083590 PE=3 SV=1	[more]
A0A5A7UZZ0	6.6e-51	88.52	Protein VTE6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold233G00770 P...	[more]
A0A5D3CWL7	6.6e-51	88.52	Protein VTE6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00320 PE...	[more]
A0A1S3BTA9	6.6e-51	88.52	protein VTE6, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492936 PE=3 SV=1	[more]

BLAST of Lag0015711 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78620.1	2.7e-44	71.90	Protein of unknown function DUF92, transmembrane	[more]
AT1G78620.2	2.7e-44	71.90	Protein of unknown function DUF92, transmembrane	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002794	Protein of unknown function DUF92, TMEM19	PFAM	PF01940	DUF92	coord: 128..239 e-value: 3.0E-24 score: 85.8
IPR002794	Protein of unknown function DUF92, TMEM19	PANTHER	PTHR13353	TRANSMEMBRANE PROTEIN 19	coord: 129..239
None	No IPR available	PANTHER	PTHR13353:SF5	TRANSMEMBRANE PROTEIN 19	coord: 129..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0015711.1	Lag0015711.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane