Lag0015638 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0015638
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionDUF4283 domain-containing protein
Locationchr12: 18363458 .. 18365920 (+)
RNA-Seq ExpressionLag0015638
SyntenyLag0015638
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGAAGACTATCCTAAAGGAGATCCATGGTTCAACAGCTCTCCGTCACGCGTTCTGTACACCTTTACCTCGACTTGCAGTTGTATGTAAGGGAAAAGAATGAATATTTAAGAAAATACTCAGTAAGTAGCAATACTTCGAGACACTTGCAACAATAAAAGTTTTAATATCTTATTCGAGTTAAGGGCCTAAGTGTTAGGTCATCTCATTCTCATTCATTTCATTTCATTTCATTTCATTTATCTGTAGTCCGGGTCTGGTGTTCAATTAGTACACCTATATACATATAAGTTTGCCAACTCACTGATAGTGCACAAGTCTGAGTTTTGGGAGGTCTCTACTCCTACTGATGGTAGATGGCACCCAGTCAGTGGAGCTAAGTCTCGTCCCTCAAGGCACTAATGGGCGCGTAGCGCTCTGAACTACCATTTCACTAGTGGGGCATTCATGGGTTTAAGTCAGAAATTAACTTCCACAGTTAGTAAATGGCACCTAGACTGTGAAGCCAAGTCCCGCCCATTAAGCCCCTCATTTCAGTCTATTACATCTCAGTCCTAGGTGTTTAATTGACACGACCCACAATCGAGGCTACTAGCCTATCCTTTTCCCTTTCTTAATCCTTTACCCTTTAGAACCCCTTAACCCTTGCTATTTTAAAGGCAACCCTCCTAAATAGAGAAAAACACAAACTCCCAGTTGTCCACAACAATTCTAGCCAGCCACAAAATATACATCAGACACGCATTCGCTTCTATCACACAACACATATATGCAGTAGCTATATTCTCGAAATTAACGCAACATATCACCTCAATCTCAATCCAAACAACATATACACATTCTCATGCCAAGAACACATCAGTCATTTCAACGCTTAATAGAGTTTAATCTAGCAAGTTACTTACCATGTTCAGCTACCATACAATGCATTTAAAACTTGGAATTTGAATCCAATTAGCTACTTAAATTCCAAGGGCAACTTAAGGGTTTAATCCAACCCATGCTATCATAAGCCACACTCAACTTAAATGAGTTTTAAAGCACATAATTTATTCCAAAGGGCTACTTACCTTAGTGAATGAGATATTTGATTAACCTTCAAGAAATTCCTTAACTCCAAGGTTCTTAAGCAACTACAACAAGGAAAGAACCTTTAATTAAAATAGGGACTCTAATCCAAGCATTCAACTATGAACCCATTTAAATTTGAGGGTAAATTAACACCCAAAACTCACCCAAAACAGAAACACCGCTTGCTGTCCAACTTCCAAGTTTCGCTCCGCCTTTGACGATTCGACCACCACCTAATACTACCTTAGATTAAGATCCAACATTAATGGGCATTTCATTAAGGCATGAAAGATCAATAAGCTTTGGCTTACAACTCCCTTACCCAAAATAATTCTTTAGAAGCAAAGCTGAAGCTTCGAGTGACGGCGACGAACAGATCTGAAAAAGCGAACGAGCCCGAGGACGGCAGTGGCTGCTCAAATCGACGGCGGTTGGCGACGTCTCGGCGGCAGCAGAGCTCGATGGCGAGAGGCGGGCTGCAGGCTGAAAGAGGGAGAGAGAGTTGCGAGTGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAAAGAGAAGGAAAGATAAAACGAAACGGGAGGGAGAGACAAGAAACTCACCGTCGGCGAGCAGCAGCGACGGAGGCGCGACGGCTGTACTGCGGCGGCAGCGATGGAGTTGCGACGGCAGAGAGAGGCCGAGGGTGAGAGATGACCGAGAGGGAGAGAGGGGAGAGACCAAATGGAGGGGGCTGTGAGAGAGAGAAAGAATCGTGAGAGGGAGAGAGAGAAAGCTCAAACTTTTTTTTCTTTTTTTTTTTAAAAAAATGGTCATTTGACCGAATTTGGGGGGAAGTTTCCCCCCATTTCTCTTTTTCCCCTTTTTGACCGGGCCTTTAATGCCCACTTTCTCTTTTTTTCCAAATGCTTGTCGTTACAAAAGCTATTAGTGGCCATCTGAGCGGTCGGGACCGAAAAAGATTGTTGTTGGAGTGTTTGAGATTGACAACATAAGTGCACTTCAGGCCCAGATGTCTTCCCTTGCTAATGCTTTTCTGAAATTTTCAGGTACAGGGAGTGTTCAATCAATCGAGTCTGCAGCTGTCCTTGCATCCCAGACTCAGGAAGAAAATATCGAGCAGGTTCAGTATGTGTCAAATTATAATTATAGGGGGTATAATAATAATTCTACACCTACACATTATCATCCTAGTAATAGAAATCATGAGAATTTTTCCTATGCTAATAATAAGAATGTGTTGAACCCTCCTGACTTTACTCCTAACCAAGAAAGTAAACAATCTTTAGAGGATCTTGTTGGAGCTTTTATTGTAGAATCAAGTAACAGGTCAAATAAGCTCGAGGAAGTCGTGATTGCCATAAACACCACTGTCAATGGTCATTCTGTAGCCATCTAG

mRNA sequence

ATGCGGAAGACTATCCTAAAGGAGATCCATGGTTCAACAGCTCTCCGTCACGCGTTCTGTACACCTTTACCTCGACTTGCAGTTTCCGGGTCTGGTGTTCAATTAGTACACCTATATACATATAAGTTTGCCAACTCACTGATAGTGCACAAGTCTGAGTTTTGGGAGGTCTCTACTCCTACTGATGAAGCAAAGCTGAAGCTTCGAGTGACGGCGACGAACAGATCTGAAAAAGCGAACGAGCCCGAGGACGGCAGTGGCTGCTCAAATCGACGGCGGTTGGCGACGTCTCGGCGGCAGCAGAGCTCGATGGCGAGAGGCGGGCTGCAGGCTGAAAGAGGGAGAGAGAGTTGCGAAGACAAGAAACTCACCGTCGGCGAGCAGCAGCGACGGAGGCGCGACGGCTGTACTGCGGCGGCAGCGATGGAGTTGCGACGGCAGAGAGAGGCCGAGGGTACAGGGAGTGTTCAATCAATCGAGTCTGCAGCTGTCCTTGCATCCCAGACTCAGGAAGAAAATATCGAGCAGGTTCAGTATGTGTCAAATTATAATTATAGGGGGTATAATAATAATTCTACACCTACACATTATCATCCTAGTAATAGAAATCATGAGAATTTTTCCTATGCTAATAATAAGAATGTGTTGAACCCTCCTGACTTTACTCCTAACCAAGAAAGTAAACAATCTTTAGAGGATCTTGTTGGAGCTTTTATTGTAGAATCAAGTAACAGGTCAAATAAGCTCGAGGAAGTCGTGATTGCCATAAACACCACTGTCAATGGTCATTCTGTAGCCATCTAG

Coding sequence (CDS)

ATGCGGAAGACTATCCTAAAGGAGATCCATGGTTCAACAGCTCTCCGTCACGCGTTCTGTACACCTTTACCTCGACTTGCAGTTTCCGGGTCTGGTGTTCAATTAGTACACCTATATACATATAAGTTTGCCAACTCACTGATAGTGCACAAGTCTGAGTTTTGGGAGGTCTCTACTCCTACTGATGAAGCAAAGCTGAAGCTTCGAGTGACGGCGACGAACAGATCTGAAAAAGCGAACGAGCCCGAGGACGGCAGTGGCTGCTCAAATCGACGGCGGTTGGCGACGTCTCGGCGGCAGCAGAGCTCGATGGCGAGAGGCGGGCTGCAGGCTGAAAGAGGGAGAGAGAGTTGCGAAGACAAGAAACTCACCGTCGGCGAGCAGCAGCGACGGAGGCGCGACGGCTGTACTGCGGCGGCAGCGATGGAGTTGCGACGGCAGAGAGAGGCCGAGGGTACAGGGAGTGTTCAATCAATCGAGTCTGCAGCTGTCCTTGCATCCCAGACTCAGGAAGAAAATATCGAGCAGGTTCAGTATGTGTCAAATTATAATTATAGGGGGTATAATAATAATTCTACACCTACACATTATCATCCTAGTAATAGAAATCATGAGAATTTTTCCTATGCTAATAATAAGAATGTGTTGAACCCTCCTGACTTTACTCCTAACCAAGAAAGTAAACAATCTTTAGAGGATCTTGTTGGAGCTTTTATTGTAGAATCAAGTAACAGGTCAAATAAGCTCGAGGAAGTCGTGATTGCCATAAACACCACTGTCAATGGTCATTCTGTAGCCATCTAG

Protein sequence

MRKTILKEIHGSTALRHAFCTPLPRLAVSGSGVQLVHLYTYKFANSLIVHKSEFWEVSTPTDEAKLKLRVTATNRSEKANEPEDGSGCSNRRRLATSRRQQSSMARGGLQAERGRESCEDKKLTVGEQQRRRRDGCTAAAAMELRRQREAEGTGSVQSIESAAVLASQTQEENIEQVQYVSNYNYRGYNNNSTPTHYHPSNRNHENFSYANNKNVLNPPDFTPNQESKQSLEDLVGAFIVESSNRSNKLEEVVIAINTTVNGHSVAI
Homology
BLAST of Lag0015638 vs. NCBI nr
Match: PON44675.1 (hypothetical protein TorRG33x02_330330, partial [Trema orientale])

HSP 1 Score: 79.3 bits (194), Expect = 5.4e-11
Identity = 50/94 (53.19%), Postives = 64/94 (68.09%), Query Frame = 0

Query: 173 NIEQVQYVS--NYNYRGYN-NNSTPTHYHPSNRNHENFSYANNKNVLNPPD--FTPNQES 232
           ++EQV Y++  N+NY+G N +N+ PTHYHPS RNHENFSYANN+NVL PP     P  E 
Sbjct: 96  DLEQVNYLNNQNFNYQGNNMSNNLPTHYHPSLRNHENFSYANNRNVLQPPPGLNLPVVEK 155

Query: 233 KQSLEDLVGAFIVESSNRSNKLEEVVIAINTTVN 262
           K SLED++  FI+E+  R NK E  +  I T  N
Sbjct: 156 KPSLEDILSTFILETRGRFNKDEARLDNIETHCN 189

BLAST of Lag0015638 vs. NCBI nr
Match: XP_024020480.1 (uncharacterized protein LOC112091333 [Morus notabilis])

HSP 1 Score: 77.0 bits (188), Expect = 2.7e-10
Identity = 55/126 (43.65%), Postives = 73/126 (57.94%), Query Frame = 0

Query: 138 AAAAMELRRQREAEGTGSVQSIESAAVLASQTQEENIEQVQYVSNYNYRGYNNNSTPTHY 197
           +A + ++      E + S +++  A+ L +Q  E   EQVQ+V+N N+  Y  N  P HY
Sbjct: 249 SALSNQIAALTNREASSSREAVAGASTLFAQ-DEYTQEQVQFVNNRNF-NYKPNQLPNHY 308

Query: 198 HPSNRNHENFSYANNKNVLNPPDFTPNQ--ESKQSLEDLVGAFIVESSNRSNKLEEVVIA 257
           HP  RNHENFSYANN+NVL PP     Q  E K S+EDL+  FIVE+  R NK E  +  
Sbjct: 309 HPGLRNHENFSYANNRNVLQPPPGFNQQVVEKKPSVEDLLSTFIVETRGRFNKDEARLDN 368

Query: 258 INTTVN 262
           I T  N
Sbjct: 369 IETHYN 372

BLAST of Lag0015638 vs. NCBI nr
Match: XP_024032903.1 (uncharacterized protein LOC112095347 [Morus notabilis])

HSP 1 Score: 76.6 bits (187), Expect = 3.5e-10
Identity = 56/125 (44.80%), Postives = 71/125 (56.80%), Query Frame = 0

Query: 139 AAAMELRRQREAEGTGSVQSIESAAVLASQTQEENIEQVQYVSNYNYRGYNNNSTPTHYH 198
           A   E+      E + S +++  A+ L +Q  E   EQVQ+V+N N+  Y  N  P HYH
Sbjct: 233 AGIHEIAALTNREASSSREAVAGASRLFAQ-DEYTQEQVQFVNNRNF-NYRPNQLPNHYH 292

Query: 199 PSNRNHENFSYANNKNVLNPPDFTPNQ--ESKQSLEDLVGAFIVESSNRSNKLEEVVIAI 258
           P  RNHENFSYANN+NVL PP     Q  E K S+EDL+  FIVE+  R NK E  +  I
Sbjct: 293 PGLRNHENFSYANNRNVLQPPSGFNQQVVEKKPSVEDLLSTFIVETRGRFNKDEARLDNI 352

Query: 259 NTTVN 262
            T  N
Sbjct: 353 ETHCN 355

BLAST of Lag0015638 vs. NCBI nr
Match: PON37662.1 (LOW QUALITY PROTEIN: hypothetical protein TorRG33x02_346970 [Trema orientale])

HSP 1 Score: 75.9 bits (185), Expect = 6.0e-10
Identity = 54/119 (45.38%), Postives = 73/119 (61.34%), Query Frame = 0

Query: 148 REAEGTGSVQSIESAAVLASQTQEENIEQVQYVS--NYNYRGYN-NNSTPTHYHPSNRNH 207
           REA+ +     + +A+         ++EQV Y++  N+NYRG N +N+ PTHYHP  RNH
Sbjct: 46  REAQSSREPMGVSNASF---GNDGGDLEQVNYLNNWNFNYRGNNMSNNLPTHYHPVLRNH 105

Query: 208 ENFSYANNKNVLNPP-DFT-PNQESKQSLEDLVGAFIVESSNRSNKLEEVVIAINTTVN 262
           ENFSYANN+NVL PP  F  P  E K SL+D++  FI+E+  R NK E  +  I T  N
Sbjct: 106 ENFSYANNRNVLQPPLGFNQPVAEKKPSLKDILSTFIMETKGRFNKDEARIDNIETHCN 161

BLAST of Lag0015638 vs. NCBI nr
Match: XP_024017305.1 (uncharacterized protein LOC112090376 [Morus notabilis])

HSP 1 Score: 75.1 bits (183), Expect = 1.0e-09
Identity = 53/126 (42.06%), Postives = 72/126 (57.14%), Query Frame = 0

Query: 138 AAAAMELRRQREAEGTGSVQSIESAAVLASQTQEENIEQVQYVSNYNYRGYNNNSTPTHY 197
           +A + ++      E + S +++  A+ L +   E   EQVQ+V+N N+  Y  N  P HY
Sbjct: 143 SALSNQIAALTNREASSSREAVAGASTLFAH-DEYTQEQVQFVNNRNF-NYRPNQLPNHY 202

Query: 198 HPSNRNHENFSYANNKNVLNPPDFTPNQ--ESKQSLEDLVGAFIVESSNRSNKLEEVVIA 257
           HP  RNHENFSYANN+N+L PP     Q  E K S+EDL+  FIVE+  R NK E  +  
Sbjct: 203 HPGLRNHENFSYANNRNILQPPPGFNQQEVEKKPSMEDLLSTFIVETRGRFNKDETRLDN 262

Query: 258 INTTVN 262
           I T  N
Sbjct: 263 IETHCN 266

BLAST of Lag0015638 vs. ExPASy TrEMBL
Match: A0A2P5B7D3 (Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_330330 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.6e-11
Identity = 50/94 (53.19%), Postives = 64/94 (68.09%), Query Frame = 0

Query: 173 NIEQVQYVS--NYNYRGYN-NNSTPTHYHPSNRNHENFSYANNKNVLNPPD--FTPNQES 232
           ++EQV Y++  N+NY+G N +N+ PTHYHPS RNHENFSYANN+NVL PP     P  E 
Sbjct: 96  DLEQVNYLNNQNFNYQGNNMSNNLPTHYHPSLRNHENFSYANNRNVLQPPPGLNLPVVEK 155

Query: 233 KQSLEDLVGAFIVESSNRSNKLEEVVIAINTTVN 262
           K SLED++  FI+E+  R NK E  +  I T  N
Sbjct: 156 KPSLEDILSTFILETRGRFNKDEARLDNIETHCN 189

BLAST of Lag0015638 vs. ExPASy TrEMBL
Match: A0A2P5AMA4 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_346970 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.9e-10
Identity = 54/119 (45.38%), Postives = 73/119 (61.34%), Query Frame = 0

Query: 148 REAEGTGSVQSIESAAVLASQTQEENIEQVQYVS--NYNYRGYN-NNSTPTHYHPSNRNH 207
           REA+ +     + +A+         ++EQV Y++  N+NYRG N +N+ PTHYHP  RNH
Sbjct: 46  REAQSSREPMGVSNASF---GNDGGDLEQVNYLNNWNFNYRGNNMSNNLPTHYHPVLRNH 105

Query: 208 ENFSYANNKNVLNPP-DFT-PNQESKQSLEDLVGAFIVESSNRSNKLEEVVIAINTTVN 262
           ENFSYANN+NVL PP  F  P  E K SL+D++  FI+E+  R NK E  +  I T  N
Sbjct: 106 ENFSYANNRNVLQPPLGFNQPVAEKKPSLKDILSTFIMETKGRFNKDEARIDNIETHCN 161

BLAST of Lag0015638 vs. ExPASy TrEMBL
Match: A0A803PT47 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 3.2e-09
Identity = 51/117 (43.59%), Postives = 70/117 (59.83%), Query Frame = 0

Query: 151 EGTGSVQSIESAAVLASQTQEENIEQVQYVS----NYNYRGYNNNSTPTHYHPSNRNHEN 210
           + T +V+++ +A+   SQ  E +IEQ QY++    N NYRG   N  P +YHP  RNHEN
Sbjct: 250 KNTSTVENVVAAS--TSQGPEMSIEQAQYMAYKTYNNNYRG---NPMPNYYHPGLRNHEN 309

Query: 211 FSYANNKNVLNPPD--FTPNQESKQSLEDLVGAFIVESSNRSNKLEEVVIAINTTVN 262
            SY N KNVL  P    T  QE K+ LED++G F++ES  R NK E  +  I T ++
Sbjct: 310 LSYGNTKNVLQLPSGFNTQQQEDKKYLEDILGTFMIESKKRFNKNEARLNNIETHIS 361

BLAST of Lag0015638 vs. ExPASy TrEMBL
Match: A0A803P9R0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 3.2e-09
Identity = 49/114 (42.98%), Postives = 71/114 (62.28%), Query Frame = 0

Query: 151 EGTGSVQSIESAAVLASQTQEENIEQVQYVSNYNY-RGYNNNSTPTHYHPSNRNHENFSY 210
           + T +V+++ +A+   SQ  + +IEQ QY++N  Y   Y  N  P +YHP  RNHEN SY
Sbjct: 22  KNTSTVENVVAAS--TSQGPKMSIEQAQYMANEPYNNNYQGNPMPNYYHPGLRNHENLSY 81

Query: 211 ANNKNVLN-PPDFTPNQE-SKQSLEDLVGAFIVESSNRSNKLEEVVIAINTTVN 262
            N KN+L  PP F   Q+  K+SLED++G F++ESS R NK E  +  I T ++
Sbjct: 82  GNTKNLLQPPPGFNAQQQPEKKSLEDILGTFMMESSKRFNKNEVRLENIETHIS 133

BLAST of Lag0015638 vs. ExPASy TrEMBL
Match: A0A2P5B1T0 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_279370 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.6e-08
Identity = 45/100 (45.00%), Postives = 58/100 (58.00%), Query Frame = 0

Query: 173 NIEQVQYVS--NYNYRGYNN-NSTPTHYHPSNRNHENFSYANNKNVLNPPDFTPNQ--ES 232
           ++ QV Y++  N+NYRG N  N+ PTHYHP   NHENFSY NN+NVL PP        E 
Sbjct: 69  DLGQVNYLNNWNFNYRGNNMLNNLPTHYHPGLCNHENFSYTNNRNVLQPPSGLNQSVAEK 128

Query: 233 KQSLEDLVGAFIVESSNRSNKLEEVVIAINTTVNGHSVAI 268
           K SLED++  FI+E+  R  K E  +  I    N  +  I
Sbjct: 129 KPSLEDILSTFIMETRGRFKKYEACLDNIENHCNNMNATI 168

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PON44675.15.4e-1153.19hypothetical protein TorRG33x02_330330, partial [Trema orientale][more]
XP_024020480.12.7e-1043.65uncharacterized protein LOC112091333 [Morus notabilis][more]
XP_024032903.13.5e-1044.80uncharacterized protein LOC112095347 [Morus notabilis][more]
PON37662.16.0e-1045.38LOW QUALITY PROTEIN: hypothetical protein TorRG33x02_346970 [Trema orientale][more]
XP_024017305.11.0e-0942.06uncharacterized protein LOC112090376 [Morus notabilis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2P5B7D32.6e-1153.19Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_330... [more]
A0A2P5AMA42.9e-1045.38Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_346970 PE=4 SV... [more]
A0A803PT473.2e-0943.59Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803P9R03.2e-0942.98Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A2P5B1T04.6e-0845.00Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_279370 PE... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..137

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0015638.1Lag0015638.1mRNA