Lag0015637 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0015637
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Plant transposase
Location	chr12: 18303007 .. 18304807 (-)
RNA-Seq Expression	Lag0015637
Synteny	Lag0015637

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGAAATGAGATCCATGATGTCATGTTTTGTAAAGAAACCGGTAATTTTTTTTTATTATTATTATTAAAGTTAGCTTAAGTTCATAATCTGTGTTTTTAGAGTACTTTAAGCAATGTTTCATCTCAAATTATTATAGGGCGAACAAAGTGAAGAACTTTCAAATGCCACTGCAAGTGTACCTAAGCCAACAAATATTCCTTCAACTATTCCCATACCTTCTTCACCGGTAAACTTATTTTTGTAAAGTGATGAATAATGTTATTGATTTTTTTACTATCCAATTTTCATATCTTACAATGTTTTTTTTTTTTCTTATAAAGAGTATTAATAATAATACTCAAATTATTAAGTGCAAGTTATTAGATTGGCTTGGTTCGAGAGAGATAGTTGCAGAAGGACGATGGTCTTCTAATGATCCAACTGCTCTTGTTCATCATATTCCTCTTGGACAACATGCAATTAGAGTATGGATTGATGTATCAAAGAAACCCAATGCATATTTGTGGAGGCCTACATCAGAGATGACATGTATTGAAGAAGCTATGGGTAGTACAGTTGCATGGCCATCTGACAAAGTGACTATTTGTATGTTATTTTCTAGGTCTATTTATTTATATTTAAGAAATAATCTCTTTATTTAGTTTAATTATATTTGTATTCATATATTTTGTTTTATATATTTATGTAGGTGAATGAAATGATACTTTTACACAAGCAAAAGGATCAATGATGGCATCTTCAACATTTTTTGAATTTTCTATTTTGTGAACTTATCAAAGGTGGCATCTTCAACATATTGTGAATTTTCTATTTTGTGAACTAACTTTGTTGGAAACTAGGATTAAGTGAACATTTTATCTTTTGTTGGTAACTACATTCTATATTTTAGGAAGCTATTTGCTACTTTATTTTGTAATGTAAATAGACTGTGAAATTTCAATTATGAAAGGAAATCATAGTATTTAATGTGTTATGAATTTTATGTGTGTGGGTTTAGCTAGAAACAAGTGCTTAGAGTAAATTTTATTAAAATTGAACAAGTTCAAATAATAGAATGAATTGTAATTTATTATTTATGCAAAGAAAATTAATGTTGAGAAAAAAGTTAATACTTTTTATAGCCATAAGTAAAAACTATAACAAAATTTACATAACGAAAATAAAATGCTATGAAAAAGTTATTATGAGATTTAATAAGTTTATTATAGCACACGATTGAAGCTACTGATACAATATAATAGGATTACTAAAACGCTATTATATGTTAAAGATAGCGCAAAATTTTAGCTATATTAACATATTATAGCTTTAATAAGAAAACGCTATAAAATGTTTTCATAGCAGCGCATATAAGCTATAACTCCGTAATCTATTATAGCATCCGTTATAGCTATATAAAAACGCGATAAAAAGTCTTAGACTTTTAATAACATGAGCTGTCAGGACCTTCACAAAAAGGCTATAAAAGACCTTTTATAGCGTTTTTCGTTAGCTATCATATCCGTTATTTCCTGCAGTGAAACTCTTCTCACTGTAGAACATTCATGTGTCCACAAATATAGACTTATACCGGTAAGTCAATCCTTCACGAGTGTCCGTAATCACAGTTGGGTCAACTTATCGTTTTACCCTTGTGTTACATCTGTCTCCTTAAGTACCAGTGCTCCTCTAATGAACAACTTGTTTATGGTCCAACCAATAAACAGAAAGTTCCTCTCGGGCCAGTGAGAGGACAGGATCCCTTTGTTCAAGCCCCGGAGTCACCACTTAAGGGAACACTCATGTACTTCTCCTAA

mRNA sequence

ATGATGGAAATGAGATCCATGATGTCATGTTTTGTAAAGAAACCGGGCGAACAAAGTGAAGAACTTTCAAATGCCACTGCAAGTGTACCTAAGCCAACAAATATTCCTTCAACTATTCCCATACCTTCTTCACCGAGTATTAATAATAATACTCAAATTATTAAGTGCAAGTTATTAGATTGGCTTGGTTCGAGAGAGATAGTTGCAGAAGGACGATGGTCTTCTAATGATCCAACTGCTCTTGTTCATCATATTCCTCTTGGACAACATGCAATTAGAGTATGGATTGATGTATCAAAGAAACCCAATGCATATTTGTGGAGGCCTACATCAGAGATGACATGTATTGAAGAAGCTATGGGTAGTACAGTTGCATGGCCATCTGACAAAGTGACTATTTCTATCATATCCGTTATTTCCTGCAGTGAAACTCTTCTCACTGTAGAACATTCATGTGTCCACAAATATAGACTTATACCGTGCTCCTCTAATGAACAACTTGTTTATGGTCCAACCAATAAACAGAAAGTTCCTCTCGGGCCAGTGAGAGGACAGGATCCCTTTGTTCAAGCCCCGGAGTCACCACTTAAGGGAACACTCATGTACTTCTCCTAA

Coding sequence (CDS)

ATGATGGAAATGAGATCCATGATGTCATGTTTTGTAAAGAAACCGGGCGAACAAAGTGAAGAACTTTCAAATGCCACTGCAAGTGTACCTAAGCCAACAAATATTCCTTCAACTATTCCCATACCTTCTTCACCGAGTATTAATAATAATACTCAAATTATTAAGTGCAAGTTATTAGATTGGCTTGGTTCGAGAGAGATAGTTGCAGAAGGACGATGGTCTTCTAATGATCCAACTGCTCTTGTTCATCATATTCCTCTTGGACAACATGCAATTAGAGTATGGATTGATGTATCAAAGAAACCCAATGCATATTTGTGGAGGCCTACATCAGAGATGACATGTATTGAAGAAGCTATGGGTAGTACAGTTGCATGGCCATCTGACAAAGTGACTATTTCTATCATATCCGTTATTTCCTGCAGTGAAACTCTTCTCACTGTAGAACATTCATGTGTCCACAAATATAGACTTATACCGTGCTCCTCTAATGAACAACTTGTTTATGGTCCAACCAATAAACAGAAAGTTCCTCTCGGGCCAGTGAGAGGACAGGATCCCTTTGTTCAAGCCCCGGAGTCACCACTTAAGGGAACACTCATGTACTTCTCCTAA

Protein sequence

MMEMRSMMSCFVKKPGEQSEELSNATASVPKPTNIPSTIPIPSSPSINNNTQIIKCKLLDWLGSREIVAEGRWSSNDPTALVHHIPLGQHAIRVWIDVSKKPNAYLWRPTSEMTCIEEAMGSTVAWPSDKVTISIISVISCSETLLTVEHSCVHKYRLIPCSSNEQLVYGPTNKQKVPLGPVRGQDPFVQAPESPLKGTLMYFS

Homology

[Close]

BLAST of Lag0015637 vs. NCBI nr
Match: TYK07512.1 (uncharacterized protein E5676_scaffold1702G00300 [Cucumis melo var. makuwa] >TYK21220.1 uncharacterized protein E5676_scaffold359G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 206.1 bits (523), Expect = 2.9e-49
Identity = 103/134 (76.87%), Postives = 115/134 (85.82%), Query Frame = 0


Query: 1    MMEMRSMMSCFVKKPGEQSEELSNATASVPKPTNIPSTIPIPSSPSINNNTQIIKCKLLD 60
            M+EM+++M  ++KK  E SEELSNATASV K  NIP   P+PS  SINNN+Q  KCKLLD
Sbjct: 1201 MIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIP---PMPSPSSINNNSQ-TKCKLLD 1260

Query: 61   WLGSREIVAEGRWSSNDPTALVHHIPLGQHAIRVWIDVSKKPNAYLWRPTSEMTCIEEAM 120
            W GS EIVAEGRWSSNDPTA+VHHIP+G HAIRVWIDV+KKPNAYLWRPTSEMTCIEEA+
Sbjct: 1261 WYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPTSEMTCIEEAL 1320

Query: 121  GSTVAWPSDKVTIS 135
            GSTVAWPSDKV IS
Sbjct: 1321 GSTVAWPSDKVIIS 1330

[Close]

BLAST of Lag0015637 vs. NCBI nr
Match: KAA0036985.1 (uncharacterized protein E6C27_scaffold86G00660 [Cucumis melo var. makuwa])

HSP 1 Score: 206.1 bits (523), Expect = 2.9e-49
Identity = 103/134 (76.87%), Postives = 115/134 (85.82%), Query Frame = 0


Query: 1    MMEMRSMMSCFVKKPGEQSEELSNATASVPKPTNIPSTIPIPSSPSINNNTQIIKCKLLD 60
            M+EM+++M  ++KK  E SEELSNATASV K  NIP   P+PS  SINNN+Q  KCKLLD
Sbjct: 1238 MIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIP---PMPSPSSINNNSQ-TKCKLLD 1297

Query: 61   WLGSREIVAEGRWSSNDPTALVHHIPLGQHAIRVWIDVSKKPNAYLWRPTSEMTCIEEAM 120
            W GS EIVAEGRWSSNDPTA+VHHIP+G HAIRVWIDV+KKPNAYLWRPTSEMTCIEEA+
Sbjct: 1298 WYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPTSEMTCIEEAL 1357

Query: 121  GSTVAWPSDKVTIS 135
            GSTVAWPSDKV IS
Sbjct: 1358 GSTVAWPSDKVIIS 1367

[Close]

BLAST of Lag0015637 vs. NCBI nr
Match: TYK08453.1 (uncharacterized protein E5676_scaffold654G00690 [Cucumis melo var. makuwa])

HSP 1 Score: 206.1 bits (523), Expect = 2.9e-49
Identity = 103/134 (76.87%), Postives = 115/134 (85.82%), Query Frame = 0


Query: 1    MMEMRSMMSCFVKKPGEQSEELSNATASVPKPTNIPSTIPIPSSPSINNNTQIIKCKLLD 60
            M+EM+++M  ++KK  E SEELSNATASV K  NIP   P+PS  SINNN+Q  KCKLLD
Sbjct: 1266 MIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIP---PMPSPSSINNNSQ-TKCKLLD 1325

Query: 61   WLGSREIVAEGRWSSNDPTALVHHIPLGQHAIRVWIDVSKKPNAYLWRPTSEMTCIEEAM 120
            W GS EIVAEGRWSSNDPTA+VHHIP+G HAIRVWIDV+KKPNAYLWRPTSEMTCIEEA+
Sbjct: 1326 WYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPTSEMTCIEEAL 1385

Query: 121  GSTVAWPSDKVTIS 135
            GSTVAWPSDKV IS
Sbjct: 1386 GSTVAWPSDKVIIS 1395

[Close]

BLAST of Lag0015637 vs. NCBI nr
Match: TYK25923.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 206.1 bits (523), Expect = 2.9e-49
Identity = 103/134 (76.87%), Postives = 115/134 (85.82%), Query Frame = 0


Query: 1   MMEMRSMMSCFVKKPGEQSEELSNATASVPKPTNIPSTIPIPSSPSINNNTQIIKCKLLD 60
           M+EM+++M  ++KK  E SEELSNATASV K  NIP   P+PS  SINNN+Q  KCKLLD
Sbjct: 197 MIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIP---PMPSPSSINNNSQ-TKCKLLD 256

Query: 61  WLGSREIVAEGRWSSNDPTALVHHIPLGQHAIRVWIDVSKKPNAYLWRPTSEMTCIEEAM 120
           W GS EIVAEGRWSSNDPTA+VHHIP+G HAIRVWIDV+KKPNAYLWRPTSEMTCIEEA+
Sbjct: 257 WYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPTSEMTCIEEAL 316

Query: 121 GSTVAWPSDKVTIS 135
           GSTVAWPSDKV IS
Sbjct: 317 GSTVAWPSDKVIIS 326

[Close]

BLAST of Lag0015637 vs. NCBI nr
Match: TYK24342.1 (uncharacterized protein E5676_scaffold205G001200 [Cucumis melo var. makuwa])

HSP 1 Score: 204.9 bits (520), Expect = 6.6e-49
Identity = 101/134 (75.37%), Postives = 115/134 (85.82%), Query Frame = 0


Query: 1    MMEMRSMMSCFVKKPGEQSEELSNATASVPKPTNIPSTIPIPSSPSINNNTQIIKCKLLD 60
            M+EM+++M  ++KK  E SEELSNATAS+ K  NIP   P+PS  SINNN+Q  KCKLLD
Sbjct: 1266 MIEMKALMLSYLKKQTEPSEELSNATASMLKRLNIP---PMPSPSSINNNSQ-TKCKLLD 1325

Query: 61   WLGSREIVAEGRWSSNDPTALVHHIPLGQHAIRVWIDVSKKPNAYLWRPTSEMTCIEEAM 120
            W GS EIVAEGRWSSNDPTALVHH+P+G HAIRVW+DV+KKPNAYLWRPTSEMTCIEEA+
Sbjct: 1326 WYGSGEIVAEGRWSSNDPTALVHHVPIGPHAIRVWVDVAKKPNAYLWRPTSEMTCIEEAL 1385

Query: 121  GSTVAWPSDKVTIS 135
            GSTVAWPSDKV IS
Sbjct: 1386 GSTVAWPSDKVIIS 1395

[Close]

BLAST of Lag0015637 vs. ExPASy TrEMBL
Match: A0A5D3DCM2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1702G00300 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 1.4e-49
Identity = 103/134 (76.87%), Postives = 115/134 (85.82%), Query Frame = 0


Query: 1    MMEMRSMMSCFVKKPGEQSEELSNATASVPKPTNIPSTIPIPSSPSINNNTQIIKCKLLD 60
            M+EM+++M  ++KK  E SEELSNATASV K  NIP   P+PS  SINNN+Q  KCKLLD
Sbjct: 1201 MIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIP---PMPSPSSINNNSQ-TKCKLLD 1260

Query: 61   WLGSREIVAEGRWSSNDPTALVHHIPLGQHAIRVWIDVSKKPNAYLWRPTSEMTCIEEAM 120
            W GS EIVAEGRWSSNDPTA+VHHIP+G HAIRVWIDV+KKPNAYLWRPTSEMTCIEEA+
Sbjct: 1261 WYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPTSEMTCIEEAL 1320

Query: 121  GSTVAWPSDKVTIS 135
            GSTVAWPSDKV IS
Sbjct: 1321 GSTVAWPSDKVIIS 1330

[Close]

BLAST of Lag0015637 vs. ExPASy TrEMBL
Match: A0A5A7T672 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00660 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 1.4e-49
Identity = 103/134 (76.87%), Postives = 115/134 (85.82%), Query Frame = 0


Query: 1    MMEMRSMMSCFVKKPGEQSEELSNATASVPKPTNIPSTIPIPSSPSINNNTQIIKCKLLD 60
            M+EM+++M  ++KK  E SEELSNATASV K  NIP   P+PS  SINNN+Q  KCKLLD
Sbjct: 1238 MIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIP---PMPSPSSINNNSQ-TKCKLLD 1297

Query: 61   WLGSREIVAEGRWSSNDPTALVHHIPLGQHAIRVWIDVSKKPNAYLWRPTSEMTCIEEAM 120
            W GS EIVAEGRWSSNDPTA+VHHIP+G HAIRVWIDV+KKPNAYLWRPTSEMTCIEEA+
Sbjct: 1298 WYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPTSEMTCIEEAL 1357

Query: 121  GSTVAWPSDKVTIS 135
            GSTVAWPSDKV IS
Sbjct: 1358 GSTVAWPSDKVIIS 1367

[Close]

BLAST of Lag0015637 vs. ExPASy TrEMBL
Match: A0A5D3DQI7 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold190G00150 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 1.4e-49
Identity = 103/134 (76.87%), Postives = 115/134 (85.82%), Query Frame = 0


Query: 1   MMEMRSMMSCFVKKPGEQSEELSNATASVPKPTNIPSTIPIPSSPSINNNTQIIKCKLLD 60
           M+EM+++M  ++KK  E SEELSNATASV K  NIP   P+PS  SINNN+Q  KCKLLD
Sbjct: 197 MIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIP---PMPSPSSINNNSQ-TKCKLLD 256

Query: 61  WLGSREIVAEGRWSSNDPTALVHHIPLGQHAIRVWIDVSKKPNAYLWRPTSEMTCIEEAM 120
           W GS EIVAEGRWSSNDPTA+VHHIP+G HAIRVWIDV+KKPNAYLWRPTSEMTCIEEA+
Sbjct: 257 WYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPTSEMTCIEEAL 316

Query: 121 GSTVAWPSDKVTIS 135
           GSTVAWPSDKV IS
Sbjct: 317 GSTVAWPSDKVIIS 326

[Close]

BLAST of Lag0015637 vs. ExPASy TrEMBL
Match: A0A5D3C984 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00690 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 1.4e-49
Identity = 103/134 (76.87%), Postives = 115/134 (85.82%), Query Frame = 0


Query: 1    MMEMRSMMSCFVKKPGEQSEELSNATASVPKPTNIPSTIPIPSSPSINNNTQIIKCKLLD 60
            M+EM+++M  ++KK  E SEELSNATASV K  NIP   P+PS  SINNN+Q  KCKLLD
Sbjct: 1266 MIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIP---PMPSPSSINNNSQ-TKCKLLD 1325

Query: 61   WLGSREIVAEGRWSSNDPTALVHHIPLGQHAIRVWIDVSKKPNAYLWRPTSEMTCIEEAM 120
            W GS EIVAEGRWSSNDPTA+VHHIP+G HAIRVWIDV+KKPNAYLWRPTSEMTCIEEA+
Sbjct: 1326 WYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPTSEMTCIEEAL 1385

Query: 121  GSTVAWPSDKVTIS 135
            GSTVAWPSDKV IS
Sbjct: 1386 GSTVAWPSDKVIIS 1395

[Close]

BLAST of Lag0015637 vs. ExPASy TrEMBL
Match: A0A5D3DLF1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001200 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 3.2e-49
Identity = 101/134 (75.37%), Postives = 115/134 (85.82%), Query Frame = 0


Query: 1    MMEMRSMMSCFVKKPGEQSEELSNATASVPKPTNIPSTIPIPSSPSINNNTQIIKCKLLD 60
            M+EM+++M  ++KK  E SEELSNATAS+ K  NIP   P+PS  SINNN+Q  KCKLLD
Sbjct: 1266 MIEMKALMLSYLKKQTEPSEELSNATASMLKRLNIP---PMPSPSSINNNSQ-TKCKLLD 1325

Query: 61   WLGSREIVAEGRWSSNDPTALVHHIPLGQHAIRVWIDVSKKPNAYLWRPTSEMTCIEEAM 120
            W GS EIVAEGRWSSNDPTALVHH+P+G HAIRVW+DV+KKPNAYLWRPTSEMTCIEEA+
Sbjct: 1326 WYGSGEIVAEGRWSSNDPTALVHHVPIGPHAIRVWVDVAKKPNAYLWRPTSEMTCIEEAL 1385

Query: 121  GSTVAWPSDKVTIS 135
            GSTVAWPSDKV IS
Sbjct: 1386 GSTVAWPSDKVIIS 1395

The following BLAST results are available for this feature:

BLAST of Lag0015637 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK07512.1	2.9e-49	76.87	uncharacterized protein E5676_scaffold1702G00300 [Cucumis melo var. makuwa] >TYK...	[more]
KAA0036985.1	2.9e-49	76.87	uncharacterized protein E6C27_scaffold86G00660 [Cucumis melo var. makuwa]	[more]
TYK08453.1	2.9e-49	76.87	uncharacterized protein E5676_scaffold654G00690 [Cucumis melo var. makuwa]	[more]
TYK25923.1	2.9e-49	76.87	Plant transposase [Cucumis melo var. makuwa]	[more]
TYK24342.1	6.6e-49	75.37	uncharacterized protein E5676_scaffold205G001200 [Cucumis melo var. makuwa]	[more]

BLAST of Lag0015637 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0015637 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DCM2	1.4e-49	76.87	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7T672	1.4e-49	76.87	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DQI7	1.4e-49	76.87	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold190G00...	[more]
A0A5D3C984	1.4e-49	76.87	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DLF1	3.2e-49	75.37	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Lag0015637 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004264	Transposase, Tnp1/En/Spm-like	PFAM	PF03017	Transposase_23	coord: 58..120 e-value: 5.2E-5 score: 23.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..42

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0015637.1	Lag0015637.1	mRNA